IVF0016395 (gene) Melon (IVF77) v1

Overview


Name	IVF0016395
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Transposase
Location	chr05: 10387812 .. 10388143 (-)
RNA-Seq Expression	IVF0016395
Synteny	IVF0016395

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCAACAATCAAGCTTTGGACGTGAAATTGGACAAACTGCTTCTAGAGGTTGGAGGTCTGAGAAATATGTTGAAAGATAAGGAAAGTGCAATAGTAAAACCAAATGAAACCATACAAAGGGATGAGAATGATGAGAATGATGGAGGTGAAGATGATAGAAATAATGGTGAAGAAGTGGAAGGGGGGATAAAGGATAGCAGGTATTTTAACATATATGTATCTGTCGTTGTAGTTTTATTAAAAAATGTATATTTTACATGCTGATTTTATTGATGATCAGGATGGGAAAATTGAAAATGAAAGTGAAGGAAAAAATGATCAATAGGTAA

mRNA sequence

ATGGCCAACAATCAAGCTTTGGACGTGAAATTGGACAAACTGCTTCTAGAGGTTGGAGGTCTGAGAAATATGTTGAAAGATAAGGAAAGTGCAATAGTAAAACCAAATGAAACCATACAAAGGGATGAGAATGATGAGAATGATGGAGGTGAAGATGATAGAAATAATGGTGAAGAAGTGGAAGGGGGGATAAAGGATAGCAGGATGGGAAAATTGAAAATGAAAGTGAAGGAAAAAATGATCAATAGGTAA

Coding sequence (CDS)

ATGGCCAACAATCAAGCTTTGGACGTGAAATTGGACAAACTGCTTCTAGAGGTTGGAGGTCTGAGAAATATGTTGAAAGATAAGGAAAGTGCAATAGTAAAACCAAATGAAACCATACAAAGGGATGAGAATGATGAGAATGATGGAGGTGAAGATGATAGAAATAATGGTGAAGAAGTGGAAGGGGGGATAAAGGATAGCAGGATGGGAAAATTGAAAATGAAAGTGAAGGAAAAAATGATCAATAGGTAA

Protein sequence

MANNQALDVKLDKLLLEVGGLRNMLKDKESAIVKPNETIQRDENDENDGGEDDRNNGEEVEGGIKDSRMGKLKMKVKEKMINR

Homology

[Close]

BLAST of IVF0016395 vs. ExPASy TrEMBL
Match: A0A5D3BRM7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold775G00800 PE=4 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 1.5e-26
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0


Query: 1  MANNQALDVKLDKLLLEVGGLRNMLKDKESAIVKPNETIQRDENDENDGGEDDRNNGEEV 60
          MANNQALDVKLDKLLLEVGGLRNMLKDKESAIVKPNETIQRDENDENDGGEDDRNNGEEV
Sbjct: 2  MANNQALDVKLDKLLLEVGGLRNMLKDKESAIVKPNETIQRDENDENDGGEDDRNNGEEV 61

Query: 61 EGGIKDSR 69
          EGGIKDSR
Sbjct: 62 EGGIKDSR 69

[Close]

BLAST of IVF0016395 vs. ExPASy TrEMBL
Match: A0A5A7TCN2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold128G001720 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.6e-12
Identity = 45/69 (65.22%), Postives = 55/69 (79.71%), Query Frame = 0


Query: 1   MANNQALDVKLDKLLLEVGGLRNMLKDKESAIVKPNETIQRDENDENDGGEDDRNNGEEV 60
           M NNQAL+VKLDKLLLE+ G +N+LK+KESA V+PNE +QRDENDEND G+  RNNGEE 
Sbjct: 91  MTNNQALNVKLDKLLLEIEGPKNLLKEKESATVEPNENMQRDENDENDRGQGVRNNGEES 150

Query: 61  EGGIKDSRM 70
             G K  ++
Sbjct: 151 GMGDKGHQL 159

[Close]

BLAST of IVF0016395 vs. ExPASy TrEMBL
Match: A0A5D3DV63 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold225G00030 PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 4.8e-12
Identity = 46/71 (64.79%), Postives = 56/71 (78.87%), Query Frame = 0


Query: 1   MANNQALDVKLDKLLLEVGGLRNMLKDKESAIVKPNETIQRDENDENDGGEDDRNNGEEV 60
           M NNQAL++KLDKL+LEV GL++MLK+KE   V+ NETIQRDEN+ENDGGE  RNNGEE+
Sbjct: 150 MINNQALNMKLDKLILEVEGLKDMLKEKERETVELNETIQRDENNENDGGEGHRNNGEEM 209

Query: 61  EGGIKDSRMGK 72
               K  + GK
Sbjct: 210 GMRDKGEQDGK 220

[Close]

BLAST of IVF0016395 vs. ExPASy TrEMBL
Match: A0A5A7UQS8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold319G001240 PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 4.8e-12
Identity = 46/71 (64.79%), Postives = 56/71 (78.87%), Query Frame = 0


Query: 1   MANNQALDVKLDKLLLEVGGLRNMLKDKESAIVKPNETIQRDENDENDGGEDDRNNGEEV 60
           M NNQAL++KLDKL+LEV GL++MLK+KE   V+ NETIQRDEN+ENDGGE  RNNGEE+
Sbjct: 188 MINNQALNMKLDKLILEVEGLKDMLKEKERETVELNETIQRDENNENDGGEGHRNNGEEM 247

Query: 61  EGGIKDSRMGK 72
               K  + GK
Sbjct: 248 GMRDKGEQDGK 258

[Close]

BLAST of IVF0016395 vs. ExPASy TrEMBL
Match: A0A5A7TWM9 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold363G00090 PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 1.4e-11
Identity = 43/59 (72.88%), Postives = 51/59 (86.44%), Query Frame = 0


Query: 1   MANNQALDVKLDKLLLEVGGLRNMLKDKESAIVKPNETIQRDENDENDGGEDDRNNGEE 60
           MANNQAL+VKLDKLLL++ GL+N+LK+KESA V+PNE IQR   DENDG + DRNNGEE
Sbjct: 361 MANNQALNVKLDKLLLKIEGLKNLLKEKESATVEPNENIQR---DENDGDQGDRNNGEE 416

[Close]

BLAST of IVF0016395 vs. NCBI nr
Match: TYK01750.1 (hypothetical protein E5676_scaffold775G00800 [Cucumis melo var. makuwa])

HSP 1 Score: 129 bits (323), Expect = 4.77e-37
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0


Query: 1  MANNQALDVKLDKLLLEVGGLRNMLKDKESAIVKPNETIQRDENDENDGGEDDRNNGEEV 60
          MANNQALDVKLDKLLLEVGGLRNMLKDKESAIVKPNETIQRDENDENDGGEDDRNNGEEV
Sbjct: 2  MANNQALDVKLDKLLLEVGGLRNMLKDKESAIVKPNETIQRDENDENDGGEDDRNNGEEV 61

Query: 61 EGGIKDSR 68
          EGGIKDSR
Sbjct: 62 EGGIKDSR 69

[Close]

BLAST of IVF0016395 vs. NCBI nr
Match: TYK27677.1 (uncharacterized protein E5676_scaffold225G00030 [Cucumis melo var. makuwa])

HSP 1 Score: 81.6 bits (200), Expect = 2.06e-16
Identity = 43/60 (71.67%), Postives = 52/60 (86.67%), Query Frame = 0


Query: 1   MANNQALDVKLDKLLLEVGGLRNMLKDKESAIVKPNETIQRDENDENDGGEDDRNNGEEV 60
           M NNQAL++KLDKL+LEV GL++MLK+KE   V+ NETIQRDEN+ENDGGE  RNNGEE+
Sbjct: 150 MINNQALNMKLDKLILEVEGLKDMLKEKERETVELNETIQRDENNENDGGEGHRNNGEEM 209

[Close]

BLAST of IVF0016395 vs. NCBI nr
Match: KAA0041214.1 (hypothetical protein E6C27_scaffold128G001720 [Cucumis melo var. makuwa])

HSP 1 Score: 82.4 bits (202), Expect = 3.29e-16
Identity = 43/59 (72.88%), Postives = 51/59 (86.44%), Query Frame = 0


Query: 1   MANNQALDVKLDKLLLEVGGLRNMLKDKESAIVKPNETIQRDENDENDGGEDDRNNGEE 59
           M NNQAL+VKLDKLLLE+ G +N+LK+KESA V+PNE +QRDENDEND G+  RNNGEE
Sbjct: 91  MTNNQALNVKLDKLLLEIEGPKNLLKEKESATVEPNENMQRDENDENDRGQGVRNNGEE 149

[Close]

BLAST of IVF0016395 vs. NCBI nr
Match: KAA0055985.1 (uncharacterized protein E6C27_scaffold319G001240 [Cucumis melo var. makuwa])

HSP 1 Score: 81.6 bits (200), Expect = 3.35e-16
Identity = 43/60 (71.67%), Postives = 52/60 (86.67%), Query Frame = 0


Query: 1   MANNQALDVKLDKLLLEVGGLRNMLKDKESAIVKPNETIQRDENDENDGGEDDRNNGEEV 60
           M NNQAL++KLDKL+LEV GL++MLK+KE   V+ NETIQRDEN+ENDGGE  RNNGEE+
Sbjct: 188 MINNQALNMKLDKLILEVEGLKDMLKEKERETVELNETIQRDENNENDGGEGHRNNGEEM 247

[Close]

BLAST of IVF0016395 vs. NCBI nr
Match: KAA0047364.1 (transposase [Cucumis melo var. makuwa] >TYK14041.1 transposase [Cucumis melo var. makuwa])

HSP 1 Score: 79.7 bits (195), Expect = 3.71e-15
Identity = 43/59 (72.88%), Postives = 51/59 (86.44%), Query Frame = 0


Query: 1   MANNQALDVKLDKLLLEVGGLRNMLKDKESAIVKPNETIQRDENDENDGGEDDRNNGEE 59
           MANNQAL+VKLDKLLL++ GL+N+LK+KESA V+PNE IQRDEND   G + DRNNGEE
Sbjct: 361 MANNQALNVKLDKLLLKIEGLKNLLKEKESATVEPNENIQRDEND---GDQGDRNNGEE 416

The following BLAST results are available for this feature:

BLAST of IVF0016395 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0016395 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BRM7	1.5e-26	100.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7TCN2	1.6e-12	65.22	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3DV63	4.8e-12	64.79	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7UQS8	4.8e-12	64.79	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7TWM9	1.4e-11	72.88	Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold363G00090 PE...	[more]

BLAST of IVF0016395 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK01750.1	4.77e-37	100.00	hypothetical protein E5676_scaffold775G00800 [Cucumis melo var. makuwa]	[more]
TYK27677.1	2.06e-16	71.67	uncharacterized protein E5676_scaffold225G00030 [Cucumis melo var. makuwa]	[more]
KAA0041214.1	3.29e-16	72.88	hypothetical protein E6C27_scaffold128G001720 [Cucumis melo var. makuwa]	[more]
KAA0055985.1	3.35e-16	71.67	uncharacterized protein E6C27_scaffold319G001240 [Cucumis melo var. makuwa]	[more]
KAA0047364.1	3.71e-15	72.88	transposase [Cucumis melo var. makuwa] >TYK14041.1 transposase [Cucumis melo var...	[more]

BLAST of IVF0016395 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 32..83
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 56..83

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0016395.1	IVF0016395.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046983	protein dimerization activity