IVF0016524 (gene) Melon (IVF77) v1

Overview


Name	IVF0016524
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Transcription termination factor MTEF1
Location	tig00000060: 427164 .. 428513 (-)
RNA-Seq Expression	IVF0016524
Synteny	IVF0016524

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTTACTTGTTTCGCAGAATCCTTCTTCTTAGATCTCCATCCTCTGTCTTTTCTCACGGATTTTCCGAAAGCCCCTTGAAATCTCTCAGATTCTTATCTACCTCTTCTGAGATTGTATCATCTCCGAAATCTGCTTCGTTGGCCTCTAATGCTGTTCAGCTCGAGAATAATCGGAAGGCTGTAATTGAGTTACTTGCGAACCATGGATTCTCTCAATCACAAATCTCTGACATTGGCAGGAGGCGGCCTCAAATTCTTGCTGCGAACCCCGAGAAAATTCTATTGCCAAAATTGTTGTTTTTTCAATCTAAAGGTCTTTCTTCCCCAGAGATTGCCAAATTAGTATGTACATTTCCTTATGTCTTAACAGGAAGTTTAAACAAACGAATTATTTATAATTTTGATTACATTCAAGCCGTGCTTGGAAGTGAGGAGAAGACTCTCGCTGCCATAAAACAGTTTGCGGGTATTCTCGCTCGGGATCTTCAAATTTCAGTTGGTCCCAATATTGAAATTCTGAAACAAATTGGAGTGCCGGATTCAAATATTTTAAAATATCTTCAGTACCAGCCTAGAGTGTTCATAATAAGTTCCATCCGATTCAAGGAGATTGTAGAGAGAGTTACGGAAATGGGATTCAACCCTCAACGATTGCAGTTTCTTGTTGCTGTTTTTGCTCTGCGAGCAATGACCAAATCTACATGGGATAAGAAGGTTGAAGTTTATAGGAAATGGGGATTGTCTGAAGAAGAGATCTGTTTGGCTTTTAAAAGGCATCCATGGTGTATGATGGTTTCTGAGGATAAGATTAATGGTGCAATGGATTTTTTGTCAACAAAATTGGATGTGAATCATCTTTCGTTGCTAGAAGACCAGCTTTAATTTCACTTAGTTTGAAGAAGAGGCTTAATCCTAGAGGCTACGTTTATCAAGTTTTGCTGGAAAAGGGTTTGATTAAGAAGCAAGCGAACATTCCTTTGTTCGTAAGTTCTTCTGAAAAGCGTTTCATAGAAAAATTCATCAACCCTCATAAGGAGGAGCAGATTCCTGGATTGTTGGAGTTGTACAAACAGAAATTAATGGATTCTAGAAGATGAGCGGGTTCGATCTCCTTGAAACTTAACTGTTTTGTTAGTTGATATGTGTAGAGACAAACTAAATTTTCTATATGCGCAAGAGTTTGTGTTTCTACATTATCACTATTTAGATAGCTAATTGAATGATGACTCCTTAAGAACCGCTTTGCGCCAGGTATTTGGGTACTGTTCCTCTGCTTAACATTGTTGGAGTTATATTATCTGGGCATGGCTGTTTCTAGTTGGGTTGTCTTGAAGGGTTGTCGTGCAG

mRNA sequence

ATGTCTTACTTGTTTCGCAGAATCCTTCTTCTTAGATCTCCATCCTCTGTCTTTTCTCACGGATTTTCCGAAAGCCCCTTGAAATCTCTCAGATTCTTATCTACCTCTTCTGAGATTGTATCATCTCCGAAATCTGCTTCGTTGGCCTCTAATGCTGTTCAGCTCGAGAATAATCGGAAGGCTGTAATTGAGTTACTTGCGAACCATGGATTCTCTCAATCACAAATCTCTGACATTGGCAGGAGGCGGCCTCAAATTCTTGCTGCGAACCCCGAGAAAATTCTATTGCCAAAATTGTTGTTTTTTCAATCTAAAGGTCTTTCTTCCCCAGAGATTGCCAAATTAGTATGTACATTTCCTTATGTCTTAACAGGAAGTTTAAACAAACGAATTATTTATAATTTTGATTACATTCAAGCCGTGCTTGGAAGTGAGGAGAAGACTCTCGCTGCCATAAAACAGTTTGCGGGTATTCTCGCTCGGGATCTTCAAATTTCAGTTGGTCCCAATATTGAAATTCTGAAACAAATTGGAGTGCCGGATTCAAATATTTTAAAATATCTTCAGTACCAGCCTAGAGTGTTCATAATAAGTTCCATCCGATTCAAGGAGATTGTAGAGAGAGTTACGGAAATGGGATTCAACCCTCAACGATTGCAGTTTCTTGTTGCTGTTTTTGCTCTGCGAGCAATGACCAAATCTACATGGGATAAGAAGGTTGAAGTTTATAGGAAATGGGGATTGTCTGAAGAAGAGATCTGTTTGGCTTTTAAAAGGCATCCATGGTGTATGATGGTTTCTGAGGATAAGATTAATGGTGCAATGGATTTTTTAAGACCAGCTTTAATTTCACTTAGTTTGAAGAAGAGGCTTAATCCTAGAGGCTACGTTTATCAAGTTTTGCTGGAAAAGGGTTTGATTAAGAAGCAAGCGAACATTCCTTTGTTCGTAAGTTCTTCTGAAAAGCGTTTCATAGAAAAATTCATCAACCCTCATAAGGAGGAGCAGATTCCTGGATTGTTGGAGTTGTACAAACAGAAATTAATGGATTCTAGAAGATGAGCGGGTTCGATCTCCTTGAAACTTAACTGTTTTGTTAGTTGATATGTGTAGAGACAAACTAAATTTTCTATATGCGCAAGAGTTTGTGTTTCTACATTATCACTATTTAGATAGCTAATTGAATGATGACTCCTTAAGAACCGCTTTGCGCCAGGTATTTGGGTACTGTTCCTCTGCTTAACATTGTTGGAGTTATATTATCTGGGCATGGCTGTTTCTAGTTGGGTTGTCTTGAAGGGTTGTCGTGCAG

Coding sequence (CDS)

ATGTCTTACTTGTTTCGCAGAATCCTTCTTCTTAGATCTCCATCCTCTGTCTTTTCTCACGGATTTTCCGAAAGCCCCTTGAAATCTCTCAGATTCTTATCTACCTCTTCTGAGATTGTATCATCTCCGAAATCTGCTTCGTTGGCCTCTAATGCTGTTCAGCTCGAGAATAATCGGAAGGCTGTAATTGAGTTACTTGCGAACCATGGATTCTCTCAATCACAAATCTCTGACATTGGCAGGAGGCGGCCTCAAATTCTTGCTGCGAACCCCGAGAAAATTCTATTGCCAAAATTGTTGTTTTTTCAATCTAAAGGTCTTTCTTCCCCAGAGATTGCCAAATTAGTATGTACATTTCCTTATGTCTTAACAGGAAGTTTAAACAAACGAATTATTTATAATTTTGATTACATTCAAGCCGTGCTTGGAAGTGAGGAGAAGACTCTCGCTGCCATAAAACAGTTTGCGGGTATTCTCGCTCGGGATCTTCAAATTTCAGTTGGTCCCAATATTGAAATTCTGAAACAAATTGGAGTGCCGGATTCAAATATTTTAAAATATCTTCAGTACCAGCCTAGAGTGTTCATAATAAGTTCCATCCGATTCAAGGAGATTGTAGAGAGAGTTACGGAAATGGGATTCAACCCTCAACGATTGCAGTTTCTTGTTGCTGTTTTTGCTCTGCGAGCAATGACCAAATCTACATGGGATAAGAAGGTTGAAGTTTATAGGAAATGGGGATTGTCTGAAGAAGAGATCTGTTTGGCTTTTAAAAGGCATCCATGGTGTATGATGGTTTCTGAGGATAAGATTAATGGTGCAATGGATTTTTTAAGACCAGCTTTAATTTCACTTAGTTTGAAGAAGAGGCTTAATCCTAGAGGCTACGTTTATCAAGTTTTGCTGGAAAAGGGTTTGATTAAGAAGCAAGCGAACATTCCTTTGTTCGTAAGTTCTTCTGAAAAGCGTTTCATAGAAAAATTCATCAACCCTCATAAGGAGGAGCAGATTCCTGGATTGTTGGAGTTGTACAAACAGAAATTAATGGATTCTAGAAGATGA

Protein sequence

MSYLFRRILLLRSPSSVFSHGFSESPLKSLRFLSTSSEIVSSPKSASLASNAVQLENNRKAVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLLFFQSKGLSSPEIAKLVCTFPYVLTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQFAGILARDLQISVGPNIEILKQIGVPDSNILKYLQYQPRVFIISSIRFKEIVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKVEVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFLRPALISLSLKKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSEKRFIEKFINPHKEEQIPGLLELYKQKLMDSRR

Homology

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BLAST of IVF0016524 vs. ExPASy Swiss-Prot
Match: F4JVI3 (Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF5 PE=1 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 1.0e-07
Identity = 56/274 (20.44%), Postives = 123/274 (44.89%), Query Frame = 0


Query: 55  LENNRKAVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLLFFQSKGLSSPEIAK 114
           L+   K V+E L + G  +S I  I  +RPQI   +    L P + F ++ G+   + AK
Sbjct: 228 LDGKIKPVVEFLLDLGIPKSDIPTILCKRPQICGISLTDNLKPTMAFLETLGIDKNQWAK 287

Query: 115 LVCTFPYVLTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQFAGILARDLQISVGPNIEIL 174
           ++  FP +LT S  +++    +++     +EE+    + +   I++  ++  + P +E  
Sbjct: 288 IISRFPAILTYS-RQKLTSTVEFLSQTGLTEEQIGRILTRCPNIMSYSVEDKLRPTMEYF 347

Query: 175 KQIGVPDSNILKYLQYQPRVFIIS-SIRFKEIVERVTEMGFNPQRLQFLVA------VFA 234
           + + V   ++   L   P+ F +S     K + E   E GF    +  +++       F+
Sbjct: 348 RSLNV---DVAVLLHRCPQTFGLSIESNLKPVTEFFLEKGFGLDEIGIMISRYGALYTFS 407

Query: 235 LRAMTKSTWDKKVEVYRKWGLSEEEICLAFKRHPWCMMVS-EDKINGAMDFLRPALISLS 294
           L+      WD     ++     + E+     + P     S +++I    + ++ + + L 
Sbjct: 408 LKENVMPKWD----YFQTMDYPKSELV----KFPQFFGYSLQERIKPRYELVQRSGVRLL 467

Query: 295 LKKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSS 321
           L + L+  G  ++ +++K ++K  +N  +   SS
Sbjct: 468 LNQVLSLSGIEFEKVVKKKMMKLVSNNVIAEQSS 489

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BLAST of IVF0016524 vs. ExPASy TrEMBL
Match: A0A5A7U124 (Transcription termination factor MTEF1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G00780 PE=3 SV=1)

HSP 1 Score: 671.0 bits (1730), Expect = 2.7e-189
Identity = 352/366 (96.17%), Postives = 352/366 (96.17%), Query Frame = 0


Query: 1   MSYLFRRILLLRSPSSVFSHGFSESPLKSLRFLSTSSEIVSSPKSASLASNAVQLENNRK 60
           MSYLFRRILLLRSPSSVFSHGFSESPLKSLRFLSTSSEIVSSPKSASLASNAVQLENNRK
Sbjct: 1   MSYLFRRILLLRSPSSVFSHGFSESPLKSLRFLSTSSEIVSSPKSASLASNAVQLENNRK 60

Query: 61  AVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLLFFQSKGLSSPEIAKLVCTFP 120
           AVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLLFFQSKGLSSPEIAKLVCTFP
Sbjct: 61  AVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLLFFQSKGLSSPEIAKLVCTFP 120

Query: 121 YVLTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQFAGILARDLQISVGPNIEILKQIGVP 180
           YVLTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQFAGILARDLQISVGPNIEILKQIGVP
Sbjct: 121 YVLTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQFAGILARDLQISVGPNIEILKQIGVP 180

Query: 181 DSNILKYLQYQPRVFIISSIRFKEIVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKV 240
           DSNILKYLQYQPRVFIISSIRFKEIVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKV
Sbjct: 181 DSNILKYLQYQPRVFIISSIRFKEIVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKV 240

Query: 241 EVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFL-------------RPALISLSL 300
           EVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDF              RPALISLSL
Sbjct: 241 EVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFFVNKIGCESSFVARRPALISLSL 300

Query: 301 KKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSEKRFIEKFINPHKEEQIPGLLELYKQK 354
           KKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSEKRFIEKFINPHKEEQIPGLLELYKQK
Sbjct: 301 KKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSEKRFIEKFINPHKEEQIPGLLELYKQK 360

[Close]

BLAST of IVF0016524 vs. ExPASy TrEMBL
Match: A0A1S3AYM0 (uncharacterized protein LOC103484197 OS=Cucumis melo OX=3656 GN=LOC103484197 PE=3 SV=1)

HSP 1 Score: 671.0 bits (1730), Expect = 2.7e-189
Identity = 352/366 (96.17%), Postives = 352/366 (96.17%), Query Frame = 0


Query: 1   MSYLFRRILLLRSPSSVFSHGFSESPLKSLRFLSTSSEIVSSPKSASLASNAVQLENNRK 60
           MSYLFRRILLLRSPSSVFSHGFSESPLKSLRFLSTSSEIVSSPKSASLASNAVQLENNRK
Sbjct: 1   MSYLFRRILLLRSPSSVFSHGFSESPLKSLRFLSTSSEIVSSPKSASLASNAVQLENNRK 60

Query: 61  AVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLLFFQSKGLSSPEIAKLVCTFP 120
           AVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLLFFQSKGLSSPEIAKLVCTFP
Sbjct: 61  AVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLLFFQSKGLSSPEIAKLVCTFP 120

Query: 121 YVLTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQFAGILARDLQISVGPNIEILKQIGVP 180
           YVLTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQFAGILARDLQISVGPNIEILKQIGVP
Sbjct: 121 YVLTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQFAGILARDLQISVGPNIEILKQIGVP 180

Query: 181 DSNILKYLQYQPRVFIISSIRFKEIVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKV 240
           DSNILKYLQYQPRVFIISSIRFKEIVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKV
Sbjct: 181 DSNILKYLQYQPRVFIISSIRFKEIVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKV 240

Query: 241 EVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFL-------------RPALISLSL 300
           EVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDF              RPALISLSL
Sbjct: 241 EVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFFVNKIGCESSFVARRPALISLSL 300

Query: 301 KKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSEKRFIEKFINPHKEEQIPGLLELYKQK 354
           KKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSEKRFIEKFINPHKEEQIPGLLELYKQK
Sbjct: 301 KKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSEKRFIEKFINPHKEEQIPGLLELYKQK 360

[Close]

BLAST of IVF0016524 vs. ExPASy TrEMBL
Match: A0A5A7U7J7 (Transcription termination factor MTEF1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G00730 PE=3 SV=1)

HSP 1 Score: 578.2 bits (1489), Expect = 2.4e-161
Identity = 307/366 (83.88%), Postives = 324/366 (88.52%), Query Frame = 0


Query: 1   MSYLFRRILLLRSPSSVFSHGFSESPLKSLRFLSTSSEIVSSPKSASLASNAVQLENNRK 60
           MS +FRRILLLRSPS VF  GFS+SPLKSLR+LSTSSEIVSSP+SA LASNAVQL+N RK
Sbjct: 1   MSNVFRRILLLRSPSPVFPQGFSQSPLKSLRYLSTSSEIVSSPESAPLASNAVQLKNKRK 60

Query: 61  AVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLLFFQSKGLSSPEIAKLVCTFP 120
           AVI LLA+HGFS+SQIS + +R PQIL+ANPEKILLPKLLFFQSKGLSSPEIAKLVC+FP
Sbjct: 61  AVIALLADHGFSESQISSLDKRYPQILSANPEKILLPKLLFFQSKGLSSPEIAKLVCSFP 120

Query: 121 YVLTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQFAGILARDLQISVGPNIEILKQIGVP 180
            VL GSL+ RII  FDYIQAVLGSEEKTLA IK F  IL  DL+ISVGPNIEILKQIGVP
Sbjct: 121 RVLAGSLDNRIIPAFDYIQAVLGSEEKTLAFIKYFGSILTHDLRISVGPNIEILKQIGVP 180

Query: 181 DSNILKYLQYQPRVFIISSIRFKEIVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKV 240
           DSNILKY QYQPRVF  +SIRFKE VERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKV
Sbjct: 181 DSNILKYFQYQPRVFSRNSIRFKETVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKV 240

Query: 241 EVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFL-------------RPALISLSL 300
           EVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDF              RPALISLSL
Sbjct: 241 EVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFFVNKIGCESSFVARRPALISLSL 300

Query: 301 KKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSEKRFIEKFINPHKEEQIPGLLELYKQK 354
           KKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSE RFI+KFINPHK E+IPGLLE Y+QK
Sbjct: 301 KKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSENRFIDKFINPHK-EKIPGLLESYEQK 360

[Close]

BLAST of IVF0016524 vs. ExPASy TrEMBL
Match: A0A1S4DSR4 (uncharacterized protein LOC103483819 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103483819 PE=3 SV=1)

HSP 1 Score: 556.6 bits (1433), Expect = 7.4e-155
Identity = 291/366 (79.51%), Postives = 316/366 (86.34%), Query Frame = 0


Query: 1   MSYLFRRILLLRSPSSVFSHGFSESPLKSLRFLSTSSEIVSSPKSASLASNAVQLENNRK 60
           MS LFRRILLLRSPSSVFSHGFSE PLKSLRFLSTSSEIVSSPKSASLASN VQ++NNRK
Sbjct: 1   MSNLFRRILLLRSPSSVFSHGFSECPLKSLRFLSTSSEIVSSPKSASLASNVVQIKNNRK 60

Query: 61  AVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLLFFQSKGLSSPEIAKLVCTFP 120
           A      NHGFS+SQISDI ++ PQIL+ANPEKILLPKLLFF+SKGLSSPEIAK+V +FP
Sbjct: 61  AAFSFFENHGFSESQISDIDKKFPQILSANPEKILLPKLLFFRSKGLSSPEIAKIVYSFP 120

Query: 121 YVLTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQFAGILARDLQISVGPNIEILKQIGVP 180
           YVL+GSLN RII  FDYIQAVLGSEEKTL  IK FAGIL +DL+ISVGPNIEILKQIGVP
Sbjct: 121 YVLSGSLNNRIIPAFDYIQAVLGSEEKTLTLIKYFAGILTQDLRISVGPNIEILKQIGVP 180

Query: 181 DSNILKYLQYQPRVFIISSIRFKEIVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKV 240
           DSNI KYLQY+PRVF+ + IRFKE V+RVTEMGFNPQ+LQF+VAVF LR++TKSTWDKKV
Sbjct: 181 DSNIFKYLQYRPRVFLTNPIRFKETVDRVTEMGFNPQQLQFVVAVFILRSLTKSTWDKKV 240

Query: 241 EVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFL-------------RPALISLSL 300
           EVYRKWGLSEEEICLAFKRHPWCMMVSEDKING MDF              RP LISLSL
Sbjct: 241 EVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGVMDFFVNKIGCESSFVASRPVLISLSL 300

Query: 301 KKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSEKRFIEKFINPHKEEQIPGLLELYKQK 354
           KKR+ PRGYVYQVLL KGLIKK A+I +FV  SEK FIEK I+PHK EQIPGLLE Y+QK
Sbjct: 301 KKRIFPRGYVYQVLLAKGLIKKHADITMFVKCSEKHFIEKIIDPHK-EQIPGLLESYEQK 360

[Close]

BLAST of IVF0016524 vs. ExPASy TrEMBL
Match: A0A5A7U5J6 (Transcription termination factor MTEF1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G00700 PE=3 SV=1)

HSP 1 Score: 536.6 bits (1381), Expect = 8.0e-149
Identity = 285/366 (77.87%), Postives = 313/366 (85.52%), Query Frame = 0


Query: 1   MSYLFRRILLLRSPSSVFSHGFSESPLKSLRFLSTSSEIVSSPKSASLASNAVQLENNRK 60
           MS LFR ILLL+SPS VFS GFS SPLKSLRFLSTSSEIVSS +SA LASNA QL+N RK
Sbjct: 1   MSNLFRVILLLKSPSPVFSQGFSGSPLKSLRFLSTSSEIVSSTESAPLASNAAQLKNKRK 60

Query: 61  AVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLLFFQSKGLSSPEIAKLVCTFP 120
           AVI LLA++G S+SQIS + +R PQIL+ANPEKILLPKLLFF+SKGLSSPEIAK+V +FP
Sbjct: 61  AVIALLADYGLSESQISVLDKRFPQILSANPEKILLPKLLFFRSKGLSSPEIAKIVYSFP 120

Query: 121 YVLTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQFAGILARDLQISVGPNIEILKQIGVP 180
           YVL+GSLN RII  FDYIQAVLGSEEKTL  IK FAGIL +DL+ISVGPNIEILKQIGVP
Sbjct: 121 YVLSGSLNNRIIPAFDYIQAVLGSEEKTLTLIKYFAGILTQDLRISVGPNIEILKQIGVP 180

Query: 181 DSNILKYLQYQPRVFIISSIRFKEIVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKV 240
           DSNI KYLQY+PRVF+ + IRFKE V+RVTEMGFNPQ+LQF+VAVF LR++TKSTWDKKV
Sbjct: 181 DSNIFKYLQYRPRVFLTNPIRFKETVDRVTEMGFNPQQLQFVVAVFILRSLTKSTWDKKV 240

Query: 241 EVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFL-------------RPALISLSL 300
           EVYRKWGLSEEEICLAFKRHPWCMMVSEDKING MDF              RP LISLSL
Sbjct: 241 EVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGVMDFFVNKIGCESSFVASRPVLISLSL 300

Query: 301 KKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSEKRFIEKFINPHKEEQIPGLLELYKQK 354
           KKR+ PRGYVYQVLL KGLIKK A+I +FV  SEK FIEK I+PHK EQIPGLLE Y+QK
Sbjct: 301 KKRIFPRGYVYQVLLAKGLIKKHADITMFVKCSEKHFIEKIIDPHK-EQIPGLLESYEQK 360

[Close]

BLAST of IVF0016524 vs. NCBI nr
Match: XP_008439382.1 (PREDICTED: uncharacterized protein LOC103484197 [Cucumis melo] >KAA0049472.1 transcription termination factor MTEF1 [Cucumis melo var. makuwa] >TYK16151.1 transcription termination factor MTEF1 [Cucumis melo var. makuwa])

HSP 1 Score: 669 bits (1726), Expect = 1.12e-241
Identity = 352/366 (96.17%), Postives = 352/366 (96.17%), Query Frame = 0


Query: 1   MSYLFRRILLLRSPSSVFSHGFSESPLKSLRFLSTSSEIVSSPKSASLASNAVQLENNRK 60
           MSYLFRRILLLRSPSSVFSHGFSESPLKSLRFLSTSSEIVSSPKSASLASNAVQLENNRK
Sbjct: 1   MSYLFRRILLLRSPSSVFSHGFSESPLKSLRFLSTSSEIVSSPKSASLASNAVQLENNRK 60

Query: 61  AVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLLFFQSKGLSSPEIAKLVCTFP 120
           AVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLLFFQSKGLSSPEIAKLVCTFP
Sbjct: 61  AVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLLFFQSKGLSSPEIAKLVCTFP 120

Query: 121 YVLTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQFAGILARDLQISVGPNIEILKQIGVP 180
           YVLTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQFAGILARDLQISVGPNIEILKQIGVP
Sbjct: 121 YVLTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQFAGILARDLQISVGPNIEILKQIGVP 180

Query: 181 DSNILKYLQYQPRVFIISSIRFKEIVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKV 240
           DSNILKYLQYQPRVFIISSIRFKEIVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKV
Sbjct: 181 DSNILKYLQYQPRVFIISSIRFKEIVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKV 240

Query: 241 EVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFL-------------RPALISLSL 300
           EVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDF              RPALISLSL
Sbjct: 241 EVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFFVNKIGCESSFVARRPALISLSL 300

Query: 301 KKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSEKRFIEKFINPHKEEQIPGLLELYKQK 353
           KKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSEKRFIEKFINPHKEEQIPGLLELYKQK
Sbjct: 301 KKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSEKRFIEKFINPHKEEQIPGLLELYKQK 360

[Close]

BLAST of IVF0016524 vs. NCBI nr
Match: KAA0049469.1 (transcription termination factor MTEF1 [Cucumis melo var. makuwa] >TYK16148.1 transcription termination factor MTEF1 [Cucumis melo var. makuwa])

HSP 1 Score: 576 bits (1484), Expect = 7.95e-205
Identity = 307/366 (83.88%), Postives = 324/366 (88.52%), Query Frame = 0


Query: 1   MSYLFRRILLLRSPSSVFSHGFSESPLKSLRFLSTSSEIVSSPKSASLASNAVQLENNRK 60
           MS +FRRILLLRSPS VF  GFS+SPLKSLR+LSTSSEIVSSP+SA LASNAVQL+N RK
Sbjct: 1   MSNVFRRILLLRSPSPVFPQGFSQSPLKSLRYLSTSSEIVSSPESAPLASNAVQLKNKRK 60

Query: 61  AVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLLFFQSKGLSSPEIAKLVCTFP 120
           AVI LLA+HGFS+SQIS + +R PQIL+ANPEKILLPKLLFFQSKGLSSPEIAKLVC+FP
Sbjct: 61  AVIALLADHGFSESQISSLDKRYPQILSANPEKILLPKLLFFQSKGLSSPEIAKLVCSFP 120

Query: 121 YVLTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQFAGILARDLQISVGPNIEILKQIGVP 180
            VL GSL+ RII  FDYIQAVLGSEEKTLA IK F  IL  DL+ISVGPNIEILKQIGVP
Sbjct: 121 RVLAGSLDNRIIPAFDYIQAVLGSEEKTLAFIKYFGSILTHDLRISVGPNIEILKQIGVP 180

Query: 181 DSNILKYLQYQPRVFIISSIRFKEIVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKV 240
           DSNILKY QYQPRVF  +SIRFKE VERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKV
Sbjct: 181 DSNILKYFQYQPRVFSRNSIRFKETVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKV 240

Query: 241 EVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFL-------------RPALISLSL 300
           EVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDF              RPALISLSL
Sbjct: 241 EVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFFVNKIGCESSFVARRPALISLSL 300

Query: 301 KKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSEKRFIEKFINPHKEEQIPGLLELYKQK 353
           KKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSE RFI+KFINPHKE+ IPGLLE Y+QK
Sbjct: 301 KKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSENRFIDKFINPHKEK-IPGLLESYEQK 360

[Close]

BLAST of IVF0016524 vs. NCBI nr
Match: XP_016899003.1 (PREDICTED: uncharacterized protein LOC103483819 isoform X3 [Cucumis melo] >XP_016899004.1 PREDICTED: uncharacterized protein LOC103483819 isoform X3 [Cucumis melo] >XP_016899005.1 PREDICTED: uncharacterized protein LOC103483819 isoform X3 [Cucumis melo])

HSP 1 Score: 554 bits (1428), Expect = 2.67e-196
Identity = 291/366 (79.51%), Postives = 316/366 (86.34%), Query Frame = 0


Query: 1   MSYLFRRILLLRSPSSVFSHGFSESPLKSLRFLSTSSEIVSSPKSASLASNAVQLENNRK 60
           MS LFRRILLLRSPSSVFSHGFSE PLKSLRFLSTSSEIVSSPKSASLASN VQ++NNRK
Sbjct: 1   MSNLFRRILLLRSPSSVFSHGFSECPLKSLRFLSTSSEIVSSPKSASLASNVVQIKNNRK 60

Query: 61  AVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLLFFQSKGLSSPEIAKLVCTFP 120
           A      NHGFS+SQISDI ++ PQIL+ANPEKILLPKLLFF+SKGLSSPEIAK+V +FP
Sbjct: 61  AAFSFFENHGFSESQISDIDKKFPQILSANPEKILLPKLLFFRSKGLSSPEIAKIVYSFP 120

Query: 121 YVLTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQFAGILARDLQISVGPNIEILKQIGVP 180
           YVL+GSLN RII  FDYIQAVLGSEEKTL  IK FAGIL +DL+ISVGPNIEILKQIGVP
Sbjct: 121 YVLSGSLNNRIIPAFDYIQAVLGSEEKTLTLIKYFAGILTQDLRISVGPNIEILKQIGVP 180

Query: 181 DSNILKYLQYQPRVFIISSIRFKEIVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKV 240
           DSNI KYLQY+PRVF+ + IRFKE V+RVTEMGFNPQ+LQF+VAVF LR++TKSTWDKKV
Sbjct: 181 DSNIFKYLQYRPRVFLTNPIRFKETVDRVTEMGFNPQQLQFVVAVFILRSLTKSTWDKKV 240

Query: 241 EVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFL-------------RPALISLSL 300
           EVYRKWGLSEEEICLAFKRHPWCMMVSEDKING MDF              RP LISLSL
Sbjct: 241 EVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGVMDFFVNKIGCESSFVASRPVLISLSL 300

Query: 301 KKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSEKRFIEKFINPHKEEQIPGLLELYKQK 353
           KKR+ PRGYVYQVLL KGLIKK A+I +FV  SEK FIEK I+PHKE QIPGLLE Y+QK
Sbjct: 301 KKRIFPRGYVYQVLLAKGLIKKHADITMFVKCSEKHFIEKIIDPHKE-QIPGLLESYEQK 360

[Close]

BLAST of IVF0016524 vs. NCBI nr
Match: XP_016899006.1 (PREDICTED: uncharacterized protein LOC107990398 [Cucumis melo])

HSP 1 Score: 534 bits (1376), Expect = 2.12e-188
Identity = 290/363 (79.89%), Postives = 309/363 (85.12%), Query Frame = 0


Query: 1   MSYLFRRILLLRSPSSVFSHGFSESPLKSLRFLSTSSEIVSSPKSASLASNAVQLENNRK 60
           MS LFRRILLLRSPS VF  GFS+SPLKSLR+LSTSSEIVSSP+SA LASNAVQL+ NRK
Sbjct: 1   MSNLFRRILLLRSPSPVFPQGFSQSPLKSLRYLSTSSEIVSSPESAPLASNAVQLKTNRK 60

Query: 61  AVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLLFFQSKGLSSPEIAKLVCTFP 120
           AVI  LA++GFS+SQIS   +R PQIL+ANPEKILLPKLLFFQSKGLSSPEI KLVC+ P
Sbjct: 61  AVIAFLADYGFSESQISSFHKRFPQILSANPEKILLPKLLFFQSKGLSSPEIVKLVCSNP 120

Query: 121 YVLTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQFAGILARDLQISVGPNIEILKQIGVP 180
           + L  SLNKRII  FDYIQAVLGSE K LA IK FA IL RDL ISVGPNIEILKQIGVP
Sbjct: 121 WCLAASLNKRIIPAFDYIQAVLGSE-KALATIKHFASILVRDLGISVGPNIEILKQIGVP 180

Query: 181 DSNILKYLQYQPRVFIISSIRFKEIVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKV 240
           DSNILKYLQYQPRVF+I+SIRFKEIVERVTEMGFNPQ+LQF+VAVFALRAMTKSTWDKKV
Sbjct: 181 DSNILKYLQYQPRVFLINSIRFKEIVERVTEMGFNPQQLQFVVAVFALRAMTKSTWDKKV 240

Query: 241 EVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFL-------------RPALISLSL 300
           EVYRKWGLSEEEI L FKRHPWCM+VSEDKINGAMDF              RPALISLSL
Sbjct: 241 EVYRKWGLSEEEIRLVFKRHPWCMVVSEDKINGAMDFFVNKIGCESSFVARRPALISLSL 300

Query: 301 KKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSEKRFIEKFINPHKEEQIPGLLELYKQK 350
           KKRLNPRGYVYQVLL KGLIKK  N+  F    EKRFIEK INPHKE QIP LLELY++K
Sbjct: 301 KKRLNPRGYVYQVLLAKGLIKKHQNLVSFFEFPEKRFIEKIINPHKE-QIPVLLELYEKK 360

[Close]

BLAST of IVF0016524 vs. NCBI nr
Match: KAA0049466.1 (transcription termination factor MTEF1 [Cucumis melo var. makuwa] >TYK16145.1 transcription termination factor MTEF1 [Cucumis melo var. makuwa])

HSP 1 Score: 534 bits (1376), Expect = 2.19e-188
Identity = 285/366 (77.87%), Postives = 313/366 (85.52%), Query Frame = 0


Query: 1   MSYLFRRILLLRSPSSVFSHGFSESPLKSLRFLSTSSEIVSSPKSASLASNAVQLENNRK 60
           MS LFR ILLL+SPS VFS GFS SPLKSLRFLSTSSEIVSS +SA LASNA QL+N RK
Sbjct: 1   MSNLFRVILLLKSPSPVFSQGFSGSPLKSLRFLSTSSEIVSSTESAPLASNAAQLKNKRK 60

Query: 61  AVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLLFFQSKGLSSPEIAKLVCTFP 120
           AVI LLA++G S+SQIS + +R PQIL+ANPEKILLPKLLFF+SKGLSSPEIAK+V +FP
Sbjct: 61  AVIALLADYGLSESQISVLDKRFPQILSANPEKILLPKLLFFRSKGLSSPEIAKIVYSFP 120

Query: 121 YVLTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQFAGILARDLQISVGPNIEILKQIGVP 180
           YVL+GSLN RII  FDYIQAVLGSEEKTL  IK FAGIL +DL+ISVGPNIEILKQIGVP
Sbjct: 121 YVLSGSLNNRIIPAFDYIQAVLGSEEKTLTLIKYFAGILTQDLRISVGPNIEILKQIGVP 180

Query: 181 DSNILKYLQYQPRVFIISSIRFKEIVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKV 240
           DSNI KYLQY+PRVF+ + IRFKE V+RVTEMGFNPQ+LQF+VAVF LR++TKSTWDKKV
Sbjct: 181 DSNIFKYLQYRPRVFLTNPIRFKETVDRVTEMGFNPQQLQFVVAVFILRSLTKSTWDKKV 240

Query: 241 EVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFL-------------RPALISLSL 300
           EVYRKWGLSEEEICLAFKRHPWCMMVSEDKING MDF              RP LISLSL
Sbjct: 241 EVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGVMDFFVNKIGCESSFVASRPVLISLSL 300

Query: 301 KKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSEKRFIEKFINPHKEEQIPGLLELYKQK 353
           KKR+ PRGYVYQVLL KGLIKK A+I +FV  SEK FIEK I+PHKE QIPGLLE Y+QK
Sbjct: 301 KKRIFPRGYVYQVLLAKGLIKKHADITMFVKCSEKHFIEKIIDPHKE-QIPGLLESYEQK 360

[Close]

BLAST of IVF0016524 vs. TAIR 10
Match: AT5G07900.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 215.3 bits (547), Expect = 7.8e-56
Identity = 120/319 (37.62%), Postives = 196/319 (61.44%), Query Frame = 0


Query: 42  SPKSASLASNAVQLENNRK--AVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKL 101
           SP SA++AS  + L++  +   V+ LL +HGF+ +QIS + ++RP +L AN E +LLPKL
Sbjct: 82  SPDSATVASRKLLLDSPERPNTVLNLLRDHGFTTAQISSLVKKRPVLLLANAESVLLPKL 141

Query: 102 LFFQSKGLSSPEIAKLVCTFPYVLTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQFAGIL 161
            FF S G+S   +A+ + + P +LT SL  ++I +++++++VL S+EK +AA+++   + 
Sbjct: 142 SFFLSIGVSKSLLARTLASDPTILTRSLVNQLIPSYNFLKSVLDSDEKIVAALRRTTWVF 201

Query: 162 ARDLQISVGPNIEILKQIGVPDSNILKYLQYQPRVFIISSIRFKEIVERVTEMGFNPQRL 221
             D   ++ PNI  + + GVP+  I   L + P   +  +  F+ I ++  EMGFNPQ+ 
Sbjct: 202 LEDHTKNLVPNINYMAETGVPEKCIKLLLTHFPEAVMQKNHEFQAIAKQAQEMGFNPQKS 261

Query: 222 QFLVAVFALRAM-TKSTWDKKVEVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFL 281
            F++A+ AL     KS WDK  EVY++WG SE++I  AFK+HP CMM+SE KIN  M++ 
Sbjct: 262 TFVLAIHALSGKGNKSIWDKCFEVYQRWGWSEDDIMCAFKKHPHCMMLSERKINRTMEYF 321

Query: 282 -------------RPALISLSLKKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSEKRFI 341
                         P ++  SL+KR+ PR  V +VL+  GL+K+  ++   +   EK F+
Sbjct: 322 VNEMNMAPRSIAQCPVVLFFSLEKRIIPRCSVTKVLVSNGLVKEDWSLTSLLVPVEKVFL 381

Query: 342 EKFINPHKEEQIPGLLELY 345
           EK +  + EE++P L+ LY
Sbjct: 382 EKLVIKY-EEELPELMNLY 399

[Close]

BLAST of IVF0016524 vs. TAIR 10
Match: AT1G21150.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 175.3 bits (443), Expect = 9.0e-44
Identity = 113/362 (31.22%), Postives = 203/362 (56.08%), Query Frame = 0


Query: 1   MSYLFRRILLLRSPSSVFSHGFSESP--LKSLRFLSTSSEIVSSPKSASLASNAVQLENN 60
           + +L  RI  L S S V S    +    L+S            S +SA   S  V+L ++
Sbjct: 26  LGFLVGRIRTLCSVSQVKSENLEKQKPCLESFTVSYLVDSCGLSLESAKSNSRFVKLVSS 85

Query: 61  RK--AVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLLFFQSKGLSSPEIAKLV 120
           +K  +V+ L  +HGF+  QI+ + +  P++L+ +PE ++ PKL+FF S G S+ + AK++
Sbjct: 86  KKPDSVLALFKDHGFTNDQITSVIKSFPRVLSLSPEDVISPKLMFFSSIGFSTSDTAKMI 145

Query: 121 CTFPYVLTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQFAGILARDLQIS--VGPNIEIL 180
            + P +L+ SL+KR+I  +D ++++L  EE  +  +K+  GI    L+I+  V   + I 
Sbjct: 146 SSSPKMLSYSLHKRLIPCYDSLKSILVEEESVVKCLKR--GIRCFSLKITHCVSLRVSIC 205

Query: 181 KQIGVPDSNILKYLQYQPRVFIISSIRFKEIVERVTEMGFNPQRLQFLVAVFALRAMTKS 240
           +++GVPD +I   +Q  P  F     RF E++ RV   GF+P++  F+ A+ A    ++S
Sbjct: 206 RELGVPDKSIKWLVQASPFTFFSRERRFNEVLNRVCSYGFDPKKAGFVHAMVAFDCTSES 265

Query: 241 TWDKKVEVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFL-------------RPA 300
             ++K ++++ +G S+E+   A  R P C+ VS++KI   +++L             RP 
Sbjct: 266 AMERKFKLFQCFGWSKEDFVAAIMRFPNCVTVSDEKIMYTLEYLVNNIGLQARDIVARPV 325

Query: 301 LISLSLKKRLNPRGYVYQVLLEKGLIKKQ-ANIPLFVSSSEKRFIEKFINPHKEEQIPGL 343
           ++SLS++KR+ PR  V  +LL KGL+KK+  N    +      F++KF+  +++E +P L
Sbjct: 326 VLSLSMEKRIKPRNQVISLLLSKGLVKKEDINYFTILKLKSSEFMDKFVLKYQDE-MPQL 384

[Close]

BLAST of IVF0016524 vs. TAIR 10
Match: AT5G64950.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 151.8 bits (382), Expect = 1.1e-36
Identity = 100/314 (31.85%), Postives = 168/314 (53.50%), Query Frame = 0


Query: 51  NAVQLENNRKAVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLLFFQSKGLSSP 110
           N   LE  R +VI++L ++ FS +QI    R  P+++  N EKIL PKL FF+  G +  
Sbjct: 64  NLKSLEQPR-SVIQMLKSYSFSDTQIQKSIRVHPRMMFYNVEKILEPKLRFFKDIGFTGS 123

Query: 111 EIAKLVCTFPYVLTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQFAG--ILARDLQISVG 170
            + K V     V+  SL K++I   + +++++  + + L  I    G  +L+RD  + + 
Sbjct: 124 GLGKFVSQNSSVVGVSLVKKLIPTVEILKSIVAPKHEDLPVILSRCGWLLLSRDPNLFLL 183

Query: 171 PNIEILKQIGVPDSNILKYLQYQPRVFIISSIRFKEIVERVTEMGFNPQRLQFLVAVFAL 230
           PNI  L+  G+  S +   L+ QPR+F +S  + +  V R  ++GF       + AV +L
Sbjct: 184 PNISYLETCGIVGSQLASLLRRQPRIFNLSEEKLRGYVSRALDLGFTLNSRMLVHAVISL 243

Query: 231 RAMTKSTWDKKVEVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFL---------- 290
            ++++ T+D+KV+++   G SE+EI    +R P  +  SEDK+    +F           
Sbjct: 244 SSLSEKTFDRKVKLFMANGFSEDEITDIIRRSPGLIRCSEDKLTLGFEFYLKRMGLEREA 303

Query: 291 ---RPALISLSLKKRLNPRGYVYQVLLEKGLI----KKQANIPLFVSSSEKRFIEKFINP 346
              RP ++S +L+KR+ PR  V Q+L EKGL+    KK+ N+   V  +E+ F+EK++  
Sbjct: 304 LAKRPCVLSYNLEKRVIPRLKVLQILREKGLLLKEEKKKKNMVGIVEMTEEAFLEKYVVR 363

[Close]

BLAST of IVF0016524 vs. TAIR 10
Match: AT1G61970.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 131.3 bits (329), Expect = 1.5e-30
Identity = 103/360 (28.61%), Postives = 174/360 (48.33%), Query Frame = 0


Query: 44  KSASLASNAVQLE--NNRKAVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLLF 103
           K A   S  V  E  NN  +V+ LL +HGF+ SQIS I R  PQ+L A+ EK L PKL F
Sbjct: 67  KLAESISRKVSFEDKNNPDSVLNLLTSHGFTGSQISTIIRDYPQLLIADAEKSLGPKLQF 126

Query: 104 FQSKGLSSPEIAKLVCTFPYVLTGSLNKRIIYNFDYIQAVL----GSEEKTLAAIKQFAG 163
            QS+G SS EI ++V + P +L    +K I   +D+I+  L       EK   ++ Q  G
Sbjct: 127 LQSRGASSSEITEIVSSVPEILGKKGHKTISVYYDFIKDTLLEKSSKNEKLCHSLPQ--G 186

Query: 164 ILARDLQISVGPNIEILKQIGVPDSNILKYL--QYQPRVFIISSIRFKEIVERVTEMGFN 223
            L   ++     N+ +L+++G+P   +   L    QP   +    +F+E +++V EMGF+
Sbjct: 187 NLENKIR-----NVSVLRELGMPHKLLFSLLISDSQP---VCGKEKFEETLKKVVEMGFD 246

Query: 224 PQRLQFLVAVFALRAMTKSTWDKKVEVY--------------RKW--------------- 283
           P   +F+ A+  +  M + T ++KV +Y              +KW               
Sbjct: 247 PTTSKFVEALQVIYKMNEKTIEEKVHLYKSLGFDVGDVWSSFKKWPISLRVSEKKMLDSI 306

Query: 284 ------GLSEEEICLAFKRHPWCMMVSEDKINGAMDFL-------------RPALISLSL 343
                 G S +E     K  P C+ +S + +    +FL              PA+   SL
Sbjct: 307 ETFLGLGFSRDEFAKMVKHFPPCIGLSTETVKKKTEFLVKKMNWPLKAVVSNPAVFGYSL 366

Query: 344 KKRLNPRGYVYQVLLEKGLIKKQ-ANIPLFVSSSEKRFIEKFINPHKEEQ-IPGLLELYK 346
           +KR+ PRG V + L+ KGL++ +  +I   +  +++ F+ +++  H ++Q +  L+ +Y+
Sbjct: 367 EKRIVPRGNVIKALMSKGLMRNELPSISCVLMCTKQVFLNRYVANHVDKQLVTELMAIYR 416

[Close]

BLAST of IVF0016524 vs. TAIR 10
Match: AT1G61970.2 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 131.3 bits (329), Expect = 1.5e-30
Identity = 103/360 (28.61%), Postives = 174/360 (48.33%), Query Frame = 0


Query: 44  KSASLASNAVQLE--NNRKAVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLLF 103
           K A   S  V  E  NN  +V+ LL +HGF+ SQIS I R  PQ+L A+ EK L PKL F
Sbjct: 67  KLAESISRKVSFEDKNNPDSVLNLLTSHGFTGSQISTIIRDYPQLLIADAEKSLGPKLQF 126

Query: 104 FQSKGLSSPEIAKLVCTFPYVLTGSLNKRIIYNFDYIQAVL----GSEEKTLAAIKQFAG 163
            QS+G SS EI ++V + P +L    +K I   +D+I+  L       EK   ++ Q  G
Sbjct: 127 LQSRGASSSEITEIVSSVPEILGKKGHKTISVYYDFIKDTLLEKSSKNEKLCHSLPQ--G 186

Query: 164 ILARDLQISVGPNIEILKQIGVPDSNILKYL--QYQPRVFIISSIRFKEIVERVTEMGFN 223
            L   ++     N+ +L+++G+P   +   L    QP   +    +F+E +++V EMGF+
Sbjct: 187 NLENKIR-----NVSVLRELGMPHKLLFSLLISDSQP---VCGKEKFEETLKKVVEMGFD 246

Query: 224 PQRLQFLVAVFALRAMTKSTWDKKVEVY--------------RKW--------------- 283
           P   +F+ A+  +  M + T ++KV +Y              +KW               
Sbjct: 247 PTTSKFVEALQVIYKMNEKTIEEKVHLYKSLGFDVGDVWSSFKKWPISLRVSEKKMLDSI 306

Query: 284 ------GLSEEEICLAFKRHPWCMMVSEDKINGAMDFL-------------RPALISLSL 343
                 G S +E     K  P C+ +S + +    +FL              PA+   SL
Sbjct: 307 ETFLGLGFSRDEFAKMVKHFPPCIGLSTETVKKKTEFLVKKMNWPLKAVVSNPAVFGYSL 366

Query: 344 KKRLNPRGYVYQVLLEKGLIKKQ-ANIPLFVSSSEKRFIEKFINPHKEEQ-IPGLLELYK 346
           +KR+ PRG V + L+ KGL++ +  +I   +  +++ F+ +++  H ++Q +  L+ +Y+
Sbjct: 367 EKRIVPRGNVIKALMSKGLMRNELPSISCVLMCTKQVFLNRYVANHVDKQLVTELMAIYR 416

The following BLAST results are available for this feature:

BLAST of IVF0016524 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JVI3	1.0e-07	20.44	Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana O...	[more]

BLAST of IVF0016524 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U124	2.7e-189	96.17	Transcription termination factor MTEF1 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S3AYM0	2.7e-189	96.17	uncharacterized protein LOC103484197 OS=Cucumis melo OX=3656 GN=LOC103484197 PE=...	[more]
A0A5A7U7J7	2.4e-161	83.88	Transcription termination factor MTEF1 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S4DSR4	7.4e-155	79.51	uncharacterized protein LOC103483819 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5A7U5J6	8.0e-149	77.87	Transcription termination factor MTEF1 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]

BLAST of IVF0016524 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008439382.1	1.12e-241	96.17	PREDICTED: uncharacterized protein LOC103484197 [Cucumis melo] >KAA0049472.1 tra...	[more]
KAA0049469.1	7.95e-205	83.88	transcription termination factor MTEF1 [Cucumis melo var. makuwa] >TYK16148.1 tr...	[more]
XP_016899003.1	2.67e-196	79.51	PREDICTED: uncharacterized protein LOC103483819 isoform X3 [Cucumis melo] >XP_01...	[more]
XP_016899006.1	2.12e-188	79.89	PREDICTED: uncharacterized protein LOC107990398 [Cucumis melo]	[more]
KAA0049466.1	2.19e-188	77.87	transcription termination factor MTEF1 [Cucumis melo var. makuwa] >TYK16145.1 tr...	[more]

BLAST of IVF0016524 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G07900.1	7.8e-56	37.62	Mitochondrial transcription termination factor family protein	[more]
AT1G21150.1	9.0e-44	31.22	Mitochondrial transcription termination factor family protein	[more]
AT5G64950.1	1.1e-36	31.85	Mitochondrial transcription termination factor family protein	[more]
AT1G61970.1	1.5e-30	28.61	Mitochondrial transcription termination factor family protein	[more]
AT1G61970.2	1.5e-30	28.61	Mitochondrial transcription termination factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 77..108 e-value: 0.04 score: 23.1 coord: 185..215 e-value: 520.0 score: 6.1 coord: 254..284 e-value: 110.0 score: 11.3 coord: 113..145 e-value: 1.6 score: 17.7 coord: 149..180 e-value: 180.0 score: 9.7
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 63..278 e-value: 5.9E-28 score: 97.7
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 39..350
IPR038538	MTERF superfamily, mitochondrial/chloroplastic	GENE3D	1.25.70.10	Transcription termination factor 3, mitochondrial	coord: 144..336 e-value: 3.1E-37 score: 130.2
None	No IPR available	PANTHER	PTHR13068:SF160	TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED	coord: 39..350

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0016524.2	IVF0016524.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006353	DNA-templated transcription, termination
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003690	double-stranded DNA binding