IVF0017059 (gene) Melon (IVF77) v1

Overview


Name	IVF0017059
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Reticulon domain-containing protein
Location	chr09: 8065981 .. 8069812 (-)
RNA-Seq Expression	IVF0017059
Synteny	IVF0017059

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATAAAGGAGATGAAATTTAGGTGAGGAAAAGATATAGAAAATTAAAGAAAAGAAAGGTGGAAGGAAAGACTGGGCGTTATGGGTTTGACGAATCATACACTTTGATATTTGGCAATGCGTAGAGAGGGCGGACGATAATGAGTCAAATTGGGGGAAGGATCGAGGGTTTGAGAGACACACCAATGGCGAGTCGATCAATCAACTGCAAGACAGAGGTTGGCAAACCCTTTGTTGCTCTCACTTGCGGTTCTTTGGTTTATTATCATTGCGCCTTTCGAAATTCCAGTCTTCTCTCCCTTGTCGCTGATGTTTTCATCGTTCTCCTTTGCTCTCTCGCCATTCTCGGCCTTCTCTTCCGCCATATGAACGTCTCGTAAGCATTCCCTTATTTCCGCCACTTTTTTTTTTTTTTTTTTTTACTAGATTGGAGAACTTCTTCCAGATTGTTTTAAATGCTTCGGATTTTATGTCAACGATCGTATTAGTCCAATGTTGTTGAAATTAGATACTCAATCTGTATGCAGATCCTTATTCTCGTAATTATCTTTAATTAACATAATCTGTAATCTAAAATTTAAATCATCTGTAGGGTTCCAGTAGATCCTCTTGAGTGGCAAATATCGCAGGATACTGCTAATAGTATGATTGCTTGGTTAGCCAATACAATTGGTGCGGCTGAGTCTGTTCTGAGGGTGGCAGCTACAGGGCATGACAAGAGGCTTTTTGTTAAGGTATTGTTCTTTGATTATCACATTAGTGGCCTCTTACACAGTTTTGGGTAGTCTTAAATTGGCTTCTTTCTTTGAGTTTTGGGTTATTATTTGTACTCGAATTGGTCCTTTTTTCTTCTGTTTTTTTAAACTTTTATTTTCTCTGTGAAACATAAATTCCTTCGTTTCAAATAATATATGAAATTACAAAAAGAGAGGTATCCTTTGTATCAAAGGAAATTACAAAAAGCGCTTACGTTGGCTATAGGAGCAGTAAGACACAATAGGTATCCAACAAGCTATCTGAGAATACACAACAAATAACAGCAAGATTAGAAAGATGTTAAGAAAAAAAACATCTTTTTCTCCTTCAGCCAAATGTATCATAGAAAGGACTTAATGAAATCGAGCCAAATAGCTTCCCTTTCTTTCTTGAATGGCGCAGATTCCAGTGATGATAAAGAGTCCCTTGGTAGAGCCATTAGTAATGATAAAGAGTCCAATTGAAAACAAAATTATGGTCTTCCAAAATCCCATTAGCAAGGAATTTAAAGTTCTCTATCTATGTTAACTCCCCTTGAAATTGAAAGATTATTGTATGTATGGAAAGTTCGAAGGTAAAATTTAATTACTAGCACCGCCCATGATTAAGCTTGCCGTCTTAATCCGCCTAAGGTTTTAAAAAATTGCAATCCAATTGTCTTGACAATCCCGTAAACTTTATTATAAATCTATTTCTTTCCTTACCCAGCTTTATGCTAAATTGAAGGCAGGATCCATATGTGTCACATTGGGAAAATATTGCAAATCCTATTCAAAATAAACTTGCAACCTCCTTTTCATGAACTTTTCCATTCTTTTCTTAAAAATTTAATTTGAAAATCTTGTGCCATTTCCAGATAATGACTTCTCATTTTTCTCCTCAAAATGACAGCAATCCATCGTTTTCTTATGTTGCCAGAAAAGCAGAATATTTAACATGTTTACCTAACGATTTGTACATTTCTCCAAACTCATTATAACCATGCTGTCCAGGGAGACATGCGTTACAGTACGTTATCTTCCTAAATCTTTTCTAAACTGACATTTTGGGACAAATGCTTCCCTAGCGCGTTCCTTGAAAAACATTTGTTCTTTGGGTTATACAACTGTATCCTTATACTTGAGTCTGAAACAAGCATTTTCCTTATCACTACCCTGACAAATTTATATAAACATGTCTAAGTGCCACATGATTTCAAACCTTTCTTACATCCCATGCATGGAGTCGAAAATGTGATATTGTAAAAATAAATAAATTGTATATCTAACAGATTTATTGCACACCCTAGGTATTTGTTCATCTAGATCAAATATCAAACATTGTGTAATTGGCATCAGCTTACATTGATACACGATGAGGTTTCAGCAGCACATATTATAGGTTAAATGGTACAAAATACTTATAAACTTTAGTGTATCTAATCATGTCCTTGACAATAGTAAATTTTCATTTTGACCTTTACACTTCGGAATTGTTCCAATAAATTCATTTGGAAATCCTCTCTTGGCATATGTGATGAGTTATTTTTGCTACTATTTATTAGGCCATATTTTGTTAGATTGGAGACCTTTATTATAGGGTGCTCCCTTCCCTTTTGAGCTTGGTTTTTTTGTATGTAGGGTTTATGGTTTAGTATTCTTTCATTTTTTTCCTCAACGAAGGATGATCCTTTATCAAAAAATAATAAAAAATAACAATGTACAAAACAGCTATGGTATAAATTGACAATGCAGACATGATGTCATTTACAACATTATTATGTAAATTGACTTGGCATCTGATATGTAAAATTTGATTTTGTGAATGATGTTTAAATGATGTCGATGATATCTTGCTATATTGAAATGAATAGTAACAACGATCTTATTAGTTTATATGGTTGAAATTGAGTTGTAACCAATTCTATATGTGCTTTTCAATATATACTATTCATTATTTCATTTTTACAACAAAAAGGGAGAAATGCTAAAATGAATATGTGGGAGGACCAAATGAATTCTACTTTCATTTCTCCCTATAAAGCACAAAAGGTCGAGGTTTAAAAAGGACATAAATAAAAATTATTTCAAATGTCAGAAGTACACATGATATACGTGACACCGTCCAGGAGATCTAAGTTGCTCTACCTGATAAGGCCTTTCAAAGAACCAACTCGTAAAAAGAATATGTGTATTGATCTGTCATCTTTTGCTTGTAAATTAAAAGTCAGGCAAATCTTTCTGTAGGTCGTTGTTTGCCTTTACGCTCTCTCGGTGCTTGGAAGATTGGTCTCAGGTGTTACAGTTGCCTATACTGGTATGTCTGGCCTTCCTAATTGTCTCTACTTTTTTTCTATCTTACAAGATAATAAATATGCATGATGTTTTGATAGGACATTTTTCTATGCTCTTCACTCGTCATGTGGTGAAGCATTGCAGTTGAATTTGTTTTACCAATCTGATTTGTCGCCTATTTGCAATGTTGCTAGACTTATTGTTATAATTTTAAAAGATTATGCTGAGTCTCATTTCTTTTTATATTAGGGATAGTTAAAATCTTTTTGCATATTTATGGATTTCTGCGCAATTGATTCTAGTAGCTCTGGATTAACAGGTTTATGTATGTTGTGTATATACATGGTGTTGGAGAATTCTGAGTCAATAAGTGCTGCTATTTCTCCTTTTCTTAGGAGAGGAAATGAACGTACTTCACATCAAGATGCTATCTAATCTTCACTGGCTGTTGCCCTGTTTTTCTTTTTTCTTTTTTTACTGTAGATGAATCTGTGAATATTATCGTTAACAGAATTTGTTTAGGCGGAATGGAGTAATAAAAGAATTTTAGGAGCCATTATTGATTACTGATTGACCATTGTGAGTGTTTTTTTTTTTTTTTTTGTGAAGTTGAAGTGATTTTTGTATGGTAAAGAAAATATTTGCCAGGACAGTCACTTGGGTTAATGAAATATTTGTACCAAGTTCCAAGGGATGTTTAGAAGCAAGTTTGGTTTGATTCTACAATATTTGTATAGGATTTGTTAGGTTGTACTACTACGTCCTTCCATTCTAAAGTTTGGTTTGGTTTGGTTTGTTTGTTTG

mRNA sequence

AAATAAAGGAGATGAAATTTAGGTGAGGAAAAGATATAGAAAATTAAAGAAAAGAAAGGTGGAAGGAAAGACTGGGCGTTATGGGTTTGACGAATCATACACTTTGATATTTGGCAATGCGTAGAGAGGGCGGACGATAATGAGTCAAATTGGGGGAAGGATCGAGGGTTTGAGAGACACACCAATGGCGAGTCGATCAATCAACTGCAAGACAGAGGTTGGCAAACCCTTTGTTGCTCTCACTTGCGGTTCTTTGGTTTATTATCATTGCGCCTTTCGAAATTCCAGTCTTCTCTCCCTTGTCGCTGATGTTTTCATCGTTCTCCTTTGCTCTCTCGCCATTCTCGGCCTTCTCTTCCGCCATATGAACGTCTCGGTTCCAGTAGATCCTCTTGAGTGGCAAATATCGCAGGATACTGCTAATAGTATGATTGCTTGGTTAGCCAATACAATTGGTGCGGCTGAGTCTGTTCTGAGGGTGGCAGCTACAGGGCATGACAAGAGGCTTTTTGTTAAGGTCGTTGTTTGCCTTTACGCTCTCTCGGTGCTTGGAAGATTGGTCTCAGGTGTTACAGTTGCCTATACTGGTTTATGTATGTTGTGTATATACATGGTGTTGGAGAATTCTGAGTCAATAAGTGCTGCTATTTCTCCTTTTCTTAGGAGAGGAAATGAACGTACTTCACATCAAGATGCTATCTAATCTTCACTGGCTGTTGCCCTGTTTTTCTTTTTTCTTTTTTTACTGTAGATGAATCTGTGAATATTATCGTTAACAGAATTTGTTTAGGCGGAATGGAGTAATAAAAGAATTTTAGGAGCCATTATTGATTACTGATTGACCATTGTGAGTGTTTTTTTTTTTTTTTTTGTGAAGTTGAAGTGATTTTTGTATGGTAAAGAAAATATTTGCCAGGACAGTCACTTGGGTTAATGAAATATTTGTACCAAGTTCCAAGGGATGTTTAGAAGCAAGTTTGGTTTGATTCTACAATATTTGTATAGGATTTGTTAGGTTGTACTACTACGTCCTTCCATTCTAAAGTTTGGTTTGGTTTGGTTTGTTTGTTTG

Coding sequence (CDS)

ATGAGTCAAATTGGGGGAAGGATCGAGGGTTTGAGAGACACACCAATGGCGAGTCGATCAATCAACTGCAAGACAGAGGTTGGCAAACCCTTTGTTGCTCTCACTTGCGGTTCTTTGGTTTATTATCATTGCGCCTTTCGAAATTCCAGTCTTCTCTCCCTTGTCGCTGATGTTTTCATCGTTCTCCTTTGCTCTCTCGCCATTCTCGGCCTTCTCTTCCGCCATATGAACGTCTCGGTTCCAGTAGATCCTCTTGAGTGGCAAATATCGCAGGATACTGCTAATAGTATGATTGCTTGGTTAGCCAATACAATTGGTGCGGCTGAGTCTGTTCTGAGGGTGGCAGCTACAGGGCATGACAAGAGGCTTTTTGTTAAGGTCGTTGTTTGCCTTTACGCTCTCTCGGTGCTTGGAAGATTGGTCTCAGGTGTTACAGTTGCCTATACTGGTTTATGTATGTTGTGTATATACATGGTGTTGGAGAATTCTGAGTCAATAAGTGCTGCTATTTCTCCTTTTCTTAGGAGAGGAAATGAACGTACTTCACATCAAGATGCTATCTAA

Protein sequence

MSQIGGRIEGLRDTPMASRSINCKTEVGKPFVALTCGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAAISPFLRRGNERTSHQDAI

Homology

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BLAST of IVF0017059 vs. ExPASy Swiss-Prot
Match: Q8GWH5 (Reticulon-like protein B22 OS=Arabidopsis thaliana OX=3702 GN=RTNLB22 PE=2 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 1.7e-54
Identity = 110/161 (68.32%), Postives = 134/161 (83.23%), Query Frame = 0


Query: 26  EVGKPFVALTCGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPL 85
           E+GK    L  G+LVYYHCA+RN++LLSL +DVFIVLLCSLAILGLLFR +NVSVPVDPL
Sbjct: 3   EMGKAMGLLISGTLVYYHCAYRNATLLSLFSDVFIVLLCSLAILGLLFRQLNVSVPVDPL 62

Query: 86  EWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVT 145
           EWQISQDTA++++A LANT+GAAE VLRVAATGHDKRLFVKVV+CLY LS LGRL+SGVT
Sbjct: 63  EWQISQDTASNIVARLANTVGAAEGVLRVAATGHDKRLFVKVVICLYFLSALGRLISGVT 122

Query: 146 VAYTGLCMLCIYMVLENSESISAAISPFLRRGNERTSHQDA 187
           VAY GLC+ C+ M+ + S+S+   +   L+RGN +   Q+A
Sbjct: 123 VAYAGLCLFCLSMLCQTSQSLGNCV---LKRGNGQILEQEA 160

[Close]

BLAST of IVF0017059 vs. ExPASy Swiss-Prot
Match: P0C941 (Reticulon-like protein B23 OS=Arabidopsis thaliana OX=3702 GN=RTNLB23 PE=2 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 2.8e-49
Identity = 99/138 (71.74%), Postives = 120/138 (86.96%), Query Frame = 0


Query: 26  EVGKPFVALTCGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPL 85
           E+GK    L  G+LVY+HCA RN++LLSL++DV IVLL SLAILGLLFRH+NVSVPVDPL
Sbjct: 3   EMGKAIGLLISGTLVYHHCANRNATLLSLISDVLIVLLSSLAILGLLFRHLNVSVPVDPL 62

Query: 86  EWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVT 145
           EWQISQDTA +++A LANT+GAAESVLRVAATGHDKRLFVKVV+CLY L+ LGR++SGVT
Sbjct: 63  EWQISQDTACNIVARLANTVGAAESVLRVAATGHDKRLFVKVVICLYFLAALGRIISGVT 122

Query: 146 VAYTGLCMLCIYMVLENS 164
           +AY GLC+ C+ M+  +S
Sbjct: 123 IAYAGLCLFCLSMLFRSS 140

[Close]

BLAST of IVF0017059 vs. ExPASy TrEMBL
Match: A0A1S3CPH6 (reticulon-like protein B22 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103503325 PE=4 SV=1)

HSP 1 Score: 362.1 bits (928), Expect = 1.4e-96
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 0


Query: 1   MSQIGGRIEGLRDTPMASRSINCKTEVGKPFVALTCGSLVYYHCAFRNSSLLSLVADVFI 60
           MSQIGGRIEGLRDTPMASRSINCKTEVGKPFVALTCGSLVYYHCAFRNSSLLSLVADVFI
Sbjct: 1   MSQIGGRIEGLRDTPMASRSINCKTEVGKPFVALTCGSLVYYHCAFRNSSLLSLVADVFI 60

Query: 61  VLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHD 120
           VLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHD
Sbjct: 61  VLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHD 120

Query: 121 KRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAAISPFLRRGNER 180
           KRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAAISPFLRRGNER
Sbjct: 121 KRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAAISPFLRRGNER 180

Query: 181 TSHQDAI 188
           TSHQDAI
Sbjct: 181 TSHQDAI 187

[Close]

BLAST of IVF0017059 vs. ExPASy TrEMBL
Match: A0A0A0KQM7 (Reticulon domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G487710 PE=4 SV=1)

HSP 1 Score: 351.7 bits (901), Expect = 1.9e-93
Identity = 182/187 (97.33%), Postives = 183/187 (97.86%), Query Frame = 0


Query: 1   MSQIGGRIEGLRDTPMASRSINCKTEVGKPFVALTCGSLVYYHCAFRNSSLLSLVADVFI 60
           MSQIGGRIEGLRDT MASRSINCKTEVGKPFVAL CGSLVYYHCAFRNSSLLSLVADVFI
Sbjct: 2   MSQIGGRIEGLRDTQMASRSINCKTEVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFI 61

Query: 61  VLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHD 120
           VLLCSLAILGLLFRHMNVSVPVDPLEWQ+SQDTANSMIAWLANTIGAAESVLRVAATGHD
Sbjct: 62  VLLCSLAILGLLFRHMNVSVPVDPLEWQVSQDTANSMIAWLANTIGAAESVLRVAATGHD 121

Query: 121 KRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAAISPFLRRGNER 180
           KRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAAISP LRRGNER
Sbjct: 122 KRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAAISPILRRGNER 181

Query: 181 TSHQDAI 188
           TSHQD I
Sbjct: 182 TSHQDDI 188

[Close]

BLAST of IVF0017059 vs. ExPASy TrEMBL
Match: A0A6J1I734 (reticulon-like protein B22 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111471842 PE=4 SV=1)

HSP 1 Score: 324.3 bits (830), Expect = 3.3e-85
Identity = 168/187 (89.84%), Postives = 176/187 (94.12%), Query Frame = 0


Query: 1   MSQIGGRIEGLRDTPMASRSINCKTEVGKPFVALTCGSLVYYHCAFRNSSLLSLVADVFI 60
           M+QI GR E L+D  MA+RSI+CKTEVGKP VAL CGSLVYYHCA+RNSSLLSLVADVFI
Sbjct: 1   MNQIEGRSESLKDAEMANRSISCKTEVGKPLVALICGSLVYYHCAYRNSSLLSLVADVFI 60

Query: 61  VLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHD 120
           VLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHD
Sbjct: 61  VLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHD 120

Query: 121 KRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAAISPFLRRGNER 180
           KRLFVKV+V LYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISA ISPFLRRGN+ 
Sbjct: 121 KRLFVKVIVSLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAFISPFLRRGNDP 180

Query: 181 TSHQDAI 188
            SHQD+I
Sbjct: 181 ISHQDSI 187

[Close]

BLAST of IVF0017059 vs. ExPASy TrEMBL
Match: A0A6J1GJ96 (reticulon-like protein B22 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111454742 PE=4 SV=1)

HSP 1 Score: 324.3 bits (830), Expect = 3.3e-85
Identity = 168/187 (89.84%), Postives = 176/187 (94.12%), Query Frame = 0


Query: 1   MSQIGGRIEGLRDTPMASRSINCKTEVGKPFVALTCGSLVYYHCAFRNSSLLSLVADVFI 60
           M+QI GR E L+D  MA+RSI+CKTEVGKP VAL CGSLVYYHCA+RNSSLLSLVADVFI
Sbjct: 1   MNQIEGRSESLKDAEMANRSISCKTEVGKPLVALICGSLVYYHCAYRNSSLLSLVADVFI 60

Query: 61  VLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHD 120
           VLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHD
Sbjct: 61  VLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHD 120

Query: 121 KRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAAISPFLRRGNER 180
           KRLFVKV+V LYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISA ISPFLRRGN+ 
Sbjct: 121 KRLFVKVIVSLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAFISPFLRRGNDP 180

Query: 181 TSHQDAI 188
            SHQD+I
Sbjct: 181 ISHQDSI 187

[Close]

BLAST of IVF0017059 vs. ExPASy TrEMBL
Match: A0A6J1D9M0 (reticulon-like protein B22 OS=Momordica charantia OX=3673 GN=LOC111018504 PE=4 SV=1)

HSP 1 Score: 302.0 bits (772), Expect = 1.7e-78
Identity = 156/187 (83.42%), Postives = 170/187 (90.91%), Query Frame = 0


Query: 1   MSQIGGRIEGLRDTPMASRSINCKTEVGKPFVALTCGSLVYYHCAFRNSSLLSLVADVFI 60
           MSQIG R E    + MA+R+I+  T++GKP VAL CGSLVYYHCAFRNSSLLSLVADVFI
Sbjct: 2   MSQIGRRSE----SEMANRTIHSTTQLGKPMVALICGSLVYYHCAFRNSSLLSLVADVFI 61

Query: 61  VLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHD 120
           VLLCSLAILGLLFRHMN+SVPVDPLEWQISQDTAN ++AWLANTIGAAESVLRVAATGHD
Sbjct: 62  VLLCSLAILGLLFRHMNISVPVDPLEWQISQDTANGLVAWLANTIGAAESVLRVAATGHD 121

Query: 121 KRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAAISPFLRRGNER 180
           KRLF+KVVVCLYALSVLGRLVSGVTVAYTGLCMLC+YMVLENSES S ++ PF RRGN+ 
Sbjct: 122 KRLFLKVVVCLYALSVLGRLVSGVTVAYTGLCMLCVYMVLENSESTSGSVFPFSRRGNDP 181

Query: 181 TSHQDAI 188
           TSHQDAI
Sbjct: 182 TSHQDAI 184

[Close]

BLAST of IVF0017059 vs. NCBI nr
Match: XP_008465703.1 (PREDICTED: reticulon-like protein B22 isoform X2 [Cucumis melo])

HSP 1 Score: 360 bits (925), Expect = 2.43e-125
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 0


Query: 1   MSQIGGRIEGLRDTPMASRSINCKTEVGKPFVALTCGSLVYYHCAFRNSSLLSLVADVFI 60
           MSQIGGRIEGLRDTPMASRSINCKTEVGKPFVALTCGSLVYYHCAFRNSSLLSLVADVFI
Sbjct: 1   MSQIGGRIEGLRDTPMASRSINCKTEVGKPFVALTCGSLVYYHCAFRNSSLLSLVADVFI 60

Query: 61  VLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHD 120
           VLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHD
Sbjct: 61  VLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHD 120

Query: 121 KRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAAISPFLRRGNER 180
           KRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAAISPFLRRGNER
Sbjct: 121 KRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAAISPFLRRGNER 180

Query: 181 TSHQDAI 187
           TSHQDAI
Sbjct: 181 TSHQDAI 187

[Close]

BLAST of IVF0017059 vs. NCBI nr
Match: XP_011655303.1 (reticulon-like protein B22 [Cucumis sativus] >KGN51194.1 hypothetical protein Csa_009004 [Cucumis sativus])

HSP 1 Score: 350 bits (898), Expect = 3.30e-121
Identity = 182/187 (97.33%), Postives = 183/187 (97.86%), Query Frame = 0


Query: 1   MSQIGGRIEGLRDTPMASRSINCKTEVGKPFVALTCGSLVYYHCAFRNSSLLSLVADVFI 60
           MSQIGGRIEGLRDT MASRSINCKTEVGKPFVAL CGSLVYYHCAFRNSSLLSLVADVFI
Sbjct: 2   MSQIGGRIEGLRDTQMASRSINCKTEVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFI 61

Query: 61  VLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHD 120
           VLLCSLAILGLLFRHMNVSVPVDPLEWQ+SQDTANSMIAWLANTIGAAESVLRVAATGHD
Sbjct: 62  VLLCSLAILGLLFRHMNVSVPVDPLEWQVSQDTANSMIAWLANTIGAAESVLRVAATGHD 121

Query: 121 KRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAAISPFLRRGNER 180
           KRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAAISP LRRGNER
Sbjct: 122 KRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAAISPILRRGNER 181

Query: 181 TSHQDAI 187
           TSHQD I
Sbjct: 182 TSHQDDI 188

[Close]

BLAST of IVF0017059 vs. NCBI nr
Match: XP_038889154.1 (reticulon-like protein B22 [Benincasa hispida])

HSP 1 Score: 338 bits (866), Expect = 2.41e-116
Identity = 173/187 (92.51%), Postives = 182/187 (97.33%), Query Frame = 0


Query: 1   MSQIGGRIEGLRDTPMASRSINCKTEVGKPFVALTCGSLVYYHCAFRNSSLLSLVADVFI 60
           MSQIG R EGLR+T MA+R+INCKTEVGKPFVAL CGSL+YYHCA+RNSSLLSLVADVFI
Sbjct: 1   MSQIGRRNEGLRETEMANRTINCKTEVGKPFVALICGSLIYYHCAYRNSSLLSLVADVFI 60

Query: 61  VLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHD 120
           VLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSM+AWLANTIGAAESVLRVAATGHD
Sbjct: 61  VLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMVAWLANTIGAAESVLRVAATGHD 120

Query: 121 KRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAAISPFLRRGNER 180
           KRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISA+ISPF+RRGN+ 
Sbjct: 121 KRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISASISPFIRRGNDP 180

Query: 181 TSHQDAI 187
           TSHQDAI
Sbjct: 181 TSHQDAI 187

[Close]

BLAST of IVF0017059 vs. NCBI nr
Match: XP_022952032.1 (reticulon-like protein B22 isoform X1 [Cucurbita moschata] >XP_022973272.1 reticulon-like protein B22 isoform X1 [Cucurbita maxima] >XP_023536692.1 reticulon-like protein B22 isoform X1 [Cucurbita pepo subsp. pepo] >KAG6585840.1 Reticulon-like protein B22, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 323 bits (827), Expect = 2.12e-110
Identity = 168/187 (89.84%), Postives = 176/187 (94.12%), Query Frame = 0


Query: 1   MSQIGGRIEGLRDTPMASRSINCKTEVGKPFVALTCGSLVYYHCAFRNSSLLSLVADVFI 60
           M+QI GR E L+D  MA+RSI+CKTEVGKP VAL CGSLVYYHCA+RNSSLLSLVADVFI
Sbjct: 1   MNQIEGRSESLKDAEMANRSISCKTEVGKPLVALICGSLVYYHCAYRNSSLLSLVADVFI 60

Query: 61  VLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHD 120
           VLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHD
Sbjct: 61  VLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHD 120

Query: 121 KRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAAISPFLRRGNER 180
           KRLFVKV+V LYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISA ISPFLRRGN+ 
Sbjct: 121 KRLFVKVIVSLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAFISPFLRRGNDP 180

Query: 181 TSHQDAI 187
            SHQD+I
Sbjct: 181 ISHQDSI 187

[Close]

BLAST of IVF0017059 vs. NCBI nr
Match: XP_022150304.1 (reticulon-like protein B22 [Momordica charantia])

HSP 1 Score: 301 bits (770), Expect = 9.27e-102
Identity = 156/187 (83.42%), Postives = 170/187 (90.91%), Query Frame = 0


Query: 1   MSQIGGRIEGLRDTPMASRSINCKTEVGKPFVALTCGSLVYYHCAFRNSSLLSLVADVFI 60
           MSQIG R E    + MA+R+I+  T++GKP VAL CGSLVYYHCAFRNSSLLSLVADVFI
Sbjct: 2   MSQIGRRSE----SEMANRTIHSTTQLGKPMVALICGSLVYYHCAFRNSSLLSLVADVFI 61

Query: 61  VLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHD 120
           VLLCSLAILGLLFRHMN+SVPVDPLEWQISQDTAN ++AWLANTIGAAESVLRVAATGHD
Sbjct: 62  VLLCSLAILGLLFRHMNISVPVDPLEWQISQDTANGLVAWLANTIGAAESVLRVAATGHD 121

Query: 121 KRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAAISPFLRRGNER 180
           KRLF+KVVVCLYALSVLGRLVSGVTVAYTGLCMLC+YMVLENSES S ++ PF RRGN+ 
Sbjct: 122 KRLFLKVVVCLYALSVLGRLVSGVTVAYTGLCMLCVYMVLENSESTSGSVFPFSRRGNDP 181

Query: 181 TSHQDAI 187
           TSHQDAI
Sbjct: 182 TSHQDAI 184

[Close]

BLAST of IVF0017059 vs. TAIR 10
Match: AT1G78895.1 (Reticulon family protein )

HSP 1 Score: 213.8 bits (543), Expect = 1.2e-55
Identity = 110/161 (68.32%), Postives = 134/161 (83.23%), Query Frame = 0


Query: 26  EVGKPFVALTCGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPL 85
           E+GK    L  G+LVYYHCA+RN++LLSL +DVFIVLLCSLAILGLLFR +NVSVPVDPL
Sbjct: 3   EMGKAMGLLISGTLVYYHCAYRNATLLSLFSDVFIVLLCSLAILGLLFRQLNVSVPVDPL 62

Query: 86  EWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVT 145
           EWQISQDTA++++A LANT+GAAE VLRVAATGHDKRLFVKVV+CLY LS LGRL+SGVT
Sbjct: 63  EWQISQDTASNIVARLANTVGAAEGVLRVAATGHDKRLFVKVVICLYFLSALGRLISGVT 122

Query: 146 VAYTGLCMLCIYMVLENSESISAAISPFLRRGNERTSHQDA 187
           VAY GLC+ C+ M+ + S+S+   +   L+RGN +   Q+A
Sbjct: 123 VAYAGLCLFCLSMLCQTSQSLGNCV---LKRGNGQILEQEA 160

[Close]

BLAST of IVF0017059 vs. TAIR 10
Match: AT1G16825.1 (Reticulon family protein )

HSP 1 Score: 196.4 bits (498), Expect = 2.0e-50
Identity = 99/138 (71.74%), Postives = 120/138 (86.96%), Query Frame = 0


Query: 26  EVGKPFVALTCGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPL 85
           E+GK    L  G+LVY+HCA RN++LLSL++DV IVLL SLAILGLLFRH+NVSVPVDPL
Sbjct: 3   EMGKAIGLLISGTLVYHHCANRNATLLSLISDVLIVLLSSLAILGLLFRHLNVSVPVDPL 62

Query: 86  EWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVT 145
           EWQISQDTA +++A LANT+GAAESVLRVAATGHDKRLFVKVV+CLY L+ LGR++SGVT
Sbjct: 63  EWQISQDTACNIVARLANTVGAAESVLRVAATGHDKRLFVKVVICLYFLAALGRIISGVT 122

Query: 146 VAYTGLCMLCIYMVLENS 164
           +AY GLC+ C+ M+  +S
Sbjct: 123 IAYAGLCLFCLSMLFRSS 140

The following BLAST results are available for this feature:

BLAST of IVF0017059 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GWH5	1.7e-54	68.32	Reticulon-like protein B22 OS=Arabidopsis thaliana OX=3702 GN=RTNLB22 PE=2 SV=1	[more]
P0C941	2.8e-49	71.74	Reticulon-like protein B23 OS=Arabidopsis thaliana OX=3702 GN=RTNLB23 PE=2 SV=1	[more]

BLAST of IVF0017059 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CPH6	1.4e-96	100.00	reticulon-like protein B22 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103503325 PE...	[more]
A0A0A0KQM7	1.9e-93	97.33	Reticulon domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G487710 P...	[more]
A0A6J1I734	3.3e-85	89.84	reticulon-like protein B22 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC11147184...	[more]
A0A6J1GJ96	3.3e-85	89.84	reticulon-like protein B22 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111454...	[more]
A0A6J1D9M0	1.7e-78	83.42	reticulon-like protein B22 OS=Momordica charantia OX=3673 GN=LOC111018504 PE=4 S...	[more]

BLAST of IVF0017059 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008465703.1	2.43e-125	100.00	PREDICTED: reticulon-like protein B22 isoform X2 [Cucumis melo]	[more]
XP_011655303.1	3.30e-121	97.33	reticulon-like protein B22 [Cucumis sativus] >KGN51194.1 hypothetical protein Cs...	[more]
XP_038889154.1	2.41e-116	92.51	reticulon-like protein B22 [Benincasa hispida]	[more]
XP_022952032.1	2.12e-110	89.84	reticulon-like protein B22 isoform X1 [Cucurbita moschata] >XP_022973272.1 retic...	[more]
XP_022150304.1	9.27e-102	83.42	reticulon-like protein B22 [Momordica charantia]	[more]

BLAST of IVF0017059 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G78895.1	1.2e-55	68.32	Reticulon family protein	[more]
AT1G16825.1	2.0e-50	71.74	Reticulon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003388	Reticulon	PFAM	PF02453	Reticulon	coord: 32..156 e-value: 2.8E-16 score: 59.9
IPR044177	Reticulon-like protein B22/B23	PANTHER	PTHR47879	RETICULON-LIKE PROTEIN B22	coord: 18..185

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0017059.1	IVF0017059.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0016021	integral component of membrane