IVF0016427 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTTCCATATTATGATGATCAGTCCTATGTGTTCGGCAAAGATCAGGCTACAAGAGCACATTTAGAGACCTTTGTTGATGTGAGGTTTAATGTGCCAAACAATTTCGATGGTGTTCCCCTTGGTGATTCACACGATCCGAAGATCCTGATGATATATATCCAGACAGTGGATATGTTACCAGATGAAATGTTGGGAACACGGGTAGGTCGATCAAGTGAAGGAAAAAAATGTTTCAAGTGGAAGCAAGAGGAAATGAGGTGGCCAATTGTTTGA ATGTTTCCATATTATGATGATCAGTCCTATGTGTTCGGCAAAGATCAGGCTACAAGAGCACATTTAGAGACCTTTGTTGATGTGAGGTTTAATGTGCCAAACAATTTCGATGGTGTTCCCCTTGGTGATTCACACGATCCGAAGATCCTGATGATATATATCCAGACAGTGGATATGTTACCAGATGAAATGTTGGGAACACGGGTAGGTCGATCAAGTGAAGGAAAAAAATGTTTCAAGTGGAAGCAAGAGGAAATGAGGTGGCCAATTGTTTGA ATGTTTCCATATTATGATGATCAGTCCTATGTGTTCGGCAAAGATCAGGCTACAAGAGCACATTTAGAGACCTTTGTTGATGTGAGGTTTAATGTGCCAAACAATTTCGATGGTGTTCCCCTTGGTGATTCACACGATCCGAAGATCCTGATGATATATATCCAGACAGTGGATATGTTACCAGATGAAATGTTGGGAACACGGGTAGGTCGATCAAGTGAAGGAAAAAAATGTTTCAAGTGGAAGCAAGAGGAAATGAGGTGGCCAATTGTTTGA MFPYYDDQSYVFGKDQATRAHLETFVDVRFNVPNNFDGVPLGDSHDPKILMIYIQTVDMLPDEMLGTRVGRSSEGKKCFKWKQEEMRWPIV Homology
BLAST of IVF0016427 vs. ExPASy TrEMBL
Match: A0A5D3DS65 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G001260 PE=4 SV=1) HSP 1 Score: 149.8 bits (377), Expect = 5.4e-33 Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0
BLAST of IVF0016427 vs. ExPASy TrEMBL
Match: A0A5A7SQU2 (Putative nuclease HARBI1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold472G00070 PE=3 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 5.8e-19 Identity = 51/78 (65.38%), Postives = 56/78 (71.79%), Query Frame = 0
BLAST of IVF0016427 vs. ExPASy TrEMBL
Match: A0A5D3CVB7 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold477G00360 PE=4 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 3.8e-18 Identity = 50/78 (64.10%), Postives = 55/78 (70.51%), Query Frame = 0
BLAST of IVF0016427 vs. ExPASy TrEMBL
Match: A0A5A7USN6 (Putative nuclease HARBI1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G00100 PE=3 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 5.4e-17 Identity = 48/78 (61.54%), Postives = 55/78 (70.51%), Query Frame = 0
BLAST of IVF0016427 vs. ExPASy TrEMBL
Match: A0A5A7U0H7 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold648G002060 PE=4 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 2.1e-16 Identity = 47/78 (60.26%), Postives = 54/78 (69.23%), Query Frame = 0
BLAST of IVF0016427 vs. NCBI nr
Match: KAA0067395.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK26536.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 149 bits (375), Expect = 4.28e-44 Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0
BLAST of IVF0016427 vs. NCBI nr
Match: KAA0042340.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK15465.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 99.8 bits (247), Expect = 1.02e-23 Identity = 50/78 (64.10%), Postives = 55/78 (70.51%), Query Frame = 0
BLAST of IVF0016427 vs. NCBI nr
Match: KAA0033290.1 (putative nuclease HARBI1 [Cucumis melo var. makuwa] >TYK14818.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]) HSP 1 Score: 102 bits (254), Expect = 4.60e-23 Identity = 51/78 (65.38%), Postives = 56/78 (71.79%), Query Frame = 0
BLAST of IVF0016427 vs. NCBI nr
Match: KAA0056515.1 (putative nuclease HARBI1 [Cucumis melo var. makuwa] >TYK12085.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]) HSP 1 Score: 95.9 bits (237), Expect = 2.23e-21 Identity = 48/78 (61.54%), Postives = 55/78 (70.51%), Query Frame = 0
BLAST of IVF0016427 vs. NCBI nr
Match: KGN66659.1 (hypothetical protein Csa_007642 [Cucumis sativus]) HSP 1 Score: 90.9 bits (224), Expect = 3.40e-21 Identity = 43/64 (67.19%), Postives = 50/64 (78.12%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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