IVF0017006 (gene) Melon (IVF77) v1

Overview


Name	IVF0017006
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Anaphase-promoting complex subunit 11
Location	chr01: 7899907 .. 7901415 (+)
RNA-Seq Expression	IVF0017006
Synteny	IVF0017006

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCTTTTGGCTACCAAAGGATTTGATGATGGTATTAATCGTACTTTATTAGAACGAAATTTCTAATGCCAAAAATGGTGGTCGGCTTGGCCTTGCCAAACTCAAAGAGGCCAATATAGATCAAATGGATCCAGATTACCCCAAAAGAGTCTACACACGTACCTGATTTTCATCTGTGCTCCACAAATTGCCATGGCAAACTTTGAAGAAATAGCCCTTGAAAACTTTGTGTTACATGCAAGTCTCTCTTACAGTTTTCTTTGGTTTCAAGATTGGCAGTAGCCATAATATTAGCTTTTATGGAATGACGCTCTTTCCTTATATTTCCCTGCTTTAAGGTAGGAATTCAGAGGTTTTTCATCATCTCTTTCTACCCTGTTGAACTACTCGAACTTTTGCTCTTTCCTTTTCTCACAATTAAGCTTGAATTGGTTATCCATGTCCAACAACTCATGCCATTGTTGAGGTCCTTTTGGGCCACCTCTTTTGGGGCAAGGGAAAGTTTATTCGGAAGTGTAGTCTTGAGTGTTTTGTGGGATGCTTGGGTTAAACCCACAAAATCGTCCAATGAAAAATTTTCCACTTTATAAAATTGGGTCGATTAGTCACTTGAAGTTTCTTACATTGTGTTCTTTTCTGGTACCTCCCTTTTGTACTTTAAATATCTTTTCTCATTGATGTGTTTGGCTTGATTTCTTGTCATGTGCCTTTTTGTATCTCTTTTTTCTTGTCATTTTCTATCAAGTATAATAACATTTGAATTCTGTACCTGTCAGTATGATAGCTTTGTTGGCTGTTGCATAATATTCATCTGCATCAATACATTAGAAAGGATTTCTTTCAAAATTTTAATCTACTATATCTGCAATTAGATTTTCCTTGACTTAGATGCCCTCCATAAACATATGTTCGGGGTTCAAAAAGAGTATGTTCCCACATTTTTTTCCTTATAGTTCCTACCCTTGAGTGAGTATAATTAACTATATTGTTATCCTCCCTTCCGTAAAATATAGGTGGCATGCTGTTGCATCATGGACTTGGAATGCCCAAGATGAAACATGTGGAATTTGTAGGATGGCCTTTGATGGTTGTTGCCCTGATTGCAAGCTCCCTGGAGATGATTGCCCATTGAGTGAGTCAACTTGCATTGTCTTCATATCCTCAAACCTTTTCTTCTACTATCAATCATTGCAACTCATAGTTGATTCGTGTTGTTTAAGATTATACACACACACAAACACATATTAAGAGAGCTCGAAAAACCATCGAATTGGTACTCTACTTAACTACTAATTGAAGGTTGCACCGTGCTTTTGTAAATTCCTTGGTCATTTACTTTTCCTTGAACATGATGGTAATGACCCCTTTATTTTGTTTTTCTTTAAATGCAGTTTGGGGTGCATGCAACCATGCTTTCCATCTTCATTGCATCCTAAAATGGGTGAATTCACAGACTTCTCAGGCTCATTGCCCCATGTGCCGCAGAGAATGGCAATTCAAGGGGTGA

mRNA sequence

ATGTCCTTTTGGCTACCAAAGGATTTGATGATGGTATTAATCATCAAATGGATCCAGATTACCCCAAAAGAGTCTACACACGTACCTGATTTTCATCTGTTTTTCATCATCTCTTTCTACCCTGTTGAACTACTCGAACTTTTGCTCTTTCCTTTTCTCACAATTAAGCTTGAATTGATTTTCCTTGACTTAGATGCCCTCCATAAACATATGTTCGGGGTTCAAAAAGAGTGGCATGCTGTTGCATCATGGACTTGGAATGCCCAAGATGAAACATGTGGAATTTGTAGGATGGCCTTTGATGGTTGTTGCCCTGATTGCAAGCTCCCTGGAGATGATTGCCCATTGATTTGGGGTGCATGCAACCATGCTTTCCATCTTCATTGCATCCTAAAATGGGTGAATTCACAGACTTCTCAGGCTCATTGCCCCATGTGCCGCAGAGAATGGCAATTCAAGGGGTGA

Coding sequence (CDS)

ATGTCCTTTTGGCTACCAAAGGATTTGATGATGGTATTAATCATCAAATGGATCCAGATTACCCCAAAAGAGTCTACACACGTACCTGATTTTCATCTGTTTTTCATCATCTCTTTCTACCCTGTTGAACTACTCGAACTTTTGCTCTTTCCTTTTCTCACAATTAAGCTTGAATTGATTTTCCTTGACTTAGATGCCCTCCATAAACATATGTTCGGGGTTCAAAAAGAGTGGCATGCTGTTGCATCATGGACTTGGAATGCCCAAGATGAAACATGTGGAATTTGTAGGATGGCCTTTGATGGTTGTTGCCCTGATTGCAAGCTCCCTGGAGATGATTGCCCATTGATTTGGGGTGCATGCAACCATGCTTTCCATCTTCATTGCATCCTAAAATGGGTGAATTCACAGACTTCTCAGGCTCATTGCCCCATGTGCCGCAGAGAATGGCAATTCAAGGGGTGA

Protein sequence

MSFWLPKDLMMVLIIKWIQITPKESTHVPDFHLFFIISFYPVELLELLLFPFLTIKLELIFLDLDALHKHMFGVQKEWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKG

Homology

[Close]

BLAST of IVF0017006 vs. ExPASy Swiss-Prot
Match: Q9M9L0 (Anaphase-promoting complex subunit 11 OS=Arabidopsis thaliana OX=3702 GN=APC11 PE=1 SV=3)

HSP 1 Score: 188.0 bits (476), Expect = 8.2e-47
Identity = 75/77 (97.40%), Postives = 77/77 (100.00%), Query Frame = 0


Query: 77  EWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNS 136
           +WHAVASWTW+AQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNS
Sbjct: 7   QWHAVASWTWDAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNS 66

Query: 137 QTSQAHCPMCRREWQFK 154
           QTSQAHCPMCRREWQFK
Sbjct: 67  QTSQAHCPMCRREWQFK 83

[Close]

BLAST of IVF0017006 vs. ExPASy Swiss-Prot
Match: Q3ZCF6 (Anaphase-promoting complex subunit 11 OS=Bos taurus OX=9913 GN=ANAPC11 PE=3 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 2.2e-36
Identity = 56/78 (71.79%), Postives = 67/78 (85.90%), Query Frame = 0


Query: 76  KEWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVN 135
           K W+ VA+W W A DE CGICRMAF+GCCPDCK+PGDDCPL+WG C+H FH+HCILKW+N
Sbjct: 6   KCWNGVATWLWVANDENCGICRMAFNGCCPDCKVPGDDCPLVWGQCSHCFHMHCILKWLN 65

Query: 136 SQTSQAHCPMCRREWQFK 154
           +Q  Q HCPMCR+EW+FK
Sbjct: 66  AQQVQQHCPMCRQEWKFK 83

[Close]

BLAST of IVF0017006 vs. ExPASy Swiss-Prot
Match: Q9CPX9 (Anaphase-promoting complex subunit 11 OS=Mus musculus OX=10090 GN=Anapc11 PE=3 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 2.2e-36
Identity = 56/78 (71.79%), Postives = 67/78 (85.90%), Query Frame = 0


Query: 76  KEWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVN 135
           K W+ VA+W W A DE CGICRMAF+GCCPDCK+PGDDCPL+WG C+H FH+HCILKW+N
Sbjct: 6   KCWNGVATWLWVANDENCGICRMAFNGCCPDCKVPGDDCPLVWGQCSHCFHMHCILKWLN 65

Query: 136 SQTSQAHCPMCRREWQFK 154
           +Q  Q HCPMCR+EW+FK
Sbjct: 66  AQQVQQHCPMCRQEWKFK 83

[Close]

BLAST of IVF0017006 vs. ExPASy Swiss-Prot
Match: Q9NYG5 (Anaphase-promoting complex subunit 11 OS=Homo sapiens OX=9606 GN=ANAPC11 PE=1 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 8.5e-36
Identity = 55/78 (70.51%), Postives = 67/78 (85.90%), Query Frame = 0


Query: 76  KEWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVN 135
           K W+ VA+W W A DE CGICRMAF+GCCPDCK+PGDDCPL+WG C+H FH+HCILKW++
Sbjct: 6   KCWNGVATWLWVANDENCGICRMAFNGCCPDCKVPGDDCPLVWGQCSHCFHMHCILKWLH 65

Query: 136 SQTSQAHCPMCRREWQFK 154
           +Q  Q HCPMCR+EW+FK
Sbjct: 66  AQQVQQHCPMCRQEWKFK 83

[Close]

BLAST of IVF0017006 vs. ExPASy Swiss-Prot
Match: Q5R8A2 (Anaphase-promoting complex subunit 11 OS=Pongo abelii OX=9601 GN=ANAPC11 PE=3 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 8.5e-36
Identity = 55/78 (70.51%), Postives = 67/78 (85.90%), Query Frame = 0


Query: 76  KEWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVN 135
           K W+ VA+W W A DE CGICRMAF+GCCPDCK+PGDDCPL+WG C+H FH+HCILKW++
Sbjct: 6   KCWNGVATWLWVANDENCGICRMAFNGCCPDCKVPGDDCPLVWGQCSHCFHMHCILKWLH 65

Query: 136 SQTSQAHCPMCRREWQFK 154
           +Q  Q HCPMCR+EW+FK
Sbjct: 66  AQQVQQHCPMCRQEWKFK 83

[Close]

BLAST of IVF0017006 vs. ExPASy TrEMBL
Match: A0A0A0K9J6 (Anaphase-promoting complex subunit 11 OS=Cucumis sativus OX=3659 GN=Csa_7G306890 PE=4 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 9.4e-62
Identity = 116/149 (77.85%), Postives = 121/149 (81.21%), Query Frame = 0


Query: 23  KESTHVPDFHLF----FIISFYPVELLELLL-------------FPFLTIKLELIFLDLD 82
           KESTHVPDFH +    F + FYPVELLELLL             +P  T  ++ IFLDLD
Sbjct: 48  KESTHVPDFHPWNSEVFNLLFYPVELLELLLSSSQFSQLSLNWCYPCPTQAIDEIFLDLD 107

Query: 83  ALHKHMFGVQKEWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAF 142
           AL K MFGV KEWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAF
Sbjct: 108 ALRKRMFGVWKEWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAF 167

Query: 143 HLHCILKWVNSQTSQAHCPMCRREWQFKG 155
           HLHCILKWVNSQTSQAHCPMCRREWQFKG
Sbjct: 168 HLHCILKWVNSQTSQAHCPMCRREWQFKG 196

[Close]

BLAST of IVF0017006 vs. ExPASy TrEMBL
Match: A0A1S3CFQ1 (Anaphase-promoting complex subunit 11 OS=Cucumis melo OX=3656 GN=LOC103500407 PE=4 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 1.1e-49
Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0


Query: 71  MFGVQKEWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCI 130
           MFGVQKEWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCI
Sbjct: 1   MFGVQKEWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCI 60

Query: 131 LKWVNSQTSQAHCPMCRREWQFKG 155
           LKWVNSQTSQAHCPMCRREWQFKG
Sbjct: 61  LKWVNSQTSQAHCPMCRREWQFKG 84

[Close]

BLAST of IVF0017006 vs. ExPASy TrEMBL
Match: A0A2I4HDU7 (Anaphase-promoting complex subunit 11 OS=Juglans regia OX=51240 GN=LOC109016305 PE=4 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 8.5e-47
Identity = 80/88 (90.91%), Postives = 83/88 (94.32%), Query Frame = 0


Query: 66  ALHKHMFGVQKEWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAF 125
           AL +H+   Q EWHAVASWTW+AQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAF
Sbjct: 18  ALTEHLLRSQTEWHAVASWTWDAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAF 77

Query: 126 HLHCILKWVNSQTSQAHCPMCRREWQFK 154
           HLHCILKWVNSQTSQAHCPMCRREWQFK
Sbjct: 78  HLHCILKWVNSQTSQAHCPMCRREWQFK 105

[Close]

BLAST of IVF0017006 vs. ExPASy TrEMBL
Match: A0A1U8B5H0 (Anaphase-promoting complex subunit 11 OS=Nelumbo nucifera OX=4432 GN=LOC104607187 PE=4 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 1.1e-46
Identity = 77/86 (89.53%), Postives = 83/86 (96.51%), Query Frame = 0


Query: 69  KHMFGVQKEWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLH 128
           +H+ G+  EWHA+ASWTW+AQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNH+FHLH
Sbjct: 7   RHLGGLLSEWHAIASWTWDAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHSFHLH 66

Query: 129 CILKWVNSQTSQAHCPMCRREWQFKG 155
           CILKWVNSQTSQAHCPMCRREWQFKG
Sbjct: 67  CILKWVNSQTSQAHCPMCRREWQFKG 92

[Close]

BLAST of IVF0017006 vs. ExPASy TrEMBL
Match: A0A6J1CPX8 (Anaphase-promoting complex subunit 11 OS=Momordica charantia OX=3673 GN=LOC111013505 PE=4 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 3.2e-46
Identity = 91/128 (71.09%), Postives = 97/128 (75.78%), Query Frame = 0


Query: 38  SFYPVELLELLLFPFLTIKLELIFLDLDALHKHMFG-----------VQKEWHAVASWTW 97
           S+  V LL L+     ++K  ++   LD   KH  G            QKEWHAVASWTW
Sbjct: 40  SYVWVPLLGLVFGVEPSLKGSIVVFALD--WKHCLGFLGGDESKNITAQKEWHAVASWTW 99

Query: 98  NAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMC 155
           NAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMC
Sbjct: 100 NAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMC 159

[Close]

BLAST of IVF0017006 vs. NCBI nr
Match: KGN44481.1 (hypothetical protein Csa_016037 [Cucumis sativus])

HSP 1 Score: 244 bits (622), Expect = 1.29e-79
Identity = 116/149 (77.85%), Postives = 121/149 (81.21%), Query Frame = 0


Query: 23  KESTHVPDFHLF----FIISFYPVELLELLL-------------FPFLTIKLELIFLDLD 82
           KESTHVPDFH +    F + FYPVELLELLL             +P  T  ++ IFLDLD
Sbjct: 48  KESTHVPDFHPWNSEVFNLLFYPVELLELLLSSSQFSQLSLNWCYPCPTQAIDEIFLDLD 107

Query: 83  ALHKHMFGVQKEWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAF 142
           AL K MFGV KEWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAF
Sbjct: 108 ALRKRMFGVWKEWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAF 167

Query: 143 HLHCILKWVNSQTSQAHCPMCRREWQFKG 154
           HLHCILKWVNSQTSQAHCPMCRREWQFKG
Sbjct: 168 HLHCILKWVNSQTSQAHCPMCRREWQFKG 196

[Close]

BLAST of IVF0017006 vs. NCBI nr
Match: XP_008461919.1 (PREDICTED: anaphase-promoting complex subunit 11 [Cucumis melo] >XP_016902787.1 PREDICTED: anaphase-promoting complex subunit 11 [Cucumis melo] >XP_016902788.1 PREDICTED: anaphase-promoting complex subunit 11 [Cucumis melo] >XP_016902789.1 PREDICTED: anaphase-promoting complex subunit 11 [Cucumis melo])

HSP 1 Score: 204 bits (518), Expect = 2.31e-65
Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0


Query: 71  MFGVQKEWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCI 130
           MFGVQKEWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCI
Sbjct: 1   MFGVQKEWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCI 60

Query: 131 LKWVNSQTSQAHCPMCRREWQFKG 154
           LKWVNSQTSQAHCPMCRREWQFKG
Sbjct: 61  LKWVNSQTSQAHCPMCRREWQFKG 84

[Close]

BLAST of IVF0017006 vs. NCBI nr
Match: XP_011659120.1 (anaphase-promoting complex subunit 11 [Cucumis sativus])

HSP 1 Score: 201 bits (511), Expect = 2.69e-64
Identity = 83/84 (98.81%), Postives = 83/84 (98.81%), Query Frame = 0


Query: 71  MFGVQKEWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCI 130
           MFGV KEWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCI
Sbjct: 1   MFGVWKEWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCI 60

Query: 131 LKWVNSQTSQAHCPMCRREWQFKG 154
           LKWVNSQTSQAHCPMCRREWQFKG
Sbjct: 61  LKWVNSQTSQAHCPMCRREWQFKG 84

[Close]

BLAST of IVF0017006 vs. NCBI nr
Match: XP_040994159.1 (anaphase-promoting complex subunit 11 isoform X3 [Juglans microcarpa x Juglans regia])

HSP 1 Score: 194 bits (494), Expect = 2.08e-61
Identity = 80/89 (89.89%), Postives = 83/89 (93.26%), Query Frame = 0


Query: 65  DALHKHMFGVQKEWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHA 124
            AL +H+   Q EWHAVASWTW+AQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHA
Sbjct: 17  QALTEHLLRSQTEWHAVASWTWDAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHA 76

Query: 125 FHLHCILKWVNSQTSQAHCPMCRREWQFK 153
           FHLHCILKWVNSQTSQAHCPMCRREWQFK
Sbjct: 77  FHLHCILKWVNSQTSQAHCPMCRREWQFK 105

[Close]

BLAST of IVF0017006 vs. NCBI nr
Match: XP_018840192.1 (anaphase-promoting complex subunit 11 isoform X2 [Juglans regia] >XP_018854272.1 anaphase-promoting complex subunit 11 isoform X2 [Juglans regia])

HSP 1 Score: 194 bits (494), Expect = 2.08e-61
Identity = 80/89 (89.89%), Postives = 83/89 (93.26%), Query Frame = 0


Query: 65  DALHKHMFGVQKEWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHA 124
            AL +H+   Q EWHAVASWTW+AQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHA
Sbjct: 17  QALTEHLLRSQTEWHAVASWTWDAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHA 76

Query: 125 FHLHCILKWVNSQTSQAHCPMCRREWQFK 153
           FHLHCILKWVNSQTSQAHCPMCRREWQFK
Sbjct: 77  FHLHCILKWVNSQTSQAHCPMCRREWQFK 105

[Close]

BLAST of IVF0017006 vs. TAIR 10
Match: AT3G05870.1 (anaphase-promoting complex/cyclosome 11 )

HSP 1 Score: 187.2 bits (474), Expect = 9.9e-48
Identity = 75/76 (98.68%), Postives = 76/76 (100.00%), Query Frame = 0


Query: 78  WHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQ 137
           WHAVASWTW+AQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQ
Sbjct: 11  WHAVASWTWDAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQ 70

Query: 138 TSQAHCPMCRREWQFK 154
           TSQAHCPMCRREWQFK
Sbjct: 71  TSQAHCPMCRREWQFK 86

[Close]

BLAST of IVF0017006 vs. TAIR 10
Match: AT3G05870.2 (anaphase-promoting complex/cyclosome 11 )

HSP 1 Score: 187.2 bits (474), Expect = 9.9e-48
Identity = 75/76 (98.68%), Postives = 76/76 (100.00%), Query Frame = 0


Query: 78  WHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQ 137
           WHAVASWTW+AQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQ
Sbjct: 11  WHAVASWTWDAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQ 70

Query: 138 TSQAHCPMCRREWQFK 154
           TSQAHCPMCRREWQFK
Sbjct: 71  TSQAHCPMCRREWQFK 86

[Close]

BLAST of IVF0017006 vs. TAIR 10
Match: AT5G20570.1 (RING-box 1 )

HSP 1 Score: 79.3 bits (194), Expect = 2.9e-15
Identity = 33/83 (39.76%), Postives = 47/83 (56.63%), Query Frame = 0


Query: 76  KEWHAVASWTWNAQDETCGICRMAFDGCCPDCK-----LPGDDCPLIWGACNHAFHLHCI 135
           K+W AVA W W+   + C ICR      C +C+        ++C + WG CNHAFH HCI
Sbjct: 35  KKWSAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCI 94

Query: 136 LKWVNSQTSQAHCPMCRREWQFK 154
            +W+  +T Q  CP+   EW+F+
Sbjct: 95  SRWL--KTRQV-CPLDNSEWEFQ 114

[Close]

BLAST of IVF0017006 vs. TAIR 10
Match: AT3G42830.1 (RING/U-box superfamily protein )

HSP 1 Score: 77.0 bits (188), Expect = 1.4e-14
Identity = 33/83 (39.76%), Postives = 46/83 (55.42%), Query Frame = 0


Query: 76  KEWHAVASWTWNAQDETCGICRMAFDGCCPDC-----KLPGDDCPLIWGACNHAFHLHCI 135
           K+W AVA W W+   + C ICR      C +C         ++C + WG CNHAFH HCI
Sbjct: 32  KKWSAVALWAWDIVVDNCAICRNHIMDLCIECLANQASATSEECTVAWGVCNHAFHFHCI 91

Query: 136 LKWVNSQTSQAHCPMCRREWQFK 154
            +W+  +T Q  CP+   EW+F+
Sbjct: 92  SRWL--KTRQV-CPLDVCEWEFQ 111

[Close]

BLAST of IVF0017006 vs. TAIR 10
Match: AT5G20570.3 (RING-box 1 )

HSP 1 Score: 69.3 bits (168), Expect = 3.0e-12
Identity = 33/101 (32.67%), Postives = 47/101 (46.53%), Query Frame = 0


Query: 76  KEWHAVASWTWNAQD------------------ETCGICRMAFDGCCPDCK-----LPGD 135
           K+W AVA W W   +                  + C ICR      C +C+        +
Sbjct: 35  KKWSAVALWAWGNLENPYTLSSIGLSMFRYIVVDNCAICRNHIMDLCIECQANQASATSE 94

Query: 136 DCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFK 154
           +C + WG CNHAFH HCI +W+  +T Q  CP+   EW+F+
Sbjct: 95  ECTVAWGVCNHAFHFHCISRWL--KTRQV-CPLDNSEWEFQ 132

The following BLAST results are available for this feature:

BLAST of IVF0017006 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M9L0	8.2e-47	97.40	Anaphase-promoting complex subunit 11 OS=Arabidopsis thaliana OX=3702 GN=APC11 P...	[more]
Q3ZCF6	2.2e-36	71.79	Anaphase-promoting complex subunit 11 OS=Bos taurus OX=9913 GN=ANAPC11 PE=3 SV=1	[more]
Q9CPX9	2.2e-36	71.79	Anaphase-promoting complex subunit 11 OS=Mus musculus OX=10090 GN=Anapc11 PE=3 S...	[more]
Q9NYG5	8.5e-36	70.51	Anaphase-promoting complex subunit 11 OS=Homo sapiens OX=9606 GN=ANAPC11 PE=1 SV...	[more]
Q5R8A2	8.5e-36	70.51	Anaphase-promoting complex subunit 11 OS=Pongo abelii OX=9601 GN=ANAPC11 PE=3 SV...	[more]

BLAST of IVF0017006 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K9J6	9.4e-62	77.85	Anaphase-promoting complex subunit 11 OS=Cucumis sativus OX=3659 GN=Csa_7G306890...	[more]
A0A1S3CFQ1	1.1e-49	100.00	Anaphase-promoting complex subunit 11 OS=Cucumis melo OX=3656 GN=LOC103500407 PE...	[more]
A0A2I4HDU7	8.5e-47	90.91	Anaphase-promoting complex subunit 11 OS=Juglans regia OX=51240 GN=LOC109016305 ...	[more]
A0A1U8B5H0	1.1e-46	89.53	Anaphase-promoting complex subunit 11 OS=Nelumbo nucifera OX=4432 GN=LOC10460718...	[more]
A0A6J1CPX8	3.2e-46	71.09	Anaphase-promoting complex subunit 11 OS=Momordica charantia OX=3673 GN=LOC11101...	[more]

BLAST of IVF0017006 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN44481.1	1.29e-79	77.85	hypothetical protein Csa_016037 [Cucumis sativus]	[more]
XP_008461919.1	2.31e-65	100.00	PREDICTED: anaphase-promoting complex subunit 11 [Cucumis melo] >XP_016902787.1 ...	[more]
XP_011659120.1	2.69e-64	98.81	anaphase-promoting complex subunit 11 [Cucumis sativus]	[more]
XP_040994159.1	2.08e-61	89.89	anaphase-promoting complex subunit 11 isoform X3 [Juglans microcarpa x Juglans r...	[more]
XP_018840192.1	2.08e-61	89.89	anaphase-promoting complex subunit 11 isoform X2 [Juglans regia] >XP_018854272.1...	[more]

BLAST of IVF0017006 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G05870.1	9.9e-48	98.68	anaphase-promoting complex/cyclosome 11	[more]
AT3G05870.2	9.9e-48	98.68	anaphase-promoting complex/cyclosome 11	[more]
AT5G20570.1	2.9e-15	39.76	RING-box 1	[more]
AT3G42830.1	1.4e-14	39.76	RING/U-box superfamily protein	[more]
AT5G20570.3	3.0e-12	32.67	RING-box 1	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR024991	Anaphase-promoting complex subunit 11, RING-H2 finger	PFAM	PF12861	zf-ANAPC11	coord: 76..153 e-value: 2.1E-38 score: 130.2
IPR024991	Anaphase-promoting complex subunit 11, RING-H2 finger	CDD	cd16456	RING-H2_APC11	coord: 90..152 e-value: 2.42276E-41 score: 130.471
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 65..154 e-value: 1.0E-26 score: 95.0
None	No IPR available	PANTHER	PTHR11210:SF1	ANAPHASE-PROMOTING COMPLEX SUBUNIT 11	coord: 76..153
None	No IPR available	PANTHER	PTHR11210	RING BOX	coord: 76..153
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 76..153
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 104..147 score: 10.984472

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0017006.2	IVF0017006.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0031145	anaphase-promoting complex-dependent catabolic process
biological_process	GO:0051301	cell division
biological_process	GO:0045842	positive regulation of mitotic metaphase/anaphase transition
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0005680	anaphase-promoting complex
molecular_function	GO:0097602	cullin family protein binding
molecular_function	GO:0061630	ubiquitin protein ligase activity
molecular_function	GO:0008270	zinc ion binding