IVF0016975 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACATATTGCGATGACGTTGATAACGTGGACGAGGGGGACTCCACGTACGCAACGACCATCGCTACAGAAGACATACACTACATTAAGACGACAAACGAGTGGTCTCAGTGGCACGACGAACTAATTGAATCGATGTTCACAGATTGGCAGTTGCGTAACGCTTAG ATGACATATTGCGATGACGTTGATAACGTGGACGAGGGGGACTCCACGTACGCAACGACCATCGCTACAGAAGACATACACTACATTAAGACGACAAACGAGTGGTCTCAGTGGCACGACGAACTAATTGAATCGATGTTCACAGATTGGCAGTTGCGTAACGCTTAG ATGACATATTGCGATGACGTTGATAACGTGGACGAGGGGGACTCCACGTACGCAACGACCATCGCTACAGAAGACATACACTACATTAAGACGACAAACGAGTGGTCTCAGTGGCACGACGAACTAATTGAATCGATGTTCACAGATTGGCAGTTGCGTAACGCTTAG MTYCDDVDNVDEGDSTYATTIATEDIHYIKTTNEWSQWHDELIESMFTDWQLRNA Homology
BLAST of IVF0016975 vs. ExPASy TrEMBL
Match: A0A5D3DG14 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold523G00260 PE=4 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 2.1e-24 Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 0
BLAST of IVF0016975 vs. ExPASy TrEMBL
Match: A0A5A7VDR4 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold827G00940 PE=3 SV=1) HSP 1 Score: 108.2 bits (269), Expect = 1.1e-20 Identity = 47/55 (85.45%), Postives = 54/55 (98.18%), Query Frame = 0
BLAST of IVF0016975 vs. ExPASy TrEMBL
Match: A0A5D3BAK8 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold19391G00020 PE=3 SV=1) HSP 1 Score: 108.2 bits (269), Expect = 1.1e-20 Identity = 47/55 (85.45%), Postives = 54/55 (98.18%), Query Frame = 0
BLAST of IVF0016975 vs. ExPASy TrEMBL
Match: A0A5D3CUG9 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold363G00180 PE=3 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 1.4e-20 Identity = 49/55 (89.09%), Postives = 52/55 (94.55%), Query Frame = 0
BLAST of IVF0016975 vs. ExPASy TrEMBL
Match: A0A5A7TW41 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold754G00210 PE=3 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 1.4e-20 Identity = 49/55 (89.09%), Postives = 52/55 (94.55%), Query Frame = 0
BLAST of IVF0016975 vs. NCBI nr
Match: KAA0062745.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK22544.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 120 bits (300), Expect = 5.81e-33 Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 0
BLAST of IVF0016975 vs. NCBI nr
Match: KAA0054051.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYJ96871.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 105 bits (263), Expect = 1.47e-28 Identity = 47/55 (85.45%), Postives = 51/55 (92.73%), Query Frame = 0
BLAST of IVF0016975 vs. NCBI nr
Match: TYJ95515.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 107 bits (268), Expect = 7.09e-27 Identity = 47/55 (85.45%), Postives = 54/55 (98.18%), Query Frame = 0
BLAST of IVF0016975 vs. NCBI nr
Match: KAA0038315.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 103 bits (257), Expect = 1.48e-26 Identity = 45/55 (81.82%), Postives = 53/55 (96.36%), Query Frame = 0
BLAST of IVF0016975 vs. NCBI nr
Match: TYK14046.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 107 bits (267), Expect = 2.17e-26 Identity = 49/55 (89.09%), Postives = 52/55 (94.55%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|