IVF0016730 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTCGGCTCAGCTCCGCTCGTGACTGGGCTCAGTTCTCAGCTTGGTTCGCGGCTCAGTTTGGTTCAGCTCGCGGCTCACAGTTTGGTCCGACTTGGTTGGCTCGGTTCGAACCGCTTGAAGCTGAGGCAACCACGAACGGCTGGTTTCCGAGTCTAGGACGACGGTGGACGTTTCACAGATGATAGGCGAAGCGACAACAGATCGGAAATGGAGGGGTGGCCCGCTCGACTAAGGGCAGAAGCGGCCAACAGCCACTCGGGTACACGAGGTAGAGAGAGAACGTCAGAGATGGAGGAGCTTGCAAACGATCAGATGGCCGGTCTGGAGGACTCGTCGGTGGTTGACTGTTCACTGGCTGAAGACGGAAACGTGCAGATGCAGTCGGTTGAATGA ATGGCTCGGCTCAGCTCCGCTCGTGACTGGGCTCAGTTCTCAGCTTGGTTCGCGGCTCAGTTTGGTTCAGCTCGCGGCTCACAGTTTGATGATAGGCGAAGCGACAACAGATCGGAAATGGAGGGGTGGCCCGCTCGACTAAGGGCAGAAGCGGCCAACAGCCACTCGGGTACACGAGGTAGAGAGAGAACGTCAGAGATGGAGGAGCTTGCAAACGATCAGATGGCCGGTCTGGAGGACTCGTCGGTGGTTGACTGTTCACTGGCTGAAGACGGAAACGTGCAGATGCAGTCGGTTGAATGA ATGGCTCGGCTCAGCTCCGCTCGTGACTGGGCTCAGTTCTCAGCTTGGTTCGCGGCTCAGTTTGGTTCAGCTCGCGGCTCACAGTTTGATGATAGGCGAAGCGACAACAGATCGGAAATGGAGGGGTGGCCCGCTCGACTAAGGGCAGAAGCGGCCAACAGCCACTCGGGTACACGAGGTAGAGAGAGAACGTCAGAGATGGAGGAGCTTGCAAACGATCAGATGGCCGGTCTGGAGGACTCGTCGGTGGTTGACTGTTCACTGGCTGAAGACGGAAACGTGCAGATGCAGTCGGTTGAATGA MARLSSARDWAQFSAWFAAQFGSARGSQFDDRRSDNRSEMEGWPARLRAEAANSHSGTRGRERTSEMEELANDQMAGLEDSSVVDCSLAEDGNVQMQSVE Homology
BLAST of IVF0016730 vs. ExPASy TrEMBL
Match: A0A5D3DUZ1 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold478G00110 PE=4 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 5.2e-13 Identity = 47/75 (62.67%), Postives = 57/75 (76.00%), Query Frame = 0
BLAST of IVF0016730 vs. ExPASy TrEMBL
Match: A0A5A7V1G1 (NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G002980 PE=4 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 3.6e-06 Identity = 31/39 (79.49%), Postives = 35/39 (89.74%), Query Frame = 0
BLAST of IVF0016730 vs. ExPASy TrEMBL
Match: A0A5D3DUE6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold478G00090 PE=4 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 4.4e-04 Identity = 27/39 (69.23%), Postives = 33/39 (84.62%), Query Frame = 0
BLAST of IVF0016730 vs. NCBI nr
Match: KAA0063703.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK27120.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 83.2 bits (204), Expect = 1.98e-16 Identity = 45/70 (64.29%), Postives = 54/70 (77.14%), Query Frame = 0
BLAST of IVF0016730 vs. NCBI nr
Match: KAA0061993.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa]) HSP 1 Score: 60.1 bits (144), Expect = 1.37e-08 Identity = 31/39 (79.49%), Postives = 35/39 (89.74%), Query Frame = 0
BLAST of IVF0016730 vs. NCBI nr
Match: TYK27118.1 (hypothetical protein E5676_scaffold478G00090 [Cucumis melo var. makuwa]) HSP 1 Score: 53.5 bits (127), Expect = 8.52e-06 Identity = 25/34 (73.53%), Postives = 30/34 (88.24%), Query Frame = 0
BLAST of IVF0016730 vs. NCBI nr
Match: TYJ95737.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa]) HSP 1 Score: 49.7 bits (117), Expect = 1.96e-04 Identity = 27/53 (50.94%), Postives = 34/53 (64.15%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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