IVF0016891 (gene) Melon (IVF77) v1

Overview
NameIVF0016891
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Locationchr04: 11776279 .. 11776515 (-)
RNA-Seq ExpressionIVF0016891
SyntenyIVF0016891
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATAAGGTAGTTGATGACCCACTCCAAAAGGGAAAAGACATCACCTTTAAAGTAGCTGACAAGACGAGCCTCCCTTCGCCACTTAAGAAAACTCCAACGTCCACAACGCGTAATGCTGAGCAAAAGGAGGTGACAAGAGACGACGAAGATCATAAGGATTATTTCTTTAAATTCATCGATGATCACATTTGTAAACCATTAGGAAGCGGATTTGAAGATGTATTCCAAGGCTAA

mRNA sequence

ATGGATAAGGTAGTTGATGACCCACTCCAAAAGGGAAAAGACATCACCTTTAAAGTAGCTGACAAGACGAGCCTCCCTTCGCCACTTAAGAAAACTCCAACGTCCACAACGCGTAATGCTGAGCAAAAGGAGGTGACAAGAGACGACGAAGATCATAAGGATTATTTCTTTAAATTCATCGATGATCACATTTGTAAACCATTAGGAAGCGGATTTGAAGATGTATTCCAAGGCTAA

Coding sequence (CDS)

ATGGATAAGGTAGTTGATGACCCACTCCAAAAGGGAAAAGACATCACCTTTAAAGTAGCTGACAAGACGAGCCTCCCTTCGCCACTTAAGAAAACTCCAACGTCCACAACGCGTAATGCTGAGCAAAAGGAGGTGACAAGAGACGACGAAGATCATAAGGATTATTTCTTTAAATTCATCGATGATCACATTTGTAAACCATTAGGAAGCGGATTTGAAGATGTATTCCAAGGCTAA

Protein sequence

MDKVVDDPLQKGKDITFKVADKTSLPSPLKKTPTSTTRNAEQKEVTRDDEDHKDYFFKFIDDHICKPLGSGFEDVFQG
Homology
BLAST of IVF0016891 vs. ExPASy TrEMBL
Match: A0A5D3BIL3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold487G00570 PE=4 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 3.4e-36
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0

Query: 1  MDKVVDDPLQKGKDITFKVADKTSLPSPLKKTPTSTTRNAEQKEVTRDDEDHKDYFFKFI 60
          MDKVVDDPLQKGKDITFKVADKTSLPSPLKKTPTSTTRNAEQKEVTRDDEDHKDYFFKFI
Sbjct: 1  MDKVVDDPLQKGKDITFKVADKTSLPSPLKKTPTSTTRNAEQKEVTRDDEDHKDYFFKFI 60

Query: 61 DDHICKPLGSGFEDVFQG 79
          DDHICKPLGSGFEDVFQG
Sbjct: 61 DDHICKPLGSGFEDVFQG 78

BLAST of IVF0016891 vs. ExPASy TrEMBL
Match: A0A5A7UNI4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold288G001510 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 3.6e-17
Identity = 48/77 (62.34%), Postives = 61/77 (79.22%), Query Frame = 0

Query: 1   MDKVVDDPLQKGKDITFKVADKTSLPSPLKKTPTSTTRNAEQKEVTRDDEDHKDYFFKFI 60
           ++K VDDPLQKGK+ T + A KTSLP   K+T    T+NA+QKE+ RDDED +DY FKFI
Sbjct: 128 LEKAVDDPLQKGKETTSEAAGKTSLPLLPKQTREPATQNAKQKEMIRDDEDGEDYVFKFI 187

Query: 61  DDHICKPLGSGFEDVFQ 78
           +D+ICKP+G+GFE VFQ
Sbjct: 188 NDYICKPMGNGFEVVFQ 204

BLAST of IVF0016891 vs. ExPASy TrEMBL
Match: A0A5D3DHY1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G003250 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 3.3e-15
Identity = 44/68 (64.71%), Postives = 53/68 (77.94%), Query Frame = 0

Query: 10 QKGKDITFKVADKTSLPSPLKKTPTSTTRNAEQKEVTRDDEDHKDYFFKFIDDHICKPLG 69
          ++ K  T +VA KTSLPS  K+T   TT+N +QKE  RDD+D KDYFFKFIDD +CKPLG
Sbjct: 5  KREKKTTSEVAKKTSLPSSPKQTQKPTTQNTKQKEAARDDKDDKDYFFKFIDDQVCKPLG 64

Query: 70 SGFEDVFQ 78
          SGF+DVFQ
Sbjct: 65 SGFQDVFQ 72

BLAST of IVF0016891 vs. ExPASy TrEMBL
Match: A0A5D3E1H0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2208G00350 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.5e-12
Identity = 38/77 (49.35%), Postives = 56/77 (72.73%), Query Frame = 0

Query: 1   MDKVVDDPLQKGKDITFKVADKTSLPSPLKKTPTSTTRNAEQKEVTRDDEDHKDYFFKFI 60
           ++K +DDPLQK K +  + A KT  PSP K++P  T ++ +QKE  RDD+D  +Y+FKFI
Sbjct: 89  LEKAIDDPLQKRKQVDSEDASKTRQPSPPKQSPKPTMQDTKQKEAIRDDDDDDEYYFKFI 148

Query: 61  DDHICKPLGSGFEDVFQ 78
           ++++ +PL  GFEDVFQ
Sbjct: 149 NENVSQPLRYGFEDVFQ 165

BLAST of IVF0016891 vs. ExPASy TrEMBL
Match: A0A5A7TJU0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold320G00130 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.5e-12
Identity = 38/77 (49.35%), Postives = 56/77 (72.73%), Query Frame = 0

Query: 1   MDKVVDDPLQKGKDITFKVADKTSLPSPLKKTPTSTTRNAEQKEVTRDDEDHKDYFFKFI 60
           ++K +DDPLQK K +  + A KT  PSP K++P  T ++ +QKE  RDD+D  +Y+FKFI
Sbjct: 134 LEKAIDDPLQKRKQVDSEDASKTRQPSPPKQSPKPTMQDTKQKEAIRDDDDDDEYYFKFI 193

Query: 61  DDHICKPLGSGFEDVFQ 78
           ++++ +PL  GFEDVFQ
Sbjct: 194 NENVSQPLRYGFEDVFQ 210

BLAST of IVF0016891 vs. NCBI nr
Match: KAA0037894.1 (hypothetical protein E6C27_scaffold36G00630 [Cucumis melo var. makuwa] >TYJ98028.1 hypothetical protein E5676_scaffold487G00570 [Cucumis melo var. makuwa])

HSP 1 Score: 159 bits (403), Expect = 3.09e-49
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0

Query: 1  MDKVVDDPLQKGKDITFKVADKTSLPSPLKKTPTSTTRNAEQKEVTRDDEDHKDYFFKFI 60
          MDKVVDDPLQKGKDITFKVADKTSLPSPLKKTPTSTTRNAEQKEVTRDDEDHKDYFFKFI
Sbjct: 1  MDKVVDDPLQKGKDITFKVADKTSLPSPLKKTPTSTTRNAEQKEVTRDDEDHKDYFFKFI 60

Query: 61 DDHICKPLGSGFEDVFQG 78
          DDHICKPLGSGFEDVFQG
Sbjct: 61 DDHICKPLGSGFEDVFQG 78

BLAST of IVF0016891 vs. NCBI nr
Match: KAA0056630.1 (hypothetical protein E6C27_scaffold288G001510 [Cucumis melo var. makuwa])

HSP 1 Score: 96.7 bits (239), Expect = 9.00e-23
Identity = 48/77 (62.34%), Postives = 61/77 (79.22%), Query Frame = 0

Query: 1   MDKVVDDPLQKGKDITFKVADKTSLPSPLKKTPTSTTRNAEQKEVTRDDEDHKDYFFKFI 60
           ++K VDDPLQKGK+ T + A KTSLP   K+T    T+NA+QKE+ RDDED +DY FKFI
Sbjct: 128 LEKAVDDPLQKGKETTSEAAGKTSLPLLPKQTREPATQNAKQKEMIRDDEDGEDYVFKFI 187

Query: 61  DDHICKPLGSGFEDVFQ 77
           +D+ICKP+G+GFE VFQ
Sbjct: 188 NDYICKPMGNGFEVVFQ 204

BLAST of IVF0016891 vs. NCBI nr
Match: TYK23271.1 (hypothetical protein E5676_scaffold142G003250 [Cucumis melo var. makuwa])

HSP 1 Score: 90.5 bits (223), Expect = 1.62e-21
Identity = 44/68 (64.71%), Postives = 53/68 (77.94%), Query Frame = 0

Query: 10 QKGKDITFKVADKTSLPSPLKKTPTSTTRNAEQKEVTRDDEDHKDYFFKFIDDHICKPLG 69
          ++ K  T +VA KTSLPS  K+T   TT+N +QKE  RDD+D KDYFFKFIDD +CKPLG
Sbjct: 5  KREKKTTSEVAKKTSLPSSPKQTQKPTTQNTKQKEAARDDKDDKDYFFKFIDDQVCKPLG 64

Query: 70 SGFEDVFQ 77
          SGF+DVFQ
Sbjct: 65 SGFQDVFQ 72

BLAST of IVF0016891 vs. NCBI nr
Match: KAA0054482.1 (hypothetical protein E6C27_scaffold24G002610 [Cucumis melo var. makuwa])

HSP 1 Score: 80.1 bits (196), Expect = 6.71e-17
Identity = 39/68 (57.35%), Postives = 53/68 (77.94%), Query Frame = 0

Query: 1   MDKVVDDPLQKGKDITFKVADKTSLPSPLKKTPTSTTRNAEQKEVTRDDEDHKDYFFKFI 60
           ++K +D+PLQK K+ TF+VA + SLP   K+TP  T  NA+QKE T++D+D +DY FKFI
Sbjct: 72  LEKKIDNPLQKEKETTFEVAGEISLPLRPKQTPGPTPHNAKQKEATKNDKDDEDYVFKFI 131

Query: 61  DDHICKPL 68
           DD+ICKPL
Sbjct: 132 DDYICKPL 139

BLAST of IVF0016891 vs. NCBI nr
Match: TYK29776.1 (hypothetical protein E5676_scaffold2208G00350 [Cucumis melo var. makuwa])

HSP 1 Score: 81.3 bits (199), Expect = 7.42e-17
Identity = 38/77 (49.35%), Postives = 56/77 (72.73%), Query Frame = 0

Query: 1   MDKVVDDPLQKGKDITFKVADKTSLPSPLKKTPTSTTRNAEQKEVTRDDEDHKDYFFKFI 60
           ++K +DDPLQK K +  + A KT  PSP K++P  T ++ +QKE  RDD+D  +Y+FKFI
Sbjct: 89  LEKAIDDPLQKRKQVDSEDASKTRQPSPPKQSPKPTMQDTKQKEAIRDDDDDDEYYFKFI 148

Query: 61  DDHICKPLGSGFEDVFQ 77
           ++++ +PL  GFEDVFQ
Sbjct: 149 NENVSQPLRYGFEDVFQ 165

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3BIL33.4e-36100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7UNI43.6e-1762.34Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3DHY13.3e-1564.71Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3E1H01.5e-1249.35Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7TJU01.5e-1249.35Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
Match NameE-valueIdentityDescription
KAA0037894.13.09e-49100.00hypothetical protein E6C27_scaffold36G00630 [Cucumis melo var. makuwa] >TYJ98028... [more]
KAA0056630.19.00e-2362.34hypothetical protein E6C27_scaffold288G001510 [Cucumis melo var. makuwa][more]
TYK23271.11.62e-2164.71hypothetical protein E5676_scaffold142G003250 [Cucumis melo var. makuwa][more]
KAA0054482.16.71e-1757.35hypothetical protein E6C27_scaffold24G002610 [Cucumis melo var. makuwa][more]
TYK29776.17.42e-1749.35hypothetical protein E5676_scaffold2208G00350 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 24..47

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0016891.1IVF0016891.1mRNA