IVF0016735 (gene) Melon (IVF77) v1

Overview
NameIVF0016735
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Locationchr06: 12814374 .. 12814813 (+)
RNA-Seq ExpressionIVF0016735
SyntenyIVF0016735
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTCCCTCTTGGGGTCAGGGAAAAATTCTTGCTCGGAAAAACGTCATGGGTATATGAGAGACATGGAACCATTATACAACTAATTCAAGAATCTTCAGATTACACAGTCTGCAAGGAGCAAGCAATCAAGAAATTGCGAGATATGGAGAGAAGAAATAAAATATTAATTCCCAAACCTCATACTTCAGAGACAGCAGAAGCAGCTCTGCAATTGCTGCATTTGGACATTTCTGAACCGGACTTTTATTGAAAAATGAGAATCCAAGGGGAATTTAATCTGAGATTGTGAATGAAGAGAGAAGGATTTAGTTCACCATTATTAGGGAATTGAGAACGATGAGAGTTCCAGTTTCGATTGAAGTGCGAAACAGCGTTCTGGGTTTGGAGTTGAAGATCATACCGATATACACCCATTTGTGTGGGCTAAATTTTTCTTAG

mRNA sequence

ATGTTCCCTCTTGGGGTCAGGGAAAAATTCTTGCTCGGAAAAACGTCATGGGTATATGAGAGACATGGAACCATTATACAACTAATTCAAGAATCTTCAGATTACACAGTCTGCAAGGAGCAAGCAATCAAGAAATTGCGAGATATGGAGAGAAGAAATAAAATATTAATTCCCAAACCTCATACTTCAGAGACAGCAGAATTCACCATTATTAGGGAATTGAGAACGATGAGAGTTCCAGTTTCGATTGAAGTGCGAAACAGCGTTCTGGGTTTGGAGTTGAAGATCATACCGATATACACCCATTTGTGTGGGCTAAATTTTTCTTAG

Coding sequence (CDS)

ATGTTCCCTCTTGGGGTCAGGGAAAAATTCTTGCTCGGAAAAACGTCATGGGTATATGAGAGACATGGAACCATTATACAACTAATTCAAGAATCTTCAGATTACACAGTCTGCAAGGAGCAAGCAATCAAGAAATTGCGAGATATGGAGAGAAGAAATAAAATATTAATTCCCAAACCTCATACTTCAGAGACAGCAGAATTCACCATTATTAGGGAATTGAGAACGATGAGAGTTCCAGTTTCGATTGAAGTGCGAAACAGCGTTCTGGGTTTGGAGTTGAAGATCATACCGATATACACCCATTTGTGTGGGCTAAATTTTTCTTAG

Protein sequence

MFPLGVREKFLLGKTSWVYERHGTIIQLIQESSDYTVCKEQAIKKLRDMERRNKILIPKPHTSETAEFTIIRELRTMRVPVSIEVRNSVLGLELKIIPIYTHLCGLNFS
Homology
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BLAST of IVF0016735 vs. ExPASy TrEMBL
Match: A0A0A0LC19 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G598930 PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 3.3e-29
Identity = 84/140 (60.00%), Postives = 86/140 (61.43%), Query Frame = 0 

Query: 1   MFPLGVREKFLLGKTSWVYERHGTIIQLIQESSDYTVCKEQAIKKLRDMERRNKILIP-- 60
           MFPLGVR  FLLGKTSWVYERHGTIIQ IQE S Y VCKE+AIKKL DMERRNK L P  
Sbjct: 1   MFPLGVRGIFLLGKTSWVYERHGTIIQQIQECSAYEVCKEEAIKKLGDMERRNKRLFPNL 60

Query: 61  --------------------------KPHTSE---TAEFTIIRELRTMRVPVSIEVRNSV 110
                                      P   E     +F IIR LR MRVPV IEV NSV
Sbjct: 61  KLERQKKQLCNCCIWRYLNRTSIENENPRGIECERRIQFRIIRGLRRMRVPVPIEVGNSV 120

The following BLAST results are available for this feature:
BLAST of IVF0016735 vs.
Match NameE-valueIdentityDescription
BLAST of IVF0016735 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LC193.3e-2960.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G598930 PE=4 SV=1[more]
BLAST of IVF0016735 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
BLAST of IVF0016735 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0016735.2IVF0016735.2mRNA