IVF0016424 (gene) Melon (IVF77) v1

Overview


Name	IVF0016424
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Unknown protein
Location	chr06: 1091687 .. 1091860 (-)
RNA-Seq Expression	IVF0016424
Synteny	IVF0016424

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAGAAATCGCAACAGAAAAAAGAAGAGAGAAAGAAGAAATACGATGGAAAGAGATCGCAGCAGAAGAAAAAAGAAAAAGAAAGACGATGAAAGAAATCGCAGGAGGAAGACGATGAAAGAAATCGCGAGGAAGAGAAAAAAGATGGAAGGGAAAACCTGGAATATTTAA

mRNA sequence

ATGGAAAGAAATCGCAACAGAAAAAAGAAGAGAGAAAGAAGAAATACGATGGAAAGAGATCGCAGCAGAAGAAAAAAGAAAAAGAAAGACGATGAAAGAAATCGCAGGAGGAAGACGATGAAAGAAATCGCGAGGAAGAGAAAAAAGATGGAAGGGAAAACCTGGAATATTTAA

Coding sequence (CDS)

ATGGAAAGAAATCGCAACAGAAAAAAGAAGAGAGAAAGAAGAAATACGATGGAAAGAGATCGCAGCAGAAGAAAAAAGAAAAAGAAAGACGATGAAAGAAATCGCAGGAGGAAGACGATGAAAGAAATCGCGAGGAAGAGAAAAAAGATGGAAGGGAAAACCTGGAATATTTAA

Protein sequence

MERNRNRKKKRERRNTMERDRSRRKKKKKDDERNRRRKTMKEIARKRKKMEGKTWNI

Homology

The following BLAST results are available for this feature:

BLAST of IVF0016424 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0016424 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0016424 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0016424 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 29..49
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..44
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..57
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 13..27

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0016424.2	IVF0016424.2	mRNA