IVF0016811 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGTTTTTCGTGAGGCTCGTCGATTACGGTTGAGGCCATTGCCATTTTTCTGAAGCAGACAGAGCTTTTGCATCTCCTCCATAGTCGTCTACAATGGGGCGTATGCACAGCAGAGGGTCAGTTTCTCTTCTTGTCTTCTACCCATCTTCTTTTTCCTTTGATTCAATGACTCAATCCTTCCTCTCATTTTCCATTGCAGGAAAGGTATTTCAGCTTCAGCATTGCCGTACAAGAGGACTCCACCCAGTTGGCTTAAGATTTCTACTCAAGATGTAAGTACCCTTTCACTTCAAATGTTTGAGCTGCGTCTTACTTTGGTTGGAATGAATAGTTATGGAATGTGTTTTGTTTAGGTTGAGGAAAACATCTGCAAATTTGCGAAGAAGGGTTTGACTCCGTCTCAGATCGGTGTCATTCTTCGTGATTCTCACGGTATTGCTCAGGTCAAGAGTGTTACTGGCAATAAGATCTTGCGCATTCTTAAAGCTCATGGTATTGTACTTGTTCTTCTTGTTCATCAATTCGAAATTTTATGTTAATACAGGAGAGATAATTTTTGGGATAGATATGGAAGATTGAGTATATGTTAATGTATTAGTTTTTGGTTTTAGCTGTTGTGGTAATTGAATGTGTGTTTTTTTTATTACTATCAAAAGGGCTTGCTCCGGAGATTCCTGAGGATCTCTACCATTTGATTAAGAAGGCTGTCTCGATTAGAAAGCATTTGGAAAGGAACAGGAAGGACAAAGACTCCAAGTTCAGGTTGATTCTTGTGGAGAGCAGGATTCACCGGCTAGCTCGCTACTACAAGAAGACCAAGAAGCTCCCACCTGTTTGGAAATAGTAAGTGGTCGCTGATTTATTCTCTGTAGTTTATTTTGATATCTAATATCTATATTGTAACTTTAAGCTTGTTGTTACTAATTATTAGGGTGGATTTAAATTGCCTTACTTTTCCAAAGCATTTTATTTCTTAGTGAATCACATTAAAGAAATAGTACTTTTCACTACATGTAGGATCTGTTATATAGGTTGGATAATTGTGTCCTTGAGTTCTAAGAAATGTTACTTGAAGTTTAGTTCGTTCCTATTCAATAACTTACAACTATCACCTTCCCTTCCCAGTGATTGATTGGTTGATTTTTTTCTTCTTGTTTCAGCGAGTCAACTACTGCTAGCACACTTGTTGCTTGATTTTGTCAACTGATGGATTTATGGGCGATTAAGATCTTTTCATTTACTCTATTCGATGTAAGGTATTTCCATTGTGTGGTTCTAGATTAGACATTGAATTGTTCCAAGGTATCACAGAAACATAGTGCTCAATTTTTGTCATTCTCATCATGATTTTGTAGTTTCTTCCTTGTCTAAATTGGACATGATAGTGTTTTTGTCTTTAATTATAATTGATATTCCTCCGAA GGTTTTTCGTGAGGCTCGTCGATTACGGTTGAGGCCATTGCCATTTTTCTGAAGCAGACAGAGCTTTTGCATCTCCTCCATAGTCGTCTACAATGGGGCGTATGCACAGCAGAGGGAAAGGTATTTCAGCTTCAGCATTGCCGTACAAGAGGACTCCACCCAGTTGGCTTAAGATTTCTACTCAAGATGTTGAGGAAAACATCTGCAAATTTGCGAAGAAGGGTTTGACTCCGTCTCAGATCGGTGTCATTCTTCGTGATTCTCACGGTATTGCTCAGGTCAAGAGTGTTACTGGCAATAAGATCTTGCGCATTCTTAAAGCTCATGGGCTTGCTCCGGAGATTCCTGAGGATCTCTACCATTTGATTAAGAAGGCTGTCTCGATTAGAAAGCATTTGGAAAGGAACAGGAAGGACAAAGACTCCAAGTTCAGGTTGATTCTTGTGGAGAGCAGGATTCACCGGCTAGCTCGCTACTACAAGAAGACCAAGAAGCTCCCACCTGTTTGGAAATACGAGTCAACTACTGCTAGCACACTTGTTGCTTGATTTTGTCAACTGATGGATTTATGGGCGATTAAGATCTTTTCATTTACTCTATTCGATGTAAGGTATTTCCATTGTGTGGTTCTAGATTAGACATTGAATTGTTCCAAGGTATCACAGAAACATAGTGCTCAATTTTTGTCATTCTCATCATGATTTTGTAGTTTCTTCCTTGTCTAAATTGGACATGATAGTGTTTTTGTCTTTAATTATAATTGATATTCCTCCGAA ATGGGGCGTATGCACAGCAGAGGGAAAGGTATTTCAGCTTCAGCATTGCCGTACAAGAGGACTCCACCCAGTTGGCTTAAGATTTCTACTCAAGATGTTGAGGAAAACATCTGCAAATTTGCGAAGAAGGGTTTGACTCCGTCTCAGATCGGTGTCATTCTTCGTGATTCTCACGGTATTGCTCAGGTCAAGAGTGTTACTGGCAATAAGATCTTGCGCATTCTTAAAGCTCATGGGCTTGCTCCGGAGATTCCTGAGGATCTCTACCATTTGATTAAGAAGGCTGTCTCGATTAGAAAGCATTTGGAAAGGAACAGGAAGGACAAAGACTCCAAGTTCAGGTTGATTCTTGTGGAGAGCAGGATTCACCGGCTAGCTCGCTACTACAAGAAGACCAAGAAGCTCCCACCTGTTTGGAAATACGAGTCAACTACTGCTAGCACACTTGTTGCTTGA MGRMHSRGKGISASALPYKRTPPSWLKISTQDVEENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGNKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA Homology
BLAST of IVF0016811 vs. ExPASy Swiss-Prot
Match: P62302 (40S ribosomal protein S13 OS=Glycine max OX=3847 GN=RPS13 PE=2 SV=1) HSP 1 Score: 295.4 bits (755), Expect = 3.6e-79 Identity = 147/151 (97.35%), Postives = 150/151 (99.34%), Query Frame = 0
BLAST of IVF0016811 vs. ExPASy Swiss-Prot
Match: P59224 (40S ribosomal protein S13-2 OS=Arabidopsis thaliana OX=3702 GN=RPS13B PE=2 SV=1) HSP 1 Score: 284.6 bits (727), Expect = 6.3e-76 Identity = 141/151 (93.38%), Postives = 148/151 (98.01%), Query Frame = 0
BLAST of IVF0016811 vs. ExPASy Swiss-Prot
Match: P59223 (40S ribosomal protein S13-1 OS=Arabidopsis thaliana OX=3702 GN=RPS13A PE=2 SV=1) HSP 1 Score: 283.9 bits (725), Expect = 1.1e-75 Identity = 141/151 (93.38%), Postives = 147/151 (97.35%), Query Frame = 0
BLAST of IVF0016811 vs. ExPASy Swiss-Prot
Match: P46298 (40S ribosomal protein S13 OS=Pisum sativum OX=3888 GN=RPS13 PE=2 SV=1) HSP 1 Score: 283.9 bits (725), Expect = 1.1e-75 Identity = 141/151 (93.38%), Postives = 148/151 (98.01%), Query Frame = 0
BLAST of IVF0016811 vs. ExPASy Swiss-Prot
Match: Q69UI1 (40S ribosomal protein S13-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0117300 PE=1 SV=1) HSP 1 Score: 263.5 bits (672), Expect = 1.5e-69 Identity = 132/151 (87.42%), Postives = 138/151 (91.39%), Query Frame = 0
BLAST of IVF0016811 vs. ExPASy TrEMBL
Match: A0A6J1HJQ7 (40S ribosomal protein S13-like OS=Cucurbita maxima OX=3661 GN=LOC111465133 PE=3 SV=1) HSP 1 Score: 302.0 bits (772), Expect = 1.4e-78 Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0
BLAST of IVF0016811 vs. ExPASy TrEMBL
Match: A0A5D3D7D6 (40S ribosomal protein S13 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold443G001340 PE=3 SV=1) HSP 1 Score: 302.0 bits (772), Expect = 1.4e-78 Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0
BLAST of IVF0016811 vs. ExPASy TrEMBL
Match: A0A6J1E645 (40S ribosomal protein S13-like OS=Cucurbita moschata OX=3662 GN=LOC111431137 PE=3 SV=1) HSP 1 Score: 302.0 bits (772), Expect = 1.4e-78 Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0
BLAST of IVF0016811 vs. ExPASy TrEMBL
Match: A0A1S3BLF5 (40S ribosomal protein S13 OS=Cucumis melo OX=3656 GN=LOC103490930 PE=3 SV=1) HSP 1 Score: 302.0 bits (772), Expect = 1.4e-78 Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0
BLAST of IVF0016811 vs. ExPASy TrEMBL
Match: M5WJE0 (Ribosomal_S13_N domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_4G286400 PE=3 SV=1) HSP 1 Score: 300.1 bits (767), Expect = 5.4e-78 Identity = 150/151 (99.34%), Postives = 151/151 (100.00%), Query Frame = 0
BLAST of IVF0016811 vs. NCBI nr
Match: XP_008448906.1 (PREDICTED: 40S ribosomal protein S13 [Cucumis melo] >XP_022923442.1 40S ribosomal protein S13-like [Cucurbita moschata] >XP_022965207.1 40S ribosomal protein S13-like [Cucurbita maxima] >KAG6577599.1 40S ribosomal protein S13, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015648.1 40S ribosomal protein S13 [Cucurbita argyrosperma subsp. argyrosperma] >TYK19479.1 40S ribosomal protein S13 [Cucumis melo var. makuwa]) HSP 1 Score: 298 bits (764), Expect = 5.67e-102 Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0
BLAST of IVF0016811 vs. NCBI nr
Match: XP_038876810.1 (40S ribosomal protein S13-like [Benincasa hispida]) HSP 1 Score: 297 bits (761), Expect = 1.63e-101 Identity = 150/151 (99.34%), Postives = 151/151 (100.00%), Query Frame = 0
BLAST of IVF0016811 vs. NCBI nr
Match: XP_028805045.1 (40S ribosomal protein S13 [Prosopis alba] >KAF7826011.1 40S ribosomal protein S13 [Senna tora] >KAF7844799.1 40S ribosomal protein S13 [Senna tora]) HSP 1 Score: 297 bits (760), Expect = 2.31e-101 Identity = 150/151 (99.34%), Postives = 151/151 (100.00%), Query Frame = 0
BLAST of IVF0016811 vs. NCBI nr
Match: XP_007212197.1 (40S ribosomal protein S13 [Prunus persica] >XP_008227708.1 PREDICTED: 40S ribosomal protein S13 [Prunus mume] >XP_008232649.1 PREDICTED: 40S ribosomal protein S13 [Prunus mume] >XP_008372699.1 40S ribosomal protein S13 [Malus domestica] >XP_009338104.1 PREDICTED: 40S ribosomal protein S13 [Pyrus x bretschneideri] >XP_016648829.1 PREDICTED: 40S ribosomal protein S13 [Prunus mume] >XP_021804993.1 40S ribosomal protein S13 [Prunus avium] >XP_021813482.1 40S ribosomal protein S13 [Prunus avium] >XP_021813483.1 40S ribosomal protein S13 [Prunus avium] >XP_028955924.1 40S ribosomal protein S13 [Malus domestica] >XP_034205990.1 40S ribosomal protein S13 [Prunus dulcis] >XP_034213687.1 40S ribosomal protein S13 [Prunus dulcis] >KAB2595456.1 hypothetical protein D8674_030906 [Pyrus ussuriensis x Pyrus communis] >PQM35586.1 40S ribosomal protein S13 [Prunus yedoensis var. nudiflora] >TQD84804.1 hypothetical protein C1H46_029652 [Malus baccata] >CAB4269738.1 unnamed protein product [Prunus armeniaca] >KAB2595477.1 hypothetical protein D8674_030927 [Pyrus ussuriensis x Pyrus communis]) HSP 1 Score: 296 bits (759), Expect = 3.28e-101 Identity = 150/151 (99.34%), Postives = 151/151 (100.00%), Query Frame = 0
BLAST of IVF0016811 vs. NCBI nr
Match: XP_021909648.1 (40S ribosomal protein S13 [Carica papaya]) HSP 1 Score: 296 bits (757), Expect = 6.63e-101 Identity = 149/151 (98.68%), Postives = 151/151 (100.00%), Query Frame = 0
BLAST of IVF0016811 vs. TAIR 10
Match: AT4G00100.1 (ribosomal protein S13A ) HSP 1 Score: 284.6 bits (727), Expect = 4.5e-77 Identity = 141/151 (93.38%), Postives = 148/151 (98.01%), Query Frame = 0
BLAST of IVF0016811 vs. TAIR 10
Match: AT3G60770.1 (Ribosomal protein S13/S15 ) HSP 1 Score: 283.9 bits (725), Expect = 7.7e-77 Identity = 141/151 (93.38%), Postives = 147/151 (97.35%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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