IVF0017328 (gene) Melon (IVF77) v1

Overview


Name	IVF0017328
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	LINE-1 retrotransposable element ORF2 protein
Location	chr09: 5977433 .. 5979138 (+)
RNA-Seq Expression	IVF0017328
Synteny	IVF0017328

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTACCTTAGCAGGCTCTTAAGTCATTTGGAGTCCTCTGGTGCCATCAAAGGGGTGTGCCTCGCCAATGATTGCAACATATCCCATATCCTCTTCGCTGATGATATTCTACTTTTTGTAGAAGATAATGACCACTTTCTGAATAATCTTAGAATGGCTCTTTCTCTGTTTGAAAAGGCCTCAGGGCTCAAAATTAATTTGTCAAAATCAGCTATGGTTCCAGTTAATGTTTCCTGGTCAAGAGCTTTGGAGTGTGCTTCTTCTTGGGGTATTTCGTGCCACACTCTTCCTCTTACATACTTAGGAGTCCCCCTTGGTGGCAACCCAAAATCCAACATTTTCTGGAGGAATATTGAGGACAGAATCCAAAAAAAGCTTAACAACTGGAAATATGCCCACATCTCAAAAGGTGGAAGACTCACGCTAATCAAGTCTACTCTAAGTAGTCTCTCAATTTATCAACTCTCTGTCTTCCAAGCTCCACCCTCCACGTATAAAAACATCGAAAAACTTTGGAGAAATTTCCTTTGGAAAGGTAGCTTCGGTCTAAAAGGGTCTCACTTAATCAACTGGTCAATAGTGACTAAGCTTAAGGAGGAGGGTGGGCTGGGTATCTCGAGACTCCAAGTAATAAATCAAGCTCTCTTATCTAAGTGGCTTTGGCGCTACTATTCGGAGCCTAATTCCCTTTGGAGGAGGTTAATCCATATCAAGTATAAAGGTAAACACCCAGGGGACATCCCATCAAACATTTCCTCTAGCTCCTCTAAAGCCCCGTGGAAATCTATCATCAACAACATTGATTGGTTCAAAAGTAATCAAGGTTGGGACTTGAACAATGAAGATCAAATCTCCTTCTGGTATTCTAACTGGTCTCCAGAAGGATGTCTCTCTACTGCCTATCCCAGACTTTTTGCCCTCTCCATCGACAAAAAATCCTCAATCAAAGATGTGTGGAACTCAAACAACAATCAATGGGAAATAACTTTTAGAAGAAAGTTGAATGATAGAGAACTTAGCACCTGGCAGAATATTTTAGAGAATCTTTCTATTCCGAGAACTAATAGAGGGCCAAGTAAACCTACCTGGATTCCCGACAGCAAGAAATTCTTCTCCATCGCCTCTGCTAAAAGTTGTATCTCCCATCAGCCCGATCGATCGGTAGCGAATCCTCGAGTAAAGCTGCTTGATTTAATTTGGAAAACTCACGTTCCTATGAAGATAAAATTCTTCATGTGGTGCCTGGTTTAAAGAAAGTTAAACACTATGGAGGTTATTCAGCAAAGAATGCCAAATACGCTTCTCCAACCTAATTGGTGCGTTCTCTGCAAAAAAGAAAGCGAAACGGGAGCTCACCTTTTCCTTCACTGTGATCTGGTGAAGCCCCTGTGGTCCCTCCTCCATCGATATCTCAATTTCGCGCCCATTTCCGACGACTTTGAAGCGATGTTCTCCTTCTTCCTCTCCCTAAACCAATCCCTCCCGAAACACAAGGTCGTTTTTTGCGGGCTGATAGCAATTCTTTGGGGTATTTGGACAGAGAGAAATAATAGAATTTTTGATACTTTAAGTTATCAAAAATCTATTGCTAACTTATGGGAAGACTGAAAAATTCTCATAGGAAATTGGTGTAGTAGAGATCCTACTTTCAAAATTATTCAGCAGCTACTATTGCTCTTAATCTTAGCGCCTTCTGTAATTAG

mRNA sequence

ATGGATTACCTTAGCAGGCTCTTAAGTCATTTGGAGTCCTCTGGTGCCATCAAAGGGGTGTGCCTCGCCAATGATTGCAACATATCCCATATCCTCTTCGCTGATGATATTCTACTTTTTGTAGAAGATAATGACCACTTTCTGAATAATCTTAGAATGGCTCTTTCTCTGTTTGAAAAGGCCTCAGGGCTCAAAATTAATTTGTCAAAATCAGCTATGGTTCCAGTTAATGTTTCCTGGTCAAGAGCTTTGGAGTGTGCTTCTTCTTGGGGTATTTCGTGCCACACTCTTCCTCTTACATACTTAGGAGTCCCCCTTGGTGGCAACCCAAAATCCAACATTTTCTGGAGGAATATTGAGGACAGAATCCAAAAAAAGCTTAACAACTGGAAATATGCCCACATCTCAAAAGGTGGAAGACTCACGCTAATCAAGTCTACTCTAAGTAGTCTCTCAATTTATCAACTCTCTGTCTTCCAAGCTCCACCCTCCACGTATAAAAACATCGAAAAACTTTGGAGAAATTTCCTTTGGAAAGGTAGCTTCGGTCTAAAAGGGTCTCACTTAATCAACTGGTCAATAGTGACTAAGCTTAAGGAGGAGGGTGGGCTGGGTATCTCGAGACTCCAAGTAATAAATCAAGCTCTCTTATCTAAGTGGCTTTGGCGCTACTATTCGGAGCCTAATTCCCTTTGGAGGAGGTTAATCCATATCAAGTATAAAGGTAAACACCCAGGGGACATCCCATCAAACATTTCCTCTAGCTCCTCTAAAGCCCCGTGGAAATCTATCATCAACAACATTGATTGGTTCAAAAGTAATCAAGGTTGGGACTTGAACAATGAAGATCAAATCTCCTTCTGGTATTCTAACTGGTCTCCAGAAGGATCAGCTACTATTGCTCTTAATCTTAGCGCCTTCTGTAATTAG

Coding sequence (CDS)

ATGGATTACCTTAGCAGGCTCTTAAGTCATTTGGAGTCCTCTGGTGCCATCAAAGGGGTGTGCCTCGCCAATGATTGCAACATATCCCATATCCTCTTCGCTGATGATATTCTACTTTTTGTAGAAGATAATGACCACTTTCTGAATAATCTTAGAATGGCTCTTTCTCTGTTTGAAAAGGCCTCAGGGCTCAAAATTAATTTGTCAAAATCAGCTATGGTTCCAGTTAATGTTTCCTGGTCAAGAGCTTTGGAGTGTGCTTCTTCTTGGGGTATTTCGTGCCACACTCTTCCTCTTACATACTTAGGAGTCCCCCTTGGTGGCAACCCAAAATCCAACATTTTCTGGAGGAATATTGAGGACAGAATCCAAAAAAAGCTTAACAACTGGAAATATGCCCACATCTCAAAAGGTGGAAGACTCACGCTAATCAAGTCTACTCTAAGTAGTCTCTCAATTTATCAACTCTCTGTCTTCCAAGCTCCACCCTCCACGTATAAAAACATCGAAAAACTTTGGAGAAATTTCCTTTGGAAAGGTAGCTTCGGTCTAAAAGGGTCTCACTTAATCAACTGGTCAATAGTGACTAAGCTTAAGGAGGAGGGTGGGCTGGGTATCTCGAGACTCCAAGTAATAAATCAAGCTCTCTTATCTAAGTGGCTTTGGCGCTACTATTCGGAGCCTAATTCCCTTTGGAGGAGGTTAATCCATATCAAGTATAAAGGTAAACACCCAGGGGACATCCCATCAAACATTTCCTCTAGCTCCTCTAAAGCCCCGTGGAAATCTATCATCAACAACATTGATTGGTTCAAAAGTAATCAAGGTTGGGACTTGAACAATGAAGATCAAATCTCCTTCTGGTATTCTAACTGGTCTCCAGAAGGATCAGCTACTATTGCTCTTAATCTTAGCGCCTTCTGTAATTAG

Protein sequence

MDYLSRLLSHLESSGAIKGVCLANDCNISHILFADDILLFVEDNDHFLNNLRMALSLFEKASGLKINLSKSAMVPVNVSWSRALECASSWGISCHTLPLTYLGVPLGGNPKSNIFWRNIEDRIQKKLNNWKYAHISKGGRLTLIKSTLSSLSIYQLSVFQAPPSTYKNIEKLWRNFLWKGSFGLKGSHLINWSIVTKLKEEGGLGISRLQVINQALLSKWLWRYYSEPNSLWRRLIHIKYKGKHPGDIPSNISSSSSKAPWKSIINNIDWFKSNQGWDLNNEDQISFWYSNWSPEGSATIALNLSAFCN

Homology

[Close]

BLAST of IVF0017328 vs. ExPASy Swiss-Prot
Match: P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 3.0e-24
Identity = 64/178 (35.96%), Postives = 94/178 (52.81%), Query Frame = 0


Query: 119 IEDRIQKKLNNWKYAHISKGGRLTLIKSTLSSLSIYQLSVFQAPPSTYKNIEKLWRNFLW 178
           I +R+  +++ W+   +S  GRLTL K+ LSS+ ++ +S    P S    +++L R FLW
Sbjct: 16  ILERVSSRMSGWREKTLSFAGRLTLTKAVLSSMPVHSMSTILLPQSILNRLDQLSRTFLW 75

Query: 179 KGSFGLKGSHLINWSIVTKLKEEGGLGISRLQVINQALLSKWLWRYYSEPNSLWRRLIHI 238
             +   K  HL+ WS V   K+EGGLG+   + +N+AL+SK  WR   E NSLW  ++  
Sbjct: 76  GSTAEKKKQHLVKWSKVCSPKKEGGLGVRAAKSMNRALISKVGWRLLQEKNSLWTLVLQK 135

Query: 239 KYKGKHPGDIPSN---ISSSSSKAPWKSI-INNIDWFKSNQGWDLNNEDQISFWYSNW 293
           KY   H G+I  +   I   S  + W+SI I   D      GW   +  QI FW   W
Sbjct: 136 KY---HVGEIRDSRWLIPKGSWSSTWRSIAIGLRDVVSHGVGWIPGDGQQIRFWTDRW 190

[Close]

BLAST of IVF0017328 vs. ExPASy Swiss-Prot
Match: O00370 (LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 5.0e-11
Identity = 56/224 (25.00%), Postives = 104/224 (46.43%), Query Frame = 0


Query: 17  IKGVCLANDCNISHILFADDILLFVEDNDHFLNNLRMALSLFEKASGLKINLSKSAMVPV 76
           IKG+ L  +  +   LFADD+++++E+      NL   +S F K SG KIN+ KS     
Sbjct: 685 IKGIQLGKE-EVKLSLFADDMIVYLENPIVSAQNLLKLISNFSKVSGYKINVQKSQAFLY 744

Query: 77  NVSWSRALECASSWGISCHTLPLTYLGVPLGGNPKSNIFWRNIE---DRIQKKLNNWKYA 136
           N +     +       +  +  + YLG+ L  + K ++F  N +     I++  N WK  
Sbjct: 745 NNNRQTESQIMGELPFTIASKRIKYLGIQLTRDVK-DLFKENYKPLLKEIKEDTNKWKNI 804

Query: 137 HISKGGRLTLIKSTLSSLSIYQLSV--FQAPPSTYKNIEKLWRNFLWKGSFGLKGSHLIN 196
             S  GR+ ++K  +    IY+ +    + P + +  +EK    F+W      +    I 
Sbjct: 805 PCSWVGRINIVKMAILPKVIYRFNAIPIKLPMTFFTELEKTTLKFIWN-----QKRARIA 864

Query: 197 WSIVTKLKEEGGLGISRLQVINQALLSKWLWRYYSEPN-SLWRR 235
            SI+++  + GG+ +   ++  +A ++K  W +Y   +   W R
Sbjct: 865 KSILSQKNKAGGITLPDFKLYYKATVTKTAWYWYQNRDIDQWNR 901

[Close]

BLAST of IVF0017328 vs. ExPASy Swiss-Prot
Match: P08548 (LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 2.5e-10
Identity = 54/226 (23.89%), Postives = 107/226 (47.35%), Query Frame = 0


Query: 16  AIKGVCLANDCNISHILFADDILLFVEDNDHFLNNLRMALSLFEKASGLKINLSKSAMVP 75
           AIKG+ + ++  I   LFADD+++++E+       L   +  +   SG KIN  KS    
Sbjct: 683 AIKGIHIGSE-EIKLSLFADDMIVYLENTRDSTTKLLEVIKEYSNVSGYKINTHKSVAFI 742

Query: 76  VNVSWSRALECASSWGISCHTLPLTYLGVPLGGNPKSNIFWRNIE---DRIQKKLNNWKY 135
              +         S   +     + YLGV L  + K +++  N E     I + +N WK 
Sbjct: 743 YTNNNQAEKTVKDSIPFTVVPKKMKYLGVYLTKDVK-DLYKENYETLRKEIAEDVNKWKN 802

Query: 136 AHISKGGRLTLIKSTLSSLSIYQLSV--FQAPPSTYKNIEKLWRNFLWKGSFGLKGSHLI 195
              S  GR+ ++K ++   +IY  +    +AP S +K++EK+  +F+W      +    I
Sbjct: 803 IPCSWLGRINIVKMSILPKAIYNFNAIPIKAPLSYFKDLEKIILHFIWN-----QKKPQI 862

Query: 196 NWSIVTKLKEEGGLGISRLQVINQALLSKWLWRYYSEPN-SLWRRL 236
             ++++   + GG+ +  L++  ++++ K  W ++      +W R+
Sbjct: 863 AKTLLSNKNKAGGITLPDLRLYYKSIVIKTAWYWHKNREVDVWNRI 901

[Close]

BLAST of IVF0017328 vs. ExPASy Swiss-Prot
Match: P93295 (Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 GN=AtMg00310 PE=4 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 1.1e-05
Identity = 39/155 (25.16%), Postives = 66/155 (42.58%), Query Frame = 0


Query: 150 SLSIYQLSVFQAPPSTYKNIEKLWRNFLWKGSFGLKGSHLINWSIVTKLKE-EGGLGISR 209
           +L +Y +S F+      K +      F W      +    + W  + K KE +GGLG   
Sbjct: 2   ALPVYAMSCFRLSKLLCKKLTSAMTEFWWSSCENKRKISWVAWQKLCKSKEDDGGLGFRD 61

Query: 210 LQVINQALLSKWLWRYYSEPNSLWRRLIHIKYKGKHPGDIPSNISSSSSKAPWKSIINNI 269
           L   NQALL+K  +R   +P++L  RL+  +Y   H   +  ++ +  S A W+SII+  
Sbjct: 62  LGWFNQALLAKQSFRIIHQPHTLLSRLLRSRY-FPHSSMMECSVGTRPSYA-WRSIIHGR 121

Query: 270 DWFKSNQGWDLNNEDQISFWYSNWSPEGSATIALN 304
           +         + +      W   W  + +    LN
Sbjct: 122 ELLSRGLLRTIGDGIHTKVWLDRWIMDETPLPPLN 154

[Close]

BLAST of IVF0017328 vs. ExPASy TrEMBL
Match: A0A5D3C3M3 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G003160 PE=4 SV=1)

HSP 1 Score: 616.3 bits (1588), Expect = 6.9e-173
Identity = 297/301 (98.67%), Postives = 298/301 (99.00%), Query Frame = 0


Query: 1    MDYLSRLLSHLESSGAIKGVCLANDCNISHILFADDILLFVEDNDHFLNNLRMALSLFEK 60
            MDYLSRLLSHLESSGAIKGVCLANDCNISHILFADDILLFVEDNDHFLNNLRMALSLFEK
Sbjct: 1058 MDYLSRLLSHLESSGAIKGVCLANDCNISHILFADDILLFVEDNDHFLNNLRMALSLFEK 1117

Query: 61   ASGLKINLSKSAMVPVNVSWSRALECASSWGISCHTLPLTYLGVPLGGNPKSNIFWRNIE 120
            ASGLKINLSKSAMVPVNVSWSRALECASSWGISCHTLPLTYLGVPLGGNPKSNIFWRNIE
Sbjct: 1118 ASGLKINLSKSAMVPVNVSWSRALECASSWGISCHTLPLTYLGVPLGGNPKSNIFWRNIE 1177

Query: 121  DRIQKKLNNWKYAHISKGGRLTLIKSTLSSLSIYQLSVFQAPPSTYKNIEKLWRNFLWKG 180
            DRIQKKLNNWKYAHISKGGRLTLIKSTLSSLSIYQLSVFQAPPSTYKNIEKLWRNFLWKG
Sbjct: 1178 DRIQKKLNNWKYAHISKGGRLTLIKSTLSSLSIYQLSVFQAPPSTYKNIEKLWRNFLWKG 1237

Query: 181  SFGLKGSHLINWSIVTKLKEEGGLGISRLQVINQALLSKWLWRYYSEPNSLWRRLIHIKY 240
            SFGLKGSHLINWSIVTKLKEEGGLGISRLQVINQALLSKWLWRYYSEPNSLWRRLIHIKY
Sbjct: 1238 SFGLKGSHLINWSIVTKLKEEGGLGISRLQVINQALLSKWLWRYYSEPNSLWRRLIHIKY 1297

Query: 241  KGKHPGDIPSNISSSSSKAPWKSIINNIDWFKSNQGWDLNNEDQISFWYSNWSPEGSATI 300
            KGKHPGDIPSNISSSSSKAPWKSIINNIDWFKSNQGWDLNNEDQISFWYSNWSPEG  + 
Sbjct: 1298 KGKHPGDIPSNISSSSSKAPWKSIINNIDWFKSNQGWDLNNEDQISFWYSNWSPEGCLST 1357

Query: 301  A 302
            A
Sbjct: 1358 A 1358

[Close]

BLAST of IVF0017328 vs. ExPASy TrEMBL
Match: A0A5D3C2W8 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G001680 PE=4 SV=1)

HSP 1 Score: 562.8 bits (1449), Expect = 9.1e-157
Identity = 269/296 (90.88%), Postives = 281/296 (94.93%), Query Frame = 0


Query: 1    MDYLSRLLSHLESSGAIKGVCLANDCNISHILFADDILLFVEDNDHFLNNLRMALSLFEK 60
            MDYLSRLLSHLES+GAIKGVCLANDCNISHILFADDILLFVEDND +LNNLRMA+SLFEK
Sbjct: 812  MDYLSRLLSHLESTGAIKGVCLANDCNISHILFADDILLFVEDNDLYLNNLRMAISLFEK 871

Query: 61   ASGLKINLSKSAMVPVNVSWSRALECASSWGISCHTLPLTYLGVPLGGNPKSNIFWRNIE 120
            ASGLKINL+KS MV VNVSW RALECASSW ISCHTLPLTYLGVPLGGNPKS +FWRNIE
Sbjct: 872  ASGLKINLTKSVMVTVNVSWPRALECASSWDISCHTLPLTYLGVPLGGNPKSKLFWRNIE 931

Query: 121  DRIQKKLNNWKYAHISKGGRLTLIKSTLSSLSIYQLSVFQAPPSTYKNIEKLWRNFLWKG 180
            DRIQKKL+NWKYAHISKGGRLTLIKSTLSSL IYQLSVFQA  STYKNIEKLWRNFLWKG
Sbjct: 932  DRIQKKLSNWKYAHISKGGRLTLIKSTLSSLPIYQLSVFQASSSTYKNIEKLWRNFLWKG 991

Query: 181  SFGLKGSHLINWSIVTKLKEEGGLGISRLQVINQALLSKWLWRYYSEPNSLWRRLIHIKY 240
            S G KGSHLINWSIVTK KEEGGLGISRLQ+ NQALLSKWLWRYYSEPNSLWRRLIHIKY
Sbjct: 992  SCGSKGSHLINWSIVTKPKEEGGLGISRLQITNQALLSKWLWRYYSEPNSLWRRLIHIKY 1051

Query: 241  KGKHPGDIPSNISSSSSKAPWKSIINNIDWFKSNQGWDLNNEDQISFWYSNWSPEG 297
            +GKHPGD+PSNISSSSSKAPW+SIINNI+WFK NQGWDLNN DQISFW+SNWSPEG
Sbjct: 1052 QGKHPGDLPSNISSSSSKAPWRSIINNIEWFKRNQGWDLNNGDQISFWFSNWSPEG 1107

[Close]

BLAST of IVF0017328 vs. ExPASy TrEMBL
Match: A0A5D3C9J6 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold323G00690 PE=4 SV=1)

HSP 1 Score: 561.6 bits (1446), Expect = 2.0e-156
Identity = 268/300 (89.33%), Postives = 281/300 (93.67%), Query Frame = 0


Query: 1   MDYLSRLLSHLESSGAIKGVCLANDCNISHILFADDILLFVEDNDHFLNNLRMALSLFEK 60
           MDYLSRLLSHLES+GAIKGVCLANDCNISHILFADDILLFVEDND +L NLRMA+SLFEK
Sbjct: 1   MDYLSRLLSHLESTGAIKGVCLANDCNISHILFADDILLFVEDNDLYLKNLRMAISLFEK 60

Query: 61  ASGLKINLSKSAMVPVNVSWSRALECASSWGISCHTLPLTYLGVPLGGNPKSNIFWRNIE 120
           ASGLKINLSKS MVPVNV W RALECASSW ISCHTLPLTYLGVPLGGNPKS +FWRNIE
Sbjct: 61  ASGLKINLSKSVMVPVNVPWPRALECASSWEISCHTLPLTYLGVPLGGNPKSKLFWRNIE 120

Query: 121 DRIQKKLNNWKYAHISKGGRLTLIKSTLSSLSIYQLSVFQAPPSTYKNIEKLWRNFLWKG 180
           DRIQKKL+NWKYAHISKGGRLTLIKSTLSSL IYQLSVFQAP STYKNIEKLWRNFLWKG
Sbjct: 121 DRIQKKLSNWKYAHISKGGRLTLIKSTLSSLPIYQLSVFQAPSSTYKNIEKLWRNFLWKG 180

Query: 181 SFGLKGSHLINWSIVTKLKEEGGLGISRLQVINQALLSKWLWRYYSEPNSLWRRLIHIKY 240
           S G KGSHLINW+IVTK KEEG LGIS+LQ+ NQALLSKWLWRYYSEPNSLWRRLIHIKY
Sbjct: 181 SCGSKGSHLINWAIVTKPKEEGELGISKLQITNQALLSKWLWRYYSEPNSLWRRLIHIKY 240

Query: 241 KGKHPGDIPSNISSSSSKAPWKSIINNIDWFKSNQGWDLNNEDQISFWYSNWSPEGSATI 300
           +GKHPGDIPSNISSSS KAPW+SIINNIDWFK NQGWDLNN DQISFW+SNWSPEG+  +
Sbjct: 241 QGKHPGDIPSNISSSSPKAPWRSIINNIDWFKRNQGWDLNNGDQISFWFSNWSPEGNLPV 300

[Close]

BLAST of IVF0017328 vs. ExPASy TrEMBL
Match: A0A5D3BLV7 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G005290 PE=4 SV=1)

HSP 1 Score: 511.1 bits (1315), Expect = 3.1e-141
Identity = 248/301 (82.39%), Postives = 268/301 (89.04%), Query Frame = 0


Query: 1    MDYLSRLLSHLESSGAIKGVCLANDCNISHILFADDILLFVEDNDHFLNNLRMALSLFEK 60
            MDYLSRLLSHLESSGAIKGV L  +CNISHILFADDILLF+EDND FL NLRMALSLFE+
Sbjct: 1319 MDYLSRLLSHLESSGAIKGVSLNGNCNISHILFADDILLFIEDNDCFLKNLRMALSLFER 1378

Query: 61   ASGLKINLSKSAMVPVNVSWSRALECASSWGISCHTLPLTYLGVPLGGNPKSNIFWRNIE 120
            ASGLKINL KSA+VPVNVS  RA ECAS WGISCH+LPL+YLGVPLGGNPKSN+FWRN+E
Sbjct: 1379 ASGLKINLLKSALVPVNVSLKRAKECASFWGISCHSLPLSYLGVPLGGNPKSNLFWRNVE 1438

Query: 121  DRIQKKLNNWKYAHISKGGRLTLIKSTLSSLSIYQLSVFQAPPSTYKNIEKLWRNFLWKG 180
            D+IQKKLNNWKYA ISKGGRLTLIKSTLSSL IYQLSVFQAP  T KNIEKLWR FLWKG
Sbjct: 1439 DKIQKKLNNWKYAQISKGGRLTLIKSTLSSLPIYQLSVFQAPSLTCKNIEKLWRKFLWKG 1498

Query: 181  SFGLKGSHLINWSIVTKLKEEGGLGISRLQVINQALLSKWLWRYYSEPNSLWRRLIHIKY 240
            + G +GSHLINW+ V+K KEEGGLGISRL V N+ALLSKWLWRY SEPN+LWRRLI  KY
Sbjct: 1499 NNGSEGSHLINWTKVSKSKEEGGLGISRLNVTNKALLSKWLWRYLSEPNALWRRLIQCKY 1558

Query: 241  KGKHPGDIPSNISSSSSKAPWKSIINNIDWFKSNQGWDLNNEDQISFWYSNWSPEGSATI 300
            KGK PGDIPSNISSS+SKAPW+SII++ DWFKSNQ WDLNN DQISFWYSNWS EG  + 
Sbjct: 1559 KGKFPGDIPSNISSSTSKAPWRSIIDSTDWFKSNQSWDLNNGDQISFWYSNWSQEGRLST 1618

Query: 301  A 302
            A
Sbjct: 1619 A 1619

[Close]

BLAST of IVF0017328 vs. ExPASy TrEMBL
Match: A0A5A7TQI1 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold500G001110 PE=4 SV=1)

HSP 1 Score: 505.8 bits (1301), Expect = 1.3e-139
Identity = 244/301 (81.06%), Postives = 269/301 (89.37%), Query Frame = 0


Query: 1   MDYLSRLLSHLESSGAIKGVCLANDCNISHILFADDILLFVEDNDHFLNNLRMALSLFEK 60
           MDYLSRLLSHLESSGAIKGV L ++CNISHILFADDILLF+EDND+FLNNLRMALSLFE+
Sbjct: 398 MDYLSRLLSHLESSGAIKGVSLNSNCNISHILFADDILLFIEDNDYFLNNLRMALSLFER 457

Query: 61  ASGLKINLSKSAMVPVNVSWSRALECASSWGISCHTLPLTYLGVPLGGNPKSNIFWRNIE 120
           ASGLKINL KSA+VPVNVS +RA ECAS WGISCH+LPL+YLGVPLGGNPKSN+FWRN+E
Sbjct: 458 ASGLKINLLKSALVPVNVSVNRAKECASFWGISCHSLPLSYLGVPLGGNPKSNLFWRNVE 517

Query: 121 DRIQKKLNNWKYAHISKGGRLTLIKSTLSSLSIYQLSVFQAPPSTYKNIEKLWRNFLWKG 180
           D+IQKKLNNWKYA ISK GRLTLIKSTLSSL IYQLSVFQAP  T KNIEK WR FLWKG
Sbjct: 518 DKIQKKLNNWKYAQISKSGRLTLIKSTLSSLPIYQLSVFQAPSLTCKNIEKSWRKFLWKG 577

Query: 181 SFGLKGSHLINWSIVTKLKEEGGLGISRLQVINQALLSKWLWRYYSEPNSLWRRLIHIKY 240
           + G +GSHLINW+ V+K KEEG LGISRL V N+ALL+KWLWRY SEPN+LWRRLI  KY
Sbjct: 578 NNGSEGSHLINWTKVSKSKEEGRLGISRLHVTNKALLTKWLWRYLSEPNALWRRLIQCKY 637

Query: 241 KGKHPGDIPSNISSSSSKAPWKSIINNIDWFKSNQGWDLNNEDQISFWYSNWSPEGSATI 300
           KG +PGDIPSNISSS+ KAPW+SII+NIDWFKSNQ W+LNN DQISFWYSNWS EG  + 
Sbjct: 638 KGNYPGDIPSNISSSTPKAPWRSIIDNIDWFKSNQSWELNNGDQISFWYSNWSLEGRLST 697

Query: 301 A 302
           A
Sbjct: 698 A 698

[Close]

BLAST of IVF0017328 vs. NCBI nr
Match: TYK05808.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])

HSP 1 Score: 617 bits (1592), Expect = 1.86e-207
Identity = 297/301 (98.67%), Postives = 298/301 (99.00%), Query Frame = 0


Query: 1    MDYLSRLLSHLESSGAIKGVCLANDCNISHILFADDILLFVEDNDHFLNNLRMALSLFEK 60
            MDYLSRLLSHLESSGAIKGVCLANDCNISHILFADDILLFVEDNDHFLNNLRMALSLFEK
Sbjct: 1058 MDYLSRLLSHLESSGAIKGVCLANDCNISHILFADDILLFVEDNDHFLNNLRMALSLFEK 1117

Query: 61   ASGLKINLSKSAMVPVNVSWSRALECASSWGISCHTLPLTYLGVPLGGNPKSNIFWRNIE 120
            ASGLKINLSKSAMVPVNVSWSRALECASSWGISCHTLPLTYLGVPLGGNPKSNIFWRNIE
Sbjct: 1118 ASGLKINLSKSAMVPVNVSWSRALECASSWGISCHTLPLTYLGVPLGGNPKSNIFWRNIE 1177

Query: 121  DRIQKKLNNWKYAHISKGGRLTLIKSTLSSLSIYQLSVFQAPPSTYKNIEKLWRNFLWKG 180
            DRIQKKLNNWKYAHISKGGRLTLIKSTLSSLSIYQLSVFQAPPSTYKNIEKLWRNFLWKG
Sbjct: 1178 DRIQKKLNNWKYAHISKGGRLTLIKSTLSSLSIYQLSVFQAPPSTYKNIEKLWRNFLWKG 1237

Query: 181  SFGLKGSHLINWSIVTKLKEEGGLGISRLQVINQALLSKWLWRYYSEPNSLWRRLIHIKY 240
            SFGLKGSHLINWSIVTKLKEEGGLGISRLQVINQALLSKWLWRYYSEPNSLWRRLIHIKY
Sbjct: 1238 SFGLKGSHLINWSIVTKLKEEGGLGISRLQVINQALLSKWLWRYYSEPNSLWRRLIHIKY 1297

Query: 241  KGKHPGDIPSNISSSSSKAPWKSIINNIDWFKSNQGWDLNNEDQISFWYSNWSPEGSATI 300
            KGKHPGDIPSNISSSSSKAPWKSIINNIDWFKSNQGWDLNNEDQISFWYSNWSPEG  + 
Sbjct: 1298 KGKHPGDIPSNISSSSSKAPWKSIINNIDWFKSNQGWDLNNEDQISFWYSNWSPEGCLST 1357

[Close]

BLAST of IVF0017328 vs. NCBI nr
Match: KAA0050814.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] >TYK08531.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])

HSP 1 Score: 563 bits (1450), Expect = 4.57e-198
Identity = 268/300 (89.33%), Postives = 281/300 (93.67%), Query Frame = 0


Query: 1   MDYLSRLLSHLESSGAIKGVCLANDCNISHILFADDILLFVEDNDHFLNNLRMALSLFEK 60
           MDYLSRLLSHLES+GAIKGVCLANDCNISHILFADDILLFVEDND +L NLRMA+SLFEK
Sbjct: 1   MDYLSRLLSHLESTGAIKGVCLANDCNISHILFADDILLFVEDNDLYLKNLRMAISLFEK 60

Query: 61  ASGLKINLSKSAMVPVNVSWSRALECASSWGISCHTLPLTYLGVPLGGNPKSNIFWRNIE 120
           ASGLKINLSKS MVPVNV W RALECASSW ISCHTLPLTYLGVPLGGNPKS +FWRNIE
Sbjct: 61  ASGLKINLSKSVMVPVNVPWPRALECASSWEISCHTLPLTYLGVPLGGNPKSKLFWRNIE 120

Query: 121 DRIQKKLNNWKYAHISKGGRLTLIKSTLSSLSIYQLSVFQAPPSTYKNIEKLWRNFLWKG 180
           DRIQKKL+NWKYAHISKGGRLTLIKSTLSSL IYQLSVFQAP STYKNIEKLWRNFLWKG
Sbjct: 121 DRIQKKLSNWKYAHISKGGRLTLIKSTLSSLPIYQLSVFQAPSSTYKNIEKLWRNFLWKG 180

Query: 181 SFGLKGSHLINWSIVTKLKEEGGLGISRLQVINQALLSKWLWRYYSEPNSLWRRLIHIKY 240
           S G KGSHLINW+IVTK KEEG LGIS+LQ+ NQALLSKWLWRYYSEPNSLWRRLIHIKY
Sbjct: 181 SCGSKGSHLINWAIVTKPKEEGELGISKLQITNQALLSKWLWRYYSEPNSLWRRLIHIKY 240

Query: 241 KGKHPGDIPSNISSSSSKAPWKSIINNIDWFKSNQGWDLNNEDQISFWYSNWSPEGSATI 300
           +GKHPGDIPSNISSSS KAPW+SIINNIDWFK NQGWDLNN DQISFW+SNWSPEG+  +
Sbjct: 241 QGKHPGDIPSNISSSSPKAPWRSIINNIDWFKRNQGWDLNNGDQISFWFSNWSPEGNLPV 300

[Close]

BLAST of IVF0017328 vs. NCBI nr
Match: TYK05690.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])

HSP 1 Score: 564 bits (1454), Expect = 5.54e-189
Identity = 269/296 (90.88%), Postives = 281/296 (94.93%), Query Frame = 0


Query: 1    MDYLSRLLSHLESSGAIKGVCLANDCNISHILFADDILLFVEDNDHFLNNLRMALSLFEK 60
            MDYLSRLLSHLES+GAIKGVCLANDCNISHILFADDILLFVEDND +LNNLRMA+SLFEK
Sbjct: 812  MDYLSRLLSHLESTGAIKGVCLANDCNISHILFADDILLFVEDNDLYLNNLRMAISLFEK 871

Query: 61   ASGLKINLSKSAMVPVNVSWSRALECASSWGISCHTLPLTYLGVPLGGNPKSNIFWRNIE 120
            ASGLKINL+KS MV VNVSW RALECASSW ISCHTLPLTYLGVPLGGNPKS +FWRNIE
Sbjct: 872  ASGLKINLTKSVMVTVNVSWPRALECASSWDISCHTLPLTYLGVPLGGNPKSKLFWRNIE 931

Query: 121  DRIQKKLNNWKYAHISKGGRLTLIKSTLSSLSIYQLSVFQAPPSTYKNIEKLWRNFLWKG 180
            DRIQKKL+NWKYAHISKGGRLTLIKSTLSSL IYQLSVFQA  STYKNIEKLWRNFLWKG
Sbjct: 932  DRIQKKLSNWKYAHISKGGRLTLIKSTLSSLPIYQLSVFQASSSTYKNIEKLWRNFLWKG 991

Query: 181  SFGLKGSHLINWSIVTKLKEEGGLGISRLQVINQALLSKWLWRYYSEPNSLWRRLIHIKY 240
            S G KGSHLINWSIVTK KEEGGLGISRLQ+ NQALLSKWLWRYYSEPNSLWRRLIHIKY
Sbjct: 992  SCGSKGSHLINWSIVTKPKEEGGLGISRLQITNQALLSKWLWRYYSEPNSLWRRLIHIKY 1051

Query: 241  KGKHPGDIPSNISSSSSKAPWKSIINNIDWFKSNQGWDLNNEDQISFWYSNWSPEG 296
            +GKHPGD+PSNISSSSSKAPW+SIINNI+WFK NQGWDLNN DQISFW+SNWSPEG
Sbjct: 1052 QGKHPGDLPSNISSSSSKAPWRSIINNIEWFKRNQGWDLNNGDQISFWFSNWSPEG 1107

[Close]

BLAST of IVF0017328 vs. NCBI nr
Match: TYK05718.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])

HSP 1 Score: 506 bits (1304), Expect = 9.89e-174
Identity = 246/301 (81.73%), Postives = 270/301 (89.70%), Query Frame = 0


Query: 1   MDYLSRLLSHLESSGAIKGVCLANDCNISHILFADDILLFVEDNDHFLNNLRMALSLFEK 60
           MDYLSRLLSHLESSGAIKGV L ++CNIS+ILFADDILLF+EDND FLNNLRMALSLFE+
Sbjct: 177 MDYLSRLLSHLESSGAIKGVSLNSNCNISYILFADDILLFIEDNDCFLNNLRMALSLFER 236

Query: 61  ASGLKINLSKSAMVPVNVSWSRALECASSWGISCHTLPLTYLGVPLGGNPKSNIFWRNIE 120
           ASGLKINL KSA+VP+NVS +RA ECAS WGIS H+LPL+YLGVPLGGNPKSN+FWRN+E
Sbjct: 237 ASGLKINLLKSALVPMNVSLNRAKECASFWGISFHSLPLSYLGVPLGGNPKSNLFWRNVE 296

Query: 121 DRIQKKLNNWKYAHISKGGRLTLIKSTLSSLSIYQLSVFQAPPSTYKNIEKLWRNFLWKG 180
           D+IQKKLNNWKYA ISKGGRLTLIKSTLSSL IYQLSVFQAP  T KNIEK WR FLWKG
Sbjct: 297 DKIQKKLNNWKYAQISKGGRLTLIKSTLSSLPIYQLSVFQAPSLTCKNIEKSWRKFLWKG 356

Query: 181 SFGLKGSHLINWSIVTKLKEEGGLGISRLQVINQALLSKWLWRYYSEPNSLWRRLIHIKY 240
           + G +GSHLINW+ V+K KEEGGLGISRLQV N+ALLSKWLWRY SEPN+LWRRLI  KY
Sbjct: 357 NNGSEGSHLINWTKVSKSKEEGGLGISRLQVTNKALLSKWLWRYLSEPNALWRRLIQCKY 416

Query: 241 KGKHPGDIPSNISSSSSKAPWKSIINNIDWFKSNQGWDLNNEDQISFWYSNWSPEGSATI 300
           KGK+PGDI SN SSS+SKAPW+SII+NIDWFKSNQ WDLNN DQISFWYSNWS EG  + 
Sbjct: 417 KGKYPGDITSNNSSSTSKAPWRSIIDNIDWFKSNQSWDLNNGDQISFWYSNWSQEGRLST 476

[Close]

BLAST of IVF0017328 vs. NCBI nr
Match: KAA0045138.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] >TYK23599.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])

HSP 1 Score: 507 bits (1305), Expect = 2.22e-171
Identity = 244/301 (81.06%), Postives = 269/301 (89.37%), Query Frame = 0


Query: 1   MDYLSRLLSHLESSGAIKGVCLANDCNISHILFADDILLFVEDNDHFLNNLRMALSLFEK 60
           MDYLSRLLSHLESSGAIKGV L ++CNISHILFADDILLF+EDND+FLNNLRMALSLFE+
Sbjct: 398 MDYLSRLLSHLESSGAIKGVSLNSNCNISHILFADDILLFIEDNDYFLNNLRMALSLFER 457

Query: 61  ASGLKINLSKSAMVPVNVSWSRALECASSWGISCHTLPLTYLGVPLGGNPKSNIFWRNIE 120
           ASGLKINL KSA+VPVNVS +RA ECAS WGISCH+LPL+YLGVPLGGNPKSN+FWRN+E
Sbjct: 458 ASGLKINLLKSALVPVNVSVNRAKECASFWGISCHSLPLSYLGVPLGGNPKSNLFWRNVE 517

Query: 121 DRIQKKLNNWKYAHISKGGRLTLIKSTLSSLSIYQLSVFQAPPSTYKNIEKLWRNFLWKG 180
           D+IQKKLNNWKYA ISK GRLTLIKSTLSSL IYQLSVFQAP  T KNIEK WR FLWKG
Sbjct: 518 DKIQKKLNNWKYAQISKSGRLTLIKSTLSSLPIYQLSVFQAPSLTCKNIEKSWRKFLWKG 577

Query: 181 SFGLKGSHLINWSIVTKLKEEGGLGISRLQVINQALLSKWLWRYYSEPNSLWRRLIHIKY 240
           + G +GSHLINW+ V+K KEEG LGISRL V N+ALL+KWLWRY SEPN+LWRRLI  KY
Sbjct: 578 NNGSEGSHLINWTKVSKSKEEGRLGISRLHVTNKALLTKWLWRYLSEPNALWRRLIQCKY 637

Query: 241 KGKHPGDIPSNISSSSSKAPWKSIINNIDWFKSNQGWDLNNEDQISFWYSNWSPEGSATI 300
           KG +PGDIPSNISSS+ KAPW+SII+NIDWFKSNQ W+LNN DQISFWYSNWS EG  + 
Sbjct: 638 KGNYPGDIPSNISSSTPKAPWRSIIDNIDWFKSNQSWELNNGDQISFWYSNWSLEGRLST 697

[Close]

BLAST of IVF0017328 vs. TAIR 10
Match: AT3G24255.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 84.3 bits (207), Expect = 1.8e-16
Identity = 58/208 (27.88%), Postives = 90/208 (43.27%), Query Frame = 0


Query: 89  SWGISCHTLPLTYLGVPLGGNPKSNIFWRNIEDRIQKKLNNWKYAHISKGGRLTLIKSTL 148
           S+  +   LP+ YLG+PL     +   +  + ++I+ ++  W   H+S  GRL LI S +
Sbjct: 15  SFPFASGALPVRYLGLPLLTKKMTTSDYGPLVEKIRVRIGKWTARHLSFAGRLQLISSVI 74

Query: 149 SSLSIYQLSVFQAPPSTYKNIEKLWRNFLWKGSFGLKGSHLINWSIVTKLKEEGGLGISR 208
            SL+ + +S F+ P +  K I+ +  +FLW G         + WS V   K+EGGLGI  
Sbjct: 75  HSLTNFWMSAFRLPSACIKEIDSICSSFLWSGPELNTKKAKVAWSDVCTPKDEGGLGIRS 134

Query: 209 LQVINQALLSKWLWRYYSEPNSLWRRLIHIKYKGKHPGDIPSNISSSSSKAPWKSIINNI 268
           L+  N+               S W               I  N +  S    WK I+ + 
Sbjct: 135 LKEANK--------------GSFW--------------SISGNTTLGSWM--WKKILKHR 192

Query: 269 DWFKSNQGWDLNNEDQISFWYSNWSPEG 297
                    D++N    SFW+ NWS  G
Sbjct: 195 ALASGFVKHDIHNGSNTSFWFDNWSKIG 192

[Close]

BLAST of IVF0017328 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 70.1 bits (170), Expect = 3.6e-12
Identity = 43/155 (27.74%), Postives = 67/155 (43.23%), Query Frame = 0


Query: 150 SLSIYQLSVFQAPPSTYKNIEKLWRNFLWKGSFGLKGSHLINWSIVTKLKEEGGLGISRL 209
           +L  Y ++ F  P +  K I  +  +F W+     KG H   W  ++  K EGG+G   +
Sbjct: 2   ALPTYTMACFLLPKTVCKQIISVLADFWWRNKQEAKGMHWKAWDHLSCYKAEGGIGFKDI 61

Query: 210 QVINQALLSKWLWRYYSEPNSLWRRLIHIKYKGKHPGDIPSNISSSSSKAPWKSIINNID 269
           +  N ALL K +WR  S P SL  ++   +Y   H  D  +    S     WKSI  + +
Sbjct: 62  EAFNLALLGKQMWRMLSRPESLMAKVFKSRY--FHKSDPLNAPLGSRPSFVWKSIHASQE 121

Query: 270 WFKSNQGWDLNNEDQISFWYSNWSPEGSATIALNL 305
             +      + N + I  W   W     A+ AL +
Sbjct: 122 ILRQGARAVVGNGEDIIIWRHKWLDSKPASAALRM 154

[Close]

BLAST of IVF0017328 vs. TAIR 10
Match: ATMG00310.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 52.4 bits (124), Expect = 7.7e-07
Identity = 39/155 (25.16%), Postives = 66/155 (42.58%), Query Frame = 0


Query: 150 SLSIYQLSVFQAPPSTYKNIEKLWRNFLWKGSFGLKGSHLINWSIVTKLKE-EGGLGISR 209
           +L +Y +S F+      K +      F W      +    + W  + K KE +GGLG   
Sbjct: 2   ALPVYAMSCFRLSKLLCKKLTSAMTEFWWSSCENKRKISWVAWQKLCKSKEDDGGLGFRD 61

Query: 210 LQVINQALLSKWLWRYYSEPNSLWRRLIHIKYKGKHPGDIPSNISSSSSKAPWKSIINNI 269
           L   NQALL+K  +R   +P++L  RL+  +Y   H   +  ++ +  S A W+SII+  
Sbjct: 62  LGWFNQALLAKQSFRIIHQPHTLLSRLLRSRY-FPHSSMMECSVGTRPSYA-WRSIIHGR 121

Query: 270 DWFKSNQGWDLNNEDQISFWYSNWSPEGSATIALN 304
           +         + +      W   W  + +    LN
Sbjct: 122 ELLSRGLLRTIGDGIHTKVWLDRWIMDETPLPPLN 154

The following BLAST results are available for this feature:

BLAST of IVF0017328 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0C2F6	3.0e-24	35.96	Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1...	[more]
O00370	5.0e-11	25.00	LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1	[more]
P08548	2.5e-10	23.89	LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1	[more]
P93295	1.1e-05	25.16	Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of IVF0017328 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C3M3	6.9e-173	98.67	LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119...	[more]
A0A5D3C2W8	9.1e-157	90.88	LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119...	[more]
A0A5D3C9J6	2.0e-156	89.33	LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119...	[more]
A0A5D3BLV7	3.1e-141	82.39	LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119...	[more]
A0A5A7TQI1	1.3e-139	81.06	LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119...	[more]

BLAST of IVF0017328 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK05808.1	1.86e-207	98.67	LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]	[more]
KAA0050814.1	4.57e-198	89.33	LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] >TYK085...	[more]
TYK05690.1	5.54e-189	90.88	LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]	[more]
TYK05718.1	9.89e-174	81.73	LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]	[more]
KAA0045138.1	2.22e-171	81.06	LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] >TYK235...	[more]

BLAST of IVF0017328 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G24255.1	1.8e-16	27.88	RNA-directed DNA polymerase (reverse transcriptase)-related family protein	[more]
AT4G29090.1	3.6e-12	27.74	Ribonuclease H-like superfamily protein	[more]
ATMG00310.1	7.7e-07	25.16	RNA-directed DNA polymerase (reverse transcriptase)-related family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 26..106 e-value: 5.2E-8 score: 32.7
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 1..106 score: 9.162603
None	No IPR available	PANTHER	PTHR33116	REVERSE TRANSCRIPTASE ZINC-BINDING DOMAIN-CONTAINING PROTEIN-RELATED-RELATED	coord: 2..292

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0017328.1	IVF0017328.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007165	signal transduction
molecular_function	GO:0003953	NAD+ nucleosidase activity