IVF0017203 (gene) Melon (IVF77) v1

Overview


Name	IVF0017203
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	regulation of nuclear pre-mRNA domain-containing protein 1B
Location	chr07: 21063856 .. 21066871 (-)
RNA-Seq Expression	IVF0017203
Synteny	IVF0017203

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATAGTGTGTTCAGTGAGCAAATACTTGCTGATAAGCTGTCGAAGCTCAATAGCACGCAGCAGTGTATTGAAAGTATCCTTTTTTATTTCGTTTTTGTTACCCCATTTGGGTTTCTGGTTTTCTTTTTTCTTCTTGTCTTTAGTTAGTTAGTGTTCGAAAGCTTCCAATCGATAATTTTTTGCTTAGTTCGTTTTTGTTTGAGCCTGCCCACTTTATCTTCTGTTGTTTTAACTCTCTAGGGCCTAGAGGTTGATTGATTAATTATACCCTTCAAAACTTGGATTGGGATTTTATAGAATTTGGGTATTACACTTCAAATGTGTTTTTTTTCTTAAGGGTTTTTGTAATATGATCTCTTTGGTATTGTTGCTTATTAGAAAGTGTTGTTAATTTAAGTGTTGTTAATTCTGTTATCTTTGGTGTTAGCTTATGTCATCAATGTTGAATTTGTTACAAGAGATGTTTCTGTCATACTTAACTATTTTCCTGTAGCTTTGTCACATTGGTGTATATTTCATAGAGGCAAGGCTGAATTGGTTGTTGCAACATGGGATAAGCAGTTCCACAATTCTGAAATGGTTCAGAAAGTTCCTCTTTTGTATCTTGCTAATGATATCTTACAAAACAGTAAGCGTAAGGGAAATGAATTTGTTACTGAGTTCTGGAAGGTTCTTCCATCAGCGCTTAAGGATGTCCTTGAGAATGGTGACAGCCATGGAAAGAATGTAATTTCTAGATTGGTAAGTTTGAGTTATTTTATTTCCTCTTCTCGGATGAGTGGTCTAACTCTCTTGCATATCTTAAGATTTTCTACTAAATGTGTTGGTGAATACTGATAAAAATTGAAGATGCAATTAATGGAATTTATCAGGATAGCTACTCCATTTTATTGAGTATTGGAGATTGTTGTCATGTACTTATGTCTACTAAAAATGAAGAAATTGCGGATTCCTTGAGCATGAAATTTTTTCAGAAAGTACTTCCTGTTCCAGGATCTTATTCTACGGCCTTTATTGCCTTTTTCCTTCCTTTGAACTTGTCAATCAAATTTTTCTTGCACCTTCTTAGGTAGATATATGGGAACAAAGGAAGGTATTTGGATCCCGGACTCGAAGCCTCAAAGATGTAATACTTGGGGAAGAGGCACCTCCACCTCTAGAGTTTAGCAAAAAAACGCACTCGATCAGTCAGAATTGTCAAAAGAGATTCACGGTCAATTAGAACAGTGAGTGACTATTTTATCTTCAGCTTTTCTTCCAATTATCTTTTGGTGGTACCAGAAGGTTATGCAAGACTTTGTCTTGATTTTCCATGACTGTTTCCATTTAGTTTTCTTATTATCAATATATATAACCTCCCAATGATTTCATTGCCGAGTTGACATTATTCCTTAATTTGGTACGCAGAAATTGTCTATTGGAAGTGCAGCTGAAAAAATAGTATCAGCATTCCACCTGGTCCTTAGTGAATATTCTAATGAAGAAACTGAGATGACCAACTGTATTTCTGCAGTTCAACGCGTAAGGAAGATGGAAAATGACGTTGATTTTGCTTGTTCCATGGGTATGACAACAATGTTTTAATGTTGTCTGCATTGTCTAAATGTTCTCCATATGCATCTAATTTGTTTTGAAAGATTTGTACTCTTAGTTGAGATTTATTAGTATCCCATCTTTCATTTGTCAAATTATACAGTCTCTGAGTTTCTATCCTTATCCACCAGCAAAAAATCCCCAGCGTAAAAAGTTAGCCAAAGAACTGGAAGAGGAAGAAAGTGTTCTGAAACAGTGTATTGAGAAATTGCAATCGGTTGAAGCCAGTCGGCTGGCACTTATCTCTCAGTTAAAAGAAGCTTTGCATGTTCAGGTATCTTGATCAATCATTTCTCAGTTCCTTAGAAGTTTGATCAATTTTGATTTCTGTATTACATTATGAAGTACTGACAATTGACAAATTTGGGAAACTGGACAATTAACTGTAGGAATCGGAGCTGGAGAATATTCGAACCCAGATGCAGGTATTTTCTTGAGTGTAATAGACTTGTTTTGCTTGTGCTTGTACTTCACATTTATTAGAACTTCAACATGAATGGTTTTATAATATGAAAGTGAGTGACTGGCTAGTTATATGGAGGAAATATGAAGCTTTACCGTGGACACCTATAATTTAGTTCATGTGAATTTGATGGGTGCTGATGATTGAGTTTTTTGTTACCATTACTCATTTTGTTTTGAACTTCAAAAACTACAGGTAGCTCAGGCTCAAGCAGAAGAGGCTAAAAATATGCAAAACCGGCTAAATGATGAAGGTTATCTATCGAAAACTTCCATCACTGATTCAAATGCAAAAATGGGACAGACTCCTAAGAAGTCGGCTGCAGCCATTGCAGCAGAGGTTGCTGACAAGCTTGCAGCTTCTAGCTCCTCTCAAATGATCATGACATCGGTTCTCTCCACATTTGCGGCTGAGGAGGCAAAGCATACTGGTCTAACAAAGAACAATAATGGATTGAATGCATTTGCATCGAAGCCCATGCGTTCCTCTGCTAATTCTATTACAAAACCTGAAGCTTCAGCCGTTGGTTCAGATCCTAATGTTTTCATGTCCATGCAGCCCCTTCCTGCTCCCGCTAACCATTCATATCAATCAGTTATGGTGCCCCAACCAACAATGCAGAGCCAAGCCTCAAATTCACAGACTCAGTATCAGATGCTTCCAAGTGCACCTTCTCAGCAATATTTGCAGCTCTCAAATGGAGTCTTAACCCCATATGGTTATGGTAGTCTTCCAAACTCAACTCCGGTACCACCACCACCGATGCCCCACATGGTTAGTCCAGTGGTGCCCTTGACCCAGCAGATGCTGCAACAGACAATACCTTTGGCTCAACAACCATCACCTATGATACAAACACAACCGGTACCTTTCACGCAGCAACCTCTAGCACCTAGTTTTAGACCGCTTCAGCCGCCGGGGATGGTGTATTATGGTCATCCTCCCCCTTCTCAGTGA

mRNA sequence

ATGAATAGTGTGTTCAGTGAGCAAATACTTGCTGATAAGCTGTCGAAGCTCAATAGCACGCAGCAGTGTATTGAAACTTTGTCACATTGGTGTATATTTCATAGAGGCAAGGCTGAATTGGTTGTTGCAACATGGGATAAGCAGTTCCACAATTCTGAAATGGTTCAGAAAGTTCCTCTTTTGTATCTTGCTAATGATATCTTACAAAACAGTAAGCGTAAGGGAAATGAATTTGTTACTGAGTTCTGGAAGGTTCTTCCATCAGCGCTTAAGGATGTCCTTGAGAATGGTGACAGCCATGGAAAGAATGTAATTTCTAGATTGGTAGATATATGGGAACAAAGGAAGGTATTTGGATCCCGGACTCGAAGCCTCAAAGATGTAATACTTGGGGAAGAGGCACCTCCACCTCTAGAGTTTAGCAAAAAAACGCACTCGATCAGTCAGAATTGTCAAAAGAGATTCACGAAATTGTCTATTGGAAGTGCAGCTGAAAAAATAGTATCAGCATTCCACCTGGTCCTTAGTGAATATTCTAATGAAGAAACTGAGATGACCAACTGTATTTCTGCAGTTCAACGCGTAAGGAAGATGGAAAATGACGTTGATTTTGCTTGTTCCATGGCAAAAAATCCCCAGCGTAAAAAGTTAGCCAAAGAACTGGAAGAGGAAGAAAGTGTTCTGAAACAGTGTATTGAGAAATTGCAATCGGTTGAAGCCAGTCGGCTGGCACTTATCTCTCAGTTAAAAGAAGCTTTGCATGTTCAGGAATCGGAGCTGGAGAATATTCGAACCCAGATGCAGGTAGCTCAGGCTCAAGCAGAAGAGGCTAAAAATATGCAAAACCGGCTAAATGATGAAGGTTATCTATCGAAAACTTCCATCACTGATTCAAATGCAAAAATGGGACAGACTCCTAAGAAGTCGGCTGCAGCCATTGCAGCAGAGGTTGCTGACAAGCTTGCAGCTTCTAGCTCCTCTCAAATGATCATGACATCGGTTCTCTCCACATTTGCGGCTGAGGAGGCAAAGCATACTGGTCTAACAAAGAACAATAATGGATTGAATGCATTTGCATCGAAGCCCATGCGTTCCTCTGCTAATTCTATTACAAAACCTGAAGCTTCAGCCGTTGGTTCAGATCCTAATGTTTTCATGTCCATGCAGCCCCTTCCTGCTCCCGCTAACCATTCATATCAATCAGTTATGGTGCCCCAACCAACAATGCAGAGCCAAGCCTCAAATTCACAGACTCAGTATCAGATGCTTCCAAGTGCACCTTCTCAGCAATATTTGCAGCTCTCAAATGGAGTCTTAACCCCATATGGTTATGGTAGTCTTCCAAACTCAACTCCGGTACCACCACCACCGATGCCCCACATGGTTAGTCCAGTGGTGCCCTTGACCCAGCAGATGCTGCAACAGACAATACCTTTGGCTCAACAACCATCACCTATGATACAAACACAACCGGTACCTTTCACGCAGCAACCTCTAGCACCTAGTTTTAGACCGCTTCAGCCGCCGGGGATGGTGTATTATGGTCATCCTCCCCCTTCTCAGTGA

Coding sequence (CDS)

ATGAATAGTGTGTTCAGTGAGCAAATACTTGCTGATAAGCTGTCGAAGCTCAATAGCACGCAGCAGTGTATTGAAACTTTGTCACATTGGTGTATATTTCATAGAGGCAAGGCTGAATTGGTTGTTGCAACATGGGATAAGCAGTTCCACAATTCTGAAATGGTTCAGAAAGTTCCTCTTTTGTATCTTGCTAATGATATCTTACAAAACAGTAAGCGTAAGGGAAATGAATTTGTTACTGAGTTCTGGAAGGTTCTTCCATCAGCGCTTAAGGATGTCCTTGAGAATGGTGACAGCCATGGAAAGAATGTAATTTCTAGATTGGTAGATATATGGGAACAAAGGAAGGTATTTGGATCCCGGACTCGAAGCCTCAAAGATGTAATACTTGGGGAAGAGGCACCTCCACCTCTAGAGTTTAGCAAAAAAACGCACTCGATCAGTCAGAATTGTCAAAAGAGATTCACGAAATTGTCTATTGGAAGTGCAGCTGAAAAAATAGTATCAGCATTCCACCTGGTCCTTAGTGAATATTCTAATGAAGAAACTGAGATGACCAACTGTATTTCTGCAGTTCAACGCGTAAGGAAGATGGAAAATGACGTTGATTTTGCTTGTTCCATGGCAAAAAATCCCCAGCGTAAAAAGTTAGCCAAAGAACTGGAAGAGGAAGAAAGTGTTCTGAAACAGTGTATTGAGAAATTGCAATCGGTTGAAGCCAGTCGGCTGGCACTTATCTCTCAGTTAAAAGAAGCTTTGCATGTTCAGGAATCGGAGCTGGAGAATATTCGAACCCAGATGCAGGTAGCTCAGGCTCAAGCAGAAGAGGCTAAAAATATGCAAAACCGGCTAAATGATGAAGGTTATCTATCGAAAACTTCCATCACTGATTCAAATGCAAAAATGGGACAGACTCCTAAGAAGTCGGCTGCAGCCATTGCAGCAGAGGTTGCTGACAAGCTTGCAGCTTCTAGCTCCTCTCAAATGATCATGACATCGGTTCTCTCCACATTTGCGGCTGAGGAGGCAAAGCATACTGGTCTAACAAAGAACAATAATGGATTGAATGCATTTGCATCGAAGCCCATGCGTTCCTCTGCTAATTCTATTACAAAACCTGAAGCTTCAGCCGTTGGTTCAGATCCTAATGTTTTCATGTCCATGCAGCCCCTTCCTGCTCCCGCTAACCATTCATATCAATCAGTTATGGTGCCCCAACCAACAATGCAGAGCCAAGCCTCAAATTCACAGACTCAGTATCAGATGCTTCCAAGTGCACCTTCTCAGCAATATTTGCAGCTCTCAAATGGAGTCTTAACCCCATATGGTTATGGTAGTCTTCCAAACTCAACTCCGGTACCACCACCACCGATGCCCCACATGGTTAGTCCAGTGGTGCCCTTGACCCAGCAGATGCTGCAACAGACAATACCTTTGGCTCAACAACCATCACCTATGATACAAACACAACCGGTACCTTTCACGCAGCAACCTCTAGCACCTAGTTTTAGACCGCTTCAGCCGCCGGGGATGGTGTATTATGGTCATCCTCCCCCTTCTCAGTGA

Protein sequence

MNSVFSEQILADKLSKLNSTQQCIETLSHWCIFHRGKAELVVATWDKQFHNSEMVQKVPLLYLANDILQNSKRKGNEFVTEFWKVLPSALKDVLENGDSHGKNVISRLVDIWEQRKVFGSRTRSLKDVILGEEAPPPLEFSKKTHSISQNCQKRFTKLSIGSAAEKIVSAFHLVLSEYSNEETEMTNCISAVQRVRKMENDVDFACSMAKNPQRKKLAKELEEEESVLKQCIEKLQSVEASRLALISQLKEALHVQESELENIRTQMQVAQAQAEEAKNMQNRLNDEGYLSKTSITDSNAKMGQTPKKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAKHTGLTKNNNGLNAFASKPMRSSANSITKPEASAVGSDPNVFMSMQPLPAPANHSYQSVMVPQPTMQSQASNSQTQYQMLPSAPSQQYLQLSNGVLTPYGYGSLPNSTPVPPPPMPHMVSPVVPLTQQMLQQTIPLAQQPSPMIQTQPVPFTQQPLAPSFRPLQPPGMVYYGHPPPSQ

Homology

[Close]

BLAST of IVF0017203 vs. ExPASy Swiss-Prot
Match: Q9CSU0 (Regulation of nuclear pre-mRNA domain-containing protein 1B OS=Mus musculus OX=10090 GN=Rprd1b PE=1 SV=2)

HSP 1 Score: 112.8 bits (281), Expect = 1.1e-23
Identity = 91/298 (30.54%), Postives = 144/298 (48.32%), Query Frame = 0


Query: 3   SVFSEQILADKLSKLNSTQQCIETLSHWCIFHRGKAELVVATWDKQFHNSEMVQKVPLLY 62
           S FSE  L  KLS+L+++QQ ++TLS W I HR  A  +V+ W ++   ++  +K+  LY
Sbjct: 2   SSFSESALEKKLSELSNSQQSVQTLSLWLIHHRKHAGPIVSVWHRELRKAKSNRKLTFLY 61

Query: 63  LANDILQNSKRKGNEFVTEFWKVLPSALKDVLENGDSHGKNVISRLVDIWEQRKVFGSR- 122
           LAND++QNSKRKG EF  EF  VL  A   V    D   K  + RL++IW++R V+G   
Sbjct: 62  LANDVIQNSKRKGPEFTREFESVLVDAFSHVAREADEGCKKPLERLLNIWQERSVYGGEF 121

Query: 123 TRSLKDVILGEEAPPP--LEFSKKTHSISQNCQKRFTKLSIGSAAEKIVSAFHLVLSEYS 182
            + LK  +   ++PPP   E  K      Q  Q+       GS + +  SA  L+  E  
Sbjct: 122 IQQLKLSMEDSKSPPPKAAEEKKSLKRTFQQIQEEEDDDYPGSYSPQDPSAGPLLTEELI 181

Query: 183 NEETEMTNCISAVQRVRKM-------ENDVDFACSMAKNPQRKKLAKELEEEESVLKQCI 242
               ++ N  S    VR+          DV     +      ++L+K ++E   +L +  
Sbjct: 182 KALQDLENAASGDATVRQKIASLPQEVQDVSLLEKITDKEAAERLSKTVDEACLLLAEYN 241

Query: 243 EKLQSVEASRLALISQL-------KEALHVQESELENIRTQM-QVAQAQAEEAKNMQN 283
            +L +    R  L   L       KE L  +E +LE  + ++ +V Q + E   ++Q+
Sbjct: 242 GRLAAELEDRRQLARMLVEYTQNQKEVLSEKEKKLEEYKQKLARVTQVRKELKSHIQS 299

[Close]

BLAST of IVF0017203 vs. ExPASy Swiss-Prot
Match: Q9NQG5 (Regulation of nuclear pre-mRNA domain-containing protein 1B OS=Homo sapiens OX=9606 GN=RPRD1B PE=1 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 2.5e-23
Identity = 90/298 (30.20%), Postives = 144/298 (48.32%), Query Frame = 0


Query: 3   SVFSEQILADKLSKLNSTQQCIETLSHWCIFHRGKAELVVATWDKQFHNSEMVQKVPLLY 62
           S FSE  L  KLS+L+++QQ ++TLS W I HR  A  +V+ W ++   ++  +K+  LY
Sbjct: 2   SSFSESALEKKLSELSNSQQSVQTLSLWLIHHRKHAGPIVSVWHRELRKAKSNRKLTFLY 61

Query: 63  LANDILQNSKRKGNEFVTEFWKVLPSALKDVLENGDSHGKNVISRLVDIWEQRKVFGSR- 122
           LAND++QNSKRKG EF  EF  VL  A   V    D   K  + RL++IW++R V+G   
Sbjct: 62  LANDVIQNSKRKGPEFTREFESVLVDAFSHVAREADEGCKKPLERLLNIWQERSVYGGEF 121

Query: 123 TRSLKDVILGEEAPPP--LEFSKKTHSISQNCQKRFTKLSIGSAAEKIVSAFHLVLSEYS 182
            + LK  +   ++PPP   E  K      Q  Q+       GS + +  SA  L+  E  
Sbjct: 122 IQQLKLSMEDSKSPPPKATEEKKSLKRTFQQIQEEEDDDYPGSYSPQDPSAGPLLTEELI 181

Query: 183 NEETEMTNCISAVQRVRKM-------ENDVDFACSMAKNPQRKKLAKELEEEESVLKQCI 242
               ++ N  S    VR+          DV     +      ++L+K ++E   +L +  
Sbjct: 182 KALQDLENAASGDATVRQKIASLPQEVQDVSLLEKITDKEAAERLSKTVDEACLLLAEYN 241

Query: 243 EKLQSVEASRLALISQL-------KEALHVQESELENIRTQM-QVAQAQAEEAKNMQN 283
            +L +    R  L   L       K+ L  +E +LE  + ++ +V Q + E   ++Q+
Sbjct: 242 GRLAAELEDRRQLARMLVEYTQNQKDVLSEKEKKLEEYKQKLARVTQVRKELKSHIQS 299

[Close]

BLAST of IVF0017203 vs. ExPASy Swiss-Prot
Match: Q0P5J9 (Regulation of nuclear pre-mRNA domain-containing protein 1A OS=Bos taurus OX=9913 GN=RPRD1A PE=2 SV=2)

HSP 1 Score: 104.4 bits (259), Expect = 4.0e-21
Identity = 84/295 (28.47%), Postives = 143/295 (48.47%), Query Frame = 0


Query: 3   SVFSEQILADKLSKLNSTQQCIETLSHWCIFHRGKAELVVATWDKQFHNSEMVQKVPLLY 62
           S FSE  L  KLS+L+++QQ ++TLS W I HR  +  +V  W+++   ++  +K+  LY
Sbjct: 2   SAFSEAALEKKLSELSNSQQSVQTLSLWLIHHRKHSRPIVTVWERELRKAKPNRKLTFLY 61

Query: 63  LANDILQNSKRKGNEFVTEFWKVLPSALKDVLENGDSHGKNVISRLVDIWEQRKVFGSRT 122
           LAND++QNSKRKG EF  +F  V+  A K V    D   K  + R++ IWE+R V+ +  
Sbjct: 62  LANDVIQNSKRKGPEFTKDFAPVIVEAFKHVSSETDESCKKHLGRVLSIWEERSVYENDV 121

Query: 123 -RSLKDVILGEEAPPPLEFSKKTHSISQNCQKRFTKLSIGSAAEKIVSAFHLVLSEYSNE 182
              LK  + G++ P    + +     ++NC       S+GS +E       LV +   + 
Sbjct: 122 LEQLKQALYGDKKPRKRTYEQIKVDENENCS------SLGSPSEP-PQTLDLVRA-LQDL 181

Query: 183 ETEMTNCISAVQRVRKMENDVDFACSMAKNPQR---KKLAKELEEEESVLKQCIEKLQSV 242
           E   +   +  QR+  +  +V     + K   +   ++L+K +E+   +L     +L + 
Sbjct: 182 ENAASGDAAVHQRIASLPVEVQEVSLLDKITDKESGERLSKMVEDACMLLADYNGRLAAE 241

Query: 243 EASRLALISQL-------KEALHVQESELENIRTQMQVAQAQAEEAKNMQNRLND 287
              R  L   L       KEAL  +E +LE  + ++       +E ++    L D
Sbjct: 242 IDDRKQLTRMLADFLRCQKEALAEKEHKLEEYKRKLARVSLVRKELRSRIQSLPD 288

[Close]

BLAST of IVF0017203 vs. ExPASy Swiss-Prot
Match: Q96P16 (Regulation of nuclear pre-mRNA domain-containing protein 1A OS=Homo sapiens OX=9606 GN=RPRD1A PE=1 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 4.0e-21
Identity = 84/295 (28.47%), Postives = 143/295 (48.47%), Query Frame = 0


Query: 3   SVFSEQILADKLSKLNSTQQCIETLSHWCIFHRGKAELVVATWDKQFHNSEMVQKVPLLY 62
           S FSE  L  KLS+L+++QQ ++TLS W I HR  +  +V  W+++   ++  +K+  LY
Sbjct: 2   SAFSEAALEKKLSELSNSQQSVQTLSLWLIHHRKHSRPIVTVWERELRKAKPNRKLTFLY 61

Query: 63  LANDILQNSKRKGNEFVTEFWKVLPSALKDVLENGDSHGKNVISRLVDIWEQRKVFGSRT 122
           LAND++QNSKRKG EF  +F  V+  A K V    D   K  + R++ IWE+R V+ +  
Sbjct: 62  LANDVIQNSKRKGPEFTKDFAPVIVEAFKHVSSETDESCKKHLGRVLSIWEERSVYENDV 121

Query: 123 -RSLKDVILGEEAPPPLEFSKKTHSISQNCQKRFTKLSIGSAAEKIVSAFHLVLSEYSNE 182
              LK  + G++ P    + +     ++NC       S+GS +E       LV +   + 
Sbjct: 122 LEQLKQALYGDKKPRKRTYEQIKVDENENCS------SLGSPSEP-PQTLDLVRA-LQDL 181

Query: 183 ETEMTNCISAVQRVRKMENDVDFACSMAKNPQR---KKLAKELEEEESVLKQCIEKLQSV 242
           E   +   +  QR+  +  +V     + K   +   ++L+K +E+   +L     +L + 
Sbjct: 182 ENAASGDAAVHQRIASLPVEVQEVSLLDKITDKESGERLSKMVEDACMLLADYNGRLAAE 241

Query: 243 EASRLALISQL-------KEALHVQESELENIRTQMQVAQAQAEEAKNMQNRLND 287
              R  L   L       KEAL  +E +LE  + ++       +E ++    L D
Sbjct: 242 IDDRKQLTRMLADFLRCQKEALAEKEHKLEEYKRKLARVSLVRKELRSRIQSLPD 288

[Close]

BLAST of IVF0017203 vs. ExPASy Swiss-Prot
Match: Q5R8Y3 (Regulation of nuclear pre-mRNA domain-containing protein 1A OS=Pongo abelii OX=9601 GN=RPRD1A PE=2 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 4.0e-21
Identity = 84/295 (28.47%), Postives = 143/295 (48.47%), Query Frame = 0


Query: 3   SVFSEQILADKLSKLNSTQQCIETLSHWCIFHRGKAELVVATWDKQFHNSEMVQKVPLLY 62
           S FSE  L  KLS+L+++QQ ++TLS W I HR  +  +V  W+++   ++  +K+  LY
Sbjct: 2   SAFSEAALEKKLSELSNSQQSVQTLSLWLIHHRKHSRPIVTVWERELRKAKPNRKLTFLY 61

Query: 63  LANDILQNSKRKGNEFVTEFWKVLPSALKDVLENGDSHGKNVISRLVDIWEQRKVFGSRT 122
           LAND++QNSKRKG EF  +F  V+  A K V    D   K  + R++ IWE+R V+ +  
Sbjct: 62  LANDVIQNSKRKGPEFTKDFAPVIVEAFKHVSSETDESCKKHLGRVLSIWEERSVYENDV 121

Query: 123 -RSLKDVILGEEAPPPLEFSKKTHSISQNCQKRFTKLSIGSAAEKIVSAFHLVLSEYSNE 182
              LK  + G++ P    + +     ++NC       S+GS +E       LV +   + 
Sbjct: 122 LEQLKQALYGDKKPRKRTYEQIKVDENENCS------SLGSPSEP-PQTLDLVRA-LQDL 181

Query: 183 ETEMTNCISAVQRVRKMENDVDFACSMAKNPQR---KKLAKELEEEESVLKQCIEKLQSV 242
           E   +   +  QR+  +  +V     + K   +   ++L+K +E+   +L     +L + 
Sbjct: 182 ENAASGDAAVHQRIASLPVEVQEVSLLDKITDKESGERLSKMVEDACMLLADYNGRLAAE 241

Query: 243 EASRLALISQL-------KEALHVQESELENIRTQMQVAQAQAEEAKNMQNRLND 287
              R  L   L       KEAL  +E +LE  + ++       +E ++    L D
Sbjct: 242 IDDRKQLTRMLADFLRCQKEALAEKEHKLEEYKRKLARVSLVRKELRSRIQSLPD 288

[Close]

BLAST of IVF0017203 vs. ExPASy TrEMBL
Match: A0A5A7TML3 (Regulation of nuclear pre-mRNA domain-containing protein 1B OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G00170 PE=4 SV=1)

HSP 1 Score: 952.6 bits (2461), Expect = 6.9e-274
Identity = 509/525 (96.95%), Postives = 513/525 (97.71%), Query Frame = 0


Query: 1   MNSVFSEQILADKLSKLNSTQQCIETLSHWCIFHRGKAELVVATWDKQFHNSEMVQKVPL 60
           MNSVFSEQILADKLSKLNSTQQCIETLSHWCIFHRGKAELVVATWDKQFHNSEMVQKVPL
Sbjct: 358 MNSVFSEQILADKLSKLNSTQQCIETLSHWCIFHRGKAELVVATWDKQFHNSEMVQKVPL 417

Query: 61  LYLANDILQNSKRKGNEFVTEFWKVLPSALKDVLENGDSHGKNVISRLVDIWEQRKVFGS 120
           LYLANDILQNSKRKGNEFVTEFWKVLPSALKDVLENGDSHGKNVISRLVDIWEQRKVFGS
Sbjct: 418 LYLANDILQNSKRKGNEFVTEFWKVLPSALKDVLENGDSHGKNVISRLVDIWEQRKVFGS 477

Query: 121 RTRSLKDVILGEEAPPPLEFSKK----THSISQNCQKRFTKLSIGSAAEKIVSAFHLVLS 180
           RTRSLKDVILGEEAPPPLEFSKK       + ++ +   TKLSIGSAAEKIVSAFHLVLS
Sbjct: 478 RTRSLKDVILGEEAPPPLEFSKKRTRSVRIVKRDSRSIRTKLSIGSAAEKIVSAFHLVLS 537

Query: 181 EYSNEETEMTNCISAVQRVRKMENDVDFACSMAKNPQRKKLAKELEEEESVLKQCIEKLQ 240
           EYSNEETEMTNCISAVQRVRKMENDVDFACSMAKNPQRKKLAKELEEEESVLKQCIEKLQ
Sbjct: 538 EYSNEETEMTNCISAVQRVRKMENDVDFACSMAKNPQRKKLAKELEEEESVLKQCIEKLQ 597

Query: 241 SVEASRLALISQLKEALHVQESELENIRTQMQVAQAQAEEAKNMQNRLNDEGYLSKTSIT 300
           SVEASRLALISQLKEALHVQESELENIRTQMQVAQAQAEEAKNMQNRLNDEGYLSKTSIT
Sbjct: 598 SVEASRLALISQLKEALHVQESELENIRTQMQVAQAQAEEAKNMQNRLNDEGYLSKTSIT 657

Query: 301 DSNAKMGQTPKKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAKHTGLTKNNNGLN 360
           DSNAKMGQTPKKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAKHTGLTKNNNGLN
Sbjct: 658 DSNAKMGQTPKKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAKHTGLTKNNNGLN 717

Query: 361 AFASKPMRSSANSITKPEASAVGSDPNVFMSMQPLPAPANHSYQSVMVPQPTMQSQASNS 420
           AFASKPMRSSANSITKPEASAVGSDPNVFMSMQPLPAPANHSYQSVMVPQPTMQSQASNS
Sbjct: 718 AFASKPMRSSANSITKPEASAVGSDPNVFMSMQPLPAPANHSYQSVMVPQPTMQSQASNS 777

Query: 421 QTQYQMLPSAPSQQYLQLSNGVLTPYGYGSLPNSTPVPPPPMPHMVSPVVPLTQQMLQQT 480
           QTQYQMLPSAPSQQYLQLSNGVLTPYGYGSLPNSTPVPPPPMPHMVSPVVPLTQQMLQQT
Sbjct: 778 QTQYQMLPSAPSQQYLQLSNGVLTPYGYGSLPNSTPVPPPPMPHMVSPVVPLTQQMLQQT 837

Query: 481 IPLAQQPSPMIQTQPVPFTQQPLAPSFRPLQPPGMVYYGHPPPSQ 522
           IPLAQQPSPMIQTQPVPFTQQPLAPSFRPLQPPGMVYYGHPPPSQ
Sbjct: 838 IPLAQQPSPMIQTQPVPFTQQPLAPSFRPLQPPGMVYYGHPPPSQ 882

[Close]

BLAST of IVF0017203 vs. ExPASy TrEMBL
Match: A0A1S3BWJ3 (regulation of nuclear pre-mRNA domain-containing protein 1B OS=Cucumis melo OX=3656 GN=LOC103494401 PE=4 SV=1)

HSP 1 Score: 952.6 bits (2461), Expect = 6.9e-274
Identity = 509/525 (96.95%), Postives = 513/525 (97.71%), Query Frame = 0


Query: 1   MNSVFSEQILADKLSKLNSTQQCIETLSHWCIFHRGKAELVVATWDKQFHNSEMVQKVPL 60
           MNSVFSEQILADKLSKLNSTQQCIETLSHWCIFHRGKAELVVATWDKQFHNSEMVQKVPL
Sbjct: 1   MNSVFSEQILADKLSKLNSTQQCIETLSHWCIFHRGKAELVVATWDKQFHNSEMVQKVPL 60

Query: 61  LYLANDILQNSKRKGNEFVTEFWKVLPSALKDVLENGDSHGKNVISRLVDIWEQRKVFGS 120
           LYLANDILQNSKRKGNEFVTEFWKVLPSALKDVLENGDSHGKNVISRLVDIWEQRKVFGS
Sbjct: 61  LYLANDILQNSKRKGNEFVTEFWKVLPSALKDVLENGDSHGKNVISRLVDIWEQRKVFGS 120

Query: 121 RTRSLKDVILGEEAPPPLEFSKK----THSISQNCQKRFTKLSIGSAAEKIVSAFHLVLS 180
           RTRSLKDVILGEEAPPPLEFSKK       + ++ +   TKLSIGSAAEKIVSAFHLVLS
Sbjct: 121 RTRSLKDVILGEEAPPPLEFSKKRTRSVRIVKRDSRSIRTKLSIGSAAEKIVSAFHLVLS 180

Query: 181 EYSNEETEMTNCISAVQRVRKMENDVDFACSMAKNPQRKKLAKELEEEESVLKQCIEKLQ 240
           EYSNEETEMTNCISAVQRVRKMENDVDFACSMAKNPQRKKLAKELEEEESVLKQCIEKLQ
Sbjct: 181 EYSNEETEMTNCISAVQRVRKMENDVDFACSMAKNPQRKKLAKELEEEESVLKQCIEKLQ 240

Query: 241 SVEASRLALISQLKEALHVQESELENIRTQMQVAQAQAEEAKNMQNRLNDEGYLSKTSIT 300
           SVEASRLALISQLKEALHVQESELENIRTQMQVAQAQAEEAKNMQNRLNDEGYLSKTSIT
Sbjct: 241 SVEASRLALISQLKEALHVQESELENIRTQMQVAQAQAEEAKNMQNRLNDEGYLSKTSIT 300

Query: 301 DSNAKMGQTPKKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAKHTGLTKNNNGLN 360
           DSNAKMGQTPKKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAKHTGLTKNNNGLN
Sbjct: 301 DSNAKMGQTPKKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAKHTGLTKNNNGLN 360

Query: 361 AFASKPMRSSANSITKPEASAVGSDPNVFMSMQPLPAPANHSYQSVMVPQPTMQSQASNS 420
           AFASKPMRSSANSITKPEASAVGSDPNVFMSMQPLPAPANHSYQSVMVPQPTMQSQASNS
Sbjct: 361 AFASKPMRSSANSITKPEASAVGSDPNVFMSMQPLPAPANHSYQSVMVPQPTMQSQASNS 420

Query: 421 QTQYQMLPSAPSQQYLQLSNGVLTPYGYGSLPNSTPVPPPPMPHMVSPVVPLTQQMLQQT 480
           QTQYQMLPSAPSQQYLQLSNGVLTPYGYGSLPNSTPVPPPPMPHMVSPVVPLTQQMLQQT
Sbjct: 421 QTQYQMLPSAPSQQYLQLSNGVLTPYGYGSLPNSTPVPPPPMPHMVSPVVPLTQQMLQQT 480

Query: 481 IPLAQQPSPMIQTQPVPFTQQPLAPSFRPLQPPGMVYYGHPPPSQ 522
           IPLAQQPSPMIQTQPVPFTQQPLAPSFRPLQPPGMVYYGHPPPSQ
Sbjct: 481 IPLAQQPSPMIQTQPVPFTQQPLAPSFRPLQPPGMVYYGHPPPSQ 525

[Close]

BLAST of IVF0017203 vs. ExPASy TrEMBL
Match: A0A0A0KWH8 (CID domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G031050 PE=4 SV=1)

HSP 1 Score: 933.3 bits (2411), Expect = 4.3e-268
Identity = 500/525 (95.24%), Postives = 507/525 (96.57%), Query Frame = 0


Query: 1   MNSVFSEQILADKLSKLNSTQQCIETLSHWCIFHRGKAELVVATWDKQFHNSEMVQKVPL 60
           MNSVFSEQILADKLSKLNSTQQCIETLSHWCIFHRGKAELVVATWDKQFHNSEMVQKVPL
Sbjct: 1   MNSVFSEQILADKLSKLNSTQQCIETLSHWCIFHRGKAELVVATWDKQFHNSEMVQKVPL 60

Query: 61  LYLANDILQNSKRKGNEFVTEFWKVLPSALKDVLENGDSHGKNVISRLVDIWEQRKVFGS 120
           LYLANDILQNSKRKGNEFVTEFWKVLPSALKDVLENGDSHGKNVISRLVDIWEQRKVFGS
Sbjct: 61  LYLANDILQNSKRKGNEFVTEFWKVLPSALKDVLENGDSHGKNVISRLVDIWEQRKVFGS 120

Query: 121 RTRSLKDVILGEEAPPPLEFSKK----THSISQNCQKRFTKLSIGSAAEKIVSAFHLVLS 180
           RTRSLKDVILGEEAPPPLEFSKK       + ++ +   TKLSIGSAAEKIVSAFHLVLS
Sbjct: 121 RTRSLKDVILGEEAPPPLEFSKKRTRSVRIVKRDSRSIRTKLSIGSAAEKIVSAFHLVLS 180

Query: 181 EYSNEETEMTNCISAVQRVRKMENDVDFACSMAKNPQRKKLAKELEEEESVLKQCIEKLQ 240
           EYSNEETEMTNC SAVQRVRKMENDVDFACSMAKNPQRKKLAKELEEEESVLKQCIEKLQ
Sbjct: 181 EYSNEETEMTNCNSAVQRVRKMENDVDFACSMAKNPQRKKLAKELEEEESVLKQCIEKLQ 240

Query: 241 SVEASRLALISQLKEALHVQESELENIRTQMQVAQAQAEEAKNMQNRLNDEGYLSKTSIT 300
           SVEASRLALI+QLKEALHVQESELENIRTQMQVAQAQAEEAKNMQNRLNDEGY+SKTSI 
Sbjct: 241 SVEASRLALITQLKEALHVQESELENIRTQMQVAQAQAEEAKNMQNRLNDEGYVSKTSII 300

Query: 301 DSNAKMGQTPKKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAKHTGLTKNNNGLN 360
           DSNAK GQTPKKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAKHT LTK NNGLN
Sbjct: 301 DSNAKAGQTPKKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAKHTNLTKTNNGLN 360

Query: 361 AFASKPMRSSANSITKPEASAVGSDPNVFMSMQPLPAPANHSYQSVMVPQPTMQSQASNS 420
           AFASKPMRSSANSITKPEASAVGSDPNVFMSMQPL APANHSYQSVMVPQPTMQSQASNS
Sbjct: 361 AFASKPMRSSANSITKPEASAVGSDPNVFMSMQPLAAPANHSYQSVMVPQPTMQSQASNS 420

Query: 421 QTQYQMLPSAPSQQYLQLSNGVLTPYGYGSLPNSTPVPPPPMPHMVSPVVPLTQQMLQQT 480
           QTQYQMLPSAPSQQYLQLSNGVLTPYGYGSLP+STPVPPPPMPHMVSPVVPLTQQMLQQT
Sbjct: 421 QTQYQMLPSAPSQQYLQLSNGVLTPYGYGSLPSSTPVPPPPMPHMVSPVVPLTQQMLQQT 480

Query: 481 IPLAQQPSPMIQTQPVPFTQQPLAPSFRPLQPPGMVYYGHPPPSQ 522
           IPLAQQPSPMIQTQPVPFTQQPLAPSFRPLQPPGMVYYGHPPPSQ
Sbjct: 481 IPLAQQPSPMIQTQPVPFTQQPLAPSFRPLQPPGMVYYGHPPPSQ 525

[Close]

BLAST of IVF0017203 vs. ExPASy TrEMBL
Match: A0A6J1C8E3 (regulation of nuclear pre-mRNA domain-containing protein 1B-like OS=Momordica charantia OX=3673 GN=LOC111008373 PE=4 SV=1)

HSP 1 Score: 871.3 bits (2250), Expect = 2.0e-249
Identity = 475/528 (89.96%), Postives = 490/528 (92.80%), Query Frame = 0


Query: 1   MNSVFSEQILADKLSKLNSTQQCIETLSHWCIFHRGKAELVVATWDKQFHNSEMVQKVPL 60
           MNSVFSEQIL DKLSKLNSTQQCIETLSHWCIFHRGKAELVVATWDKQFHNSEMVQKVPL
Sbjct: 1   MNSVFSEQILGDKLSKLNSTQQCIETLSHWCIFHRGKAELVVATWDKQFHNSEMVQKVPL 60

Query: 61  LYLANDILQNSKRKGNEFVTEFWKVLPSALKDVLENGDSHGKNVISRLVDIWEQRKVFGS 120
           LYLANDILQNSKRKGNEFVTEFWKVLP+ALKDVLENGDSHGKNVISRLVDIWEQRKVFGS
Sbjct: 61  LYLANDILQNSKRKGNEFVTEFWKVLPAALKDVLENGDSHGKNVISRLVDIWEQRKVFGS 120

Query: 121 RTRSLKDVILGEEAPPPLEFSKK----THSISQNCQKRFTKLSIGSAAEKIVSAFHLVLS 180
           RTRSLKDVILGEEAPPPLEFSKK       + ++ +   TKLSIGSAAEKIVSAFHLVLS
Sbjct: 121 RTRSLKDVILGEEAPPPLEFSKKRTRSVRIVKRDSRSIRTKLSIGSAAEKIVSAFHLVLS 180

Query: 181 EYSNEETEMTNCISAVQRVRKMENDVDFACSMAKNPQRKKLAKELEEEESVLKQCIEKLQ 240
           EYSNEETEMT C SAVQRVRKMENDVDFACSMAKNPQRKKLAKELEEEES+LKQCIEKLQ
Sbjct: 181 EYSNEETEMTKCTSAVQRVRKMENDVDFACSMAKNPQRKKLAKELEEEESILKQCIEKLQ 240

Query: 241 SVEASRLALISQLKEALHVQESELENIRTQMQVAQAQAEEAKNMQNRLNDEGYLSKTS-- 300
           SVEASR+AL+SQLKEALHVQESELENIRTQMQVAQAQAEEAKNMQNRLNDEGYLSK+S  
Sbjct: 241 SVEASRMALMSQLKEALHVQESELENIRTQMQVAQAQAEEAKNMQNRLNDEGYLSKSSTM 300

Query: 301 ITDSNAKMGQTPKKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAKHTGLTKNNNG 360
             DSNAK GQ  KKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAK+TGLTK NNG
Sbjct: 301 TIDSNAKAGQ--KKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAKNTGLTKTNNG 360

Query: 361 LN-AFASKPMRSSANSITKPEASAVGSDPNVFMSMQPLPAPANHSYQSVMVPQPTMQSQA 420
           LN AF  KP  +SANS TKP+ S VGSDPNVFMSMQPLPAPANHSYQSV+VPQPTMQS A
Sbjct: 361 LNTAFTPKPTSTSANSNTKPKTS-VGSDPNVFMSMQPLPAPANHSYQSVIVPQPTMQSHA 420

Query: 421 SNSQTQYQMLPSAPSQQYLQLSNGVLTPYGYGSLPNSTPVPPPPMPHMVSPVVPLTQQML 480
            NSQTQYQMLP+APSQQYLQLSNGVL PYGYGSLP+STP PPPPMPHMVSPVVPLTQQML
Sbjct: 421 PNSQTQYQMLPNAPSQQYLQLSNGVLNPYGYGSLPSSTPAPPPPMPHMVSPVVPLTQQML 480

Query: 481 QQTIPLAQQPSPMIQTQPVPFTQQPLAPSFRPLQPPGMVYYGHPPPSQ 522
           QQ IPLAQQPSPMI T PVPFTQQPLAPSFRPLQPPGMVYYGHPPPSQ
Sbjct: 481 QQPIPLAQQPSPMIHTLPVPFTQQPLAPSFRPLQPPGMVYYGHPPPSQ 525

[Close]

BLAST of IVF0017203 vs. ExPASy TrEMBL
Match: A0A6J1EM93 (regulation of nuclear pre-mRNA domain-containing protein 1A-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111435888 PE=4 SV=1)

HSP 1 Score: 855.9 bits (2210), Expect = 8.8e-245
Identity = 460/525 (87.62%), Postives = 486/525 (92.57%), Query Frame = 0


Query: 1   MNSVFSEQILADKLSKLNSTQQCIETLSHWCIFHRGKAELVVATWDKQFHNSEMVQKVPL 60
           MNSVFSEQILADKLSKLNSTQQCIETLSHWCIFHR KAELVVATWDKQFHNSEM QKVPL
Sbjct: 1   MNSVFSEQILADKLSKLNSTQQCIETLSHWCIFHRCKAELVVATWDKQFHNSEMAQKVPL 60

Query: 61  LYLANDILQNSKRKGNEFVTEFWKVLPSALKDVLENGDSHGKNVISRLVDIWEQRKVFGS 120
           LYLANDILQNSKRKGNEFV+EFWKVLPSALKDVL++ D+HGKNVISRLVDIWEQRKVFGS
Sbjct: 61  LYLANDILQNSKRKGNEFVSEFWKVLPSALKDVLDHADNHGKNVISRLVDIWEQRKVFGS 120

Query: 121 RTRSLKDVILGEEAPPPLEFSKK----THSISQNCQKRFTKLSIGSAAEKIVSAFHLVLS 180
           RTRSLKDVIL EEAPPPLEFSKK       + ++ +   TKLSIGSAAEKIVSAF+LVLS
Sbjct: 121 RTRSLKDVILREEAPPPLEFSKKRTRSVRIVKRDSRSIRTKLSIGSAAEKIVSAFYLVLS 180

Query: 181 EYSNEETEMTNCISAVQRVRKMENDVDFACSMAKNPQRKKLAKELEEEESVLKQCIEKLQ 240
           E SNEETEMTNC SAVQRVRKMENDVDFACS+AKNPQRKKLAKELEEEES+LKQCI+KLQ
Sbjct: 181 ECSNEETEMTNCNSAVQRVRKMENDVDFACSVAKNPQRKKLAKELEEEESILKQCIQKLQ 240

Query: 241 SVEASRLALISQLKEALHVQESELENIRTQMQVAQAQAEEAKNMQNRLNDEGYLSKTSIT 300
           SVE +R+ALIS LKEALHVQESELENIRTQMQVAQAQAEEAKNMQNRLNDEGYLSK S  
Sbjct: 241 SVEGNRMALISHLKEALHVQESELENIRTQMQVAQAQAEEAKNMQNRLNDEGYLSKRSTI 300

Query: 301 DSNAKMGQTPKKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAKHTGLTKNNNGLN 360
           DSNAK G++P KSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAK+T LTK NNG N
Sbjct: 301 DSNAKAGRSPNKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAKNTVLTKTNNGSN 360

Query: 361 AFASKPMRSSANSITKPEASAVGSDPNVFMSMQPLPAPANHSYQSVMVPQPTMQSQASNS 420
           AF   P+R SANSITKPEASA+ SDPNVFMSMQPLPAPANHSYQSVMVPQP MQSQA NS
Sbjct: 361 AFTPNPVR-SANSITKPEASAIVSDPNVFMSMQPLPAPANHSYQSVMVPQPAMQSQAPNS 420

Query: 421 QTQYQMLPSAPSQQYLQLSNGVLTPYGYGSLPNSTPVPPPPMPHMVSPVVPLTQQMLQQT 480
           QT YQ+LP+APSQQY+QLSNGVLTPYGYGSLP+STPVPPPP+P MVSP+VPLTQQMLQQ 
Sbjct: 421 QTPYQLLPNAPSQQYMQLSNGVLTPYGYGSLPSSTPVPPPPIPRMVSPMVPLTQQMLQQP 480

Query: 481 IPLAQQPSPMIQTQPVPFTQQPLAPSFRPLQPPGMVYYGHPPPSQ 522
           +PLAQQPSPMIQTQPVPF QQPLAPSFRPLQPPGMVYYGHPPPSQ
Sbjct: 481 MPLAQQPSPMIQTQPVPFAQQPLAPSFRPLQPPGMVYYGHPPPSQ 524

[Close]

BLAST of IVF0017203 vs. NCBI nr
Match: KAA0044733.1 (regulation of nuclear pre-mRNA domain-containing protein 1B [Cucumis melo var. makuwa])

HSP 1 Score: 947 bits (2448), Expect = 0.0
Identity = 511/525 (97.33%), Postives = 515/525 (98.10%), Query Frame = 0


Query: 1   MNSVFSEQILADKLSKLNSTQQCIETLSHWCIFHRGKAELVVATWDKQFHNSEMVQKVPL 60
           MNSVFSEQILADKLSKLNSTQQCIETLSHWCIFHRGKAELVVATWDKQFHNSEMVQKVPL
Sbjct: 358 MNSVFSEQILADKLSKLNSTQQCIETLSHWCIFHRGKAELVVATWDKQFHNSEMVQKVPL 417

Query: 61  LYLANDILQNSKRKGNEFVTEFWKVLPSALKDVLENGDSHGKNVISRLVDIWEQRKVFGS 120
           LYLANDILQNSKRKGNEFVTEFWKVLPSALKDVLENGDSHGKNVISRLVDIWEQRKVFGS
Sbjct: 418 LYLANDILQNSKRKGNEFVTEFWKVLPSALKDVLENGDSHGKNVISRLVDIWEQRKVFGS 477

Query: 121 RTRSLKDVILGEEAPPPLEFSKK-THSI---SQNCQKRFTKLSIGSAAEKIVSAFHLVLS 180
           RTRSLKDVILGEEAPPPLEFSKK T S+    ++ +   TKLSIGSAAEKIVSAFHLVLS
Sbjct: 478 RTRSLKDVILGEEAPPPLEFSKKRTRSVRIVKRDSRSIRTKLSIGSAAEKIVSAFHLVLS 537

Query: 181 EYSNEETEMTNCISAVQRVRKMENDVDFACSMAKNPQRKKLAKELEEEESVLKQCIEKLQ 240
           EYSNEETEMTNCISAVQRVRKMENDVDFACSMAKNPQRKKLAKELEEEESVLKQCIEKLQ
Sbjct: 538 EYSNEETEMTNCISAVQRVRKMENDVDFACSMAKNPQRKKLAKELEEEESVLKQCIEKLQ 597

Query: 241 SVEASRLALISQLKEALHVQESELENIRTQMQVAQAQAEEAKNMQNRLNDEGYLSKTSIT 300
           SVEASRLALISQLKEALHVQESELENIRTQMQVAQAQAEEAKNMQNRLNDEGYLSKTSIT
Sbjct: 598 SVEASRLALISQLKEALHVQESELENIRTQMQVAQAQAEEAKNMQNRLNDEGYLSKTSIT 657

Query: 301 DSNAKMGQTPKKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAKHTGLTKNNNGLN 360
           DSNAKMGQTPKKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAKHTGLTKNNNGLN
Sbjct: 658 DSNAKMGQTPKKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAKHTGLTKNNNGLN 717

Query: 361 AFASKPMRSSANSITKPEASAVGSDPNVFMSMQPLPAPANHSYQSVMVPQPTMQSQASNS 420
           AFASKPMRSSANSITKPEASAVGSDPNVFMSMQPLPAPANHSYQSVMVPQPTMQSQASNS
Sbjct: 718 AFASKPMRSSANSITKPEASAVGSDPNVFMSMQPLPAPANHSYQSVMVPQPTMQSQASNS 777

Query: 421 QTQYQMLPSAPSQQYLQLSNGVLTPYGYGSLPNSTPVPPPPMPHMVSPVVPLTQQMLQQT 480
           QTQYQMLPSAPSQQYLQLSNGVLTPYGYGSLPNSTPVPPPPMPHMVSPVVPLTQQMLQQT
Sbjct: 778 QTQYQMLPSAPSQQYLQLSNGVLTPYGYGSLPNSTPVPPPPMPHMVSPVVPLTQQMLQQT 837

Query: 481 IPLAQQPSPMIQTQPVPFTQQPLAPSFRPLQPPGMVYYGHPPPSQ 521
           IPLAQQPSPMIQTQPVPFTQQPLAPSFRPLQPPGMVYYGHPPPSQ
Sbjct: 838 IPLAQQPSPMIQTQPVPFTQQPLAPSFRPLQPPGMVYYGHPPPSQ 882

[Close]

BLAST of IVF0017203 vs. NCBI nr
Match: XP_008453770.1 (PREDICTED: regulation of nuclear pre-mRNA domain-containing protein 1B [Cucumis melo])

HSP 1 Score: 947 bits (2448), Expect = 0.0
Identity = 511/525 (97.33%), Postives = 515/525 (98.10%), Query Frame = 0


Query: 1   MNSVFSEQILADKLSKLNSTQQCIETLSHWCIFHRGKAELVVATWDKQFHNSEMVQKVPL 60
           MNSVFSEQILADKLSKLNSTQQCIETLSHWCIFHRGKAELVVATWDKQFHNSEMVQKVPL
Sbjct: 1   MNSVFSEQILADKLSKLNSTQQCIETLSHWCIFHRGKAELVVATWDKQFHNSEMVQKVPL 60

Query: 61  LYLANDILQNSKRKGNEFVTEFWKVLPSALKDVLENGDSHGKNVISRLVDIWEQRKVFGS 120
           LYLANDILQNSKRKGNEFVTEFWKVLPSALKDVLENGDSHGKNVISRLVDIWEQRKVFGS
Sbjct: 61  LYLANDILQNSKRKGNEFVTEFWKVLPSALKDVLENGDSHGKNVISRLVDIWEQRKVFGS 120

Query: 121 RTRSLKDVILGEEAPPPLEFSKK-THSI---SQNCQKRFTKLSIGSAAEKIVSAFHLVLS 180
           RTRSLKDVILGEEAPPPLEFSKK T S+    ++ +   TKLSIGSAAEKIVSAFHLVLS
Sbjct: 121 RTRSLKDVILGEEAPPPLEFSKKRTRSVRIVKRDSRSIRTKLSIGSAAEKIVSAFHLVLS 180

Query: 181 EYSNEETEMTNCISAVQRVRKMENDVDFACSMAKNPQRKKLAKELEEEESVLKQCIEKLQ 240
           EYSNEETEMTNCISAVQRVRKMENDVDFACSMAKNPQRKKLAKELEEEESVLKQCIEKLQ
Sbjct: 181 EYSNEETEMTNCISAVQRVRKMENDVDFACSMAKNPQRKKLAKELEEEESVLKQCIEKLQ 240

Query: 241 SVEASRLALISQLKEALHVQESELENIRTQMQVAQAQAEEAKNMQNRLNDEGYLSKTSIT 300
           SVEASRLALISQLKEALHVQESELENIRTQMQVAQAQAEEAKNMQNRLNDEGYLSKTSIT
Sbjct: 241 SVEASRLALISQLKEALHVQESELENIRTQMQVAQAQAEEAKNMQNRLNDEGYLSKTSIT 300

Query: 301 DSNAKMGQTPKKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAKHTGLTKNNNGLN 360
           DSNAKMGQTPKKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAKHTGLTKNNNGLN
Sbjct: 301 DSNAKMGQTPKKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAKHTGLTKNNNGLN 360

Query: 361 AFASKPMRSSANSITKPEASAVGSDPNVFMSMQPLPAPANHSYQSVMVPQPTMQSQASNS 420
           AFASKPMRSSANSITKPEASAVGSDPNVFMSMQPLPAPANHSYQSVMVPQPTMQSQASNS
Sbjct: 361 AFASKPMRSSANSITKPEASAVGSDPNVFMSMQPLPAPANHSYQSVMVPQPTMQSQASNS 420

Query: 421 QTQYQMLPSAPSQQYLQLSNGVLTPYGYGSLPNSTPVPPPPMPHMVSPVVPLTQQMLQQT 480
           QTQYQMLPSAPSQQYLQLSNGVLTPYGYGSLPNSTPVPPPPMPHMVSPVVPLTQQMLQQT
Sbjct: 421 QTQYQMLPSAPSQQYLQLSNGVLTPYGYGSLPNSTPVPPPPMPHMVSPVVPLTQQMLQQT 480

Query: 481 IPLAQQPSPMIQTQPVPFTQQPLAPSFRPLQPPGMVYYGHPPPSQ 521
           IPLAQQPSPMIQTQPVPFTQQPLAPSFRPLQPPGMVYYGHPPPSQ
Sbjct: 481 IPLAQQPSPMIQTQPVPFTQQPLAPSFRPLQPPGMVYYGHPPPSQ 525

[Close]

BLAST of IVF0017203 vs. NCBI nr
Match: KAE8637566.1 (hypothetical protein CSA_017843 [Cucumis sativus])

HSP 1 Score: 928 bits (2398), Expect = 0.0
Identity = 502/525 (95.62%), Postives = 509/525 (96.95%), Query Frame = 0


Query: 1   MNSVFSEQILADKLSKLNSTQQCIETLSHWCIFHRGKAELVVATWDKQFHNSEMVQKVPL 60
           MNSVFSEQILADKLSKLNSTQQCIETLSHWCIFHRGKAELVVATWDKQFHNSEMVQKVPL
Sbjct: 371 MNSVFSEQILADKLSKLNSTQQCIETLSHWCIFHRGKAELVVATWDKQFHNSEMVQKVPL 430

Query: 61  LYLANDILQNSKRKGNEFVTEFWKVLPSALKDVLENGDSHGKNVISRLVDIWEQRKVFGS 120
           LYLANDILQNSKRKGNEFVTEFWKVLPSALKDVLENGDSHGKNVISRLVDIWEQRKVFGS
Sbjct: 431 LYLANDILQNSKRKGNEFVTEFWKVLPSALKDVLENGDSHGKNVISRLVDIWEQRKVFGS 490

Query: 121 RTRSLKDVILGEEAPPPLEFSKK-THSI---SQNCQKRFTKLSIGSAAEKIVSAFHLVLS 180
           RTRSLKDVILGEEAPPPLEFSKK T S+    ++ +   TKLSIGSAAEKIVSAFHLVLS
Sbjct: 491 RTRSLKDVILGEEAPPPLEFSKKRTRSVRIVKRDSRSIRTKLSIGSAAEKIVSAFHLVLS 550

Query: 181 EYSNEETEMTNCISAVQRVRKMENDVDFACSMAKNPQRKKLAKELEEEESVLKQCIEKLQ 240
           EYSNEETEMTNC SAVQRVRKMENDVDFACSMAKNPQRKKLAKELEEEESVLKQCIEKLQ
Sbjct: 551 EYSNEETEMTNCNSAVQRVRKMENDVDFACSMAKNPQRKKLAKELEEEESVLKQCIEKLQ 610

Query: 241 SVEASRLALISQLKEALHVQESELENIRTQMQVAQAQAEEAKNMQNRLNDEGYLSKTSIT 300
           SVEASRLALI+QLKEALHVQESELENIRTQMQVAQAQAEEAKNMQNRLNDEGY+SKTSI 
Sbjct: 611 SVEASRLALITQLKEALHVQESELENIRTQMQVAQAQAEEAKNMQNRLNDEGYVSKTSII 670

Query: 301 DSNAKMGQTPKKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAKHTGLTKNNNGLN 360
           DSNAK GQTPKKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAKHT LTK NNGLN
Sbjct: 671 DSNAKAGQTPKKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAKHTNLTKTNNGLN 730

Query: 361 AFASKPMRSSANSITKPEASAVGSDPNVFMSMQPLPAPANHSYQSVMVPQPTMQSQASNS 420
           AFASKPMRSSANSITKPEASAVGSDPNVFMSMQPL APANHSYQSVMVPQPTMQSQASNS
Sbjct: 731 AFASKPMRSSANSITKPEASAVGSDPNVFMSMQPLAAPANHSYQSVMVPQPTMQSQASNS 790

Query: 421 QTQYQMLPSAPSQQYLQLSNGVLTPYGYGSLPNSTPVPPPPMPHMVSPVVPLTQQMLQQT 480
           QTQYQMLPSAPSQQYLQLSNGVLTPYGYGSLP+STPVPPPPMPHMVSPVVPLTQQMLQQT
Sbjct: 791 QTQYQMLPSAPSQQYLQLSNGVLTPYGYGSLPSSTPVPPPPMPHMVSPVVPLTQQMLQQT 850

Query: 481 IPLAQQPSPMIQTQPVPFTQQPLAPSFRPLQPPGMVYYGHPPPSQ 521
           IPLAQQPSPMIQTQPVPFTQQPLAPSFRPLQPPGMVYYGHPPPSQ
Sbjct: 851 IPLAQQPSPMIQTQPVPFTQQPLAPSFRPLQPPGMVYYGHPPPSQ 895

[Close]

BLAST of IVF0017203 vs. NCBI nr
Match: XP_031745821.1 (regulation of nuclear pre-mRNA domain-containing protein 1B-like [Cucumis sativus])

HSP 1 Score: 928 bits (2398), Expect = 0.0
Identity = 502/525 (95.62%), Postives = 509/525 (96.95%), Query Frame = 0


Query: 1   MNSVFSEQILADKLSKLNSTQQCIETLSHWCIFHRGKAELVVATWDKQFHNSEMVQKVPL 60
           MNSVFSEQILADKLSKLNSTQQCIETLSHWCIFHRGKAELVVATWDKQFHNSEMVQKVPL
Sbjct: 1   MNSVFSEQILADKLSKLNSTQQCIETLSHWCIFHRGKAELVVATWDKQFHNSEMVQKVPL 60

Query: 61  LYLANDILQNSKRKGNEFVTEFWKVLPSALKDVLENGDSHGKNVISRLVDIWEQRKVFGS 120
           LYLANDILQNSKRKGNEFVTEFWKVLPSALKDVLENGDSHGKNVISRLVDIWEQRKVFGS
Sbjct: 61  LYLANDILQNSKRKGNEFVTEFWKVLPSALKDVLENGDSHGKNVISRLVDIWEQRKVFGS 120

Query: 121 RTRSLKDVILGEEAPPPLEFSKK-THSI---SQNCQKRFTKLSIGSAAEKIVSAFHLVLS 180
           RTRSLKDVILGEEAPPPLEFSKK T S+    ++ +   TKLSIGSAAEKIVSAFHLVLS
Sbjct: 121 RTRSLKDVILGEEAPPPLEFSKKRTRSVRIVKRDSRSIRTKLSIGSAAEKIVSAFHLVLS 180

Query: 181 EYSNEETEMTNCISAVQRVRKMENDVDFACSMAKNPQRKKLAKELEEEESVLKQCIEKLQ 240
           EYSNEETEMTNC SAVQRVRKMENDVDFACSMAKNPQRKKLAKELEEEESVLKQCIEKLQ
Sbjct: 181 EYSNEETEMTNCNSAVQRVRKMENDVDFACSMAKNPQRKKLAKELEEEESVLKQCIEKLQ 240

Query: 241 SVEASRLALISQLKEALHVQESELENIRTQMQVAQAQAEEAKNMQNRLNDEGYLSKTSIT 300
           SVEASRLALI+QLKEALHVQESELENIRTQMQVAQAQAEEAKNMQNRLNDEGY+SKTSI 
Sbjct: 241 SVEASRLALITQLKEALHVQESELENIRTQMQVAQAQAEEAKNMQNRLNDEGYVSKTSII 300

Query: 301 DSNAKMGQTPKKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAKHTGLTKNNNGLN 360
           DSNAK GQTPKKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAKHT LTK NNGLN
Sbjct: 301 DSNAKAGQTPKKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAKHTNLTKTNNGLN 360

Query: 361 AFASKPMRSSANSITKPEASAVGSDPNVFMSMQPLPAPANHSYQSVMVPQPTMQSQASNS 420
           AFASKPMRSSANSITKPEASAVGSDPNVFMSMQPL APANHSYQSVMVPQPTMQSQASNS
Sbjct: 361 AFASKPMRSSANSITKPEASAVGSDPNVFMSMQPLAAPANHSYQSVMVPQPTMQSQASNS 420

Query: 421 QTQYQMLPSAPSQQYLQLSNGVLTPYGYGSLPNSTPVPPPPMPHMVSPVVPLTQQMLQQT 480
           QTQYQMLPSAPSQQYLQLSNGVLTPYGYGSLP+STPVPPPPMPHMVSPVVPLTQQMLQQT
Sbjct: 421 QTQYQMLPSAPSQQYLQLSNGVLTPYGYGSLPSSTPVPPPPMPHMVSPVVPLTQQMLQQT 480

Query: 481 IPLAQQPSPMIQTQPVPFTQQPLAPSFRPLQPPGMVYYGHPPPSQ 521
           IPLAQQPSPMIQTQPVPFTQQPLAPSFRPLQPPGMVYYGHPPPSQ
Sbjct: 481 IPLAQQPSPMIQTQPVPFTQQPLAPSFRPLQPPGMVYYGHPPPSQ 525

[Close]

BLAST of IVF0017203 vs. NCBI nr
Match: XP_031739595.1 (LOW QUALITY PROTEIN: regulation of nuclear pre-mRNA domain-containing protein 1B [Cucumis sativus])

HSP 1 Score: 919 bits (2375), Expect = 0.0
Identity = 500/526 (95.06%), Postives = 507/526 (96.39%), Query Frame = 0


Query: 1   MNSVFSEQILADKLSKLNSTQQCIETLSHWCIFHRGKAELVVATWDKQFHNSEMVQKVPL 60
           MNSVFSEQILADKLSKLNSTQQCIETLSHWCIFHRGKAELVVATWDKQFHNSEMVQKVPL
Sbjct: 1   MNSVFSEQILADKLSKLNSTQQCIETLSHWCIFHRGKAELVVATWDKQFHNSEMVQKVPL 60

Query: 61  LYLANDILQNSKRKGNEFVTEFWKVLPSALKDVLENGDSHGKNVISRLVDIWEQRKVFGS 120
           LYLANDILQNSKRKGNEFVTEFWKVLPSALKDVLENGDSHGKNVISRLVDIWEQRKVFGS
Sbjct: 61  LYLANDILQNSKRKGNEFVTEFWKVLPSALKDVLENGDSHGKNVISRLVDIWEQRKVFGS 120

Query: 121 RTRSLKDVILGEEAPPPLEFSKK-THSI---SQNCQKRFTKLSIGSAAEKIVSAFHLVLS 180
           RTRSLKDVILGEEAPPPLEFSKK T S+    ++ +   TKLSIGSAAEKIVSAFHLVLS
Sbjct: 121 RTRSLKDVILGEEAPPPLEFSKKRTRSVRIVKRDSRSIRTKLSIGSAAEKIVSAFHLVLS 180

Query: 181 EYSNEETEMTNCISAVQRVRKMENDVDFACSMAKNPQRKKLAKELEEEESVLKQCIEKLQ 240
           EYSNEETEMTNC SAVQRVRKMENDVDFACSMAKNPQRKKLAKELEEEESVLKQCIEKLQ
Sbjct: 181 EYSNEETEMTNCNSAVQRVRKMENDVDFACSMAKNPQRKKLAKELEEEESVLKQCIEKLQ 240

Query: 241 SVEASRLALISQLKEALHVQESELENIRTQMQVAQAQAEEAKNMQNRLNDEGYLSKTSIT 300
           SVEASRLALI+QLKEALHVQESELENIRTQMQVAQAQAEEAKNMQNRLNDEGY+SKTSI 
Sbjct: 241 SVEASRLALITQLKEALHVQESELENIRTQMQVAQAQAEEAKNMQNRLNDEGYVSKTSII 300

Query: 301 DSNAKMGQTPKKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAKHTGLTKNNNGLN 360
           DSNAK GQTPKKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAKHT LTK NNGLN
Sbjct: 301 DSNAKAGQTPKKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAKHTNLTKTNNGLN 360

Query: 361 AFASKPMRSSANSITKPEASAVGSDPNVFMSMQPLPAPANHSYQSVMVPQPTMQSQASNS 420
           AFASKPMRSSANSITKPEASAVGSDPNVFMSMQPL APANHSYQSVMVPQPTMQSQASNS
Sbjct: 361 AFASKPMRSSANSITKPEASAVGSDPNVFMSMQPLAAPANHSYQSVMVPQPTMQSQASNS 420

Query: 421 QTQYQMLPSAPSQQYLQLSNGVLTPYGYGSLPNSTPVPPPPMPHMVSPVVPLTQQMLQQT 480
           QTQYQMLPSAPSQQYLQLSNGVLTPYGYGSLP+STPVPPPPMPHMVSPVVPLTQQMLQQT
Sbjct: 421 QTQYQMLPSAPSQQYLQLSNGVLTPYGYGSLPSSTPVPPPPMPHMVSPVVPLTQQMLQQT 480

Query: 481 IPLAQQPSPMIQT-QPVPFTQQPLAPSFRPLQPPGMVYYGHPPPSQ 521
           IPLAQQPSPMI   QPVPFTQQPLAPSFRPLQPPGMVYYGHPPPSQ
Sbjct: 481 IPLAQQPSPMITNXQPVPFTQQPLAPSFRPLQPPGMVYYGHPPPSQ 526

[Close]

BLAST of IVF0017203 vs. TAIR 10
Match: AT5G10060.1 (ENTH/VHS family protein )

HSP 1 Score: 424.5 bits (1090), Expect = 1.3e-118
Identity = 269/532 (50.56%), Postives = 350/532 (65.79%), Query Frame = 0


Query: 1   MNSVFSEQILADKLSKLNSTQQCIETLSHWCIFHRGKAELVVATWDKQFHNSEMVQKVPL 60
           M+SVFS+QIL DKL+KLNS+QQ IETLSHWCIF+R KAEL+V TW+KQFH++EM QKVPL
Sbjct: 1   MSSVFSDQILIDKLAKLNSSQQSIETLSHWCIFNRSKAELIVTTWEKQFHSTEMDQKVPL 60

Query: 61  LYLANDILQNSKRKGNEFVTEFWKVLPSALKDVLENGDSHGKNVISRLVDIWEQRKVFGS 120
           LYLANDILQNSKR+GNEFV EFW VLP ALKD++  GD +GK+ ++R++ IWE+R+VFGS
Sbjct: 61  LYLANDILQNSKRQGNEFVQEFWNVLPKALKDIVSQGDDNGKSAVARVIKIWEERRVFGS 120

Query: 121 RTRSLKDVILGEEAPPPLEFSKK----THSISQNCQKRFTKL-SIGSAAEKIVSAFHLVL 180
           R++SLKDV+LGE+ P PL+ SKK    + S  +  +   TKL S G  AEKI SA+HLV+
Sbjct: 121 RSKSLKDVMLGEDVPLPLDISKKRPRGSKSSKRESKSSRTKLASSGGVAEKIASAYHLVV 180

Query: 181 SEYSNEETEMTNCISAVQRVRKMENDVDFACSMAK-NPQRKKLAKELEEEESVLKQCIEK 240
           +E SNEE EM  C SAV+R+RKME DV+ ACS AK NP+RK LAKELEEEE +L+QCIEK
Sbjct: 181 AENSNEEAEMNKCKSAVKRIRKMEKDVEEACSTAKDNPKRKSLAKELEEEEYLLRQCIEK 240

Query: 241 LQSVEASRLALISQLKEALHVQESELENIRTQMQVAQAQAEEAKNMQNRLNDEGYLSK-- 300
           L+SV+ SR +L++QLK+AL  QESEL+N++ Q+QVA+ Q EEA+NMQ RLNDE Y SK  
Sbjct: 241 LKSVQGSRSSLVNQLKDALREQESELDNLKAQIQVAKEQTEEAQNMQKRLNDEDYTSKQT 300

Query: 301 ---TSITDS--NAKMGQTPKKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAKHTG 360
              T+IT++  N K GQ  K + A+IAA     L AS+SS MIM SVLS+FAAE  K +G
Sbjct: 301 TAATTITETNDNTKSGQASKMTPASIAA----MLTASTSSHMIMQSVLSSFAAEATKTSG 360

Query: 361 LTKNNNGLNAFASKPMRSSANSITKPEASAVGSDPNVFMSMQPLPAPANHSYQSVMVPQP 420
           L+K+ +                 T P +    S P               SY +      
Sbjct: 361 LSKSES-----------------TVPVSDTNASFP---------------SYNN------ 420

Query: 421 TMQSQASNSQTQYQMLPSAPSQQYLQLSNGVLTPYGYGSLPNSTP--VPPPPMPHMVSPV 480
             Q+Q   +Q QY ++P+ P  Q+L+    +  PY +G++P   P   PPPP PH++   
Sbjct: 421 -SQNQTPTTQGQYHVIPNPPPPQFLK-PPVMNNPYAFGNIPLMPPGLPPPPPPPHLIG-- 466

Query: 481 VPLTQQMLQQTIPLAQQPSPMIQTQPVPFTQQPLAPSFRPLQPPGMVYYGHP 518
                          QQP  + Q+     +QQ   P+F   QPPG++YYG P
Sbjct: 481 --------------NQQPQ-IPQSNSAQQSQQ--GPTF---QPPGIMYYGAP 466

[Close]

BLAST of IVF0017203 vs. TAIR 10
Match: AT5G65180.1 (ENTH/VHS family protein )

HSP 1 Score: 405.6 bits (1041), Expect = 6.0e-113
Identity = 243/443 (54.85%), Postives = 315/443 (71.11%), Query Frame = 0


Query: 1   MNSVFSEQILADKLSKLNSTQQCIETLSHWCIFHRGKAELVVATWDKQFHNSEMVQKVPL 60
           M+S FSE+IL D L+KLNSTQQ I+TLS WCI HR +AELVV TW+KQFH++++ QKVPL
Sbjct: 1   MSSPFSEEILIDNLAKLNSTQQSIQTLSQWCIVHRSEAELVVTTWEKQFHSTQIGQKVPL 60

Query: 61  LYLANDILQNSKRKGNEFVTEFWKVLPSALKDVLENGDSHGKNVISRLVDIWEQRKVFGS 120
           LYLANDILQNSKR+GNEFV EFWKVLP ALKD++  GD +GK V+SRLV+IWE+R+VFGS
Sbjct: 61  LYLANDILQNSKRQGNEFVQEFWKVLPGALKDIVSLGDDYGKGVVSRLVNIWEERRVFGS 120

Query: 121 RTRSLKDVILGEEAPPPLEFSKK----THSISQNCQKRFTKLSIGSAAEKIVSAFHLVLS 180
           R++SLKDV+L EEAPPPL+ SKK    + S  ++ +   TKLS G  +EKIVSAF+LV +
Sbjct: 121 RSKSLKDVMLSEEAPPPLDVSKKRFRGSKSAKRDSKSTKTKLSSGGVSEKIVSAFNLVRA 180

Query: 181 EYSNEETEMTNCISAVQRVRKMENDVDFACSMAKNPQRKKLAKELEEEESVLKQCIEKLQ 240
           E SNEETEM  C SAV+R+RKME DV+ ACS AK+P+++ LAKELEEEE++L+Q +EKL+
Sbjct: 181 ENSNEETEMNKCKSAVRRIRKMEKDVEDACSTAKDPRKESLAKELEEEENILRQSVEKLK 240

Query: 241 SVEASRLALISQLKEALHVQESELENIRTQMQVAQAQAEEAKNMQNRLNDEGYLSKTSIT 300
           SVE SR +L++ L+EAL  QESELEN+++Q+QVAQ Q EEA+NMQ RLN+E     T + 
Sbjct: 241 SVEESRTSLVNHLREALREQESELENLQSQIQVAQEQTEEAQNMQKRLNNE-----TPVN 300

Query: 301 DSNAKMGQTPKKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAKHTGLTKNN-NGL 360
           ++N   GQ+ K + A+IAA +A+ L +S++S MIM SVLS+FAAE  + +GLTK+N +  
Sbjct: 301 NNNGTSGQSAKITPASIAA-MAEMLTSSTNSSMIMHSVLSSFAAEATQTSGLTKSNTSDT 360

Query: 361 NAFASKPMRSSANSITKPEAS-----AVGSDPNVFMSMQPLPAPANHSYQSVMVPQPTMQ 420
           NAF   P     + I  P AS       G+ P   M    LP P          P  T+ 
Sbjct: 361 NAFVVPPNPQQYHIIPNPAASQQFPYGFGNIP--LMPPGALPPP----------PPGTLP 420

Query: 421 SQASNSQTQYQMLPSAPSQQYLQ 434
               N+  Q    P+A  QQ  Q
Sbjct: 421 PHMMNNNNQ----PNAAQQQAQQ 421

[Close]

BLAST of IVF0017203 vs. TAIR 10
Match: AT3G26990.1 (ENTH/VHS family protein )

HSP 1 Score: 210.7 bits (535), Expect = 2.8e-54
Identity = 177/516 (34.30%), Postives = 256/516 (49.61%), Query Frame = 0


Query: 1   MNSVFSEQILADKLSKLNSTQQCIETLSHWCIFHRGKAELVVATWDKQFHNSEMVQKVPL 60
           M S F+ QIL +KL+KLN++Q  IETLSHWCIFH  KA+ VV TW +QFH +   Q++  
Sbjct: 1   MGSSFNAQILVEKLAKLNNSQASIETLSHWCIFHMNKAKHVVETWGRQFHCAPREQRLAY 60

Query: 61  LYLANDILQNSKRKGNEFVTEFWKVLPSALKDVLENGDSHGKNVISRLVDIWEQRKVFGS 120
           LYLANDILQNS+RKG+EFV EFWKVLP AL+D++ENGD  G+    RLV+IWE+RKVFGS
Sbjct: 61  LYLANDILQNSRRKGSEFVGEFWKVLPDALRDMIENGDDFGRKSARRLVNIWEERKVFGS 120

Query: 121 RTRSLKDVILGEEAPPPLEFSKKTHSISQNCQKRFTKLSI------GSAAEKIVSAFHLV 180
           R + LK+ +LG          ++  + ++N      KLS+      GS  EK+VSA  ++
Sbjct: 121 RGQILKEELLG----------RQPENGTRNGNLVPLKLSVPQRQVNGSTLEKVVSAVEVL 180

Query: 181 LSEYSNEETEMTNCISAVQRVRKMENDVDFACSMAKNPQRKKLAKELEEEESVLKQCIEK 240
                +E+  +    +A   + K   +V+   S    P    + KEL+ +  +L+ CIE+
Sbjct: 181 HGVQIDEDALVGKSTNAAGYLEKATQEVERDLSSGHAP-GPAVVKELQGQHVILRDCIEQ 240

Query: 241 LQSVEASRLALISQLKEALHVQESELENIRTQMQVAQAQAEEAKNMQNRLNDEGYLSKTS 300
           L ++E SR +LIS L+EAL  QE +LE +R  +Q+A+ Q++   ++  +L D G  S+  
Sbjct: 241 LGAMETSRTSLISHLREALQEQELKLEQVRNHLQIARFQSDRTGDLCRQLLDHGGSSQPP 300

Query: 301 ITDSNAKMGQTPKKSAAA--------------------------------IAAEVADKLA 360
            T+           S AA                                 AA V  KL 
Sbjct: 301 ATEEEESKEVIKVSSTAAAPQSFTHSDVEQSAPVMFASNPTQSLEDPRKTAAAAVVAKLT 360

Query: 361 ASSSSQMIMTSVLSTFAAEEAKHTGLTKNNNGLNAFASKPMRSSANSITKPEASAVGSDP 420
           AS+SS  +++ VLS+ A+E     G+  NNN         +  + +S+  P         
Sbjct: 361 ASTSSAEMLSYVLSSLASE-----GIIGNNN------PPAVTETLSSVDFPP-------- 420

Query: 421 NVFMSMQPLPAPANHSYQSVMVPQPTMQSQASNSQTQYQMLPSAPSQQYLQLSNGVLTPY 479
                 +  P   NH  QS + P     +  ++S T  Q LP  P  Q        L P 
Sbjct: 421 ------EKRPKLQNHD-QSYLSPH-HQNTATTSSSTPPQPLPPPPPFQ--------LQPQ 470

[Close]

BLAST of IVF0017203 vs. TAIR 10
Match: AT5G65180.2 (ENTH/VHS family protein )

HSP 1 Score: 206.8 bits (525), Expect = 4.1e-53
Identity = 150/315 (47.62%), Postives = 202/315 (64.13%), Query Frame = 0


Query: 129 ILGEEAPPPLEFSKK----THSISQNCQKRFTKLSIGSAAEKIVSAFHLVLSEYSNEETE 188
           +L EEAPPPL+ SKK    + S  ++ +   TKLS G  +EKIVSAF+LV +E SNEETE
Sbjct: 1   MLSEEAPPPLDVSKKRFRGSKSAKRDSKSTKTKLSSGGVSEKIVSAFNLVRAENSNEETE 60

Query: 189 MTNCISAVQRVRKMENDVDFACSMAKNPQRKKLAKELEEEESVLKQCIEKLQSVEASRLA 248
           M  C SAV+R+RKME DV+ ACS AK+P+++ LAKELEEEE++L+Q +EKL+SVE SR +
Sbjct: 61  MNKCKSAVRRIRKMEKDVEDACSTAKDPRKESLAKELEEEENILRQSVEKLKSVEESRTS 120

Query: 249 LISQLKEALHVQESELENIRTQMQVAQAQAEEAKNMQNRLNDEGYLSKTSITDSNAKMGQ 308
           L++ L+EAL  QESELEN+++Q+QVAQ Q EEA+NMQ RLN+E     T + ++N   GQ
Sbjct: 121 LVNHLREALREQESELENLQSQIQVAQEQTEEAQNMQKRLNNE-----TPVNNNNGTSGQ 180

Query: 309 TPKKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAKHTGLTKNN-NGLNAFASKPM 368
           + K + A+IAA +A+ L +S++S MIM SVLS+FAAE  + +GLTK+N +  NAF   P 
Sbjct: 181 SAKITPASIAA-MAEMLTSSTNSSMIMHSVLSSFAAEATQTSGLTKSNTSDTNAFVVPPN 240

Query: 369 RSSANSITKPEAS-----AVGSDPNVFMSMQPLPAPANHSYQSVMVPQPTMQSQASNSQT 428
               + I  P AS       G+ P   M    LP P          P  T+     N+  
Sbjct: 241 PQQYHIIPNPAASQQFPYGFGNIP--LMPPGALPPP----------PPGTLPPHMMNNNN 293

Query: 429 QYQMLPSAPSQQYLQ 434
           Q    P+A  QQ  Q
Sbjct: 301 Q----PNAAQQQAQQ 293

The following BLAST results are available for this feature:

BLAST of IVF0017203 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9CSU0	1.1e-23	30.54	Regulation of nuclear pre-mRNA domain-containing protein 1B OS=Mus musculus OX=1...	[more]
Q9NQG5	2.5e-23	30.20	Regulation of nuclear pre-mRNA domain-containing protein 1B OS=Homo sapiens OX=9...	[more]
Q0P5J9	4.0e-21	28.47	Regulation of nuclear pre-mRNA domain-containing protein 1A OS=Bos taurus OX=991...	[more]
Q96P16	4.0e-21	28.47	Regulation of nuclear pre-mRNA domain-containing protein 1A OS=Homo sapiens OX=9...	[more]
Q5R8Y3	4.0e-21	28.47	Regulation of nuclear pre-mRNA domain-containing protein 1A OS=Pongo abelii OX=9...	[more]

BLAST of IVF0017203 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TML3	6.9e-274	96.95	Regulation of nuclear pre-mRNA domain-containing protein 1B OS=Cucumis melo var....	[more]
A0A1S3BWJ3	6.9e-274	96.95	regulation of nuclear pre-mRNA domain-containing protein 1B OS=Cucumis melo OX=3...	[more]
A0A0A0KWH8	4.3e-268	95.24	CID domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G031050 PE=4 SV...	[more]
A0A6J1C8E3	2.0e-249	89.96	regulation of nuclear pre-mRNA domain-containing protein 1B-like OS=Momordica ch...	[more]
A0A6J1EM93	8.8e-245	87.62	regulation of nuclear pre-mRNA domain-containing protein 1A-like isoform X1 OS=C...	[more]

BLAST of IVF0017203 vs. NCBI nr


Match Name	Identity	Description
KAA0044733.1	97.33	regulation of nuclear pre-mRNA domain-containing protein 1B [Cucumis melo var. m...	[more]
XP_008453770.1	97.33	PREDICTED: regulation of nuclear pre-mRNA domain-containing protein 1B [Cucumis ...	[more]
KAE8637566.1	95.62	hypothetical protein CSA_017843 [Cucumis sativus]	[more]
XP_031745821.1	95.62	regulation of nuclear pre-mRNA domain-containing protein 1B-like [Cucumis sativu...	[more]
XP_031739595.1	95.06	LOW QUALITY PROTEIN: regulation of nuclear pre-mRNA domain-containing protein 1B...	[more]

BLAST of IVF0017203 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G10060.1	1.3e-118	50.56	ENTH/VHS family protein	[more]
AT5G65180.1	6.0e-113	54.85	ENTH/VHS family protein	[more]
AT3G26990.1	2.8e-54	34.30	ENTH/VHS family protein	[more]
AT5G65180.2	4.1e-53	47.62	ENTH/VHS family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 246..287
None	No IPR available	COILS	Coil	Coil	coord: 214..241
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 487..501
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 487..521
None	No IPR available	PANTHER	PTHR12460:SF27	ENTH/VHS FAMILY PROTEIN	coord: 1..518
None	No IPR available	PANTHER	PTHR12460	CYCLIN-DEPENDENT KINASE INHIBITOR-RELATED PROTEIN	coord: 1..518
None	No IPR available	CDD	cd16981	CID_RPRD_like	coord: 7..121 e-value: 4.75799E-57 score: 184.321
IPR006569	CID domain	SMART	SM00582	558neu5	coord: 9..130 e-value: 2.3E-39 score: 146.8
IPR006569	CID domain	PFAM	PF04818	CID	coord: 9..121 e-value: 1.3E-32 score: 112.6
IPR006569	CID domain	PROSITE	PS51391	CID	coord: 2..134 score: 41.940132
IPR008942	ENTH/VHS	GENE3D	1.25.40.90		coord: 4..133 e-value: 1.0E-37 score: 131.2
IPR008942	ENTH/VHS	SUPERFAMILY	48464	ENTH/VHS domain	coord: 8..118

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0017203.2	IVF0017203.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006397	mRNA processing
molecular_function	GO:0003676	nucleic acid binding