IVF0017262 (gene) Melon (IVF77) v1

Overview


Name	IVF0017262
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	YqgFc domain-containing protein
Location	tig00195367: 589146 .. 593144 (+)
RNA-Seq Expression	IVF0017262
Synteny	IVF0017262

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCCCCCAATTCTCCCAACCATGTTTACGTTGTTGTGTGGACAATGTTTCCAATTCCAAGCCTTTCAGTTTCCGTTGCAAAGCCACAGATTACTTCACTCCCTCCATCCTCATCTCCCTCCTCCATCTCCACCAGCCCTATTTTCCAAATCCCACAACAACAACCCATTTTCTTCCATTGAACTTCCTCCCAACGCCCTCCGCCGCAAGCTCGATCCTCACTGGAGAGGAGGTTTCAGTCTAGGTGTCGACCTCGGAACCTCTCGCACTGGACTTGCTCTTAGTAAAGGCTTCTCCATTCGTCCTCTTACCGTAATTTTTTTTTCATTCTTCCCTTTATGCATTTCTCTCTACCTACTATTCTCACCACATTCATCATTCTACCTCTCCACTCTTTTCTGCATATTTTCATTTTCTCCTCAATTTTCCCTTTTTTTTTTTTTTTTTTTTTTAACTCAATCTTGATCCATGTTCTTATTCAATTTCATTTCTTTAACTGTTTATAATGTGGCCAACGGCGGACTGCTGTTTATTATATTGAAACTATCCTACGTTTGGGATTCATGATTTCTTTTGCTGCCTTAGGTTCTAGAGTTGCGAGGACAAAAGCTTGAGGCTAAGCTCATTCAGATTGCTGAACAGGAAGTATATATCTCTCTCCCTCTTCGACCATCTTCCTACTGAAAATGCTATCAACATGTTGGAAATTTATTTCTTCTTTTTACTTGCACATTAATTGATGGGAAATAAACTGTAGGAGGCTGATGAATTTATTATTGGACTTCCTAAATCATGCGATGGGAAAGAGACACCTCAGTCAAACAAAATTCGTAGTATTGCCGGAAGGGTGGCAGCCCGAGCAGCTGAAAGGTGAAATACACCGAATGCTTGTACTGCCTCTCCTATGTCTTTTGTTCTGTACTAATACTGCTTTTAGTTTAGGGGCTGGAGAGTTTATTTGTATGATGAACATGGGACAACAGCAGAAGCGGAAAGCCATATGATTTCCAAGTAATGTTGTCCTCAACACTCACTTATGTTGTCTTTGTTTAATATTGTTTCCTTGGATCCTATCCTATAAATTTTGGTTCATCTCCTTTATCAGTATTGTTAATATGGATTCTGTTGCCTGTAAACTATATTGCACTTAGGAGCTGTTTGGAGAGCTAGAATGTAGTGATTTACTGGGTATCAGAGGAGTATTAGGTATCATGAATTTATCAAGGTGATGCAGACAATTGGTTGTTAATTGCTATGGTAGGAATGGAGGAGATGGACACTGAGATAAAAAGGTACAAAAAATTGTCCAAAATGGAAAAGAAAACGAAACATTTAAGAAGTGCAGTTATCACCGGTAAATAAGAAATATATGGCTTGAGGATTTAATGGTCAACGAGGTGGCGGTGACCACATTCTGGTTTAATTGCCCAAAATAATCAGTTGGTTTCCAATTATATTTCCCTTCATTCCAAATAGGCAGACTAGTGCTCAAACCAACCCCAAGAGCATTGGGATGGAATCATCTACTGTTTGTGGTAGAAACTTGTTGACGAAAGCTCTTTTCTGTGGCTTGAATGTCGCTCAATGTTTGCAAAGCATTCCTTTGACATTTATGGCTGATAAAGAACAACAAATTTTTTGAAGAGAAATATGAGTGAACAGATTTGTTGGATTTAGTACATCTCCATATTTTCTTTTTTTAATTACTCTGAGTTTCCATCTATAGCTAGTTGGGAATCACTCTCCTTGGCTTGGGCTGGAGGACTCGTCACCTTTGGTGCAGTCTTCTAATCAATTGGAGTTCACCATTTCCTACTAAAAAAAGAAAAGGAGAATTTGACAAAGGCAAACAAAATCTGTAAGACTTGAGATAAAATGAATACCTTTGATGGAAACCTGGATTTTTTTTATTGCAATTGTGAAAATAGGGGTTGAAACATCTTATAGTTTCTAAATTTTTCTTCTTTTCTAGGAGAATTGGTGGCATAACGACCCTATTAGTGGTCATTGTCATAATCTTCTACCGAAGCTCAAAGGTTTTAAGTTGGCTTTTAAAGCATGGAACTCAACCTTTGGCTGTCTCTCTAATATTAAAACTAATCTCCGGAAGACCCTTGCTACGCTCAATTTTCTGGAAGATCAATGGTCTCTCGATTCCCCATCCTTTCAAAAGCACACTGAAATTAGCGCAGAGCTTTTTAAGTCCAAGTAGTTGGCTGAGTGATGAAGCTCAACTTATTTCAATCAAATCATGCCTAGTAAGAAATAGTAGGAAAAACACCATCTGGATCCTTGGTAAATATAGGTTCAACAATTTAAATGACAAAGAAATAGAAGAGGGCTTTGTTGATTTCTATAAACAGCTACCAAGAAAGCCGGTTTGAGATTCACCCCACACACAAAATGGTTGGGGATTACAAACCAAACGCTCTTATTAGATATTTATACAAGATTTTAGCAATAGTTTTCACTTAGAAGTTGAAGAAAGCTATTCCTTATACCATAACTAAATTCCAAACAGCCTTTGTGGCAAATAAGATAAATCATAGATACTTCACTTATTGCAAATTAGCTTATTGATGAATGAGGGAGCAAAGAAAAAGTAAGATTGAATGACGTGAATGATGGAGAACCTAGTCAATGACTAGAAATTTTGATACTCATGCAAATTTCTATATGAAACTGATGGAGAATGGACTCGTTTCTTGTGAGGGTTGTTGCATGGGTAGCAACACATTTTTGTGGCCTGTAATAATTGATGTTATCAGGTTTCGTTTTGCTTTTTTCACTTAATGGAAGAGAAGTGTAGAATGGGACAGCTTATATTTCAAATTGGCCTGGCGGCTGTTTTATTTTCTTTATGCAAATTAGGTGCATTGTTCACATGAGAAAAAAAAATTGTTGTCCCACTAGTATTGGAAAGACTTCTTATTTTCTTTTACATATTTCTACTGTGGTTCTCTCTCAGTGTAAATTTTATGGCTCCCAGACCCTATCCATTCAACCGCTATGGTTAGATTGTTTGTTGCATCGACAGGAAGAACTCTGTAATTTTTCAGGCTTGTAGTCGGCTTTCCTACCCCTCTTTCCTCCACTTCTTTTGTAGTTTGAATGATCTATGAAATTGGTCGGTTTCTTATTGAAAAATAAAATAGTAATATCTTGTATCAGCAGATCTATACTTCTCTATTTGGATTGGTCACATATATCACGTATCATAATGGGGAATTAATTTTATTTTTTAATGTTTTCTTTAGGGGTCTCAATAAATCTACTAGGCAGAAGAAGATTGATGCCTATGCTGCCATGGTAAAGTGGGGGAATATTGTCATGTTTTTTAATATTGTGATGATAATAAATGCAGCAGTCCAGTCGTGTGTTCTTTTAAAAATAATTGTCTCTGACATTTTACTTTCTTTATTTGACGCAGATGGTACTAGAGAGATATTTTCTCATGTCAGGCCAGGGAACCGAACTTTTAGTGCCCAAGAGTCTAGTCTTACAAGATAAACTTATCGAGGGACCACCTACAGACCCAGACTTTAAGGATTGAGGATGTGCTTCAGGCCAGGAAAAAATAATCTGGGAGAGGCCCTTGGGGTATTTTTCTCTTTGACGGATAACAAAATTGCTATCAAACAAAGGGTATTTATTACTGTTGAAGTGGAAGAGAGCCGCAACCGACTTAGAAATGGAGGGTTACTTCCTCAAAGCATGGTCACGGAATTAGGTGAAAAGAGATACCGCTGTTCCTAATGAAGGCTCAATTGAAGGTTGCGGGTTGTGAGATGATGACGACGACGACGCTTTTGACATTATATCTTTATAACAATCTTGTCAGAATCTGTCCTCACATATTGAATTCACCTACACACTTCGGTTAGTTAAGGATGGGATTTGCTTTGGTCCGTCCTATGCACTTGTGCTTCTCCTTGATCGCCGAATCTCGTATGTACTTGGTTGAAATTATTTCTAAACGACGAAATTGATTAGATGCTGC

mRNA sequence

TTCCCCCAATTCTCCCAACCATGTTTACGTTGTTGTGTGGACAATGTTTCCAATTCCAAGCCTTTCAGTTTCCGTTGCAAAGCCACAGATTACTTCACTCCCTCCATCCTCATCTCCCTCCTCCATCTCCACCAGCCCTATTTTCCAAATCCCACAACAACAACCCATTTTCTTCCATTGAACTTCCTCCCAACGCCCTCCGCCGCAAGCTCGATCCTCACTGGAGAGGAGGTTTCAGTCTAGGTGTCGACCTCGGAACCTCTCGCACTGGACTTGCTCTTAGTAAAGGCTTCTCCATTCGTCCTCTTACCGTTCTAGAGTTGCGAGGACAAAAGCTTGAGGCTAAGCTCATTCAGATTGCTGAACAGGAAGAGGCTGATGAATTTATTATTGGACTTCCTAAATCATGCGATGGGAAAGAGACACCTCAGTCAAACAAAATTCGTAGTATTGCCGGAAGGGTGGCAGCCCGAGCAGCTGAAAGGGGCTGGAGAGTTTATTTGTATGATGAACATGGGACAACAGCAGAAGCGGAAAGCCATATGATTTCCAAGGGTCTCAATAAATCTACTAGGCAGAAGAAGATTGATGCCTATGCTGCCATGATGGTACTAGAGAGATATTTTCTCATGTCAGGCCAGGGAACCGAACTTTTAGTGCCCAAGAGTCTAGTCTTACAAGATAAACTTATCGAGGGACCACCTACAGACCCAGACTTTAAGGATTGAGGATGTGCTTCAGGCCAGGAAAAAATAATCTGGGAGAGGCCCTTGGGGTATTTTTCTCTTTGACGGATAACAAAATTGCTATCAAACAAAGGGTATTTATTACTGTTGAAGTGGAAGAGAGCCGCAACCGACTTAGAAATGGAGGGTTACTTCCTCAAAGCATGGTCACGGAATTAGGTGAAAAGAGATACCGCTGTTCCTAATGAAGGCTCAATTGAAGGTTGCGGGTTGTGAGATGATGACGACGACGACGCTTTTGACATTATATCTTTATAACAATCTTGTCAGAATCTGTCCTCACATATTGAATTCACCTACACACTTCGGTTAGTTAAGGATGGGATTTGCTTTGGTCCGTCCTATGCACTTGTGCTTCTCCTTGATCGCCGAATCTCGTATGTACTTGGTTGAAATTATTTCTAAACGACGAAATTGATTAGATGCTGC

Coding sequence (CDS)

ATGTTTACGTTGTTGTGTGGACAATGTTTCCAATTCCAAGCCTTTCAGTTTCCGTTGCAAAGCCACAGATTACTTCACTCCCTCCATCCTCATCTCCCTCCTCCATCTCCACCAGCCCTATTTTCCAAATCCCACAACAACAACCCATTTTCTTCCATTGAACTTCCTCCCAACGCCCTCCGCCGCAAGCTCGATCCTCACTGGAGAGGAGGTTTCAGTCTAGGTGTCGACCTCGGAACCTCTCGCACTGGACTTGCTCTTAGTAAAGGCTTCTCCATTCGTCCTCTTACCGTTCTAGAGTTGCGAGGACAAAAGCTTGAGGCTAAGCTCATTCAGATTGCTGAACAGGAAGAGGCTGATGAATTTATTATTGGACTTCCTAAATCATGCGATGGGAAAGAGACACCTCAGTCAAACAAAATTCGTAGTATTGCCGGAAGGGTGGCAGCCCGAGCAGCTGAAAGGGGCTGGAGAGTTTATTTGTATGATGAACATGGGACAACAGCAGAAGCGGAAAGCCATATGATTTCCAAGGGTCTCAATAAATCTACTAGGCAGAAGAAGATTGATGCCTATGCTGCCATGATGGTACTAGAGAGATATTTTCTCATGTCAGGCCAGGGAACCGAACTTTTAGTGCCCAAGAGTCTAGTCTTACAAGATAAACTTATCGAGGGACCACCTACAGACCCAGACTTTAAGGATTGA

Protein sequence

MFTLLCGQCFQFQAFQFPLQSHRLLHSLHPHLPPPSPPALFSKSHNNNPFSSIELPPNALRRKLDPHWRGGFSLGVDLGTSRTGLALSKGFSIRPLTVLELRGQKLEAKLIQIAEQEEADEFIIGLPKSCDGKETPQSNKIRSIAGRVAARAAERGWRVYLYDEHGTTAEAESHMISKGLNKSTRQKKIDAYAAMMVLERYFLMSGQGTELLVPKSLVLQDKLIEGPPTDPDFKD

Homology

[Close]

BLAST of IVF0017262 vs. ExPASy Swiss-Prot
Match: A1SJC8 (Putative pre-16S rRNA nuclease OS=Nocardioides sp. (strain ATCC BAA-499 / JS614) OX=196162 GN=Noca_2408 PE=3 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 1.0e-11
Identity = 50/137 (36.50%), Postives = 74/137 (54.01%), Query Frame = 0


Query: 69  RGGFSLGVDLGTSRTGLALS--KGFSIRPL-TVLELRGQKLEAKLIQIAEQEEAD---EF 128
           R G  +G+D G +R G+A S   GF   P+ TV   +G       I  AE++E     E 
Sbjct: 2   RAGVRIGIDPGDARIGVARSDPSGFLATPVETVRRGKGDLARIGRILAAEEDEGATVLEV 61

Query: 129 IIGLPKSCDGKETPQSNKIRSIAGRVAARAAERGWRVYLYDEHGTTAEAESHMISKGLNK 188
           ++GLP+S  G+E P + K+R  AGR+AAR A     V L DE  TT  AE+ +  +G   
Sbjct: 62  VVGLPRSLSGREGPAAAKVREFAGRLAARVAP--VPVRLVDERMTTVSAEAMLRDQGRTG 121

Query: 189 STRQKKIDAYAAMMVLE 200
             R+  +D  AA+++L+
Sbjct: 122 GKRRAVVDQAAAVLILQ 136

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BLAST of IVF0017262 vs. ExPASy Swiss-Prot
Match: A5D3C3 (Putative pre-16S rRNA nuclease OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) OX=370438 GN=PTH_1065 PE=3 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 5.5e-10
Identity = 44/139 (31.65%), Postives = 81/139 (58.27%), Query Frame = 0


Query: 74  LGVDLGTSRTGLALS--KGFSIRPLTVLELRGQKLEAKLIQIAE---QEEADEFIIGLPK 133
           +G+DLG  + G+ALS   G++ + L V+ ++G   EA + +I+E   Q    + ++GLP+
Sbjct: 4   MGLDLGDKKIGVALSDPMGWTAQGLDVIAVKGPP-EASVERISELVRQYGVGKIVVGLPR 63

Query: 134 SCDGKETPQSNKIRSIAGRVAARAAERGWRVYLYDEHGTTAEAESHMISKGLNKSTRQKK 193
           + +G   P++ + R+ AG +A         V L+DE  TT EAE  +I   L+++ R++ 
Sbjct: 64  NMNGSFGPRAERARAFAGCLAGAL---NLPVELWDERMTTLEAEKLLIEADLSRARRRQV 123

Query: 194 IDAYAAMMVLERYFLMSGQ 208
           ID  AA+++L+ +    G+
Sbjct: 124 IDKMAAVLILQSFLDSQGR 138

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BLAST of IVF0017262 vs. ExPASy Swiss-Prot
Match: Q3SR28 (Putative pre-16S rRNA nuclease OS=Nitrobacter winogradskyi (strain ATCC 25391 / DSM 10237 / CIP 104748 / NCIMB 11846 / Nb-255) OX=323098 GN=Nwi_2004 PE=3 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 7.2e-10
Identity = 46/137 (33.58%), Postives = 75/137 (54.74%), Query Frame = 0


Query: 67  HWRG-GFSLGVDLGTSRTGLALSKGFSIRPLTVLELRGQKL---EAKLIQIAEQEEADEF 126
           HW   G  +G+DLGT   G+A+S         V  +R +      A+L+ IA +  A+ F
Sbjct: 14  HWPARGALVGLDLGTKTIGVAVSDPDRRLATGVETIRRKTFTADAARLLAIAGERRAEGF 73

Query: 127 IIGLPKSCDGKETPQSNKIRSIAGRVAARAAERGWRVYLYDEHGTTAEAESHMISKGLNK 186
           I+GLP + DG E P++   R+ A R  AR  +  + + L+DE  +TA  E  +I   +++
Sbjct: 74  ILGLPINMDGSEGPRAQSTRAFA-RNLARLTD--FAIGLWDERLSTAAVERELIGLDMSR 133

Query: 187 STRQKKIDAYAAMMVLE 200
           + R K ID +AA+ +L+
Sbjct: 134 ARRAKVIDEHAAIFILQ 147

[Close]

BLAST of IVF0017262 vs. ExPASy Swiss-Prot
Match: B8DIJ5 (Putative pre-16S rRNA nuclease OS=Desulfovibrio vulgaris (strain DSM 19637 / Miyazaki F) OX=883 GN=DvMF_2352 PE=3 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.2e-09
Identity = 39/131 (29.77%), Postives = 70/131 (53.44%), Query Frame = 0


Query: 74  LGVDLGTSRTGLALSK---GFSIRPLTVLELRGQKLEAKLIQIAEQEEADEFIIGLPKSC 133
           LG+D GT RTG+A S      +    T++     +  A+L+ +AE+E A+ +++GLP   
Sbjct: 4   LGIDYGTKRTGVAASDTGGSMAFPRRTIVMTTRDRFFAELLAVAEEERAEAYVVGLPLLH 63

Query: 134 DGKETPQSNKIRSIAGRVAARAAERGWRVYLYDEHGTTAEAESHMISKGLNKSTRQKKID 193
           DG +T  + ++R+   R+  R       VYL +E  ++ EAE  +   GL+    +  +D
Sbjct: 64  DGTDTLTTRQVRNFVERLKRRTT---LPVYLMEEFLSSYEAEDDLRDAGLSGRALEAVVD 123

Query: 194 AYAAMMVLERY 202
             AA+ +L+ +
Sbjct: 124 QQAAVRILQSF 131

[Close]

BLAST of IVF0017262 vs. ExPASy Swiss-Prot
Match: C6C125 (Putative pre-16S rRNA nuclease OS=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIMB 8403 / VKM B-1763) OX=526222 GN=Desal_1125 PE=3 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.6e-09
Identity = 42/131 (32.06%), Postives = 71/131 (54.20%), Query Frame = 0


Query: 74  LGVDLGTSRTGLALSKGFSI--RPLTVLE-LRGQKLEAKLIQIAEQEEADEFIIGLPKSC 133
           L +D GT R GLA+S    I   P  V+E      + ++L++I E E+  + +IGLP S 
Sbjct: 4   LSIDFGTKRVGLAISDPDQIFAFPYKVMERTTRDAMFSELLEIIENEKVGDIVIGLPLSL 63

Query: 134 DGKETPQSNKIRSIAGRVAARAAERGWRVYLYDEHGTTAEAESHMISKGLNKSTRQKKID 193
           DG++T  + ++R+ A  +  R       ++L DE  ++  AE  +   GL    R+K +D
Sbjct: 64  DGEDTLTTRQVRNFAASLERRV---DLPIHLVDERLSSIAAEDELKEAGLWDRKRKKNLD 123

Query: 194 AYAAMMVLERY 202
           + AA ++LE +
Sbjct: 124 SQAAKIILETW 131

[Close]

BLAST of IVF0017262 vs. ExPASy TrEMBL
Match: A0A1S3AUT7 (uncharacterized protein LOC103483114 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483114 PE=3 SV=1)

HSP 1 Score: 471.5 bits (1212), Expect = 2.1e-129
Identity = 235/235 (100.00%), Postives = 235/235 (100.00%), Query Frame = 0


Query: 1   MFTLLCGQCFQFQAFQFPLQSHRLLHSLHPHLPPPSPPALFSKSHNNNPFSSIELPPNAL 60
           MFTLLCGQCFQFQAFQFPLQSHRLLHSLHPHLPPPSPPALFSKSHNNNPFSSIELPPNAL
Sbjct: 38  MFTLLCGQCFQFQAFQFPLQSHRLLHSLHPHLPPPSPPALFSKSHNNNPFSSIELPPNAL 97

Query: 61  RRKLDPHWRGGFSLGVDLGTSRTGLALSKGFSIRPLTVLELRGQKLEAKLIQIAEQEEAD 120
           RRKLDPHWRGGFSLGVDLGTSRTGLALSKGFSIRPLTVLELRGQKLEAKLIQIAEQEEAD
Sbjct: 98  RRKLDPHWRGGFSLGVDLGTSRTGLALSKGFSIRPLTVLELRGQKLEAKLIQIAEQEEAD 157

Query: 121 EFIIGLPKSCDGKETPQSNKIRSIAGRVAARAAERGWRVYLYDEHGTTAEAESHMISKGL 180
           EFIIGLPKSCDGKETPQSNKIRSIAGRVAARAAERGWRVYLYDEHGTTAEAESHMISKGL
Sbjct: 158 EFIIGLPKSCDGKETPQSNKIRSIAGRVAARAAERGWRVYLYDEHGTTAEAESHMISKGL 217

Query: 181 NKSTRQKKIDAYAAMMVLERYFLMSGQGTELLVPKSLVLQDKLIEGPPTDPDFKD 236
           NKSTRQKKIDAYAAMMVLERYFLMSGQGTELLVPKSLVLQDKLIEGPPTDPDFKD
Sbjct: 218 NKSTRQKKIDAYAAMMVLERYFLMSGQGTELLVPKSLVLQDKLIEGPPTDPDFKD 272

[Close]

BLAST of IVF0017262 vs. ExPASy TrEMBL
Match: A0A0A0L3L5 (YqgFc domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G116900 PE=3 SV=1)

HSP 1 Score: 443.0 bits (1138), Expect = 8.0e-121
Identity = 221/235 (94.04%), Postives = 226/235 (96.17%), Query Frame = 0


Query: 1   MFTLLCGQCFQFQAFQFPLQSHRLLHSLHPHLPPPSPPALFSKSHNNNPFSSIELPPNAL 60
           MFT   GQCFQFQAFQFPLQ+H+LLHSLHPHLPPPS PAL SKSHNNNP SSIELPPNAL
Sbjct: 1   MFTWSSGQCFQFQAFQFPLQTHKLLHSLHPHLPPPSSPALISKSHNNNPISSIELPPNAL 60

Query: 61  RRKLDPHWRGGFSLGVDLGTSRTGLALSKGFSIRPLTVLELRGQKLEAKLIQIAEQEEAD 120
           RRKLDPHWRGGFSLGVDLGTSRTGLALSKGFS RPLTVLELRGQKLEAKLI+IAEQEEAD
Sbjct: 61  RRKLDPHWRGGFSLGVDLGTSRTGLALSKGFSTRPLTVLELRGQKLEAKLIEIAEQEEAD 120

Query: 121 EFIIGLPKSCDGKETPQSNKIRSIAGRVAARAAERGWRVYLYDEHGTTAEAESHMISKGL 180
           EFIIGLPKSCDGKETPQSNKIRSIAGRVAARAAERGWRVYLYDEHGTTAEAESHMIS+GL
Sbjct: 121 EFIIGLPKSCDGKETPQSNKIRSIAGRVAARAAERGWRVYLYDEHGTTAEAESHMISRGL 180

Query: 181 NKSTRQKKIDAYAAMMVLERYFLMSGQGTELLVPKSLVLQDKLIEGPPTDPDFKD 236
           NKSTRQKKIDAYAAMMVLERYF  SGQGTELLVPKSLVLQDKLIEGPPTDPDF+D
Sbjct: 181 NKSTRQKKIDAYAAMMVLERYFSTSGQGTELLVPKSLVLQDKLIEGPPTDPDFRD 235

[Close]

BLAST of IVF0017262 vs. ExPASy TrEMBL
Match: A0A5A7U5C1 (UPF0081 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00380 PE=4 SV=1)

HSP 1 Score: 359.8 bits (922), Expect = 8.9e-96
Identity = 178/181 (98.34%), Postives = 179/181 (98.90%), Query Frame = 0


Query: 1   MFTLLCGQCFQFQAFQFPLQSHRLLHSLHPHLPPPSPPALFSKSHNNNPFSSIELPPNAL 60
           MFTLLCGQCFQFQAFQFPLQSHRLLHSLHPHLPPPSPPALFSKSHNNNPFSSIELPPNAL
Sbjct: 1   MFTLLCGQCFQFQAFQFPLQSHRLLHSLHPHLPPPSPPALFSKSHNNNPFSSIELPPNAL 60

Query: 61  RRKLDPHWRGGFSLGVDLGTSRTGLALSKGFSIRPLTVLELRGQKLEAKLIQIAEQEEAD 120
           RRKLDPHWRGGFSLGVDLGTSRTGLALSKGFSIRPLTVLELRGQKLEAKLIQIAEQEEAD
Sbjct: 61  RRKLDPHWRGGFSLGVDLGTSRTGLALSKGFSIRPLTVLELRGQKLEAKLIQIAEQEEAD 120

Query: 121 EFIIGLPKSCDGKETPQSNKIRSIAGRVAARAAERGWRVYLYDEHGTTAEAESHMISKGL 180
           EFIIGLPKSCDGKETPQSNKIRSIAGRVAARAAERGWRVYLYDEHGTTAEAESHMIS  +
Sbjct: 121 EFIIGLPKSCDGKETPQSNKIRSIAGRVAARAAERGWRVYLYDEHGTTAEAESHMISNIV 180

Query: 181 N 182
           N
Sbjct: 181 N 181

[Close]

BLAST of IVF0017262 vs. ExPASy TrEMBL
Match: A0A1S4DSN6 (uncharacterized protein LOC103483114 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483114 PE=4 SV=1)

HSP 1 Score: 358.6 bits (919), Expect = 2.0e-95
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0


Query: 1   MFTLLCGQCFQFQAFQFPLQSHRLLHSLHPHLPPPSPPALFSKSHNNNPFSSIELPPNAL 60
           MFTLLCGQCFQFQAFQFPLQSHRLLHSLHPHLPPPSPPALFSKSHNNNPFSSIELPPNAL
Sbjct: 38  MFTLLCGQCFQFQAFQFPLQSHRLLHSLHPHLPPPSPPALFSKSHNNNPFSSIELPPNAL 97

Query: 61  RRKLDPHWRGGFSLGVDLGTSRTGLALSKGFSIRPLTVLELRGQKLEAKLIQIAEQEEAD 120
           RRKLDPHWRGGFSLGVDLGTSRTGLALSKGFSIRPLTVLELRGQKLEAKLIQIAEQEEAD
Sbjct: 98  RRKLDPHWRGGFSLGVDLGTSRTGLALSKGFSIRPLTVLELRGQKLEAKLIQIAEQEEAD 157

Query: 121 EFIIGLPKSCDGKETPQSNKIRSIAGRVAARAAERGWRVYLYDEHGTTAEAESHMIS 178
           EFIIGLPKSCDGKETPQSNKIRSIAGRVAARAAERGWRVYLYDEHGTTAEAESHMIS
Sbjct: 158 EFIIGLPKSCDGKETPQSNKIRSIAGRVAARAAERGWRVYLYDEHGTTAEAESHMIS 214

[Close]

BLAST of IVF0017262 vs. ExPASy TrEMBL
Match: A0A6J1CTB8 (uncharacterized protein LOC111014097 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111014097 PE=3 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 3.0e-91
Identity = 172/185 (92.97%), Postives = 179/185 (96.76%), Query Frame = 0


Query: 51  SSIELPPNALRRKLDPHWRGGFSLGVDLGTSRTGLALSKGFSIRPLTVLELRGQKLEAKL 110
           SSIELPPNALRRKLDPHWRGGFSLGVDLGTSRTGLALSKGFS RPLTVLELRG KLE KL
Sbjct: 52  SSIELPPNALRRKLDPHWRGGFSLGVDLGTSRTGLALSKGFSTRPLTVLELRGHKLEVKL 111

Query: 111 IQIAEQEEADEFIIGLPKSCDGKETPQSNKIRSIAGRVAARAAERGWRVYLYDEHGTTAE 170
           I+IAEQEEADEFIIGLPKS DGKETPQSNKIRSIAGRVAARAAERGWRVYL+DEHGTT+E
Sbjct: 112 IEIAEQEEADEFIIGLPKSSDGKETPQSNKIRSIAGRVAARAAERGWRVYLHDEHGTTSE 171

Query: 171 AESHMISKGLNKSTRQKKIDAYAAMMVLERYFLMSGQGTELLVPKSLVLQDKLIEGPPTD 230
           AE+HMI KGLNKSTRQKKIDAYAAMMVLERY+ MSGQGTEL+VPKSLVLQ+KLIEGPPTD
Sbjct: 172 AENHMICKGLNKSTRQKKIDAYAAMMVLERYYFMSGQGTELVVPKSLVLQEKLIEGPPTD 231

Query: 231 PDFKD 236
           PDFKD
Sbjct: 232 PDFKD 236

[Close]

BLAST of IVF0017262 vs. NCBI nr
Match: XP_008437782.1 (PREDICTED: uncharacterized protein LOC103483114 isoform X1 [Cucumis melo])

HSP 1 Score: 473 bits (1218), Expect = 7.83e-168
Identity = 235/235 (100.00%), Postives = 235/235 (100.00%), Query Frame = 0


Query: 1   MFTLLCGQCFQFQAFQFPLQSHRLLHSLHPHLPPPSPPALFSKSHNNNPFSSIELPPNAL 60
           MFTLLCGQCFQFQAFQFPLQSHRLLHSLHPHLPPPSPPALFSKSHNNNPFSSIELPPNAL
Sbjct: 38  MFTLLCGQCFQFQAFQFPLQSHRLLHSLHPHLPPPSPPALFSKSHNNNPFSSIELPPNAL 97

Query: 61  RRKLDPHWRGGFSLGVDLGTSRTGLALSKGFSIRPLTVLELRGQKLEAKLIQIAEQEEAD 120
           RRKLDPHWRGGFSLGVDLGTSRTGLALSKGFSIRPLTVLELRGQKLEAKLIQIAEQEEAD
Sbjct: 98  RRKLDPHWRGGFSLGVDLGTSRTGLALSKGFSIRPLTVLELRGQKLEAKLIQIAEQEEAD 157

Query: 121 EFIIGLPKSCDGKETPQSNKIRSIAGRVAARAAERGWRVYLYDEHGTTAEAESHMISKGL 180
           EFIIGLPKSCDGKETPQSNKIRSIAGRVAARAAERGWRVYLYDEHGTTAEAESHMISKGL
Sbjct: 158 EFIIGLPKSCDGKETPQSNKIRSIAGRVAARAAERGWRVYLYDEHGTTAEAESHMISKGL 217

Query: 181 NKSTRQKKIDAYAAMMVLERYFLMSGQGTELLVPKSLVLQDKLIEGPPTDPDFKD 235
           NKSTRQKKIDAYAAMMVLERYFLMSGQGTELLVPKSLVLQDKLIEGPPTDPDFKD
Sbjct: 218 NKSTRQKKIDAYAAMMVLERYFLMSGQGTELLVPKSLVLQDKLIEGPPTDPDFKD 272

[Close]

BLAST of IVF0017262 vs. NCBI nr
Match: XP_004133768.1 (uncharacterized protein LOC101219287 isoform X1 [Cucumis sativus] >KGN56353.1 hypothetical protein Csa_010577 [Cucumis sativus])

HSP 1 Score: 445 bits (1144), Expect = 3.90e-157
Identity = 221/235 (94.04%), Postives = 226/235 (96.17%), Query Frame = 0


Query: 1   MFTLLCGQCFQFQAFQFPLQSHRLLHSLHPHLPPPSPPALFSKSHNNNPFSSIELPPNAL 60
           MFT   GQCFQFQAFQFPLQ+H+LLHSLHPHLPPPS PAL SKSHNNNP SSIELPPNAL
Sbjct: 1   MFTWSSGQCFQFQAFQFPLQTHKLLHSLHPHLPPPSSPALISKSHNNNPISSIELPPNAL 60

Query: 61  RRKLDPHWRGGFSLGVDLGTSRTGLALSKGFSIRPLTVLELRGQKLEAKLIQIAEQEEAD 120
           RRKLDPHWRGGFSLGVDLGTSRTGLALSKGFS RPLTVLELRGQKLEAKLI+IAEQEEAD
Sbjct: 61  RRKLDPHWRGGFSLGVDLGTSRTGLALSKGFSTRPLTVLELRGQKLEAKLIEIAEQEEAD 120

Query: 121 EFIIGLPKSCDGKETPQSNKIRSIAGRVAARAAERGWRVYLYDEHGTTAEAESHMISKGL 180
           EFIIGLPKSCDGKETPQSNKIRSIAGRVAARAAERGWRVYLYDEHGTTAEAESHMIS+GL
Sbjct: 121 EFIIGLPKSCDGKETPQSNKIRSIAGRVAARAAERGWRVYLYDEHGTTAEAESHMISRGL 180

Query: 181 NKSTRQKKIDAYAAMMVLERYFLMSGQGTELLVPKSLVLQDKLIEGPPTDPDFKD 235
           NKSTRQKKIDAYAAMMVLERYF  SGQGTELLVPKSLVLQDKLIEGPPTDPDF+D
Sbjct: 181 NKSTRQKKIDAYAAMMVLERYFSTSGQGTELLVPKSLVLQDKLIEGPPTDPDFRD 235

[Close]

BLAST of IVF0017262 vs. NCBI nr
Match: XP_011650631.1 (uncharacterized protein LOC101219287 isoform X2 [Cucumis sativus])

HSP 1 Score: 373 bits (957), Expect = 3.17e-129
Identity = 184/196 (93.88%), Postives = 189/196 (96.43%), Query Frame = 0


Query: 1   MFTLLCGQCFQFQAFQFPLQSHRLLHSLHPHLPPPSPPALFSKSHNNNPFSSIELPPNAL 60
           MFT   GQCFQFQAFQFPLQ+H+LLHSLHPHLPPPS PAL SKSHNNNP SSIELPPNAL
Sbjct: 1   MFTWSSGQCFQFQAFQFPLQTHKLLHSLHPHLPPPSSPALISKSHNNNPISSIELPPNAL 60

Query: 61  RRKLDPHWRGGFSLGVDLGTSRTGLALSKGFSIRPLTVLELRGQKLEAKLIQIAEQEEAD 120
           RRKLDPHWRGGFSLGVDLGTSRTGLALSKGFS RPLTVLELRGQKLEAKLI+IAEQEEAD
Sbjct: 61  RRKLDPHWRGGFSLGVDLGTSRTGLALSKGFSTRPLTVLELRGQKLEAKLIEIAEQEEAD 120

Query: 121 EFIIGLPKSCDGKETPQSNKIRSIAGRVAARAAERGWRVYLYDEHGTTAEAESHMISKGL 180
           EFIIGLPKSCDGKETPQSNKIRSIAGRVAARAAERGWRVYLYDEHGTTAEAESHMIS+GL
Sbjct: 121 EFIIGLPKSCDGKETPQSNKIRSIAGRVAARAAERGWRVYLYDEHGTTAEAESHMISRGL 180

Query: 181 NKSTRQKKIDAYAAMM 196
           NKSTRQKKIDAYAAM+
Sbjct: 181 NKSTRQKKIDAYAAMV 196

[Close]

BLAST of IVF0017262 vs. NCBI nr
Match: XP_016898999.1 (PREDICTED: uncharacterized protein LOC103483114 isoform X2 [Cucumis melo])

HSP 1 Score: 361 bits (926), Expect = 5.38e-124
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0


Query: 1   MFTLLCGQCFQFQAFQFPLQSHRLLHSLHPHLPPPSPPALFSKSHNNNPFSSIELPPNAL 60
           MFTLLCGQCFQFQAFQFPLQSHRLLHSLHPHLPPPSPPALFSKSHNNNPFSSIELPPNAL
Sbjct: 38  MFTLLCGQCFQFQAFQFPLQSHRLLHSLHPHLPPPSPPALFSKSHNNNPFSSIELPPNAL 97

Query: 61  RRKLDPHWRGGFSLGVDLGTSRTGLALSKGFSIRPLTVLELRGQKLEAKLIQIAEQEEAD 120
           RRKLDPHWRGGFSLGVDLGTSRTGLALSKGFSIRPLTVLELRGQKLEAKLIQIAEQEEAD
Sbjct: 98  RRKLDPHWRGGFSLGVDLGTSRTGLALSKGFSIRPLTVLELRGQKLEAKLIQIAEQEEAD 157

Query: 121 EFIIGLPKSCDGKETPQSNKIRSIAGRVAARAAERGWRVYLYDEHGTTAEAESHMIS 177
           EFIIGLPKSCDGKETPQSNKIRSIAGRVAARAAERGWRVYLYDEHGTTAEAESHMIS
Sbjct: 158 EFIIGLPKSCDGKETPQSNKIRSIAGRVAARAAERGWRVYLYDEHGTTAEAESHMIS 214

[Close]

BLAST of IVF0017262 vs. NCBI nr
Match: KAA0048825.1 (UPF0081 domain-containing protein [Cucumis melo var. makuwa] >TYK20778.1 UPF0081 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 362 bits (929), Expect = 6.67e-124
Identity = 178/181 (98.34%), Postives = 179/181 (98.90%), Query Frame = 0


Query: 1   MFTLLCGQCFQFQAFQFPLQSHRLLHSLHPHLPPPSPPALFSKSHNNNPFSSIELPPNAL 60
           MFTLLCGQCFQFQAFQFPLQSHRLLHSLHPHLPPPSPPALFSKSHNNNPFSSIELPPNAL
Sbjct: 1   MFTLLCGQCFQFQAFQFPLQSHRLLHSLHPHLPPPSPPALFSKSHNNNPFSSIELPPNAL 60

Query: 61  RRKLDPHWRGGFSLGVDLGTSRTGLALSKGFSIRPLTVLELRGQKLEAKLIQIAEQEEAD 120
           RRKLDPHWRGGFSLGVDLGTSRTGLALSKGFSIRPLTVLELRGQKLEAKLIQIAEQEEAD
Sbjct: 61  RRKLDPHWRGGFSLGVDLGTSRTGLALSKGFSIRPLTVLELRGQKLEAKLIQIAEQEEAD 120

Query: 121 EFIIGLPKSCDGKETPQSNKIRSIAGRVAARAAERGWRVYLYDEHGTTAEAESHMISKGL 180
           EFIIGLPKSCDGKETPQSNKIRSIAGRVAARAAERGWRVYLYDEHGTTAEAESHMIS  +
Sbjct: 121 EFIIGLPKSCDGKETPQSNKIRSIAGRVAARAAERGWRVYLYDEHGTTAEAESHMISNIV 180

[Close]

BLAST of IVF0017262 vs. TAIR 10
Match: AT1G12244.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 259.2 bits (661), Expect = 3.1e-69
Identity = 123/180 (68.33%), Postives = 154/180 (85.56%), Query Frame = 0


Query: 54  ELPPNALRRKLDPHWRGGFSLGVDLGTSRTGLALSKGFSIRPLTVLELRGQKLEAKLIQI 113
           E+PPNA+RRK+D +WRGGFSLGVDLG SRTG+A+SKG++++PLTVL+ RGQKLE +L++I
Sbjct: 64  EIPPNAVRRKIDRNWRGGFSLGVDLGLSRTGIAISKGYTVKPLTVLKSRGQKLETRLLEI 123

Query: 114 AEQEEADEFIIGLPKSCDGKETPQSNKIRSIAGRVAARAAERGWRVYLYDEHGTTAEAES 173
           AE+EEADEFIIGLP+S DGKET QSNKIRS+AGR+A +AAERGWRVY++DEHGTT+EA  
Sbjct: 124 AEEEEADEFIIGLPRSSDGKETIQSNKIRSVAGRLAIQAAERGWRVYVFDEHGTTSEASD 183

Query: 174 HMISKGLNKSTRQKKIDAYAAMMVLERYFLMSGQGTELLVPKSLVLQDKLIEGPPTDPDF 233
            MI  GL+KS RQ + DAYAA+++LERYF   G G E+++PKSL LQ K+  G P DPDF
Sbjct: 184 RMIVMGLSKSERQNRSDAYAAVILLERYFSTQGLGIEIILPKSLELQAKIKNGAPVDPDF 243

The following BLAST results are available for this feature:

BLAST of IVF0017262 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A1SJC8	1.0e-11	36.50	Putative pre-16S rRNA nuclease OS=Nocardioides sp. (strain ATCC BAA-499 / JS614)...	[more]
A5D3C3	5.5e-10	31.65	Putative pre-16S rRNA nuclease OS=Pelotomaculum thermopropionicum (strain DSM 13...	[more]
Q3SR28	7.2e-10	33.58	Putative pre-16S rRNA nuclease OS=Nitrobacter winogradskyi (strain ATCC 25391 / ...	[more]
B8DIJ5	1.2e-09	29.77	Putative pre-16S rRNA nuclease OS=Desulfovibrio vulgaris (strain DSM 19637 / Miy...	[more]
C6C125	1.6e-09	32.06	Putative pre-16S rRNA nuclease OS=Desulfovibrio salexigens (strain ATCC 14822 / ...	[more]

BLAST of IVF0017262 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3AUT7	2.1e-129	100.00	uncharacterized protein LOC103483114 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0L3L5	8.0e-121	94.04	YqgFc domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G116900 PE=3 ...	[more]
A0A5A7U5C1	8.9e-96	98.34	UPF0081 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S4DSN6	2.0e-95	100.00	uncharacterized protein LOC103483114 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1CTB8	3.0e-91	92.97	uncharacterized protein LOC111014097 isoform X1 OS=Momordica charantia OX=3673 G...	[more]

BLAST of IVF0017262 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008437782.1	7.83e-168	100.00	PREDICTED: uncharacterized protein LOC103483114 isoform X1 [Cucumis melo]	[more]
XP_004133768.1	3.90e-157	94.04	uncharacterized protein LOC101219287 isoform X1 [Cucumis sativus] >KGN56353.1 hy...	[more]
XP_011650631.1	3.17e-129	93.88	uncharacterized protein LOC101219287 isoform X2 [Cucumis sativus]	[more]
XP_016898999.1	5.38e-124	100.00	PREDICTED: uncharacterized protein LOC103483114 isoform X2 [Cucumis melo]	[more]
KAA0048825.1	6.67e-124	98.34	UPF0081 domain-containing protein [Cucumis melo var. makuwa] >TYK20778.1 UPF0081...	[more]

BLAST of IVF0017262 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G12244.1	3.1e-69	68.33	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006641	YqgF/RNase H-like domain	SMART	SM00732	rnase_8s	coord: 71..171 e-value: 3.6E-18 score: 76.4
IPR005227	Putative pre-16S rRNA nuclease	PFAM	PF03652	RuvX	coord: 73..202 e-value: 1.5E-28 score: 99.8
IPR005227	Putative pre-16S rRNA nuclease	TIGRFAM	TIGR00250	TIGR00250	coord: 74..202 e-value: 1.5E-19 score: 68.3
IPR005227	Putative pre-16S rRNA nuclease	PANTHER	PTHR33317	POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN	coord: 43..233
IPR005227	Putative pre-16S rRNA nuclease	HAMAP	MF_00651	Nuclease_YqgF	coord: 71..206 score: 16.67522
IPR005227	Putative pre-16S rRNA nuclease	CDD	cd16964	YqgF	coord: 74..202 e-value: 4.66886E-39 score: 129.915
IPR037027	YqgF/RNase H-like domain superfamily	GENE3D	3.30.420.140		coord: 73..209 e-value: 1.0E-32 score: 115.0
None	No IPR available	PANTHER	PTHR33317:SF4	POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN	coord: 43..233
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 72..202

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0017262.1	IVF0017262.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000967	rRNA 5'-end processing
biological_process	GO:0006139	nucleobase-containing compound metabolic process
biological_process	GO:0006364	rRNA processing