IVF0017015 (gene) Melon (IVF77) v1

Overview
NameIVF0017015
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionHistidine-rich glycoprotein-like
Locationchr06: 4107805 .. 4107975 (-)
RNA-Seq ExpressionIVF0017015
SyntenyIVF0017015
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGCAAAGTTGTATCGTTGTTATCTTAGAGAGAGGGAGGCAAAACTGCACCATCATCGTCGTCTTGAAGAGAGGAAGATAAAGTTGTACCATCGATGTCATCTTGGAGAGGTAAAGGTGGAGTTGCACCATCATCGTCCTCTAAGGGCTACAACATATTGGAGATGA

mRNA sequence

ATGGAGGCAAAGTTGTATCGTTGTTATCTTAGAGAGAGGGAGGCAAAACTGCACCATCATCGTCGTCTTGAAGAGAGGAAGATAAAGTTGTACCATCGATGTCATCTTGGAGAGGTAAAGGTGGAGTTGCACCATCATCGTCCTCTAAGGGCTACAACATATTGGAGATGA

Coding sequence (CDS)

ATGGAGGCAAAGTTGTATCGTTGTTATCTTAGAGAGAGGGAGGCAAAACTGCACCATCATCGTCGTCTTGAAGAGAGGAAGATAAAGTTGTACCATCGATGTCATCTTGGAGAGGTAAAGGTGGAGTTGCACCATCATCGTCCTCTAAGGGCTACAACATATTGGAGATGA

Protein sequence

MEAKLYRCYLREREAKLHHHRRLEERKIKLYHRCHLGEVKVELHHHRPLRATTYWR
Homology
[Close]
BLAST of IVF0017015 vs. ExPASy TrEMBL
Match: A0A5D3CD94 (Histidine-rich glycoprotein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold127G001090 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.1e-12
Identity = 40/55 (72.73%), Postives = 44/55 (80.00%), Query Frame = 0 

Query: 2   EAKLYRCYLREREAKLHHHRRLEERKIKLYHRCHLGEVKVELHHHRPLRATTYWR 57
           E KLYRC+LRE EAKLHH+R L ER+ KL+HR HL E K EL HHRPLRATT WR
Sbjct: 222 EEKLYRCHLREEEAKLHHYRHLREREAKLHHRRHLVEAKSELRHHRPLRATTCWR 276

[Close]
BLAST of IVF0017015 vs. ExPASy TrEMBL
Match: A0A5D3C8P6 (Histidine-rich glycoprotein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold105G00230 PE=4 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 2.9e-05
Identity = 31/50 (62.00%), Postives = 38/50 (76.00%), Query Frame = 0 

Query: 2   EAKL-YRCYLREREAKLHHHRRLEERKIKLYHRCHLGEVKVELHHHRPLR 51
           EA+L Y C+LRE EA+LHH   L+ER+ KL+HR H GE +VELHHH  LR
Sbjct: 329 EAELHYYCHLREAEAELHHRHHLKEREAKLHHRYHCGEGEVELHHHCYLR 378

[Close]
BLAST of IVF0017015 vs. ExPASy TrEMBL
Match: A0A5A7U6T5 (Histidine-rich glycoprotein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold13G00350 PE=4 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 2.9e-05
Identity = 31/50 (62.00%), Postives = 38/50 (76.00%), Query Frame = 0 

Query: 2  EAKL-YRCYLREREAKLHHHRRLEERKIKLYHRCHLGEVKVELHHHRPLR 51
          EA+L Y C+LRE EA+LHH   L+ER+ KL+HR H GE +VELHHH  LR
Sbjct: 26 EAELHYYCHLREAEAELHHRHHLKEREAKLHHRYHCGEGEVELHHHCYLR 75

[Close]
BLAST of IVF0017015 vs. ExPASy TrEMBL
Match: A0A1S3B5B4 (histidine-rich glycoprotein-like OS=Cucumis melo OX=3656 GN=LOC103485951 PE=4 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 2.9e-05
Identity = 31/50 (62.00%), Postives = 38/50 (76.00%), Query Frame = 0 

Query: 2  EAKL-YRCYLREREAKLHHHRRLEERKIKLYHRCHLGEVKVELHHHRPLR 51
          EA+L Y C+LRE EA+LHH   L+ER+ KL+HR H GE +VELHHH  LR
Sbjct: 44 EAELHYYCHLREAEAELHHRHHLKEREAKLHHRYHCGEGEVELHHHCYLR 93

[Close]
BLAST of IVF0017015 vs. NCBI nr
Match: TYK09811.1 (histidine-rich glycoprotein-like [Cucumis melo var. makuwa])

HSP 1 Score: 83.6 bits (205), Expect = 1.51e-17
Identity = 40/55 (72.73%), Postives = 44/55 (80.00%), Query Frame = 0 

Query: 2   EAKLYRCYLREREAKLHHHRRLEERKIKLYHRCHLGEVKVELHHHRPLRATTYWR 56
           E KLYRC+LRE EAKLHH+R L ER+ KL+HR HL E K EL HHRPLRATT WR
Sbjct: 222 EEKLYRCHLREEEAKLHHYRHLREREAKLHHRRHLVEAKSELRHHRPLRATTCWR 276

[Close]
BLAST of IVF0017015 vs. NCBI nr
Match: KAA0049886.1 (histidine-rich glycoprotein-like [Cucumis melo var. makuwa])

HSP 1 Score: 58.9 bits (141), Expect = 1.98e-08
Identity = 31/50 (62.00%), Postives = 38/50 (76.00%), Query Frame = 0 

Query: 2  EAKL-YRCYLREREAKLHHHRRLEERKIKLYHRCHLGEVKVELHHHRPLR 50
          EA+L Y C+LRE EA+LHH   L+ER+ KL+HR H GE +VELHHH  LR
Sbjct: 26 EAELHYYCHLREAEAELHHRHHLKEREAKLHHRYHCGEGEVELHHHCYLR 75

[Close]
BLAST of IVF0017015 vs. NCBI nr
Match: XP_008441951.1 (PREDICTED: histidine-rich glycoprotein-like [Cucumis melo])

HSP 1 Score: 58.9 bits (141), Expect = 2.22e-08
Identity = 31/50 (62.00%), Postives = 38/50 (76.00%), Query Frame = 0 

Query: 2  EAKL-YRCYLREREAKLHHHRRLEERKIKLYHRCHLGEVKVELHHHRPLR 50
          EA+L Y C+LRE EA+LHH   L+ER+ KL+HR H GE +VELHHH  LR
Sbjct: 44 EAELHYYCHLREAEAELHHRHHLKEREAKLHHRYHCGEGEVELHHHCYLR 93

[Close]
BLAST of IVF0017015 vs. NCBI nr
Match: TYK07624.1 (histidine-rich glycoprotein-like [Cucumis melo var. makuwa])

HSP 1 Score: 58.9 bits (141), Expect = 2.99e-08
Identity = 31/50 (62.00%), Postives = 38/50 (76.00%), Query Frame = 0 

Query: 2   EAKL-YRCYLREREAKLHHHRRLEERKIKLYHRCHLGEVKVELHHHRPLR 50
           EA+L Y C+LRE EA+LHH   L+ER+ KL+HR H GE +VELHHH  LR
Sbjct: 329 EAELHYYCHLREAEAELHHRHHLKEREAKLHHRYHCGEGEVELHHHCYLR 378

[Close]
BLAST of IVF0017015 vs. NCBI nr
Match: KAA0067432.1 (hypothetical protein E6C27_scaffold40G00950 [Cucumis melo var. makuwa])

HSP 1 Score: 51.2 bits (121), Expect = 8.74e-06
Identity = 31/56 (55.36%), Postives = 34/56 (60.71%), Query Frame = 0 

Query: 1   MEAKLYRCYLREREAKLHHHRRLEERKIKLYHRCHLGEVKVELHHHRPLRATTYWR 56
           MEAKLYR +LRE EAKLHH R             HLGE + EL H   LRATTYW+
Sbjct: 152 MEAKLYRHHLRE-EAKLHHRR-------------HLGEAEAELCHRFRLRATTYWK 193

The following BLAST results are available for this feature:
BLAST of IVF0017015 vs.
Match NameE-valueIdentityDescription
BLAST of IVF0017015 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3CD941.1e-1272.73Histidine-rich glycoprotein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676... [more]
A0A5D3C8P62.9e-0562.00Histidine-rich glycoprotein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676... [more]
A0A5A7U6T52.9e-0562.00Histidine-rich glycoprotein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27... [more]
A0A1S3B5B42.9e-0562.00histidine-rich glycoprotein-like OS=Cucumis melo OX=3656 GN=LOC103485951 PE=4 SV... [more]
BLAST of IVF0017015 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK09811.11.51e-1772.73histidine-rich glycoprotein-like [Cucumis melo var. makuwa][more]
KAA0049886.11.98e-0862.00histidine-rich glycoprotein-like [Cucumis melo var. makuwa][more]
XP_008441951.12.22e-0862.00PREDICTED: histidine-rich glycoprotein-like [Cucumis melo][more]
TYK07624.12.99e-0862.00histidine-rich glycoprotein-like [Cucumis melo var. makuwa][more]
KAA0067432.18.74e-0655.36hypothetical protein E6C27_scaffold40G00950 [Cucumis melo var. makuwa][more]
BLAST of IVF0017015 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0017015.1IVF0017015.1mRNA