IVF0016750 (gene) Melon (IVF77) v1

Overview
NameIVF0016750
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionNBS-LRR type resistance protein
Locationchr08: 10689499 .. 10690005 (+)
RNA-Seq ExpressionIVF0016750
SyntenyIVF0016750
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACGGCCGAAAGAGGGACGTACGATGACGAAAGCGAGCGTTTTAAATCGGTTCTTCTAGGTTGCGTCGGATGGCGTACGGAGGAGAAGGAAGTTGGCGAAGGCGGCGATTGGACTGAAGAAGAACGCACGATTGAAGGTAGAGACGGTCGGCAGTCGACTGGTCGCGTGAGACAGAGAGGAGTATCGGAAATGGGGCGGCTGCGAACGGTTGTATGTTGGCGTTGCGAGGCGGACGACAATGGAGATGGAGAGACTACCACAGAGACGGAGACGGATGCGGCTGTGTGTCGAAATGAAGAGAAATGGAGTTCGGAGGAGCGTGGCGTGGTCGGCTATCGGGTGAAGAAAATAAAGAAGAAGAAGAATCGGGAGAGCGGCGCGCGCGGGCTTAGGGTTTTCTTTTTTAAAAAAAAGAATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATGTATATATATATATATAATATAA

mRNA sequence

ATGACGGCCGAAAGAGGGACGTACGATGACGAAAGCGAGCGTTTTAAATCGGTTCTTCTAGGTTGCGTCGGATGGCGTACGGAGGAGAAGGAAGTTGGCGAAGGCGGCGATTGGACTGAAGAAGAACGCACGATTGAAGGTAGAGACGGTCGGCAGTCGACTGGTCGCGTGAGACAGAGAGGAGTATCGGAAATGGGGCGGCTGCGAACGGTTGTATGTTGGCGTTGCGAGGCGGACGACAATGGAGATGGAGAGACTACCACAGAGACGGAGACGGATGCGGCTGTGTGTCGAAATGAAGAGAAATGGAGTTCGGAGGAGCGTGGCGTGGTCGGCTATCGGGTGAAGAAAATAAAGAAGAAGAAGAATCGGGAGAGCGGCGCGCGCGGGCTTAGGGTTTTCTTTTTTAAAAAAAAGAATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATGTATATATATATATATAATATAA

Coding sequence (CDS)

ATGACGGCCGAAAGAGGGACGTACGATGACGAAAGCGAGCGTTTTAAATCGGTTCTTCTAGGTTGCGTCGGATGGCGTACGGAGGAGAAGGAAGTTGGCGAAGGCGGCGATTGGACTGAAGAAGAACGCACGATTGAAGGTAGAGACGGTCGGCAGTCGACTGGTCGCGTGAGACAGAGAGGAGTATCGGAAATGGGGCGGCTGCGAACGGTTGTATGTTGGCGTTGCGAGGCGGACGACAATGGAGATGGAGAGACTACCACAGAGACGGAGACGGATGCGGCTGTGTGTCGAAATGAAGAGAAATGGAGTTCGGAGGAGCGTGGCGTGGTCGGCTATCGGGTGAAGAAAATAAAGAAGAAGAAGAATCGGGAGAGCGGCGCGCGCGGGCTTAGGGTTTTCTTTTTTAAAAAAAAGAATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATGTATATATATATATATAATATAA

Protein sequence

MTAERGTYDDESERFKSVLLGCVGWRTEEKEVGEGGDWTEEERTIEGRDGRQSTGRVRQRGVSEMGRLRTVVCWRCEADDNGDGETTTETETDAAVCRNEEKWSSEERGVVGYRVKKIKKKKNRESGARGLRVFFFKKKNIYIYIYIYIYIYIYIYIYIYICIYIYII
Homology
BLAST of IVF0016750 vs. ExPASy TrEMBL
Match: A0A5A7SIC6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34G002290 PE=4 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 6.0e-54
Identity = 108/111 (97.30%), Postives = 109/111 (98.20%), Query Frame = 0

Query: 1   MTAERGTYDDESERFKSVLLGCVGWRTEEKEVGEGGDWTEEERTIEGRDGRQSTGRVRQR 60
           MTAERGTYDDESERFKSVLLGCVGWRTEEKEVGEGGDWTEEERTIEGRD RQSTGRVRQR
Sbjct: 1   MTAERGTYDDESERFKSVLLGCVGWRTEEKEVGEGGDWTEEERTIEGRDDRQSTGRVRQR 60

Query: 61  GVSEMGRLRTVVCWRCEADDNGDGETTTETETDAAVCRNEEKWSSEERGVV 112
           GVSEMGRLRTVV WRCEADDNGDGETTTETETDAAVCRNEEKWSSEERGV+
Sbjct: 61  GVSEMGRLRTVVRWRCEADDNGDGETTTETETDAAVCRNEEKWSSEERGVI 111

BLAST of IVF0016750 vs. ExPASy TrEMBL
Match: A0A5D3DSD7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G00250 PE=4 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 1.2e-30
Identity = 73/100 (73.00%), Postives = 81/100 (81.00%), Query Frame = 0

Query: 21  GCVGWRTEEKEVGEGGDWTEEERTIEGRDGRQSTGRVRQRGVSEMGRLRTVVCWRCEADD 80
           GCVGWRTEEKEVGEG DW EEE+ IEGRDGRQSTG VRQRG SEMGR RT VCWRCEADD
Sbjct: 68  GCVGWRTEEKEVGEGSDWIEEEQAIEGRDGRQSTGCVRQRGGSEMGRPRTTVCWRCEADD 127

Query: 81  NGDGETTTETETDAAVCRNEEKWSSEERGVVGYRVKKIKK 121
             DGETTTETE +AAVCRNEE+W  +   +  Y +K+ K+
Sbjct: 128 FRDGETTTETEMEAAVCRNEEQWRKKSTSL--YIMKEWKQ 165

BLAST of IVF0016750 vs. ExPASy TrEMBL
Match: A0A5D3DWA2 (NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold749G00010 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 1.9e-23
Identity = 57/67 (85.07%), Postives = 61/67 (91.04%), Query Frame = 0

Query: 2   TAERGTYDDESERFKSVLLGCVGWRTEEKEVGEGGDWTEEERTIEGRDGRQSTGRVRQRG 61
           T ERGTYD ESE FK VLLGCVGWRTEEKE+G+GGDWTEEER IEGRDG+QSTGRVR+RG
Sbjct: 102 TTERGTYDGESEHFKLVLLGCVGWRTEEKELGKGGDWTEEERAIEGRDGQQSTGRVRKRG 161

Query: 62  VSEMGRL 69
            SEMGRL
Sbjct: 162 GSEMGRL 168

BLAST of IVF0016750 vs. ExPASy TrEMBL
Match: A0A5A7V8M5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G003790 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 3.3e-20
Identity = 56/79 (70.89%), Postives = 62/79 (78.48%), Query Frame = 0

Query: 23  VGWRTEEKEVGEGGDWTEEERTIEGRDGRQSTGRVRQRGVSEMGRLRTVVCWRCEADDNG 82
           + W T+EKEVG GGDWTEEER IEGRDGRQSTG VRQRG SEMGR R  V WRC+A+D+G
Sbjct: 76  IRWHTKEKEVGGGGDWTEEERAIEGRDGRQSTGCVRQRGGSEMGRPRMAVRWRCDANDDG 135

Query: 83  DGETTTETETDAAVCRNEE 102
           D ETTT TET AA  +  E
Sbjct: 136 DRETTTVTETRAACVKLRE 154

BLAST of IVF0016750 vs. ExPASy TrEMBL
Match: A0A5A7U0Y9 (NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold133G001840 PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 4.8e-19
Identity = 51/63 (80.95%), Postives = 53/63 (84.13%), Query Frame = 0

Query: 2   TAERGTYDDESERFKSVLLGCVGWRTEEKEVGEGGDWTEEERTIEGRDGRQSTGRVRQRG 61
           TAERGTYD E+E+  SVLLGCVGWRTEEKEVG GGDWTEEER IEGRDGRQST  VRQ G
Sbjct: 79  TAERGTYDGENEQLTSVLLGCVGWRTEEKEVGGGGDWTEEERAIEGRDGRQSTSCVRQXG 138

Query: 62  VSE 65
             E
Sbjct: 139 ACE 141

BLAST of IVF0016750 vs. NCBI nr
Match: KAA0025928.1 (uncharacterized protein E6C27_scaffold34G002290 [Cucumis melo var. makuwa])

HSP 1 Score: 221 bits (562), Expect = 6.86e-71
Identity = 108/111 (97.30%), Postives = 109/111 (98.20%), Query Frame = 0

Query: 1   MTAERGTYDDESERFKSVLLGCVGWRTEEKEVGEGGDWTEEERTIEGRDGRQSTGRVRQR 60
           MTAERGTYDDESERFKSVLLGCVGWRTEEKEVGEGGDWTEEERTIEGRD RQSTGRVRQR
Sbjct: 1   MTAERGTYDDESERFKSVLLGCVGWRTEEKEVGEGGDWTEEERTIEGRDDRQSTGRVRQR 60

Query: 61  GVSEMGRLRTVVCWRCEADDNGDGETTTETETDAAVCRNEEKWSSEERGVV 111
           GVSEMGRLRTVV WRCEADDNGDGETTTETETDAAVCRNEEKWSSEERGV+
Sbjct: 61  GVSEMGRLRTVVRWRCEADDNGDGETTTETETDAAVCRNEEKWSSEERGVI 111

BLAST of IVF0016750 vs. NCBI nr
Match: TYK26464.1 (hypothetical protein E5676_scaffold313G00250 [Cucumis melo var. makuwa])

HSP 1 Score: 145 bits (365), Expect = 4.64e-40
Identity = 70/83 (84.34%), Postives = 73/83 (87.95%), Query Frame = 0

Query: 21  GCVGWRTEEKEVGEGGDWTEEERTIEGRDGRQSTGRVRQRGVSEMGRLRTVVCWRCEADD 80
           GCVGWRTEEKEVGEG DW EEE+ IEGRDGRQSTG VRQRG SEMGR RT VCWRCEADD
Sbjct: 68  GCVGWRTEEKEVGEGSDWIEEEQAIEGRDGRQSTGCVRQRGGSEMGRPRTTVCWRCEADD 127

Query: 81  NGDGETTTETETDAAVCRNEEKW 103
             DGETTTETE +AAVCRNEE+W
Sbjct: 128 FRDGETTTETEMEAAVCRNEEQW 150

BLAST of IVF0016750 vs. NCBI nr
Match: TYK27784.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa])

HSP 1 Score: 118 bits (295), Expect = 3.71e-30
Identity = 57/67 (85.07%), Postives = 61/67 (91.04%), Query Frame = 0

Query: 2   TAERGTYDDESERFKSVLLGCVGWRTEEKEVGEGGDWTEEERTIEGRDGRQSTGRVRQRG 61
           T ERGTYD ESE FK VLLGCVGWRTEEKE+G+GGDWTEEER IEGRDG+QSTGRVR+RG
Sbjct: 102 TTERGTYDGESEHFKLVLLGCVGWRTEEKELGKGGDWTEEERAIEGRDGQQSTGRVRKRG 161

Query: 62  VSEMGRL 68
            SEMGRL
Sbjct: 162 GSEMGRL 168

BLAST of IVF0016750 vs. NCBI nr
Match: KAA0062041.1 (hypothetical protein E6C27_scaffold89G003790 [Cucumis melo var. makuwa])

HSP 1 Score: 108 bits (270), Expect = 2.87e-25
Identity = 55/76 (72.37%), Postives = 61/76 (80.26%), Query Frame = 0

Query: 23  VGWRTEEKEVGEGGDWTEEERTIEGRDGRQSTGRVRQRGVSEMGRLRTVVCWRCEADDNG 82
           + W T+EKEVG GGDWTEEER IEGRDGRQSTG VRQRG SEMGR R  V WRC+A+D+G
Sbjct: 76  IRWHTKEKEVGGGGDWTEEERAIEGRDGRQSTGCVRQRGGSEMGRPRMAVRWRCDANDDG 135

Query: 83  DGETTTETETDAAVCR 98
           D ETTT TET AA  +
Sbjct: 136 DRETTTVTETRAACVK 151

BLAST of IVF0016750 vs. NCBI nr
Match: KAA0047906.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa])

HSP 1 Score: 103 bits (257), Expect = 1.28e-24
Identity = 51/63 (80.95%), Postives = 53/63 (84.13%), Query Frame = 0

Query: 2   TAERGTYDDESERFKSVLLGCVGWRTEEKEVGEGGDWTEEERTIEGRDGRQSTGRVRQRG 61
           TAERGTYD E+E+  SVLLGCVGWRTEEKEVG GGDWTEEER IEGRDGRQST  VRQ G
Sbjct: 79  TAERGTYDGENEQLTSVLLGCVGWRTEEKEVGGGGDWTEEERAIEGRDGRQSTSCVRQXG 138

Query: 62  VSE 64
             E
Sbjct: 139 ACE 141

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7SIC66.0e-5497.30Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3DSD71.2e-3073.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3DWA21.9e-2385.07NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
A0A5A7V8M53.3e-2070.89Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7U0Y94.8e-1980.95NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... [more]
Match NameE-valueIdentityDescription
KAA0025928.16.86e-7197.30uncharacterized protein E6C27_scaffold34G002290 [Cucumis melo var. makuwa][more]
TYK26464.14.64e-4084.34hypothetical protein E5676_scaffold313G00250 [Cucumis melo var. makuwa][more]
TYK27784.13.71e-3085.07NBS-LRR type resistance protein [Cucumis melo var. makuwa][more]
KAA0062041.12.87e-2572.37hypothetical protein E6C27_scaffold89G003790 [Cucumis melo var. makuwa][more]
KAA0047906.11.28e-2480.95NBS-LRR type resistance protein [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 31..62
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 31..55

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0016750.1IVF0016750.1mRNA