IVF0016509 (gene) Melon (IVF77) v1

Overview


Name	IVF0016509
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Heat shock protein DnaJ
Location	chr10: 3980035 .. 3980867 (-)
RNA-Seq Expression	IVF0016509
Synteny	IVF0016509

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCCAATTCCCTTCTTCTCTTAAAAACCACCAACTCCTCCCTTCGCCTACGTGTTCTTCCTTCTCACCACTTTCTTCTTTTCTTTTCTTTTCTTCAAAATTAATTTTATTAAAAAATCTCCCCAACTAAAATATTTTAAAAAAAGAAAAATCTCTCATCCATTCCCTCTCCCTCTCCACAACCCCTCCCCCATGGTTCCCATCGTCCTCTCCCAACTCGCCACCGGCCTCAGCGTCCTCGCCGGCGCCGTCCTCGTCAAATCCGTCATGGACCACAAGCCCATGGCCGGCTCCTTCCCCCGCTGCCCTTCCTGCAACGGCACTGGCCGCGTCCCCTGTCTCTGCTCCCGCTGGTCCGACGGAGACATCGGCTGCCGCACCTGCTCCGGCTCTGGTCGTATGTTCTGCAGCAGCTGTGGCGGCTCCGGCACCGGCCGCCCTCTTCCCGCTCAAATCTCCCTTCGTCGATCCAATTACCCTTCCTCTTCTTCCTGATTCTCCTTCTCTCTCTCTCTCTCTCTCTCTCACTACTCTAATATTTCCTTATCTTCTTCACCATTAATTATTAGGGCACCACACCAAAAAAAAAAGAAAAAATCAAATCGCCTCTGTAATTTGGGAGTTCTTGAGATTTACACTAAGAGCGAATGAGAGGCATTATCGTTTCCCTCAATTCAGATTCGTATATAGAAATCTATACTTCTCGTAATTAATTATACTAATTTTGTTAATCATATAACTCTTTCTTATTTCTTCTTCTTCTTCTTCTTTTCTCTGAATCTGTGTTTTATAATTCCTTGATTTGATTTGTTGATTATCATTTTTAATTGCAAG

mRNA sequence

CTCCAATTCCCTTCTTCTCTTAAAAACCACCAACTCCTCCCTTCGCCTACGTGTTCTTCCTTCTCACCACTTTCTTCTTTTCTTTTCTTTTCTTCAAAATTAATTTTATTAAAAAATCTCCCCAACTAAAATATTTTAAAAAAAGAAAAATCTCTCATCCATTCCCTCTCCCTCTCCACAACCCCTCCCCCATGGTTCCCATCGTCCTCTCCCAACTCGCCACCGGCCTCAGCGTCCTCGCCGGCGCCGTCCTCGTCAAATCCGTCATGGACCACAAGCCCATGGCCGGCTCCTTCCCCCGCTGCCCTTCCTGCAACGGCACTGGCCGCGTCCCCTGTCTCTGCTCCCGCTGGTCCGACGGAGACATCGGCTGCCGCACCTGCTCCGGCTCTGGTCGTATGTTCTGCAGCAGCTGTGGCGGCTCCGGCACCGGCCGCCCTCTTCCCGCTCAAATCTCCCTTCGTCGATCCAATTACCCTTCCTCTTCTTCCTGATTCTCCTTCTCTCTCTCTCTCTCTCTCTCTCACTACTCTAATATTTCCTTATCTTCTTCACCATTAATTATTAGGGCACCACACCAAAAAAAAAAGAAAAAATCAAATCGCCTCTGTAATTTGGGAGTTCTTGAGATTTACACTAAGAGCGAATGAGAGGCATTATCGTTTCCCTCAATTCAGATTCGTATATAGAAATCTATACTTCTCGTAATTAATTATACTAATTTTGTTAATCATATAACTCTTTCTTATTTCTTCTTCTTCTTCTTCTTTTCTCTGAATCTGTGTTTTATAATTCCTTGATTTGATTTGTTGATTATCATTTTTAATTGCAAG

Coding sequence (CDS)

ATGGTTCCCATCGTCCTCTCCCAACTCGCCACCGGCCTCAGCGTCCTCGCCGGCGCCGTCCTCGTCAAATCCGTCATGGACCACAAGCCCATGGCCGGCTCCTTCCCCCGCTGCCCTTCCTGCAACGGCACTGGCCGCGTCCCCTGTCTCTGCTCCCGCTGGTCCGACGGAGACATCGGCTGCCGCACCTGCTCCGGCTCTGGTCGTATGTTCTGCAGCAGCTGTGGCGGCTCCGGCACCGGCCGCCCTCTTCCCGCTCAAATCTCCCTTCGTCGATCCAATTACCCTTCCTCTTCTTCCTGA

Protein sequence

MVPIVLSQLATGLSVLAGAVLVKSVMDHKPMAGSFPRCPSCNGTGRVPCLCSRWSDGDIGCRTCSGSGRMFCSSCGGSGTGRPLPAQISLRRSNYPSSSS

Homology

[Close]

BLAST of IVF0016509 vs. ExPASy TrEMBL
Match: A0A1S3BEY5 (uncharacterized protein LOC103488885 OS=Cucumis melo OX=3656 GN=LOC103488885 PE=4 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 2.7e-49
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 1   MVPIVLSQLATGLSVLAGAVLVKSVMDHKPMAGSFPRCPSCNGTGRVPCLCSRWSDGDIG 60
           MVPIVLSQLATGLSVLAGAVLVKSVMDHKPMAGSFPRCPSCNGTGRVPCLCSRWSDGDIG
Sbjct: 1   MVPIVLSQLATGLSVLAGAVLVKSVMDHKPMAGSFPRCPSCNGTGRVPCLCSRWSDGDIG 60

Query: 61  CRTCSGSGRMFCSSCGGSGTGRPLPAQISLRRSNYPSSSS 101
           CRTCSGSGRMFCSSCGGSGTGRPLPAQISLRRSNYPSSSS
Sbjct: 61  CRTCSGSGRMFCSSCGGSGTGRPLPAQISLRRSNYPSSSS 100

[Close]

BLAST of IVF0016509 vs. ExPASy TrEMBL
Match: A0A0A0KPV9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G589380 PE=4 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 1.2e-46
Identity = 95/100 (95.00%), Postives = 99/100 (99.00%), Query Frame = 0


Query: 1   MVPIVLSQLATGLSVLAGAVLVKSVMDHKPMAGSFPRCPSCNGTGRVPCLCSRWSDGDIG 60
           MVPIVLSQLATGLSVLAGAVLVKSVMDHKPMAGSFPRCPSCNG+GRVPCLCSRWSDGDIG
Sbjct: 1   MVPIVLSQLATGLSVLAGAVLVKSVMDHKPMAGSFPRCPSCNGSGRVPCLCSRWSDGDIG 60

Query: 61  CRTCSGSGRMFCSSCGGSGTGRPLPAQISLRRSNYPSSSS 101
            RTCSGSGRMFCSSCGGSGTGRP+P+QIS+RRSNYPSSSS
Sbjct: 61  WRTCSGSGRMFCSSCGGSGTGRPIPSQISVRRSNYPSSSS 100

[Close]

BLAST of IVF0016509 vs. ExPASy TrEMBL
Match: A0A6J1DG38 (uncharacterized protein LOC111019780 OS=Momordica charantia OX=3673 GN=LOC111019780 PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.3e-43
Identity = 87/99 (87.88%), Postives = 96/99 (96.97%), Query Frame = 0


Query: 1   MVPIVLSQLATGLSVLAGAVLVKSVMDHKPMAGSFPRCPSCNGTGRVPCLCSRWSDGDIG 60
           MVP+VL+QLATGLSVLAGAVLVKSVMD KPMAG FPRCPSCNGTGRV CLCSRWSDGD+G
Sbjct: 1   MVPMVLTQLATGLSVLAGAVLVKSVMDQKPMAGPFPRCPSCNGTGRVACLCSRWSDGDVG 60

Query: 61  CRTCSGSGRMFCSSCGGSGTGRPLPAQISLRRSNYPSSS 100
           CRTCSGSGRMFCSSCGG+GTGRP+PAQ+S+RR+N+PSSS
Sbjct: 61  CRTCSGSGRMFCSSCGGTGTGRPIPAQLSVRRTNHPSSS 99

[Close]

BLAST of IVF0016509 vs. ExPASy TrEMBL
Match: A0A6J1K8V1 (uncharacterized protein LOC111493328 OS=Cucurbita maxima OX=3661 GN=LOC111493328 PE=4 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 3.7e-43
Identity = 92/100 (92.00%), Postives = 96/100 (96.00%), Query Frame = 0


Query: 1   MVPIVLSQLATGLSVLAGAVLVKSVMDHKPMAGSFPRCPSCNGTGRVPCLCSRWSDGDIG 60
           MVPIVL+QLATGLSVLAGAVLVKSVMD KPMAGS PRCPSCNGTGRVPCLCSRWSD DIG
Sbjct: 1   MVPIVLTQLATGLSVLAGAVLVKSVMD-KPMAGSSPRCPSCNGTGRVPCLCSRWSDRDIG 60

Query: 61  CRTCSGSGRMFCSSCGGSGTGRPLPAQISLRRSNYPSSSS 101
           CRTCSGSGRMFCSSCGGSGTGRP+PAQIS+RR+NYP SSS
Sbjct: 61  CRTCSGSGRMFCSSCGGSGTGRPIPAQISVRRTNYPPSSS 99

[Close]

BLAST of IVF0016509 vs. ExPASy TrEMBL
Match: A0A6J1GZK6 (uncharacterized protein LOC111458584 OS=Cucurbita moschata OX=3662 GN=LOC111458584 PE=4 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 3.7e-43
Identity = 92/100 (92.00%), Postives = 96/100 (96.00%), Query Frame = 0


Query: 1   MVPIVLSQLATGLSVLAGAVLVKSVMDHKPMAGSFPRCPSCNGTGRVPCLCSRWSDGDIG 60
           MVPIVL+QLATGLSVLAGAVLVKSVMD KPMAGS PRCPSCNGTGRVPCLCSRWSD DIG
Sbjct: 1   MVPIVLTQLATGLSVLAGAVLVKSVMD-KPMAGSSPRCPSCNGTGRVPCLCSRWSDRDIG 60

Query: 61  CRTCSGSGRMFCSSCGGSGTGRPLPAQISLRRSNYPSSSS 101
           CRTCSGSGRMFCSSCGGSGTGRP+PAQIS+RR+NYP SSS
Sbjct: 61  CRTCSGSGRMFCSSCGGSGTGRPIPAQISVRRTNYPPSSS 99

[Close]

BLAST of IVF0016509 vs. NCBI nr
Match: XP_008446034.1 (PREDICTED: uncharacterized protein LOC103488885 [Cucumis melo])

HSP 1 Score: 203 bits (516), Expect = 8.64e-66
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 1   MVPIVLSQLATGLSVLAGAVLVKSVMDHKPMAGSFPRCPSCNGTGRVPCLCSRWSDGDIG 60
           MVPIVLSQLATGLSVLAGAVLVKSVMDHKPMAGSFPRCPSCNGTGRVPCLCSRWSDGDIG
Sbjct: 1   MVPIVLSQLATGLSVLAGAVLVKSVMDHKPMAGSFPRCPSCNGTGRVPCLCSRWSDGDIG 60

Query: 61  CRTCSGSGRMFCSSCGGSGTGRPLPAQISLRRSNYPSSSS 100
           CRTCSGSGRMFCSSCGGSGTGRPLPAQISLRRSNYPSSSS
Sbjct: 61  CRTCSGSGRMFCSSCGGSGTGRPLPAQISLRRSNYPSSSS 100

[Close]

BLAST of IVF0016509 vs. NCBI nr
Match: XP_038892730.1 (uncharacterized protein LOC120081711 [Benincasa hispida])

HSP 1 Score: 200 bits (508), Expect = 1.44e-64
Identity = 97/100 (97.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 1   MVPIVLSQLATGLSVLAGAVLVKSVMDHKPMAGSFPRCPSCNGTGRVPCLCSRWSDGDIG 60
           MVPIVL+QLATGLSVLAGAVLVKSVMDHKPMAGSFPRCPSCNGTGRVPCLCSRWSDGDIG
Sbjct: 1   MVPIVLTQLATGLSVLAGAVLVKSVMDHKPMAGSFPRCPSCNGTGRVPCLCSRWSDGDIG 60

Query: 61  CRTCSGSGRMFCSSCGGSGTGRPLPAQISLRRSNYPSSSS 100
           CRTCSGSGRMFCSSCGGSGTGRP+PAQIS+RRSNYPSSSS
Sbjct: 61  CRTCSGSGRMFCSSCGGSGTGRPIPAQISVRRSNYPSSSS 100

[Close]

BLAST of IVF0016509 vs. NCBI nr
Match: XP_011655560.2 (uncharacterized protein LOC105435558 [Cucumis sativus] >KAE8648678.1 hypothetical protein Csa_008156 [Cucumis sativus])

HSP 1 Score: 198 bits (504), Expect = 6.05e-64
Identity = 96/100 (96.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 1   MVPIVLSQLATGLSVLAGAVLVKSVMDHKPMAGSFPRCPSCNGTGRVPCLCSRWSDGDIG 60
           MVPIVLSQLATGLSVLAGAVLVKSVMDHKPMAGSFPRCPSCNG+GRVPCLCSRWSDGDIG
Sbjct: 1   MVPIVLSQLATGLSVLAGAVLVKSVMDHKPMAGSFPRCPSCNGSGRVPCLCSRWSDGDIG 60

Query: 61  CRTCSGSGRMFCSSCGGSGTGRPLPAQISLRRSNYPSSSS 100
           CRTCSGSGRMFCSSCGGSGTGRP+P+QIS+RRSNYPSSSS
Sbjct: 61  CRTCSGSGRMFCSSCGGSGTGRPIPSQISVRRSNYPSSSS 100

[Close]

BLAST of IVF0016509 vs. NCBI nr
Match: XP_023552719.1 (uncharacterized protein LOC111810279 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 185 bits (470), Expect = 8.74e-59
Identity = 92/100 (92.00%), Postives = 97/100 (97.00%), Query Frame = 0


Query: 1   MVPIVLSQLATGLSVLAGAVLVKSVMDHKPMAGSFPRCPSCNGTGRVPCLCSRWSDGDIG 60
           MVP+VL+QLATGLSVLAGAVLVKSVMD KPMAGSFPRCPSCNGTGRVPCLCSRWSD DIG
Sbjct: 1   MVPVVLTQLATGLSVLAGAVLVKSVMD-KPMAGSFPRCPSCNGTGRVPCLCSRWSDRDIG 60

Query: 61  CRTCSGSGRMFCSSCGGSGTGRPLPAQISLRRSNYPSSSS 100
           CRTCSGSGRMFCSSCGGSGTGRP+PAQIS+RR+NYP SSS
Sbjct: 61  CRTCSGSGRMFCSSCGGSGTGRPIPAQISVRRTNYPPSSS 99

[Close]

BLAST of IVF0016509 vs. NCBI nr
Match: XP_022151926.1 (uncharacterized protein LOC111019780 [Momordica charantia])

HSP 1 Score: 184 bits (467), Expect = 2.51e-58
Identity = 87/99 (87.88%), Postives = 96/99 (96.97%), Query Frame = 0


Query: 1  MVPIVLSQLATGLSVLAGAVLVKSVMDHKPMAGSFPRCPSCNGTGRVPCLCSRWSDGDIG 60
          MVP+VL+QLATGLSVLAGAVLVKSVMD KPMAG FPRCPSCNGTGRV CLCSRWSDGD+G
Sbjct: 1  MVPMVLTQLATGLSVLAGAVLVKSVMDQKPMAGPFPRCPSCNGTGRVACLCSRWSDGDVG 60

Query: 61 CRTCSGSGRMFCSSCGGSGTGRPLPAQISLRRSNYPSSS 99
          CRTCSGSGRMFCSSCGG+GTGRP+PAQ+S+RR+N+PSSS
Sbjct: 61 CRTCSGSGRMFCSSCGGTGTGRPIPAQLSVRRTNHPSSS 99

[Close]

BLAST of IVF0016509 vs. TAIR 10
Match: AT5G43260.1 (chaperone protein dnaJ-related )

HSP 1 Score: 160.6 bits (405), Expect = 6.5e-40
Identity = 74/96 (77.08%), Postives = 84/96 (87.50%), Query Frame = 0


Query: 1  MVPIVLSQLATGLSVLAGAVLVKSVMDHKPMAGSFPRCPSCNGTGRVPCLCSRWSDGDIG 60
          M PIV++QLATG+SVLAGAV +KSVMD KPMAG FPRCP+CNGTGRV C CSRWSDGD+G
Sbjct: 1  MSPIVITQLATGISVLAGAVFIKSVMDQKPMAGQFPRCPTCNGTGRVTCFCSRWSDGDVG 60

Query: 61 CRTCSGSGRMFCSSCGGSGTGRPLPAQISLRRSNYP 97
          CR CSGSGR  CS+CGGSGTGRPLPAQI+++  N P
Sbjct: 61 CRRCSGSGRAACSNCGGSGTGRPLPAQITVQPPNRP 96

[Close]

BLAST of IVF0016509 vs. TAIR 10
Match: AT3G44020.1 (thylakoid lumenal P17.1 protein )

HSP 1 Score: 41.2 bits (95), Expect = 5.7e-04
Identity = 21/52 (40.38%), Postives = 26/52 (50.00%), Query Frame = 0


Query: 38  CPSCNGTGRVPCL-C----SRWSDGDIGCRTCSGSGRMFCSSCGGSGTGRPL 85
           C  C G G   C+ C     +   G + C+ C GSG +FC  CGGSG  R L
Sbjct: 108 CERCGGNGGTKCVFCLEGKMKVESGMVDCKVCKGSGLIFCKKCGGSGYSRRL 159

The following BLAST results are available for this feature:

BLAST of IVF0016509 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0016509 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BEY5	2.7e-49	100.00	uncharacterized protein LOC103488885 OS=Cucumis melo OX=3656 GN=LOC103488885 PE=...	[more]
A0A0A0KPV9	1.2e-46	95.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G589380 PE=4 SV=1	[more]
A0A6J1DG38	1.3e-43	87.88	uncharacterized protein LOC111019780 OS=Momordica charantia OX=3673 GN=LOC111019...	[more]
A0A6J1K8V1	3.7e-43	92.00	uncharacterized protein LOC111493328 OS=Cucurbita maxima OX=3661 GN=LOC111493328...	[more]
A0A6J1GZK6	3.7e-43	92.00	uncharacterized protein LOC111458584 OS=Cucurbita moschata OX=3662 GN=LOC1114585...	[more]

BLAST of IVF0016509 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008446034.1	8.64e-66	100.00	PREDICTED: uncharacterized protein LOC103488885 [Cucumis melo]	[more]
XP_038892730.1	1.44e-64	97.00	uncharacterized protein LOC120081711 [Benincasa hispida]	[more]
XP_011655560.2	6.05e-64	96.00	uncharacterized protein LOC105435558 [Cucumis sativus] >KAE8648678.1 hypothetica...	[more]
XP_023552719.1	8.74e-59	92.00	uncharacterized protein LOC111810279 [Cucurbita pepo subsp. pepo]	[more]
XP_022151926.1	2.51e-58	87.88	uncharacterized protein LOC111019780 [Momordica charantia]	[more]

BLAST of IVF0016509 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G43260.1	6.5e-40	77.08	chaperone protein dnaJ-related	[more]
AT3G44020.1	5.7e-04	40.38	thylakoid lumenal P17.1 protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 77..100
None	No IPR available	PANTHER	PTHR34687:SF4	BNAC09G17400D PROTEIN	coord: 1..96
None	No IPR available	PANTHER	PTHR34687	CHAPERONE PROTEIN DNAJ-LIKE PROTEIN	coord: 1..96

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0016509.1	IVF0016509.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane