IVF0016973 (gene) Melon (IVF77) v1

Overview
NameIVF0016973
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionchloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic
Locationchr06: 10619714 .. 10623521 (-)
RNA-Seq ExpressionIVF0016973
SyntenyIVF0016973
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTAAAATTTGATTGAAGCGATTTGGGTTCTATGTGGGGTTCTACGTTCTATCCAAACAACCAAGAAAACCCCCTTCTTCTTCCTCATCAGGGAGGTTCTTCATTTTCTTCTACGGCTTTAACAACATCCTCCACTTCTTCTGCTCCAAAATCCACTCTTCTTTTTACTAAACCATCCAATTTACACGCAGGTTCAGTATTTTATTTCCTTCTTCTTCTTCTTCTTCGCTTTCCTAAATTTTGCTTTCGCTTTTTCTTTCTTCTCGGTTTTCCCCGTTGAAGTTCAACGAAACAACATTGTTCTTCATGGGTTTTCTTTTTCCTGCTTTAGGTTTCAATGTTATATGCAGCATCCTTCCAAAGTGTTTCCTTATTTTCTAATTCGAGTACTGCTCATTACCATTCTCCTTCCACAAAGCCTCTAGTCTCTACAAGGCTGTCCGTACGAGCTTCATTGCCTGATAGTGATAATAATAATGGCGTTAAAGTGGAGTATACTCCTTGGCTTATTGTTGGACTGGGTAACCCAGGAAACAAGTATCATGGGACTCGGCACAATGTAATCAGACATTCTTTAACTCTGTGTACTGAACTTTTAGAATGAGTTTGGATGGAATTTTCATAGTGTAGTAGTACTCTTAAATCAATCAAATTTCCTATCTAGTGCTTTCTATGAAGTGTTCCAAACTCACCCTTAACGCGCAATGACACTAAATAACATTGGTCTTTTTGGCCTCTTGGGTTTAATTGTTCAGGTTGGTTTTGAAATGATTGATAGCATTGCTCAAGCGCAGGGAATTTTGATGAACACAATACAATCCAAAGCTCTAATTGGAATAGGTTGGCTTGTTTTCCCCTTCTATGTTATTGAATTGGGTTTCCATGTTACGTGGATTTGAAGTTCATTATGTTTCTTGAATAATCAGTACAGGTTCAATTGGAGAAGTACCAATTTTGTTGGCAAAGCCTCAGACTTACATGAATTTCTGTGGAGAATCGGTTTGTCTTCTCGTCTCTCTTTTCTTCTGTTGTTCAATAAGCATGGCAGAAAGCATACAGTTGAATGATGGTTTGTTTATTTCTGAAGTGTATGGATCCAAAGCTTAGTTTGAAGTAAAATATAAGAAGCTCACTGAGCTCCTTGTATGACCTTATATTCATATGGACAGATTGTTAGTCTTTTTTCCATTTGAAACAATGACATAGCATTAATGTCGCATTTAGATAAGTATATGGACAGGGGTTCTGTGTGTTTGGATATTTTTTACGCCTTTAGATGTTCTACTTAACCTTTAATTTTGTCTGAGTGTGATTGTTATGGAGTCATTTATCTGCACTTTGAACGATTTGTTTGAAATGTGTTAAAATACTCAAATTACTAATGGTTTTGGAGGTTTCAGAACAGCTATGATAATAGTCATAAAAATGACATAATTCCCTTTTCAGTCCCATTAGTCAAGGTTTTCTTAATGAGCAAAGCATTTGTTCGAGAGATAAGAGATGTAAACTGTTAGAAATAAAAGAGGAGGGGGAAGAGAGAGAGAGAGGCCCAAAGATAACTGTGGTTTGCTCAAAGTGAACTAAACCTTTGATTGGATAGGTTTCATTGTGATGATGGCCTGAAGATACTTAGATTTTGAATTTTTCTAACCTTACTGGTTACATATACTAGAAAACTCAGCTGATTCATGTATTAGATTTTGGATAAGGCTATAGTATTGTAATTCCTACCACATCTGGCTGTATTTATCTGCACCACTTTGTAGGTATGCACTCTATAGCATTTTGTGGTAGAGATTTGTTGTTCCGTAGCTAAGGATAAAAACAAATTCGTTGAGGAAGCCATTGTGATTGAACTATGAAGTGGTTATTGTTGCCATCTATGAATAATTTACATGATTTTATTAGATTCATGGGGTTCCATCTCAAAATCAATCGGTAATGAGAGAAGTAGTTCATTTATTTTATAAATGTTGCGAGTGTCCCTTGACTTGTTGAATGCAGGATCCTCAAGATGTCCCCTCAAGATGAATCTTTGGATTCACCATTCATAAATTGGATTCAATGTTTTGTTTTTTGGATCGAATATTGAATGCTCGTTTGGGTAAATAAGCTACGATAGTCTATTAGATACATGAAATTTCATCACAAAACCAATTGGCAATGTAATGAGTTGTCAATCTCAATATCTTAAGAACCCTGCATATGGATGTTTTGTTATACAGCTGCTAATGCTATGAATCTTTCCTTCATCAGTTGAATTATTTTGTCATAATAACGAGATAGTTGTTCCCTTCACATCACTTTATAGGTTGGACCTCTTGCTGCACATTACCAAATACCTTTACGGCACATCTTGTTGGTATAATTTGCAATATCTCTTAGTAATTCTTATTTGTTACCTTACAAAATGACTAGATTGAAATGGAATTCTGTACATGCTTACCATTGTAGACATACGATGAAATGAGCTTGCCAAATGGCGTTCTTAGGCTGCAGCCAAAAGGAGGACATGGCCATCATAATGGGTATGTTTATTTAATATTATTTAATTTCGGTTTCACTTTTATTTTTGTTCTAGTTTTAATTGGTACCTCATACTTTCAATTTTTCTAACCTTCTTATGGACCTATGGTAATGTTTGGAAGTACTTTTTATGTCACCACAAGTGCTTCGCACTTAAAACATCATGCTTGAGAGTAACATAGAAGTACATTAGGAAAATGTCAGAAGTATATAAAGTGCTTCACGAAAAAGTTTCTACAGAGTGCTTTTGGCCCAATTGCTAGACCAGCAAGCACACTTGACAACAAATTTAAAAGTGTAGAACTAAAAATAAAATTAGTTTGTAAATTAGCACTGCTGAAGGCCTTATAATTAAAATATCTTCTTTAAAAGCACTCTCAAACATCTTTTAGTATAAGCACCTTGCTGTATTGTATATTCTATTGGGGCATGTGTTGGAAATTCTTTAACAAGCTTATTAAGTCATTTAGAAAATTGAAGCTCAATGGACTATTTCTTGTTGAATACCCAACAACTTCCCACTGAAGACTTGATGAATATGTTTCATATTAGCATTTTATAGTTGATTTGATCGAACATGCATTTTTCTTCGCTTATTCGCCATTCAAGTGGGAAGTTGTGTTCCTCTCTTATTTGTCATTTTATAGTCGAGAAATTTATGGCAGCATGTGCATAAAAAGTTATTGATTATATTTGTTATACAGGGTGAAGAGTGTAATGGGACACCTGGATGGTCGACGTGAGTTTCCTCGGCTATGTATTGGTATGCATCTCTGTTAACATTAGTTTGAAAACATTCATCAAGTTTCTACTTCAGGAAGTGTAAACAATGACATTGCTCTTGTTATTACTATATCTAGGAATTGGAAACCCACCTGGGACTATGGACATGAAAGCTTTTCTCCTGCAGAAGTTCAGTTCGGTTGAGCGAAAACAGGTGAGACTGCCTTTGCATTCTTATACAGTTCCTCTCTGCATTACTTCATACATCACAGCCTTACTTGATGACTTCGAAACTGTACTTGCCTGGTGGTAGAACTCTATTGCTTAGTGCATTTTCTTTTTACTTTTGTTTGTGCACCCCAACAGATCGATGCAGCTCTTGAACAAGGGGTTGAGGCAGTGAGAACCCTTGCACTGAATGGATTTAGCCAAAGAGTAAACAGATTCAATTTGTCCCAGAAATACAAGTATCATAAGGTTTGATCATCAGGAAAAGAAAGTTGTAGTTTTGATCATATGAGTAAGTGATAATGAACTCTGATAAAAATGAAGTGTAGGAC

mRNA sequence

TTAAAATTTGATTGAAGCGATTTGGGTTCTATGTGGGGTTCTACGTTCTATCCAAACAACCAAGAAAACCCCCTTCTTCTTCCTCATCAGGGAGGTTCTTCATTTTCTTCTACGGCTTTAACAACATCCTCCACTTCTTCTGCTCCAAAATCCACTCTTCTTTTTACTAAACCATCCAATTTACACGCAGGTTTCAATGTTATATGCAGCATCCTTCCAAAGTGTTTCCTTATTTTCTAATTCGAGTACTGCTCATTACCATTCTCCTTCCACAAAGCCTCTAGTCTCTACAAGGCTGTCCGTACGAGCTTCATTGCCTGATAGTGATAATAATAATGGCGTTAAAGTGGAGTATACTCCTTGGCTTATTGTTGGACTGGGTAACCCAGGAAACAAGTATCATGGGACTCGGCACAATGTTGGTTTTGAAATGATTGATAGCATTGCTCAAGCGCAGGGAATTTTGATGAACACAATACAATCCAAAGCTCTAATTGGAATAGGTTCAATTGGAGAAGTACCAATTTTGTTGGCAAAGCCTCAGACTTACATGAATTTCTGTGGAGAATCGGTTGGACCTCTTGCTGCACATTACCAAATACCTTTACGGCACATCTTGTTGACATACGATGAAATGAGCTTGCCAAATGGCGTTCTTAGGCTGCAGCCAAAAGGAGGACATGGCCATCATAATGGGGTGAAGAGTGTAATGGGACACCTGGATGGTCGACGTGAGTTTCCTCGGCTATGTATTGGAATTGGAAACCCACCTGGGACTATGGACATGAAAGCTTTTCTCCTGCAGAAGTTCAGTTCGGTTGAGCGAAAACAGATCGATGCAGCTCTTGAACAAGGGGTTGAGGCAGTGAGAACCCTTGCACTGAATGGATTTAGCCAAAGAGTAAACAGATTCAATTTGTCCCAGAAATACAAGTATCATAAGGTTTGATCATCAGGAAAAGAAAGTTGTAGTTTTGATCATATGAGTAAGTGATAATGAACTCTGATAAAAATGAAGTGTAGGAC

Coding sequence (CDS)

ATGTTATATGCAGCATCCTTCCAAAGTGTTTCCTTATTTTCTAATTCGAGTACTGCTCATTACCATTCTCCTTCCACAAAGCCTCTAGTCTCTACAAGGCTGTCCGTACGAGCTTCATTGCCTGATAGTGATAATAATAATGGCGTTAAAGTGGAGTATACTCCTTGGCTTATTGTTGGACTGGGTAACCCAGGAAACAAGTATCATGGGACTCGGCACAATGTTGGTTTTGAAATGATTGATAGCATTGCTCAAGCGCAGGGAATTTTGATGAACACAATACAATCCAAAGCTCTAATTGGAATAGGTTCAATTGGAGAAGTACCAATTTTGTTGGCAAAGCCTCAGACTTACATGAATTTCTGTGGAGAATCGGTTGGACCTCTTGCTGCACATTACCAAATACCTTTACGGCACATCTTGTTGACATACGATGAAATGAGCTTGCCAAATGGCGTTCTTAGGCTGCAGCCAAAAGGAGGACATGGCCATCATAATGGGGTGAAGAGTGTAATGGGACACCTGGATGGTCGACGTGAGTTTCCTCGGCTATGTATTGGAATTGGAAACCCACCTGGGACTATGGACATGAAAGCTTTTCTCCTGCAGAAGTTCAGTTCGGTTGAGCGAAAACAGATCGATGCAGCTCTTGAACAAGGGGTTGAGGCAGTGAGAACCCTTGCACTGAATGGATTTAGCCAAAGAGTAAACAGATTCAATTTGTCCCAGAAATACAAGTATCATAAGGTTTGA

Protein sequence

MLYAASFQSVSLFSNSSTAHYHSPSTKPLVSTRLSVRASLPDSDNNNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHILLTYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFNLSQKYKYHKV
Homology
[Close]
BLAST of IVF0016973 vs. ExPASy Swiss-Prot
Match: Q9LF14 (Chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CRS2B PE=2 SV=1)

HSP 1 Score: 354.4 bits (908), Expect = 1.1e-96
Identity = 169/230 (73.48%), Postives = 194/230 (84.35%), Query Frame = 0 

Query: 21  YHSPSTKPLVSTRLSVRASLPDSDNNNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMI 80
           YH  + KP+   +     S      ++  KVEYTPWLIVGLGNPGNKYHGTRHNVGFEMI
Sbjct: 11  YHFQTQKPVFRKQRFRVCSSTSGGEDDRFKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMI 70

Query: 81  DSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHI 140
           D +A+ +G+LMNTIQSKALIGIG+I +VPILLAKPQTYMNF GESVG LA+HY++PLRHI
Sbjct: 71  DVLARKEGVLMNTIQSKALIGIGAIEDVPILLAKPQTYMNFSGESVGSLASHYRVPLRHI 130

Query: 141 LLTYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAF 200
           L+ YDEM+LPNGVLRLQPKGG G+HNGVKSVMGHLDGRR FPRL IGIG PPG MDMKAF
Sbjct: 131 LMIYDEMALPNGVLRLQPKGGQGYHNGVKSVMGHLDGRRNFPRLSIGIGKPPGNMDMKAF 190

Query: 201 LLQKFSSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFNLSQKYKYHKV 251
           LLQKFS +E+KQI+ ALEQG EAV+TL LNGF+Q ++RFNL QKYK+HKV
Sbjct: 191 LLQKFSPLEQKQIEEALEQGSEAVKTLVLNGFNQGISRFNLVQKYKFHKV 240

[Close]
BLAST of IVF0016973 vs. ExPASy Swiss-Prot
Match: Q9FKN4 (Chloroplastic group IIB intron splicing facilitator CRS2-A, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CRS2A PE=2 SV=1)

HSP 1 Score: 334.0 bits (855), Expect = 1.5e-90
Identity = 165/230 (71.74%), Postives = 185/230 (80.43%), Query Frame = 0 

Query: 21  YHSPSTKPLVSTRLSVRASLPDSDNNNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMI 80
           Y    TK       S+RASLP SDN   +K EYTPWLIVGLGNPG KY+GTRHN+GFEMI
Sbjct: 18  YKFSQTKSNSKRFSSLRASLPVSDNKL-LKFEYTPWLIVGLGNPGLKYYGTRHNIGFEMI 77

Query: 81  DSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHI 140
           D IA+A  I MNTIQSKAL+GIGS+GEVPILL KPQ YMNF GESVGPLAA+YQIPLRHI
Sbjct: 78  DHIARATDISMNTIQSKALVGIGSVGEVPILLVKPQGYMNFSGESVGPLAAYYQIPLRHI 137

Query: 141 LLTYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAF 200
           L+ YD+M L NGVLRLQPKGGH  HNG+K+V  HL+G R +PRL IGIGNPPG MDMKAF
Sbjct: 138 LMIYDDMGLSNGVLRLQPKGGHSQHNGLKNVTEHLNGCRGYPRLSIGIGNPPGNMDMKAF 197

Query: 201 LLQKFSSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFNLSQKYKYHKV 251
           LLQKFS +ERKQ+D  LEQGVE V+TL   GFS  ++RFNL QKYK+HKV
Sbjct: 198 LLQKFSPLERKQMDEGLEQGVEGVKTLVEEGFSDSISRFNLGQKYKFHKV 246

[Close]
BLAST of IVF0016973 vs. ExPASy Swiss-Prot
Match: Q9M5P4 (Chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic OS=Zea mays OX=4577 GN=CRS2 PE=1 SV=1)

HSP 1 Score: 325.5 bits (833), Expect = 5.3e-88
Identity = 167/257 (64.98%), Postives = 196/257 (76.26%), Query Frame = 0 

Query: 1   MLYAASFQSVSLFSNSSTAHYHSPS---TKPLVSTR----LSVRASLPDSDNNNGVKVEY 60
           +L AA   + S FS      +  P    T PL   R     +V +S+PD        VEY
Sbjct: 3   LLAAAIPSTSSHFSAPFLPSFRMPRKSLTAPLHRIRRPRPFTVVSSVPDPAAG---PVEY 62

Query: 61  TPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLA 120
           TPWLI GLGNPGNKY+GTRHNVGFEM+D IA  +GI MNTIQSK+L+GIGSIGEVP+L+ 
Sbjct: 63  TPWLIAGLGNPGNKYYGTRHNVGFEMVDRIAAEEGITMNTIQSKSLLGIGSIGEVPVLVV 122

Query: 121 KPQTYMNFCGESVGPLAAHYQIPLRHILLTYDEMSLPNGVLRLQPKGGHGHHNGVKSVMG 180
           KPQ+YMN+ GE++GPLAA+YQ+PLRHILL YD+ SLPNGVLRLQ KGGHG HNG+++V+ 
Sbjct: 123 KPQSYMNYSGEAIGPLAAYYQVPLRHILLIYDDTSLPNGVLRLQKKGGHGRHNGLQNVIE 182

Query: 181 HLDGRREFPRLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALEQGVEAVRTLALNGFS 240
           HLDGRREFPRL IGIG+PPG MD +AFLLQKFSS ER QID ALEQGV+AVRTL L GFS
Sbjct: 183 HLDGRREFPRLSIGIGSPPGKMDPRAFLLQKFSSEERVQIDTALEQGVDAVRTLVLKGFS 242

Query: 241 QRVNRFNLSQKYKYHKV 251
               RFNL QKYK+H+V
Sbjct: 243 GSTERFNLVQKYKFHRV 256

[Close]
BLAST of IVF0016973 vs. ExPASy Swiss-Prot
Match: Q5ZCL8 (Chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0132800 PE=2 SV=1)

HSP 1 Score: 324.3 bits (830), Expect = 1.2e-87
Identity = 156/228 (68.42%), Postives = 185/228 (81.14%), Query Frame = 0 

Query: 23  SPSTKPLVSTRLSVRASLPDSDNNNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDS 82
           +P  +  +  R++V AS+PD         EYTPWLI GLGNPG+KYHGTRHNVGFEM+D 
Sbjct: 35  APLRRTRLRRRIAVVASVPDPAAR---PAEYTPWLIAGLGNPGSKYHGTRHNVGFEMVDR 94

Query: 83  IAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHILL 142
           IA+ +GI MNTIQSK+L+GIGSIGEVP+LL KPQ+Y+N+ GE++GPLAA+YQ+PLRHIL+
Sbjct: 95  IARDEGITMNTIQSKSLLGIGSIGEVPVLLVKPQSYINYSGEAIGPLAAYYQVPLRHILV 154

Query: 143 TYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLL 202
            YDEMSLPNGVLRLQ KGGHG HNG+++VM  LD  RE PRL IGIG+PPG MD +AFLL
Sbjct: 155 MYDEMSLPNGVLRLQRKGGHGRHNGLQNVMECLDSSRELPRLSIGIGSPPGKMDTRAFLL 214

Query: 203 QKFSSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFNLSQKYKYHKV 251
           QKFSS ER QID ALEQGV+AVRTL L GFS  + RFNL QKYK+H V
Sbjct: 215 QKFSSEERLQIDTALEQGVDAVRTLVLKGFSGSIERFNLVQKYKFHSV 259

[Close]
BLAST of IVF0016973 vs. ExPASy Swiss-Prot
Match: Q6NLS8 (Peptidyl-tRNA hydrolase, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g19830 PE=2 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 2.9e-65
Identity = 115/197 (58.38%), Postives = 148/197 (75.13%), Query Frame = 0 

Query: 53  YTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILL 112
           + PWL +GLGNPG+KY GTRHN+GFEMID  A++ GI MN +  KA++G G + ++P++L
Sbjct: 16  HRPWLFLGLGNPGDKYKGTRHNIGFEMIDVFAESVGIQMNLVNFKAIMGQGFVADLPVIL 75

Query: 113 AKPQTYMNFCGESVGPLAAHYQIPLRHILLTYDEMSLPNGVLRLQPKGGHGHHNGVKSVM 172
           AKPQTYMN  GES GPLAA+Y++PL  +L+ +D+M LP GVLRLQ KGGHG HNG+KSVM
Sbjct: 76  AKPQTYMNLSGESSGPLAAYYKLPLNRVLVVHDDMQLPCGVLRLQEKGGHGCHNGLKSVM 135

Query: 173 GHLDGRREFPRLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALEQGVEAVRTLALNGF 232
            H  G REF RL IGIG PPG MD KAFLLQKFS   R+++D AL +GV+A++ +    F
Sbjct: 136 NHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFSMPARERMDKALAEGVDALKLVLAKDF 195

Query: 233 SQRVNRFNLSQKYKYHK 250
            +    FN+ QKYK+ K
Sbjct: 196 GESWRLFNVEQKYKHLK 212

[Close]
BLAST of IVF0016973 vs. ExPASy TrEMBL
Match: A0A1S3CFG5 (chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103500129 PE=3 SV=1)

HSP 1 Score: 507.3 bits (1305), Expect = 3.7e-140
Identity = 250/250 (100.00%), Postives = 250/250 (100.00%), Query Frame = 0 

Query: 1   MLYAASFQSVSLFSNSSTAHYHSPSTKPLVSTRLSVRASLPDSDNNNGVKVEYTPWLIVG 60
           MLYAASFQSVSLFSNSSTAHYHSPSTKPLVSTRLSVRASLPDSDNNNGVKVEYTPWLIVG
Sbjct: 1   MLYAASFQSVSLFSNSSTAHYHSPSTKPLVSTRLSVRASLPDSDNNNGVKVEYTPWLIVG 60

Query: 61  LGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMN 120
           LGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMN
Sbjct: 61  LGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMN 120

Query: 121 FCGESVGPLAAHYQIPLRHILLTYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRRE 180
           FCGESVGPLAAHYQIPLRHILLTYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRRE
Sbjct: 121 FCGESVGPLAAHYQIPLRHILLTYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRRE 180

Query: 181 FPRLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFN 240
           FPRLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFN
Sbjct: 181 FPRLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFN 240

Query: 241 LSQKYKYHKV 251
           LSQKYKYHKV
Sbjct: 241 LSQKYKYHKV 250

[Close]
BLAST of IVF0016973 vs. ExPASy TrEMBL
Match: A0A0A0LCC6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G257600 PE=3 SV=1)

HSP 1 Score: 484.6 bits (1246), Expect = 2.5e-133
Identity = 239/250 (95.60%), Postives = 246/250 (98.40%), Query Frame = 0 

Query: 1   MLYAASFQSVSLFSNSSTAHYHSPSTKPLVSTRLSVRASLPDSDNNNGVKVEYTPWLIVG 60
           ML+AASFQSVSLFSNSS+AH+H PSTKPLVSTRLSVRAS PDSD +NG+KVEYTPWLIVG
Sbjct: 1   MLFAASFQSVSLFSNSSSAHFHFPSTKPLVSTRLSVRASSPDSD-SNGLKVEYTPWLIVG 60

Query: 61  LGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMN 120
           LGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMN
Sbjct: 61  LGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMN 120

Query: 121 FCGESVGPLAAHYQIPLRHILLTYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRRE 180
           FCGESVGPLAAHYQIPLRH+LLTYDEM+LPNGVLRLQPK GHGHHNGVKSVMGHLDGRRE
Sbjct: 121 FCGESVGPLAAHYQIPLRHVLLTYDEMNLPNGVLRLQPKAGHGHHNGVKSVMGHLDGRRE 180

Query: 181 FPRLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFN 240
           FPRLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFN
Sbjct: 181 FPRLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFN 240

Query: 241 LSQKYKYHKV 251
           LSQKYKYHKV
Sbjct: 241 LSQKYKYHKV 249

[Close]
BLAST of IVF0016973 vs. ExPASy TrEMBL
Match: A0A6J1K6X4 (chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111492843 PE=3 SV=1)

HSP 1 Score: 453.4 bits (1165), Expect = 6.3e-124
Identity = 228/250 (91.20%), Postives = 234/250 (93.60%), Query Frame = 0 

Query: 1   MLYAASFQSVSLFSNSSTAHYHSPSTKPLVSTRLSVRASLPDSDNNNGVKVEYTPWLIVG 60
           MLYAAS  SV LFSNSS+AH+ S   K LV TRLSVRASL   DN+NGVKVEYTPWLIVG
Sbjct: 1   MLYAASVPSVCLFSNSSSAHFPSRFPKRLVPTRLSVRASL--QDNDNGVKVEYTPWLIVG 60

Query: 61  LGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMN 120
           LGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMN
Sbjct: 61  LGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMN 120

Query: 121 FCGESVGPLAAHYQIPLRHILLTYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRRE 180
           FCGESVGPLA HYQIPLRHILL YDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRRE
Sbjct: 121 FCGESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRRE 180

Query: 181 FPRLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFN 240
           FPRLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALEQGVEAVRTLAL GFS+ V+RFN
Sbjct: 181 FPRLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALEQGVEAVRTLALKGFSKGVDRFN 240

Query: 241 LSQKYKYHKV 251
           L+QKYKYHKV
Sbjct: 241 LTQKYKYHKV 248

[Close]
BLAST of IVF0016973 vs. ExPASy TrEMBL
Match: A0A6J1D2Z6 (chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111016856 PE=3 SV=1)

HSP 1 Score: 453.0 bits (1164), Expect = 8.2e-124
Identity = 228/250 (91.20%), Postives = 233/250 (93.20%), Query Frame = 0 

Query: 1   MLYAASFQSVSLFSNSSTAHYHSPSTKPLVSTRLSVRASLPDSDNNNGVKVEYTPWLIVG 60
           MLYA S QSV L SNSS+AH+     K LV TRLSVRASL   DN+NGVKVEYTPWLIVG
Sbjct: 1   MLYAVSVQSVCLLSNSSSAHFRPRLRKRLVPTRLSVRASL--LDNDNGVKVEYTPWLIVG 60

Query: 61  LGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMN 120
           LGNPGNKYHGTRHNVGFEMIDSIAQAQ ILMNTIQSKALIGIGSIGEVPILLAKPQTYMN
Sbjct: 61  LGNPGNKYHGTRHNVGFEMIDSIAQAQDILMNTIQSKALIGIGSIGEVPILLAKPQTYMN 120

Query: 121 FCGESVGPLAAHYQIPLRHILLTYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRRE 180
           FCGESVGPLAAHYQIPLRHILL YDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRRE
Sbjct: 121 FCGESVGPLAAHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRRE 180

Query: 181 FPRLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFN 240
           FPRLCIGIGNPPGTMDMKAFLLQKF SVERKQIDAALEQGVEAVRTLALNGFSQRVNRFN
Sbjct: 181 FPRLCIGIGNPPGTMDMKAFLLQKFGSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFN 240

Query: 241 LSQKYKYHKV 251
           L+QKYKY+KV
Sbjct: 241 LTQKYKYNKV 248

[Close]
BLAST of IVF0016973 vs. ExPASy TrEMBL
Match: A0A6J1G9M7 (chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111452203 PE=3 SV=1)

HSP 1 Score: 452.6 bits (1163), Expect = 1.1e-123
Identity = 227/250 (90.80%), Postives = 234/250 (93.60%), Query Frame = 0 

Query: 1   MLYAASFQSVSLFSNSSTAHYHSPSTKPLVSTRLSVRASLPDSDNNNGVKVEYTPWLIVG 60
           MLYAAS  SV LFSNSS AH+ S   K LV TRLSVRASLP  DN+NGVKVEYTPWLIVG
Sbjct: 1   MLYAASVPSVCLFSNSSIAHFPSRFPKRLVPTRLSVRASLP--DNDNGVKVEYTPWLIVG 60

Query: 61  LGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMN 120
           LGNPGNKYHGTRHNVGF+MIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMN
Sbjct: 61  LGNPGNKYHGTRHNVGFDMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMN 120

Query: 121 FCGESVGPLAAHYQIPLRHILLTYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRRE 180
           FCGESVGPLA HYQIPLRHILL YDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRRE
Sbjct: 121 FCGESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRRE 180

Query: 181 FPRLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFN 240
           FPRLCIGIGNPPGTMD+KAFLLQKFSSVERKQIDAALEQGVEAVRTLAL GFS+ V+RFN
Sbjct: 181 FPRLCIGIGNPPGTMDIKAFLLQKFSSVERKQIDAALEQGVEAVRTLALKGFSKGVDRFN 240

Query: 241 LSQKYKYHKV 251
           L+QKYKYHKV
Sbjct: 241 LTQKYKYHKV 248

[Close]
BLAST of IVF0016973 vs. NCBI nr
Match: XP_008461557.1 (PREDICTED: chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic [Cucumis melo])

HSP 1 Score: 505 bits (1301), Expect = 1.43e-180
Identity = 250/250 (100.00%), Postives = 250/250 (100.00%), Query Frame = 0 

Query: 1   MLYAASFQSVSLFSNSSTAHYHSPSTKPLVSTRLSVRASLPDSDNNNGVKVEYTPWLIVG 60
           MLYAASFQSVSLFSNSSTAHYHSPSTKPLVSTRLSVRASLPDSDNNNGVKVEYTPWLIVG
Sbjct: 1   MLYAASFQSVSLFSNSSTAHYHSPSTKPLVSTRLSVRASLPDSDNNNGVKVEYTPWLIVG 60

Query: 61  LGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMN 120
           LGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMN
Sbjct: 61  LGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMN 120

Query: 121 FCGESVGPLAAHYQIPLRHILLTYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRRE 180
           FCGESVGPLAAHYQIPLRHILLTYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRRE
Sbjct: 121 FCGESVGPLAAHYQIPLRHILLTYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRRE 180

Query: 181 FPRLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFN 240
           FPRLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFN
Sbjct: 181 FPRLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFN 240

Query: 241 LSQKYKYHKV 250
           LSQKYKYHKV
Sbjct: 241 LSQKYKYHKV 250

[Close]
BLAST of IVF0016973 vs. NCBI nr
Match: XP_004145630.1 (chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic [Cucumis sativus] >KGN57706.1 hypothetical protein Csa_010483 [Cucumis sativus])

HSP 1 Score: 482 bits (1241), Expect = 1.94e-171
Identity = 239/250 (95.60%), Postives = 246/250 (98.40%), Query Frame = 0 

Query: 1   MLYAASFQSVSLFSNSSTAHYHSPSTKPLVSTRLSVRASLPDSDNNNGVKVEYTPWLIVG 60
           ML+AASFQSVSLFSNSS+AH+H PSTKPLVSTRLSVRAS PDSD+N G+KVEYTPWLIVG
Sbjct: 1   MLFAASFQSVSLFSNSSSAHFHFPSTKPLVSTRLSVRASSPDSDSN-GLKVEYTPWLIVG 60

Query: 61  LGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMN 120
           LGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMN
Sbjct: 61  LGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMN 120

Query: 121 FCGESVGPLAAHYQIPLRHILLTYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRRE 180
           FCGESVGPLAAHYQIPLRH+LLTYDEM+LPNGVLRLQPK GHGHHNGVKSVMGHLDGRRE
Sbjct: 121 FCGESVGPLAAHYQIPLRHVLLTYDEMNLPNGVLRLQPKAGHGHHNGVKSVMGHLDGRRE 180

Query: 181 FPRLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFN 240
           FPRLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFN
Sbjct: 181 FPRLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFN 240

Query: 241 LSQKYKYHKV 250
           LSQKYKYHKV
Sbjct: 241 LSQKYKYHKV 249

[Close]
BLAST of IVF0016973 vs. NCBI nr
Match: XP_038899626.1 (chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic [Benincasa hispida])

HSP 1 Score: 481 bits (1239), Expect = 3.78e-171
Identity = 240/250 (96.00%), Postives = 244/250 (97.60%), Query Frame = 0 

Query: 1   MLYAASFQSVSLFSNSSTAHYHSPSTKPLVSTRLSVRASLPDSDNNNGVKVEYTPWLIVG 60
           MLYAAS QSV LFSNSSTAH+H  STKPLVSTRLS+RASLPD+DN  GVKVEYTPWLIVG
Sbjct: 1   MLYAASVQSVCLFSNSSTAHFHPRSTKPLVSTRLSIRASLPDNDN--GVKVEYTPWLIVG 60

Query: 61  LGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMN 120
           LGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMN
Sbjct: 61  LGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMN 120

Query: 121 FCGESVGPLAAHYQIPLRHILLTYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRRE 180
           FCGESVGPLAAHYQIPLRHILLTYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRRE
Sbjct: 121 FCGESVGPLAAHYQIPLRHILLTYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRRE 180

Query: 181 FPRLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFN 240
           FPRLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFN
Sbjct: 181 FPRLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFN 240

Query: 241 LSQKYKYHKV 250
           L+QKYKYHKV
Sbjct: 241 LTQKYKYHKV 248

[Close]
BLAST of IVF0016973 vs. NCBI nr
Match: XP_023523313.1 (chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 453 bits (1166), Expect = 5.07e-160
Identity = 229/250 (91.60%), Postives = 234/250 (93.60%), Query Frame = 0 

Query: 1   MLYAASFQSVSLFSNSSTAHYHSPSTKPLVSTRLSVRASLPDSDNNNGVKVEYTPWLIVG 60
           MLYAAS  SV LFSNSS AH+ S   K LV TRLSVRASLPD+DN  GVKVEYTPWLIVG
Sbjct: 1   MLYAASVPSVCLFSNSSIAHFPSRFPKRLVPTRLSVRASLPDNDN--GVKVEYTPWLIVG 60

Query: 61  LGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMN 120
           LGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMN
Sbjct: 61  LGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMN 120

Query: 121 FCGESVGPLAAHYQIPLRHILLTYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRRE 180
           FCGESVGPLA HYQIPLRHILL YDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRRE
Sbjct: 121 FCGESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRRE 180

Query: 181 FPRLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFN 240
           FPRLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALEQGVEAVRTLAL GFS+ V+RFN
Sbjct: 181 FPRLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALEQGVEAVRTLALKGFSKGVDRFN 240

Query: 241 LSQKYKYHKV 250
           L+QKYKYHKV
Sbjct: 241 LTQKYKYHKV 248

[Close]
BLAST of IVF0016973 vs. NCBI nr
Match: XP_022998092.1 (chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 451 bits (1161), Expect = 2.93e-159
Identity = 228/250 (91.20%), Postives = 234/250 (93.60%), Query Frame = 0 

Query: 1   MLYAASFQSVSLFSNSSTAHYHSPSTKPLVSTRLSVRASLPDSDNNNGVKVEYTPWLIVG 60
           MLYAAS  SV LFSNSS+AH+ S   K LV TRLSVRASL   DN+NGVKVEYTPWLIVG
Sbjct: 1   MLYAASVPSVCLFSNSSSAHFPSRFPKRLVPTRLSVRASL--QDNDNGVKVEYTPWLIVG 60

Query: 61  LGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMN 120
           LGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMN
Sbjct: 61  LGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMN 120

Query: 121 FCGESVGPLAAHYQIPLRHILLTYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRRE 180
           FCGESVGPLA HYQIPLRHILL YDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRRE
Sbjct: 121 FCGESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRRE 180

Query: 181 FPRLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFN 240
           FPRLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALEQGVEAVRTLAL GFS+ V+RFN
Sbjct: 181 FPRLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALEQGVEAVRTLALKGFSKGVDRFN 240

Query: 241 LSQKYKYHKV 250
           L+QKYKYHKV
Sbjct: 241 LTQKYKYHKV 248

[Close]
BLAST of IVF0016973 vs. TAIR 10
Match: AT5G16140.1 (Peptidyl-tRNA hydrolase family protein )

HSP 1 Score: 354.4 bits (908), Expect = 7.6e-98
Identity = 169/230 (73.48%), Postives = 194/230 (84.35%), Query Frame = 0 

Query: 21  YHSPSTKPLVSTRLSVRASLPDSDNNNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMI 80
           YH  + KP+   +     S      ++  KVEYTPWLIVGLGNPGNKYHGTRHNVGFEMI
Sbjct: 11  YHFQTQKPVFRKQRFRVCSSTSGGEDDRFKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMI 70

Query: 81  DSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHI 140
           D +A+ +G+LMNTIQSKALIGIG+I +VPILLAKPQTYMNF GESVG LA+HY++PLRHI
Sbjct: 71  DVLARKEGVLMNTIQSKALIGIGAIEDVPILLAKPQTYMNFSGESVGSLASHYRVPLRHI 130

Query: 141 LLTYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAF 200
           L+ YDEM+LPNGVLRLQPKGG G+HNGVKSVMGHLDGRR FPRL IGIG PPG MDMKAF
Sbjct: 131 LMIYDEMALPNGVLRLQPKGGQGYHNGVKSVMGHLDGRRNFPRLSIGIGKPPGNMDMKAF 190

Query: 201 LLQKFSSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFNLSQKYKYHKV 251
           LLQKFS +E+KQI+ ALEQG EAV+TL LNGF+Q ++RFNL QKYK+HKV
Sbjct: 191 LLQKFSPLEQKQIEEALEQGSEAVKTLVLNGFNQGISRFNLVQKYKFHKV 240

[Close]
BLAST of IVF0016973 vs. TAIR 10
Match: AT5G16140.2 (Peptidyl-tRNA hydrolase family protein )

HSP 1 Score: 354.4 bits (908), Expect = 7.6e-98
Identity = 169/230 (73.48%), Postives = 194/230 (84.35%), Query Frame = 0 

Query: 21  YHSPSTKPLVSTRLSVRASLPDSDNNNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMI 80
           YH  + KP+   +     S      ++  KVEYTPWLIVGLGNPGNKYHGTRHNVGFEMI
Sbjct: 11  YHFQTQKPVFRKQRFRVCSSTSGGEDDRFKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMI 70

Query: 81  DSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHI 140
           D +A+ +G+LMNTIQSKALIGIG+I +VPILLAKPQTYMNF GESVG LA+HY++PLRHI
Sbjct: 71  DVLARKEGVLMNTIQSKALIGIGAIEDVPILLAKPQTYMNFSGESVGSLASHYRVPLRHI 130

Query: 141 LLTYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAF 200
           L+ YDEM+LPNGVLRLQPKGG G+HNGVKSVMGHLDGRR FPRL IGIG PPG MDMKAF
Sbjct: 131 LMIYDEMALPNGVLRLQPKGGQGYHNGVKSVMGHLDGRRNFPRLSIGIGKPPGNMDMKAF 190

Query: 201 LLQKFSSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFNLSQKYKYHKV 251
           LLQKFS +E+KQI+ ALEQG EAV+TL LNGF+Q ++RFNL QKYK+HKV
Sbjct: 191 LLQKFSPLEQKQIEEALEQGSEAVKTLVLNGFNQGISRFNLVQKYKFHKV 240

[Close]
BLAST of IVF0016973 vs. TAIR 10
Match: AT5G38290.2 (Peptidyl-tRNA hydrolase family protein )

HSP 1 Score: 334.0 bits (855), Expect = 1.1e-91
Identity = 165/230 (71.74%), Postives = 185/230 (80.43%), Query Frame = 0 

Query: 21  YHSPSTKPLVSTRLSVRASLPDSDNNNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMI 80
           Y    TK       S+RASLP SDN   +K EYTPWLIVGLGNPG KY+GTRHN+GFEMI
Sbjct: 22  YKFSQTKSNSKRFSSLRASLPVSDNKL-LKFEYTPWLIVGLGNPGLKYYGTRHNIGFEMI 81

Query: 81  DSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHI 140
           D IA+A  I MNTIQSKAL+GIGS+GEVPILL KPQ YMNF GESVGPLAA+YQIPLRHI
Sbjct: 82  DHIARATDISMNTIQSKALVGIGSVGEVPILLVKPQGYMNFSGESVGPLAAYYQIPLRHI 141

Query: 141 LLTYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAF 200
           L+ YD+M L NGVLRLQPKGGH  HNG+K+V  HL+G R +PRL IGIGNPPG MDMKAF
Sbjct: 142 LMIYDDMGLSNGVLRLQPKGGHSQHNGLKNVTEHLNGCRGYPRLSIGIGNPPGNMDMKAF 201

Query: 201 LLQKFSSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFNLSQKYKYHKV 251
           LLQKFS +ERKQ+D  LEQGVE V+TL   GFS  ++RFNL QKYK+HKV
Sbjct: 202 LLQKFSPLERKQMDEGLEQGVEGVKTLVEEGFSDSISRFNLGQKYKFHKV 250

[Close]
BLAST of IVF0016973 vs. TAIR 10
Match: AT5G38290.1 (Peptidyl-tRNA hydrolase family protein )

HSP 1 Score: 334.0 bits (855), Expect = 1.1e-91
Identity = 165/230 (71.74%), Postives = 185/230 (80.43%), Query Frame = 0 

Query: 21  YHSPSTKPLVSTRLSVRASLPDSDNNNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMI 80
           Y    TK       S+RASLP SDN   +K EYTPWLIVGLGNPG KY+GTRHN+GFEMI
Sbjct: 18  YKFSQTKSNSKRFSSLRASLPVSDNKL-LKFEYTPWLIVGLGNPGLKYYGTRHNIGFEMI 77

Query: 81  DSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHI 140
           D IA+A  I MNTIQSKAL+GIGS+GEVPILL KPQ YMNF GESVGPLAA+YQIPLRHI
Sbjct: 78  DHIARATDISMNTIQSKALVGIGSVGEVPILLVKPQGYMNFSGESVGPLAAYYQIPLRHI 137

Query: 141 LLTYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAF 200
           L+ YD+M L NGVLRLQPKGGH  HNG+K+V  HL+G R +PRL IGIGNPPG MDMKAF
Sbjct: 138 LMIYDDMGLSNGVLRLQPKGGHSQHNGLKNVTEHLNGCRGYPRLSIGIGNPPGNMDMKAF 197

Query: 201 LLQKFSSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFNLSQKYKYHKV 251
           LLQKFS +ERKQ+D  LEQGVE V+TL   GFS  ++RFNL QKYK+HKV
Sbjct: 198 LLQKFSPLERKQMDEGLEQGVEGVKTLVEEGFSDSISRFNLGQKYKFHKV 246

[Close]
BLAST of IVF0016973 vs. TAIR 10
Match: AT5G19830.1 (Peptidyl-tRNA hydrolase family protein )

HSP 1 Score: 250.0 bits (637), Expect = 2.0e-66
Identity = 115/197 (58.38%), Postives = 148/197 (75.13%), Query Frame = 0 

Query: 53  YTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILL 112
           + PWL +GLGNPG+KY GTRHN+GFEMID  A++ GI MN +  KA++G G + ++P++L
Sbjct: 16  HRPWLFLGLGNPGDKYKGTRHNIGFEMIDVFAESVGIQMNLVNFKAIMGQGFVADLPVIL 75

Query: 113 AKPQTYMNFCGESVGPLAAHYQIPLRHILLTYDEMSLPNGVLRLQPKGGHGHHNGVKSVM 172
           AKPQTYMN  GES GPLAA+Y++PL  +L+ +D+M LP GVLRLQ KGGHG HNG+KSVM
Sbjct: 76  AKPQTYMNLSGESSGPLAAYYKLPLNRVLVVHDDMQLPCGVLRLQEKGGHGCHNGLKSVM 135

Query: 173 GHLDGRREFPRLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALEQGVEAVRTLALNGF 232
            H  G REF RL IGIG PPG MD KAFLLQKFS   R+++D AL +GV+A++ +    F
Sbjct: 136 NHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFSMPARERMDKALAEGVDALKLVLAKDF 195

Query: 233 SQRVNRFNLSQKYKYHK 250
            +    FN+ QKYK+ K
Sbjct: 196 GESWRLFNVEQKYKHLK 212

The following BLAST results are available for this feature:
BLAST of IVF0016973 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9LF141.1e-9673.48Chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic OS=Ara... [more]
Q9FKN41.5e-9071.74Chloroplastic group IIB intron splicing facilitator CRS2-A, chloroplastic OS=Ara... [more]
Q9M5P45.3e-8864.98Chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic OS=Zea m... [more]
Q5ZCL81.2e-8768.42Chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic OS=Oryza... [more]
Q6NLS82.9e-6558.38Peptidyl-tRNA hydrolase, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g19... [more]
BLAST of IVF0016973 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3CFG53.7e-140100.00chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic OS=Cuc... [more]
A0A0A0LCC62.5e-13395.60Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G257600 PE=3 SV=1[more]
A0A6J1K6X46.3e-12491.20chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic-like O... [more]
A0A6J1D2Z68.2e-12491.20chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic-like O... [more]
A0A6J1G9M71.1e-12390.80chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic-like O... [more]
BLAST of IVF0016973 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008461557.11.43e-180100.00PREDICTED: chloroplastic group IIB intron splicing facilitator CRS2-B, chloropla... [more]
XP_004145630.11.94e-17195.60chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic [Cucum... [more]
XP_038899626.13.78e-17196.00chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic [Benin... [more]
XP_023523313.15.07e-16091.60chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic-like [... [more]
XP_022998092.12.93e-15991.20chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic-like [... [more]
BLAST of IVF0016973 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G16140.17.6e-9873.48Peptidyl-tRNA hydrolase family protein [more]
AT5G16140.27.6e-9873.48Peptidyl-tRNA hydrolase family protein [more]
AT5G38290.21.1e-9171.74Peptidyl-tRNA hydrolase family protein [more]
AT5G38290.11.1e-9171.74Peptidyl-tRNA hydrolase family protein [more]
AT5G19830.12.0e-6658.38Peptidyl-tRNA hydrolase family protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001328Peptidyl-tRNA hydrolasePFAMPF01195Pept_tRNA_hydrocoord: 57..240
e-value: 7.8E-55
score: 185.5
IPR001328Peptidyl-tRNA hydrolaseTIGRFAMTIGR00447TIGR00447coord: 57..240
e-value: 2.5E-52
score: 175.3
IPR001328Peptidyl-tRNA hydrolasePANTHERPTHR17224PEPTIDYL-TRNA HYDROLASEcoord: 20..249
IPR001328Peptidyl-tRNA hydrolaseHAMAPMF_00083Pept_tRNA_hydro_bactcoord: 55..233
score: 30.024075
IPR036416Peptidyl-tRNA hydrolase superfamilyGENE3D3.40.50.1470coord: 51..250
e-value: 8.9E-74
score: 249.3
IPR036416Peptidyl-tRNA hydrolase superfamilySUPERFAMILY53178Peptidyl-tRNA hydrolase-likecoord: 54..240
NoneNo IPR availablePANTHERPTHR17224:SF3CHLOROPLASTIC GROUP IIB INTRON SPLICING FACILITATOR CRS2-B, CHLOROPLASTICcoord: 20..249
NoneNo IPR availableCDDcd02406CRS2coord: 54..244
e-value: 1.30324E-131
score: 367.574
IPR018171Peptidyl-tRNA hydrolase, conserved sitePROSITEPS01196PEPT_TRNA_HYDROL_2coord: 161..171
IPR018171Peptidyl-tRNA hydrolase, conserved sitePROSITEPS01195PEPT_TRNA_HYDROL_1coord: 68..81

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0016973.2IVF0016973.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0004045 aminoacyl-tRNA hydrolase activity