Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATATATTCTCCACACCCCACCCTCTTTCTCTCTCACTCTCTCATGGAGGAATCGCGGAACACCCATGAGTTTGTTCGGACCGAGGCGTCCACGGAGAAGAGGCAGCGACCTGCCGCCGAGGATATGGACGACGACATTCTGGCTTGGATTTCTTTGGAAGAAGAGACAGTAGGCGAACTCATGATGCTTCTGGACGATGAGGAGAAAAGCCGTCCGGTGGAGGAGAAAGTTAAGTTCATAGAGGATCCCTACTCATCGGCCGTGATTTTTCAATCCTCTTCGTCGTACGTGACTATCAACGGAAACGAAGAGAGTTGTGGTTCGTCTTTCTCTGAATCGGACTCGTCGATGATGGCGAGCGTCGACATGAACGGAGCAAGGATTAAAGTGATGGAAATCGATAGTGAAACTGTTGAGAAATGGAAGATGTGGAGCGAGAATGGGTTGATGAAGGAGGAAGAGGAAGAGGAGGTGTCGGGTGTATTGGACGGAATCATCAGTTGGGATGAAGATGATTTAGCGAGGTTCGTCGGCGATGAAGAACAGATAATCTGA
mRNA sequence
ATATATTCTCCACACCCCACCCTCTTTCTCTCTCACTCTCTCATGGAGGAATCGCGGAACACCCATGAGTTTGTTCGGACCGAGGCGTCCACGGAGAAGAGGCAGCGACCTGCCGCCGAGGATATGGACGACGACATTCTGGCTTGGATTTCTTTGGAAGAAGAGACAGTAGGCGAACTCATGATGCTTCTGGACGATGAGGAGAAAAGCCGTCCGGTGGAGGAGAAAGTTAAGTTCATAGAGGATCCCTACTCATCGGCCGTGATTTTTCAATCCTCTTCGTCGTACGTGACTATCAACGGAAACGAAGAGAGTTGTGGTTCGTCTTTCTCTGAATCGGACTCGTCGATGATGGCGAGCGTCGACATGAACGGAGCAAGGATTAAAGTGATGGAAATCGATAGTGAAACTGTTGAGAAATGGAAGATGTGGAGCGAGAATGGGTTGATGAAGGAGGAAGAGGAAGAGGAGGTGTCGGGTGTATTGGACGGAATCATCAGTTGGGATGAAGATGATTTAGCGAGGTTCGTCGGCGATGAAGAACAGATAATCTGA
Coding sequence (CDS)
ATGGAGGAATCGCGGAACACCCATGAGTTTGTTCGGACCGAGGCGTCCACGGAGAAGAGGCAGCGACCTGCCGCCGAGGATATGGACGACGACATTCTGGCTTGGATTTCTTTGGAAGAAGAGACAGTAGGCGAACTCATGATGCTTCTGGACGATGAGGAGAAAAGCCGTCCGGTGGAGGAGAAAGTTAAGTTCATAGAGGATCCCTACTCATCGGCCGTGATTTTTCAATCCTCTTCGTCGTACGTGACTATCAACGGAAACGAAGAGAGTTGTGGTTCGTCTTTCTCTGAATCGGACTCGTCGATGATGGCGAGCGTCGACATGAACGGAGCAAGGATTAAAGTGATGGAAATCGATAGTGAAACTGTTGAGAAATGGAAGATGTGGAGCGAGAATGGGTTGATGAAGGAGGAAGAGGAAGAGGAGGTGTCGGGTGTATTGGACGGAATCATCAGTTGGGATGAAGATGATTTAGCGAGGTTCGTCGGCGATGAAGAACAGATAATCTGA
Protein sequence
MEESRNTHEFVRTEASTEKRQRPAAEDMDDDILAWISLEEETVGELMMLLDDEEKSRPVEEKVKFIEDPYSSAVIFQSSSSYVTINGNEESCGSSFSESDSSMMASVDMNGARIKVMEIDSETVEKWKMWSENGLMKEEEEEEVSGVLDGIISWDEDDLARFVGDEEQII
Homology
BLAST of IVF0016615 vs. ExPASy TrEMBL
Match:
A0A5D3CG58 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G00940 PE=4 SV=1)
HSP 1 Score: 322.8 bits (826), Expect = 8.7e-85
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 0
Query: 1 MEESRNTHEFVRTEASTEKRQRPAAEDMDDDILAWISLEEETVGELMMLLDDEEKSRPVE 60
MEESRNTHEFVRTEASTEKRQRPAAEDMDDDILAWISLEEETVGELMMLLDDEEKSRPVE
Sbjct: 1 MEESRNTHEFVRTEASTEKRQRPAAEDMDDDILAWISLEEETVGELMMLLDDEEKSRPVE 60
Query: 61 EKVKFIEDPYSSAVIFQSSSSYVTINGNEESCGSSFSESDSSMMASVDMNGARIKVMEID 120
EKVKFIEDPYSSAVIFQSSSSYVTINGNEESCGSSFSESDSSMMASVDMNGARIKVMEID
Sbjct: 61 EKVKFIEDPYSSAVIFQSSSSYVTINGNEESCGSSFSESDSSMMASVDMNGARIKVMEID 120
Query: 121 SETVEKWKMWSENGLMKEEEEEEVSGVLDGIISWDEDDLARFVGDEEQII 171
SETVEKWKMWSENGLMKEEEEEEVSGVLDGIISWDEDDLARFVGDEEQII
Sbjct: 121 SETVEKWKMWSENGLMKEEEEEEVSGVLDGIISWDEDDLARFVGDEEQII 170
BLAST of IVF0016615 vs. ExPASy TrEMBL
Match:
A0A5A7UZZ9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold41G00520 PE=4 SV=1)
HSP 1 Score: 320.9 bits (821), Expect = 3.3e-84
Identity = 169/170 (99.41%), Postives = 170/170 (100.00%), Query Frame = 0
Query: 1 MEESRNTHEFVRTEASTEKRQRPAAEDMDDDILAWISLEEETVGELMMLLDDEEKSRPVE 60
MEESRNTHEFVRTEASTEKRQRPAAEDMDDDILAWISLEEETVGELMMLLDDEEKSRPVE
Sbjct: 1 MEESRNTHEFVRTEASTEKRQRPAAEDMDDDILAWISLEEETVGELMMLLDDEEKSRPVE 60
Query: 61 EKVKFIEDPYSSAVIFQSSSSYVTINGNEESCGSSFSESDSSMMASVDMNGARIKVMEID 120
EKVKFIEDPYSSAVIFQSSSSYVTINGNEESCGSSFSESDSSMMASVDMNGARIKVMEID
Sbjct: 61 EKVKFIEDPYSSAVIFQSSSSYVTINGNEESCGSSFSESDSSMMASVDMNGARIKVMEID 120
Query: 121 SETVEKWKMWSENGLMKEEEEEEVSGVLDGIISWDEDDLARFVGDEEQII 171
SETVEKWKMWSE+GLMKEEEEEEVSGVLDGIISWDEDDLARFVGDEEQII
Sbjct: 121 SETVEKWKMWSEDGLMKEEEEEEVSGVLDGIISWDEDDLARFVGDEEQII 170
BLAST of IVF0016615 vs. ExPASy TrEMBL
Match:
A0A1S3CB71 (uncharacterized protein LOC103498512 OS=Cucumis melo OX=3656 GN=LOC103498512 PE=4 SV=1)
HSP 1 Score: 320.9 bits (821), Expect = 3.3e-84
Identity = 169/170 (99.41%), Postives = 170/170 (100.00%), Query Frame = 0
Query: 1 MEESRNTHEFVRTEASTEKRQRPAAEDMDDDILAWISLEEETVGELMMLLDDEEKSRPVE 60
MEESRNTHEFVRTEASTEKRQRPAAEDMDDDILAWISLEEETVGELMMLLDDEEKSRPVE
Sbjct: 1 MEESRNTHEFVRTEASTEKRQRPAAEDMDDDILAWISLEEETVGELMMLLDDEEKSRPVE 60
Query: 61 EKVKFIEDPYSSAVIFQSSSSYVTINGNEESCGSSFSESDSSMMASVDMNGARIKVMEID 120
EKVKFIEDPYSSAVIFQSSSSYVTINGNEESCGSSFSESDSSMMASVDMNGARIKVMEID
Sbjct: 61 EKVKFIEDPYSSAVIFQSSSSYVTINGNEESCGSSFSESDSSMMASVDMNGARIKVMEID 120
Query: 121 SETVEKWKMWSENGLMKEEEEEEVSGVLDGIISWDEDDLARFVGDEEQII 171
SETVEKWKMWSE+GLMKEEEEEEVSGVLDGIISWDEDDLARFVGDEEQII
Sbjct: 121 SETVEKWKMWSEDGLMKEEEEEEVSGVLDGIISWDEDDLARFVGDEEQII 170
BLAST of IVF0016615 vs. ExPASy TrEMBL
Match:
A0A0A0LIN0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G000450 PE=4 SV=1)
HSP 1 Score: 273.5 bits (698), Expect = 6.1e-70
Identity = 147/167 (88.02%), Postives = 154/167 (92.22%), Query Frame = 0
Query: 1 MEESRNTHEFVRTEASTEKRQRPAAEDMDDDILAWISLEEETVGELMMLLDDEEKSRPVE 60
MEESR TH+FVRTEASTEK EDMDDDILAWISLE+ETVGELMMLLDDEEKSRPVE
Sbjct: 1 MEESRKTHDFVRTEASTEK-----TEDMDDDILAWISLEDETVGELMMLLDDEEKSRPVE 60
Query: 61 EKVKFIEDPYSSAVIFQSSSSYVTINGNEESCGSSFSESDSSMMASVDMNGARIKVMEID 120
EKVKFIEDPYSSAV+FQSSSSYVTINGNEESCGSSFSESDSSMMASVDMNGARIKVMEID
Sbjct: 61 EKVKFIEDPYSSAVVFQSSSSYVTINGNEESCGSSFSESDSSMMASVDMNGARIKVMEID 120
Query: 121 SETVEKWKMWSENGLMKEEEEEEVSGVLDGIISWDEDDLARFVGDEE 168
ETV+KWKMWSE LMK EEEEVSGV +GI+SWDEDDLARF+GDEE
Sbjct: 121 CETVDKWKMWSEERLMK--EEEEVSGVSEGIMSWDEDDLARFIGDEE 160
BLAST of IVF0016615 vs. ExPASy TrEMBL
Match:
A0A6J1HN50 (uncharacterized protein LOC111465706 OS=Cucurbita maxima OX=3661 GN=LOC111465706 PE=4 SV=1)
HSP 1 Score: 228.8 bits (582), Expect = 1.7e-56
Identity = 127/171 (74.27%), Postives = 143/171 (83.63%), Query Frame = 0
Query: 1 MEESRNTHEFVRTEASTEKRQRPAA--EDMDDDILAWISLEEETVGELMMLLDDEEKSRP 60
MEE+R H+FV E ST+KR R AA ED+ +DILAWIS+EEETVGELMMLLDD EKSRP
Sbjct: 1 MEETRKRHDFVPAENSTQKRPRAAAAVEDVGNDILAWISVEEETVGELMMLLDDAEKSRP 60
Query: 61 VEEKVKFIEDPYSSAVIFQSSSSYVTINGNEESCGSSFSESDSSMMASVDMNGARIKVME 120
+ EKVKFI+DPYSSA+IFQSSSS+VTINGNEESCGSSFSESDSS+MASVDMNGARIK+ME
Sbjct: 61 MAEKVKFIDDPYSSAMIFQSSSSFVTINGNEESCGSSFSESDSSVMASVDMNGARIKLME 120
Query: 121 IDSETVEKWKMWSENGLMKEEEEEEVSGVLDGIISWDEDDLARFVGDEEQI 170
IDS TVEKWK+W + EE S V +G SWDEDDLARF+GDEEQI
Sbjct: 121 IDSATVEKWKLW---------KTEEASSVSEG-FSWDEDDLARFIGDEEQI 161
BLAST of IVF0016615 vs. NCBI nr
Match:
TYK10781.1 (uncharacterized protein E5676_scaffold332G00940 [Cucumis melo var. makuwa])
HSP 1 Score: 321 bits (822), Expect = 3.40e-110
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 0
Query: 1 MEESRNTHEFVRTEASTEKRQRPAAEDMDDDILAWISLEEETVGELMMLLDDEEKSRPVE 60
MEESRNTHEFVRTEASTEKRQRPAAEDMDDDILAWISLEEETVGELMMLLDDEEKSRPVE
Sbjct: 1 MEESRNTHEFVRTEASTEKRQRPAAEDMDDDILAWISLEEETVGELMMLLDDEEKSRPVE 60
Query: 61 EKVKFIEDPYSSAVIFQSSSSYVTINGNEESCGSSFSESDSSMMASVDMNGARIKVMEID 120
EKVKFIEDPYSSAVIFQSSSSYVTINGNEESCGSSFSESDSSMMASVDMNGARIKVMEID
Sbjct: 61 EKVKFIEDPYSSAVIFQSSSSYVTINGNEESCGSSFSESDSSMMASVDMNGARIKVMEID 120
Query: 121 SETVEKWKMWSENGLMKEEEEEEVSGVLDGIISWDEDDLARFVGDEEQII 170
SETVEKWKMWSENGLMKEEEEEEVSGVLDGIISWDEDDLARFVGDEEQII
Sbjct: 121 SETVEKWKMWSENGLMKEEEEEEVSGVLDGIISWDEDDLARFVGDEEQII 170
BLAST of IVF0016615 vs. NCBI nr
Match:
XP_008459356.1 (PREDICTED: uncharacterized protein LOC103498512 [Cucumis melo] >KAA0061492.1 uncharacterized protein E6C27_scaffold41G00520 [Cucumis melo var. makuwa])
HSP 1 Score: 319 bits (817), Expect = 1.97e-109
Identity = 169/170 (99.41%), Postives = 170/170 (100.00%), Query Frame = 0
Query: 1 MEESRNTHEFVRTEASTEKRQRPAAEDMDDDILAWISLEEETVGELMMLLDDEEKSRPVE 60
MEESRNTHEFVRTEASTEKRQRPAAEDMDDDILAWISLEEETVGELMMLLDDEEKSRPVE
Sbjct: 1 MEESRNTHEFVRTEASTEKRQRPAAEDMDDDILAWISLEEETVGELMMLLDDEEKSRPVE 60
Query: 61 EKVKFIEDPYSSAVIFQSSSSYVTINGNEESCGSSFSESDSSMMASVDMNGARIKVMEID 120
EKVKFIEDPYSSAVIFQSSSSYVTINGNEESCGSSFSESDSSMMASVDMNGARIKVMEID
Sbjct: 61 EKVKFIEDPYSSAVIFQSSSSYVTINGNEESCGSSFSESDSSMMASVDMNGARIKVMEID 120
Query: 121 SETVEKWKMWSENGLMKEEEEEEVSGVLDGIISWDEDDLARFVGDEEQII 170
SETVEKWKMWSE+GLMKEEEEEEVSGVLDGIISWDEDDLARFVGDEEQII
Sbjct: 121 SETVEKWKMWSEDGLMKEEEEEEVSGVLDGIISWDEDDLARFVGDEEQII 170
BLAST of IVF0016615 vs. NCBI nr
Match:
XP_011648606.2 (uncharacterized protein LOC105434536 [Cucumis sativus] >KGN60561.2 hypothetical protein Csa_019291 [Cucumis sativus])
HSP 1 Score: 271 bits (694), Expect = 2.59e-90
Identity = 147/167 (88.02%), Postives = 154/167 (92.22%), Query Frame = 0
Query: 1 MEESRNTHEFVRTEASTEKRQRPAAEDMDDDILAWISLEEETVGELMMLLDDEEKSRPVE 60
MEESR TH+FVRTEASTEK EDMDDDILAWISLE+ETVGELMMLLDDEEKSRPVE
Sbjct: 36 MEESRKTHDFVRTEASTEK-----TEDMDDDILAWISLEDETVGELMMLLDDEEKSRPVE 95
Query: 61 EKVKFIEDPYSSAVIFQSSSSYVTINGNEESCGSSFSESDSSMMASVDMNGARIKVMEID 120
EKVKFIEDPYSSAV+FQSSSSYVTINGNEESCGSSFSESDSSMMASVDMNGARIKVMEID
Sbjct: 96 EKVKFIEDPYSSAVVFQSSSSYVTINGNEESCGSSFSESDSSMMASVDMNGARIKVMEID 155
Query: 121 SETVEKWKMWSENGLMKEEEEEEVSGVLDGIISWDEDDLARFVGDEE 167
ETV+KWKMWSE LMKEEEE VSGV +GI+SWDEDDLARF+GDEE
Sbjct: 156 CETVDKWKMWSEERLMKEEEE--VSGVSEGIMSWDEDDLARFIGDEE 195
BLAST of IVF0016615 vs. NCBI nr
Match:
XP_038890889.1 (uncharacterized protein LOC120080324 [Benincasa hispida])
HSP 1 Score: 256 bits (654), Expect = 1.32e-84
Identity = 143/172 (83.14%), Postives = 153/172 (88.95%), Query Frame = 0
Query: 1 MEESRNTHEFVRTEASTEKRQRPA---AEDMDDDILAWISLEEETVGELMMLLDDEEKSR 60
M+ESR HEFV EASTEKR R A AED+DDDILAWIS+EEETVGELMMLLDD EKSR
Sbjct: 1 MDESRKRHEFVPPEASTEKRPRVAVKEAEDVDDDILAWISVEEETVGELMMLLDDVEKSR 60
Query: 61 PVEEKVKFIEDPYSSAVIFQSSSSYVTINGNEESCGSSFSESDSSMMASVDMNGARIKVM 120
P+EEKVKFI+DPYSSAVIFQSSSSYVTINGNEESCGSSFSESDSSMMASVDMNGARIK+M
Sbjct: 61 PMEEKVKFIDDPYSSAVIFQSSSSYVTINGNEESCGSSFSESDSSMMASVDMNGARIKLM 120
Query: 121 EIDSETVEKWKMWSENGLMKEEEEEEVSGVLDGIISWDEDDLARFVGDEEQI 169
EIDSETVEKWK+WSE+ L +EEEE S VLDG WDEDDLARF+GDEEQI
Sbjct: 121 EIDSETVEKWKLWSEDRL---KEEEETSAVLDGFC-WDEDDLARFIGDEEQI 168
BLAST of IVF0016615 vs. NCBI nr
Match:
KAG6586479.1 (hypothetical protein SDJN03_19212, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021338.1 hypothetical protein SDJN02_18027, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 228 bits (581), Expect = 1.37e-73
Identity = 127/171 (74.27%), Postives = 143/171 (83.63%), Query Frame = 0
Query: 1 MEESRNTHEFVRTEASTEKRQRPAA--EDMDDDILAWISLEEETVGELMMLLDDEEKSRP 60
MEE+R H+FV E ST+KR R AA ED+ +DILAWIS+EEETVGELMMLLDD EKSRP
Sbjct: 1 MEETRKRHDFVPAENSTQKRPRAAAAVEDVGNDILAWISVEEETVGELMMLLDDAEKSRP 60
Query: 61 VEEKVKFIEDPYSSAVIFQSSSSYVTINGNEESCGSSFSESDSSMMASVDMNGARIKVME 120
+ EKVKFI+DPYSSA+IFQSSSS+VTINGNEESCGSSFSESDSS+MASVDMNGARIK+ME
Sbjct: 61 MAEKVKFIDDPYSSAMIFQSSSSFVTINGNEESCGSSFSESDSSVMASVDMNGARIKLME 120
Query: 121 IDSETVEKWKMWSENGLMKEEEEEEVSGVLDGIISWDEDDLARFVGDEEQI 169
IDS TVEKWK+W EEVS + +G SWDEDDLARF+GDEEQI
Sbjct: 121 IDSATVEKWKLWKS---------EEVSSISEGS-SWDEDDLARFIGDEEQI 161
BLAST of IVF0016615 vs. TAIR 10
Match:
AT5G56880.1 (unknown protein; Has 9 Blast hits to 9 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 9; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 77.4 bits (189), Expect = 1.2e-14
Identity = 55/140 (39.29%), Postives = 76/140 (54.29%), Query Frame = 0
Query: 39 EEETVGELMMLLDDEEKSRPVEE------------KVKFIEDPYSSAVIFQSSSSYVTIN 98
+E T E+M L++ + E +V+FI+DPY+ V+ QSSS Y+TIN
Sbjct: 33 DEYTPDEIMSLVESSSPTMTTTEIEGTNFSGEGSFRVRFIDDPYAMPVVVQSSSGYITIN 92
Query: 99 GNEESCGSSFSESDSSMMASVDMNGARIKVMEIDSETVEKWKMWSENGLMKEEEEEEVSG 158
NEESCG SFS+SDSS+MASVD +G E + EK WS N + E E
Sbjct: 93 VNEESCGPSFSDSDSSVMASVDASGLFGCCFEYGN---EKGGAWSTNEVRASEYE----- 152
Query: 159 VLDGIISWDEDDLARFVGDE 167
W++D LARF+G++
Sbjct: 153 -------WNDDMLARFLGED 157
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5D3CG58 | 8.7e-85 | 100.00 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A5A7UZZ9 | 3.3e-84 | 99.41 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A1S3CB71 | 3.3e-84 | 99.41 | uncharacterized protein LOC103498512 OS=Cucumis melo OX=3656 GN=LOC103498512 PE=... | [more] |
A0A0A0LIN0 | 6.1e-70 | 88.02 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G000450 PE=4 SV=1 | [more] |
A0A6J1HN50 | 1.7e-56 | 74.27 | uncharacterized protein LOC111465706 OS=Cucurbita maxima OX=3661 GN=LOC111465706... | [more] |
Match Name | E-value | Identity | Description | |
TYK10781.1 | 3.40e-110 | 100.00 | uncharacterized protein E5676_scaffold332G00940 [Cucumis melo var. makuwa] | [more] |
XP_008459356.1 | 1.97e-109 | 99.41 | PREDICTED: uncharacterized protein LOC103498512 [Cucumis melo] >KAA0061492.1 unc... | [more] |
XP_011648606.2 | 2.59e-90 | 88.02 | uncharacterized protein LOC105434536 [Cucumis sativus] >KGN60561.2 hypothetical ... | [more] |
XP_038890889.1 | 1.32e-84 | 83.14 | uncharacterized protein LOC120080324 [Benincasa hispida] | [more] |
KAG6586479.1 | 1.37e-73 | 74.27 | hypothetical protein SDJN03_19212, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
Match Name | E-value | Identity | Description | |
AT5G56880.1 | 1.2e-14 | 39.29 | unknown protein; Has 9 Blast hits to 9 proteins in 5 species: Archae - 0; Bacter... | [more] |