IVF0016387 (gene) Melon (IVF77) v1

Overview


Name	IVF0016387
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	protochlorophyllide-dependent translocon component 52, chloroplastic-like
Location	chr02: 3017103 .. 3022169 (-)
RNA-Seq Expression	IVF0016387
Synteny	IVF0016387

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTCCGACGACGTCGTGACTTCGGAACGACGGACGATGGAGGAGGAGAAGTTCGATTGGTTTTCGGAGTGGTATCCGGTGATGCCGGTGTGCGATTTGGACAAGAAAGTACCGACTGGGAAGAAGGTTTTGGGGTTGGATTTGGTGGTGTGGTGGGATAGGAATGAGAATGCGTGGAAGGTGTTTGATGATAGTTGTCCACATAGATTAGCGCCATTGTCGGAAGGGAGGATCGATCAGTGGGGGAGATTACAGTGTGTATACCATGGATGGTGCTTTAATGGCTCCGGTGATTGTAAATTCATCCCCCAAGCGCCCCCCGACGGCCCTCCGGTAATCATTTTAGTCTCTTTTTCCTTTCTAATGTTTGTTTTGGTATTACTTCAAAAAAAAATTTCTTGATAACGAGACAGAGATGTTTTTGAAGGAAGTTGAAATTTTGGACACTCCGTTCTGAAAATTGTTCTTTTTCTATTTTTGGAACCTATGAAAGTGATGGTAATTATAAGAAGCTTTTGAGGGTTAATCACTTTTTGGAACCTATGAAAGCTTTTAAGGTTTTGATGATTATGTTCATTTCATAGTTTTAAAAATAAAACTTTTTTATAAGAATAGTCTCCAGTTTGGTTCTTTATATTTTTAAAAATAGATTTGATTTCTCATATAATTTTATAATTTTATTTTAAATAAGTATATGAATAATTTCTAAAAATTATATCCTCTCTAAAACTATTTTTTAATTTTAAATATCATATAATTATTTTTAAAAATCAAATATAAAACAAGGACTAAAATGATACATTTTGAAAAGTCCGATAACTAAAAGATTCATGGAAAAAAAAAAACATATATTCATCAAAACCCGGAGGAGAGAGTTCTTTTAACTTTAGGTACCTTTTTTATGGAATCTTACTATCCAAGATGAGAACTTAGATTCACCTAATTTCTTTCAATTTTTTTTTTTTGTTAATCTTTTCACAATTTAAAAATACCAGAAATTTGGAAAGATAGTGGGTAAATCAAAATTCTGATAAATGTAAAATCAAATTAGAAATGGGTAGAAACATAAATTAGGTATAAGAAATTTGGGAAGATTTCATAATGTGGGTTTGTCCCATGCAAGATTATATCAAGAAAGCCTATAATTATCAAATATCTTAAGACTTTTTTAGTACAAATTTGCTTGTAAATGAACACTAAGATCAACCTTTCTTGGTAAAATTTTGGTTGGGATAAAATTTGTCCCATTTATGTTTCCACAAATTTTCAAATTGATTTATTGATTTATCTAAATGACATTATCAACTATCTAAATGAACTGAGAAAAGCTATTTTAACAGTTTCTAATTGAGAAAATAGAAAAAAGAAAAAGGGAGGAGTCCATATTTGGAAGGGTTAACCGTTGCAAATCTCTTTTTCTCCATATTTGGTTGATGTTTTTTCCCTTAGGTGTGTTAGCCTTTTCAGTGCTTTGCAGCATTAAGTTTTAGCTGACGAGTTCTTCACGGTCGCTATCACGTTGGACAGAGTTGCGAGGTAGTTGTCTTTCACTTGCTGGGTCTTTTGTTGCATTATTTGTTGGATGGTGGAGGAAGGGTTGGACCATATTGTCTAGCACTGTGATTTGGTAGTACCTTTTAAGATTCCTTTTCTTTTTTCTTTTTACTGCAGACGTTTGGTATGACGTTTGTTAGTATCAGCGATGTTAGTGCTATGATTGAGGACTGCCTTACGGGAAGAAGGGTTCTGTGTGTGTGTGTTCTTTTTTCTCTATAAATATGGCCGAAGGGGTTTGTTTTTGTGAGAGATGTAAATTGGTTGGGTTGGATAACACATATTTTTGGATTGTTTGGGTCAGTCCGAGTAATTGGAATAATATTCTCAAGCCATATGGTTGGATTGGGTTGTCGGATTGTATTGTTCCACTAACTCGAAAGCAATTCATTGACTTCAAATAAATAATTTGGAAGCAACCTATCAGAACGCTGGAGCTGACAACGCCGACATTCCGGCTCTTGTGCCCTTTCCATTTCTTTTGTGAATCAGAATGAGAGTATGATAATCGGATGTCTTTTCACTTACCGCTGCCCACTGGTCGGAGATGAGTGCAGTGAGGCCGAGACGAGAGGGTGAGTCATATATATAAATATATATAATTCAGGTTGGGTTGGGTCGTTGAACCAAAATTTTAACCCCCAATCCGAGACCCAACCCAAAAAAAAAAAAAAAAAAAAAACGAAAAAGGAATAACTCAATCCAACCCAAATTTTAAAATAACCTAACCCTTATCACATGGGTTGGATAGTTCGAGATGTCGGATTATTCTTACCTCCCTACTTATGGGAGTCTTTTAGGGAGAGCGGAATAGTAAGGTGTTTGTGGGGGTTGAAAGAAATTTAGGAAATTTGGTCCCTAGGGTCCCATTTGGTAACGTTTTTGTTGTATGTTTTTTGTTTTTTTGTTTCTTGTTCCCTGATTCTTTTTTTAGAACAAAAAACATGAATGTGTATGATAACTATTTCTATTTTTTTGTTTCTTGAAATAAAGAAACATAAATAGAAAATGTGTTTGATAACTGCTTTTTGTTTTCTGATTTTCTTCAACATTTATTTTTTATTTTATTTTTGTTATTTTATTAACATCTAACTCTTAAACGTTAAAAAAAATATGTCCTCCATTAAACATAAAAAATAAAATTATCAAAAGTTTATTAATTTAATACAAAAGAATTACCTGTGCACAAATAAAAATAATAGTATAAACATAAAATTGTATGTATCCTTCAAAATTTTGTATATCTTCAACGATCATTGATTCATTGCTAAAGTCATTGAATATATTATCTTGATGATCATTCTATCTAATATAATTGTGAATTGTGCAACATGCTATCATTATATAATTTTGTGTCTTGATCGGGTACGGAGATATTTGCTTAAGAATAGGAAATCGAGCCTTCAACAGTTCAATGACATTTCAAAGTGAAGAATGTTGATAGTTAAACCCTTCTTCTTTACCTCGAGGGCAATGTCTCTTTCTCTAAAATCTCGTAAATGATTACTTTGATCATGAAACGGTGCTAAAAATCCTGACATATTTGAATATTCTGAATCGACAAGATAGTATTAATATGCATATAATAAAACAAATAAAAAATTATCATAAAGTCATCCATTTCATTTAAAGTTCTAAAAACCCTCTTATTATTCTCGGGGTTATTGATGCGTTTAAGAAGTATGCGAGAATCATTAGCCGATCATTCCCAACTAGACATAACATACGTGAATAACATATCAAATGAACAGACACACATCAAATGATATCGACAAGTTTGCTCATGTTTCTACGTGAACTTCAATTTCATAGGAACTATCTCGTATAGTTGGAGTCCTTGTAAAAGGAGCTCCCTTTTATGTAGGCTTGTTTTTTTGGAATGCTAGTGTACTTTTTCATTTTTTTTTAACTAAAGTTGTTCCATTAAAACAATAACAACAACATCTTTAACTTCGAAGCATTAGTTGATAGTTAAGACATCTCTTACCATAGAGTAATTGGTCTGAATTCTCACCTTCATATTTGTGAAGTAATGTTTTAAAAACATGCACATATTATATCATATTATTGAGAATAACCATTTTGAATTCACAAATATTATGAACATTTACCTCAATTGCAGGTTCACTCGTCCAAGAAGGCATGTGCCGCTGTATATCCGAGCACGATGCAGAACGGCATAGTATGGTTCTGGCCAAACTTGGATCCCAAATTCAAAGATATTATTATGGAGAAGAAACCTCCCTTTATTCCGGAGCTAGATGACCCATCTTACGTCAAGTTAGAGGGCAATAGGGATATGGCATACGGGTAAGCATTTCAGTTCTTTTTTCTGATTCTTGGTGCATTTTGAAATGTCAAATGGAAAGAGCTAAAGCAAAATGAATCAAAATTCTGTTCACTCATTCTAGTCAATGTTTCAAAAAACTATTTAGGCTTATGCCTTGAGGCACAATTTTAAGTTTTTGCCTCGAGACTTATGCCTTCTTCATTGAACCATAAGAGGCTTATGCCTCTCATAGAAGATGATTATGCCTTCGTCAAAATGCATCGAGGATTAAAATCTACATGCCTCGTCTCTAATGATTAATTAGAAAAAGATTAGTGATTTGCCTGACTTTTTTAAAAAATATATTAAGGTTTGAGGTGTGACAATTTGAGTTAGGACTTCTTTCATTGTTTTTAAGGAAAAAATTTGTAGTGTAAATCAGTCCTATTAATGATAATAGTAGTAGTGATGATGAAGATATCCTTTTAGAATTGTTTATTAAGTGAAAAATTGTGGGGTGAATTTTCTTTTCACACTTTTGTATGACAATCATGTTTAGCAGACTACGGCATACCAATTTAGGACTTTTTTAAAATGCTTTTTGTTCACTGGAAAAGTTTCAAGACTGCGTTTAGCATTTTAAACCATTGATTCTTGTGTCTGAATTTAGAGAATAACTATCTGTATGCATTCATGGATCAAATTGGCGCTGTCATTGATATTCACACCATGATTTCCAAAAGATAGTTAACGACCTTCGTAAGACTAAACCGGTGTCTGAATGAAAACTGGAGTGTAACAAGAAGGTGTAATGCTTTTGTGTAATTGTTGACGTGATTAGCCTCTAGATAATGTTTTGGATTAGAATGAGAAGGAAACTGGTGTTGAGGCTGTGGACTGTTGAATATATCTTAATTCATTCAAGTATACCGATGATTTAATACGGTATAAGAAAAGTAAATTGCGAGTTTGAAGTCCTATAATGTCATTTAGTAGTGATATCCTAATTCGATTACTTTGTCATTGAAAATTGGAGTTTCCAGGTACGAGGTACTGATTGAAAATCTCATGGACCTTGCCCATCTTCCATACGCTCACTACGGGATAATTCCAGCCCCGCCACCAATGAAAAACAGATATCATTGCCAACTTTTTCTTCTCAACTCTTGCATTTGAAGATCTTACAAGGATTGCTTTGACTAACAACAAGCATGTGTTCATTCATTCACAGTGAACACTGA

mRNA sequence

ATGGCGTCCGACGACGTCGTGACTTCGGAACGACGGACGATGGAGGAGGAGAAGTTCGATTGGTTTTCGGAGTGGTATCCGGTGATGCCGGTGTGCGATTTGGACAAGAAAGTACCGACTGGGAAGAAGGTTTTGGGGTTGGATTTGGTGGTGTGGTGGGATAGGAATGAGAATGCGTGGAAGGTGTTTGATGATAGTTGTCCACATAGATTAGCGCCATTGTCGGAAGGGAGGATCGATCAGTGGGGGAGATTACAGTGTGTATACCATGGATGGTGCTTTAATGGCTCCGGTGATTGTAAATTCATCCCCCAAGCGCCCCCCGACGGCCCTCCGGTTCACTCGTCCAAGAAGGCATGTGCCGCTGTATATCCGAGCACGATGCAGAACGGCATAGTATGGTTCTGGCCAAACTTGGATCCCAAATTCAAAGATATTATTATGGAGAAGAAACCTCCCTTTATTCCGGAGCTAGATGACCCATCTTACGTCAAGTTAGAGGGCAATAGGGATATGGCATACGGTGAACACTGA

Coding sequence (CDS)

ATGGCGTCCGACGACGTCGTGACTTCGGAACGACGGACGATGGAGGAGGAGAAGTTCGATTGGTTTTCGGAGTGGTATCCGGTGATGCCGGTGTGCGATTTGGACAAGAAAGTACCGACTGGGAAGAAGGTTTTGGGGTTGGATTTGGTGGTGTGGTGGGATAGGAATGAGAATGCGTGGAAGGTGTTTGATGATAGTTGTCCACATAGATTAGCGCCATTGTCGGAAGGGAGGATCGATCAGTGGGGGAGATTACAGTGTGTATACCATGGATGGTGCTTTAATGGCTCCGGTGATTGTAAATTCATCCCCCAAGCGCCCCCCGACGGCCCTCCGGTTCACTCGTCCAAGAAGGCATGTGCCGCTGTATATCCGAGCACGATGCAGAACGGCATAGTATGGTTCTGGCCAAACTTGGATCCCAAATTCAAAGATATTATTATGGAGAAGAAACCTCCCTTTATTCCGGAGCTAGATGACCCATCTTACGTCAAGTTAGAGGGCAATAGGGATATGGCATACGGTGAACACTGA

Protein sequence

MASDDVVTSERRTMEEEKFDWFSEWYPVMPVCDLDKKVPTGKKVLGLDLVVWWDRNENAWKVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHSSKKACAAVYPSTMQNGIVWFWPNLDPKFKDIIMEKKPPFIPELDDPSYVKLEGNRDMAYGEH

Homology

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BLAST of IVF0016387 vs. ExPASy Swiss-Prot
Match: Q8W496 (Protochlorophyllide-dependent translocon component 52, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PTC52 PE=2 SV=1)

HSP 1 Score: 307.4 bits (786), Expect = 1.1e-82
Identity = 124/159 (77.99%), Postives = 143/159 (89.94%), Query Frame = 0


Query: 17  EKFDWFSEWYPVMPVCDLDKKVPTGKKVLGLDLVVWWDRNENAWKVFDDSCPHRLAPLSE 76
           +KFDW++ WYPVMP+CDLDKKVP GKKV+G+DLVVWWDRNE  WKV DD+CPHRLAPLS+
Sbjct: 77  DKFDWYANWYPVMPICDLDKKVPHGKKVMGIDLVVWWDRNEKQWKVMDDTCPHRLAPLSD 136

Query: 77  GRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHSSKKACAAVYPSTMQNGIVWFW 136
           GRIDQWGRLQCVYHGWCFNGSGDCK IPQAPPDGPPVH+ K+AC AVYPST+Q+ I+WFW
Sbjct: 137 GRIDQWGRLQCVYHGWCFNGSGDCKLIPQAPPDGPPVHTFKQACVAVYPSTVQHEIIWFW 196

Query: 137 PNLDPKFKDIIMEKKPPFIPELDDPSYVKLEGNRDMAYG 176
           PN DPK+K+II   KPP+IPEL+DPS+ KL GNRD+ YG
Sbjct: 197 PNSDPKYKNIIETNKPPYIPELEDPSFTKLMGNRDIPYG 235

[Close]

BLAST of IVF0016387 vs. ExPASy Swiss-Prot
Match: Q0DV66 (Pheophorbide a oxygenase, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=PAO PE=2 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 2.3e-40
Identity = 80/171 (46.78%), Postives = 102/171 (59.65%), Query Frame = 0


Query: 8   TSERRTMEEEKFDWFSEWYPVMPVCDLDKKVPTGKKVLGLDLVVWWDRNENAWKVFDDSC 67
           T    +  +EKF W   WYPV  V DLD  VPT  ++L  DLV+W D     W   DD C
Sbjct: 65  TEPSTSSADEKFVWRDHWYPVSLVEDLDPSVPTPFQLLNRDLVIWKDPKSGEWVALDDRC 124

Query: 68  PHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHS--SKKACAAVYP 127
           PHRLAPLSEGRID+ G LQC YHGW F+GSG C  IPQA P+GP   +  S KACA  +P
Sbjct: 125 PHRLAPLSEGRIDETGCLQCSYHGWSFDGSGACTRIPQAAPEGPEAKAVRSPKACAIKFP 184

Query: 128 STMQNGIVWFWPNLDPKFKDIIMEKKPPFIP-ELDDPSYVKLEGNRDMAYG 176
           + +  G+++ WP  D    +     KPP +P E +DP++  +   RD+ YG
Sbjct: 185 TLVSQGLLFVWP--DENGWEKATATKPPMLPKEFEDPAFSTVTIQRDLYYG 233

[Close]

BLAST of IVF0016387 vs. ExPASy Swiss-Prot
Match: Q9FYC2 (Pheophorbide a oxygenase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAO PE=1 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 1.1e-39
Identity = 81/180 (45.00%), Postives = 104/180 (57.78%), Query Frame = 0


Query: 8   TSERRTMEE---------EKFDWFSEWYPVMPVCDLDKKVPTGKKVLGLDLVVWWDRNEN 67
           T E+R  EE          +F W   WYPV  V DLD  VPT  ++LG DLV+W+DRN+ 
Sbjct: 62  TEEKRIEEEYGGDKEEEGSEFKWRDHWYPVSLVEDLDPNVPTPFQLLGRDLVLWFDRNDQ 121

Query: 68  AWKVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHS--S 127
            W  FDD CPHRLAPLSEGR+D+ G LQC YHGW F G G C  IPQA   GP   +  S
Sbjct: 122 KWAAFDDLCPHRLAPLSEGRLDENGHLQCSYHGWSFGGCGSCTRIPQAATSGPEARAVKS 181

Query: 128 KKACAAVYPSTMQNGIVWFWPNLDPKFKDIIMEKKPPFIP-ELDDPSYVKLEGNRDMAYG 176
            +ACA  +P+ +  G+++ WP  D    D     +PP +P + D P +  +   RD+ YG
Sbjct: 182 PRACAIKFPTMVSQGLLFVWP--DENGWDRANSIEPPRLPDDFDKPEFSTVTIQRDLFYG 239

[Close]

BLAST of IVF0016387 vs. ExPASy Swiss-Prot
Match: O49931 (Protein TIC 55, chloroplastic OS=Pisum sativum OX=3888 GN=TIC55 PE=1 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 6.6e-24
Identity = 61/177 (34.46%), Postives = 89/177 (50.28%), Query Frame = 0


Query: 15  EEEKFDWFSEWYPVMPVCDLDKKVPTGKKVLGLDLVVWWDRNENAWKVFDDSCPHRLAPL 74
           E   +DW  EWYP+    ++    P G KV   ++V++ D N+  ++ ++D CPHRLA L
Sbjct: 93  EVADYDWTEEWYPLYLTKNVPHDAPLGLKVYDKNIVLFRDGNDQ-FQCYEDRCPHRLAKL 152

Query: 75  SEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHSSKKACAAVYPSTMQNGIVW 134
           SEG++   GRL+C+YHGW F G G C  IPQ P D       K AC   Y      G++W
Sbjct: 153 SEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPAD---AKIPKSACVKTYEVRDSQGVLW 212

Query: 135 FW------PNLD----------PKFKDIIMEKKPPF-----IPELDDPSYVKLEGNR 171
            W      PN+           P F+DI    + P+     +  L DP++V +  +R
Sbjct: 213 VWMSRKTPPNVSKIPWFENFARPGFQDISTTHELPYDHSILLENLMDPAHVPISHDR 264

[Close]

BLAST of IVF0016387 vs. ExPASy Swiss-Prot
Match: Q9SK50 (Protein TIC 55, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC55 PE=1 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 9.5e-23
Identity = 61/182 (33.52%), Postives = 87/182 (47.80%), Query Frame = 0


Query: 10  ERRTMEEEKFDWFSEWYPVMPVCDLDKKVPTGKKVLGLDLVVWWDRNENAWKVFDDSCPH 69
           E + +E   +DW  EWYP+    ++ +  P G  V    +V++ D  E   + ++D CPH
Sbjct: 73  EEKRVEVADYDWTEEWYPLYLTKNVPEDAPLGLTVYDRQIVLYKD-GEGTLRCYEDRCPH 132

Query: 70  RLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHSSKKACAAVYPSTMQ 129
           RLA LSEG++   GRL+C+YHGW F G G C  IPQ P         K AC   Y     
Sbjct: 133 RLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPAS---AKIPKAACVKTYEVKDS 192

Query: 130 NGIVWFW------PNLD----------PKFKDIIMEKKPPF-----IPELDDPSYVKLEG 171
            G+VW W      PN +          P F DI    + P+     +  L DP++V +  
Sbjct: 193 QGVVWVWMSTKTPPNPEKLPWFENFARPGFFDISTTHELPYDHSILLENLMDPAHVPISH 249

[Close]

BLAST of IVF0016387 vs. ExPASy TrEMBL
Match: A0A5D3CD90 (Protochlorophyllide-dependent translocon component 52 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G00860 PE=4 SV=1)

HSP 1 Score: 396.4 bits (1017), Expect = 6.4e-107
Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 0


Query: 1   MASDDVVTSERRTMEEEKFDWFSEWYPVMPVCDLDKKVPTGKKVLGLDLVVWWDRNENAW 60
           MASDDVVTSERRTMEEEKFDWFSEWYPVMPVCDLDKKVPTGKKVLGLDLVVWWDRNENAW
Sbjct: 52  MASDDVVTSERRTMEEEKFDWFSEWYPVMPVCDLDKKVPTGKKVLGLDLVVWWDRNENAW 111

Query: 61  KVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHSSKKAC 120
           KVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHSSKKAC
Sbjct: 112 KVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHSSKKAC 171

Query: 121 AAVYPSTMQNGIVWFWPNLDPKFKDIIMEKKPPFIPELDDPSYVKLEGNRDMAYG 176
           AAVYPSTMQNGIVWFWPNLDPKFKDIIMEKKPPFIPELDDPSYVKLEGNRDMAYG
Sbjct: 172 AAVYPSTMQNGIVWFWPNLDPKFKDIIMEKKPPFIPELDDPSYVKLEGNRDMAYG 226

[Close]

BLAST of IVF0016387 vs. ExPASy TrEMBL
Match: A0A1S3BRB5 (protochlorophyllide-dependent translocon component 52, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103492438 PE=4 SV=1)

HSP 1 Score: 396.4 bits (1017), Expect = 6.4e-107
Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 0


Query: 1   MASDDVVTSERRTMEEEKFDWFSEWYPVMPVCDLDKKVPTGKKVLGLDLVVWWDRNENAW 60
           MASDDVVTSERRTMEEEKFDWFSEWYPVMPVCDLDKKVPTGKKVLGLDLVVWWDRNENAW
Sbjct: 52  MASDDVVTSERRTMEEEKFDWFSEWYPVMPVCDLDKKVPTGKKVLGLDLVVWWDRNENAW 111

Query: 61  KVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHSSKKAC 120
           KVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHSSKKAC
Sbjct: 112 KVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHSSKKAC 171

Query: 121 AAVYPSTMQNGIVWFWPNLDPKFKDIIMEKKPPFIPELDDPSYVKLEGNRDMAYG 176
           AAVYPSTMQNGIVWFWPNLDPKFKDIIMEKKPPFIPELDDPSYVKLEGNRDMAYG
Sbjct: 172 AAVYPSTMQNGIVWFWPNLDPKFKDIIMEKKPPFIPELDDPSYVKLEGNRDMAYG 226

[Close]

BLAST of IVF0016387 vs. ExPASy TrEMBL
Match: A0A0A0M2F3 (Rieske domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G600160 PE=4 SV=1)

HSP 1 Score: 394.0 bits (1011), Expect = 3.2e-106
Identity = 174/177 (98.31%), Postives = 174/177 (98.31%), Query Frame = 0


Query: 1   MASDDVVTSERRTMEEEKFDWFSEWYPVMPVCDLDKKVPTGKKVLGLDLVVWWDRNENAW 60
           MASDDVVTSERR MEEEKFDWFSEWYPVMPVCDLDKKVP GKKVLGLDLVVWWDRNENAW
Sbjct: 54  MASDDVVTSERRKMEEEKFDWFSEWYPVMPVCDLDKKVPIGKKVLGLDLVVWWDRNENAW 113

Query: 61  KVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHSSKKAC 120
           KVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHSSKKAC
Sbjct: 114 KVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHSSKKAC 173

Query: 121 AAVYPSTMQNGIVWFWPNLDPKFKDIIMEKKPPFIPELDDPSYVKLEGNRDMAYGEH 178
           AAVYPST QNGIVWFWPNLDPKFKDIIMEKKPPFIPELDDPSYVKLEGNRDMAYGEH
Sbjct: 174 AAVYPSTTQNGIVWFWPNLDPKFKDIIMEKKPPFIPELDDPSYVKLEGNRDMAYGEH 230

[Close]

BLAST of IVF0016387 vs. ExPASy TrEMBL
Match: A0A5A7UN46 (Protochlorophyllide-dependent translocon component 52 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold181G00880 PE=4 SV=1)

HSP 1 Score: 392.9 bits (1008), Expect = 7.1e-106
Identity = 173/175 (98.86%), Postives = 174/175 (99.43%), Query Frame = 0


Query: 1   MASDDVVTSERRTMEEEKFDWFSEWYPVMPVCDLDKKVPTGKKVLGLDLVVWWDRNENAW 60
           MASDDVVTSERRTME EKFDWFSEWYPVMPVCDLDKKVPTGKKVLGLDLVVWWDRNENAW
Sbjct: 52  MASDDVVTSERRTMENEKFDWFSEWYPVMPVCDLDKKVPTGKKVLGLDLVVWWDRNENAW 111

Query: 61  KVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHSSKKAC 120
           KVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHSSKKAC
Sbjct: 112 KVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHSSKKAC 171

Query: 121 AAVYPSTMQNGIVWFWPNLDPKFKDIIMEKKPPFIPELDDPSYVKLEGNRDMAYG 176
           AAVYPSTMQNGIVWFWPNLDPKFKDII+EKKPPFIPELDDPSYVKLEGNRDMAYG
Sbjct: 172 AAVYPSTMQNGIVWFWPNLDPKFKDIIIEKKPPFIPELDDPSYVKLEGNRDMAYG 226

[Close]

BLAST of IVF0016387 vs. ExPASy TrEMBL
Match: A0A0A0LX74 (Rieske domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G600180 PE=4 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 6.5e-99
Identity = 159/174 (91.38%), Postives = 168/174 (96.55%), Query Frame = 0


Query: 3   SDDVVTSERRTMEEEKFDWFSEWYPVMPVCDLDKKVPTGKKVLGLDLVVWWDRNENAWKV 62
           + DVVTSER  +EEEKFDWF+EWYPVMPVCDLDKKVP GKKVLGLDLVVWWDRNENAWKV
Sbjct: 104 ASDVVTSERPEVEEEKFDWFAEWYPVMPVCDLDKKVPIGKKVLGLDLVVWWDRNENAWKV 163

Query: 63  FDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHSSKKACAA 122
           FDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHSSKKAC A
Sbjct: 164 FDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHSSKKACVA 223

Query: 123 VYPSTMQNGIVWFWPNLDPKFKDIIMEKKPPFIPELDDPSYVKLEGNRDMAYGE 177
           +YP+T+QNGI+WFWPN DPKFKDII+EK+PPFIPELDDPSYVKLEGNRDMAYGE
Sbjct: 224 IYPTTVQNGILWFWPNSDPKFKDIILEKEPPFIPELDDPSYVKLEGNRDMAYGE 277

[Close]

BLAST of IVF0016387 vs. NCBI nr
Match: XP_008451032.1 (PREDICTED: protochlorophyllide-dependent translocon component 52, chloroplastic-like [Cucumis melo])

HSP 1 Score: 390 bits (1003), Expect = 3.11e-132
Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 0


Query: 1   MASDDVVTSERRTMEEEKFDWFSEWYPVMPVCDLDKKVPTGKKVLGLDLVVWWDRNENAW 60
           MASDDVVTSERRTMEEEKFDWFSEWYPVMPVCDLDKKVPTGKKVLGLDLVVWWDRNENAW
Sbjct: 52  MASDDVVTSERRTMEEEKFDWFSEWYPVMPVCDLDKKVPTGKKVLGLDLVVWWDRNENAW 111

Query: 61  KVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHSSKKAC 120
           KVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHSSKKAC
Sbjct: 112 KVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHSSKKAC 171

Query: 121 AAVYPSTMQNGIVWFWPNLDPKFKDIIMEKKPPFIPELDDPSYVKLEGNRDMAYG 175
           AAVYPSTMQNGIVWFWPNLDPKFKDIIMEKKPPFIPELDDPSYVKLEGNRDMAYG
Sbjct: 172 AAVYPSTMQNGIVWFWPNLDPKFKDIIMEKKPPFIPELDDPSYVKLEGNRDMAYG 226

[Close]

BLAST of IVF0016387 vs. NCBI nr
Match: KGN66706.2 (hypothetical protein Csa_007259 [Cucumis sativus])

HSP 1 Score: 388 bits (996), Expect = 1.16e-131
Identity = 174/176 (98.86%), Postives = 174/176 (98.86%), Query Frame = 0


Query: 1   MASDDVVTSERRTMEEEKFDWFSEWYPVMPVCDLDKKVPTGKKVLGLDLVVWWDRNENAW 60
           MASDDVVTSERR MEEEKFDWFSEWYPVMPVCDLDKKVPTGKKVLGLDLVVWWDRNENAW
Sbjct: 54  MASDDVVTSERRKMEEEKFDWFSEWYPVMPVCDLDKKVPTGKKVLGLDLVVWWDRNENAW 113

Query: 61  KVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHSSKKAC 120
           KVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHSSKKAC
Sbjct: 114 KVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHSSKKAC 173

Query: 121 AAVYPSTMQNGIVWFWPNLDPKFKDIIMEKKPPFIPELDDPSYVKLEGNRDMAYGE 176
           AAVYPST QNGIVWFWPNLDPKFKDIIMEKKPPFIPELDDPSYVKLEGNRDMAYGE
Sbjct: 174 AAVYPSTTQNGIVWFWPNLDPKFKDIIMEKKPPFIPELDDPSYVKLEGNRDMAYGE 229

[Close]

BLAST of IVF0016387 vs. NCBI nr
Match: KAA0055706.1 (protochlorophyllide-dependent translocon component 52 [Cucumis melo var. makuwa])

HSP 1 Score: 387 bits (994), Expect = 3.10e-131
Identity = 173/175 (98.86%), Postives = 174/175 (99.43%), Query Frame = 0


Query: 1   MASDDVVTSERRTMEEEKFDWFSEWYPVMPVCDLDKKVPTGKKVLGLDLVVWWDRNENAW 60
           MASDDVVTSERRTME EKFDWFSEWYPVMPVCDLDKKVPTGKKVLGLDLVVWWDRNENAW
Sbjct: 52  MASDDVVTSERRTMENEKFDWFSEWYPVMPVCDLDKKVPTGKKVLGLDLVVWWDRNENAW 111

Query: 61  KVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHSSKKAC 120
           KVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHSSKKAC
Sbjct: 112 KVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHSSKKAC 171

Query: 121 AAVYPSTMQNGIVWFWPNLDPKFKDIIMEKKPPFIPELDDPSYVKLEGNRDMAYG 175
           AAVYPSTMQNGIVWFWPNLDPKFKDII+EKKPPFIPELDDPSYVKLEGNRDMAYG
Sbjct: 172 AAVYPSTMQNGIVWFWPNLDPKFKDIIIEKKPPFIPELDDPSYVKLEGNRDMAYG 226

[Close]

BLAST of IVF0016387 vs. NCBI nr
Match: XP_011660063.2 (protochlorophyllide-dependent translocon component 52, chloroplastic isoform X2 [Cucumis sativus])

HSP 1 Score: 386 bits (991), Expect = 2.04e-130
Identity = 173/175 (98.86%), Postives = 173/175 (98.86%), Query Frame = 0


Query: 1   MASDDVVTSERRTMEEEKFDWFSEWYPVMPVCDLDKKVPTGKKVLGLDLVVWWDRNENAW 60
           MASDDVVTSERR MEEEKFDWFSEWYPVMPVCDLDKKVPTGKKVLGLDLVVWWDRNENAW
Sbjct: 54  MASDDVVTSERRKMEEEKFDWFSEWYPVMPVCDLDKKVPTGKKVLGLDLVVWWDRNENAW 113

Query: 61  KVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHSSKKAC 120
           KVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHSSKKAC
Sbjct: 114 KVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHSSKKAC 173

Query: 121 AAVYPSTMQNGIVWFWPNLDPKFKDIIMEKKPPFIPELDDPSYVKLEGNRDMAYG 175
           AAVYPST QNGIVWFWPNLDPKFKDIIMEKKPPFIPELDDPSYVKLEGNRDMAYG
Sbjct: 174 AAVYPSTTQNGIVWFWPNLDPKFKDIIMEKKPPFIPELDDPSYVKLEGNRDMAYG 228

[Close]

BLAST of IVF0016387 vs. NCBI nr
Match: XP_031741410.1 (protochlorophyllide-dependent translocon component 52, chloroplastic isoform X1 [Cucumis sativus])

HSP 1 Score: 377 bits (968), Expect = 8.85e-127
Identity = 173/187 (92.51%), Postives = 173/187 (92.51%), Query Frame = 0


Query: 1   MASDDVVTSERRTMEEEKFDWFSEWYPVMPVCDLDKKVPTGKKVLGLDLVVWWDRNENAW 60
           MASDDVVTSERR MEEEKFDWFSEWYPVMPVCDLDKKVPTGKKVLGLDLVVWWDRNENAW
Sbjct: 54  MASDDVVTSERRKMEEEKFDWFSEWYPVMPVCDLDKKVPTGKKVLGLDLVVWWDRNENAW 113

Query: 61  KVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPV------- 120
           KVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPV       
Sbjct: 114 KVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVELAVNRS 173

Query: 121 -----HSSKKACAAVYPSTMQNGIVWFWPNLDPKFKDIIMEKKPPFIPELDDPSYVKLEG 175
                HSSKKACAAVYPST QNGIVWFWPNLDPKFKDIIMEKKPPFIPELDDPSYVKLEG
Sbjct: 174 ALLSVHSSKKACAAVYPSTTQNGIVWFWPNLDPKFKDIIMEKKPPFIPELDDPSYVKLEG 233

[Close]

BLAST of IVF0016387 vs. TAIR 10
Match: AT4G25650.1 (ACD1-like )

HSP 1 Score: 307.4 bits (786), Expect = 7.6e-84
Identity = 124/159 (77.99%), Postives = 143/159 (89.94%), Query Frame = 0


Query: 17  EKFDWFSEWYPVMPVCDLDKKVPTGKKVLGLDLVVWWDRNENAWKVFDDSCPHRLAPLSE 76
           +KFDW++ WYPVMP+CDLDKKVP GKKV+G+DLVVWWDRNE  WKV DD+CPHRLAPLS+
Sbjct: 77  DKFDWYANWYPVMPICDLDKKVPHGKKVMGIDLVVWWDRNEKQWKVMDDTCPHRLAPLSD 136

Query: 77  GRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHSSKKACAAVYPSTMQNGIVWFW 136
           GRIDQWGRLQCVYHGWCFNGSGDCK IPQAPPDGPPVH+ K+AC AVYPST+Q+ I+WFW
Sbjct: 137 GRIDQWGRLQCVYHGWCFNGSGDCKLIPQAPPDGPPVHTFKQACVAVYPSTVQHEIIWFW 196

Query: 137 PNLDPKFKDIIMEKKPPFIPELDDPSYVKLEGNRDMAYG 176
           PN DPK+K+II   KPP+IPEL+DPS+ KL GNRD+ YG
Sbjct: 197 PNSDPKYKNIIETNKPPYIPELEDPSFTKLMGNRDIPYG 235

[Close]

BLAST of IVF0016387 vs. TAIR 10
Match: AT4G25650.2 (ACD1-like )

HSP 1 Score: 307.4 bits (786), Expect = 7.6e-84
Identity = 124/159 (77.99%), Postives = 143/159 (89.94%), Query Frame = 0


Query: 17  EKFDWFSEWYPVMPVCDLDKKVPTGKKVLGLDLVVWWDRNENAWKVFDDSCPHRLAPLSE 76
           +KFDW++ WYPVMP+CDLDKKVP GKKV+G+DLVVWWDRNE  WKV DD+CPHRLAPLS+
Sbjct: 77  DKFDWYANWYPVMPICDLDKKVPHGKKVMGIDLVVWWDRNEKQWKVMDDTCPHRLAPLSD 136

Query: 77  GRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHSSKKACAAVYPSTMQNGIVWFW 136
           GRIDQWGRLQCVYHGWCFNGSGDCK IPQAPPDGPPVH+ K+AC AVYPST+Q+ I+WFW
Sbjct: 137 GRIDQWGRLQCVYHGWCFNGSGDCKLIPQAPPDGPPVHTFKQACVAVYPSTVQHEIIWFW 196

Query: 137 PNLDPKFKDIIMEKKPPFIPELDDPSYVKLEGNRDMAYG 176
           PN DPK+K+II   KPP+IPEL+DPS+ KL GNRD+ YG
Sbjct: 197 PNSDPKYKNIIETNKPPYIPELEDPSFTKLMGNRDIPYG 235

[Close]

BLAST of IVF0016387 vs. TAIR 10
Match: AT3G44880.1 (Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain )

HSP 1 Score: 164.5 bits (415), Expect = 7.9e-41
Identity = 81/180 (45.00%), Postives = 104/180 (57.78%), Query Frame = 0


Query: 8   TSERRTMEE---------EKFDWFSEWYPVMPVCDLDKKVPTGKKVLGLDLVVWWDRNEN 67
           T E+R  EE          +F W   WYPV  V DLD  VPT  ++LG DLV+W+DRN+ 
Sbjct: 62  TEEKRIEEEYGGDKEEEGSEFKWRDHWYPVSLVEDLDPNVPTPFQLLGRDLVLWFDRNDQ 121

Query: 68  AWKVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHS--S 127
            W  FDD CPHRLAPLSEGR+D+ G LQC YHGW F G G C  IPQA   GP   +  S
Sbjct: 122 KWAAFDDLCPHRLAPLSEGRLDENGHLQCSYHGWSFGGCGSCTRIPQAATSGPEARAVKS 181

Query: 128 KKACAAVYPSTMQNGIVWFWPNLDPKFKDIIMEKKPPFIP-ELDDPSYVKLEGNRDMAYG 176
            +ACA  +P+ +  G+++ WP  D    D     +PP +P + D P +  +   RD+ YG
Sbjct: 182 PRACAIKFPTMVSQGLLFVWP--DENGWDRANSIEPPRLPDDFDKPEFSTVTIQRDLFYG 239

[Close]

BLAST of IVF0016387 vs. TAIR 10
Match: AT2G24820.1 (translocon at the inner envelope membrane of chloroplasts 55-II )

HSP 1 Score: 108.2 bits (269), Expect = 6.7e-24
Identity = 61/182 (33.52%), Postives = 87/182 (47.80%), Query Frame = 0


Query: 10  ERRTMEEEKFDWFSEWYPVMPVCDLDKKVPTGKKVLGLDLVVWWDRNENAWKVFDDSCPH 69
           E + +E   +DW  EWYP+    ++ +  P G  V    +V++ D  E   + ++D CPH
Sbjct: 73  EEKRVEVADYDWTEEWYPLYLTKNVPEDAPLGLTVYDRQIVLYKD-GEGTLRCYEDRCPH 132

Query: 70  RLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHSSKKACAAVYPSTMQ 129
           RLA LSEG++   GRL+C+YHGW F G G C  IPQ P         K AC   Y     
Sbjct: 133 RLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPAS---AKIPKAACVKTYEVKDS 192

Query: 130 NGIVWFW------PNLD----------PKFKDIIMEKKPPF-----IPELDDPSYVKLEG 171
            G+VW W      PN +          P F DI    + P+     +  L DP++V +  
Sbjct: 193 QGVVWVWMSTKTPPNPEKLPWFENFARPGFFDISTTHELPYDHSILLENLMDPAHVPISH 249

[Close]

BLAST of IVF0016387 vs. TAIR 10
Match: AT1G44446.1 (Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain )

HSP 1 Score: 68.9 bits (167), Expect = 4.5e-12
Identity = 42/148 (28.38%), Postives = 59/148 (39.86%), Query Frame = 0


Query: 25  WYPVMPVCDLDKKVPTGKKVLGLDLVVWWDRNENAWKVF----------DDSCPHRLAPL 84
           WYPV    DL             D +V  +  E  W +F           ++C HR  PL
Sbjct: 221 WYPVAFTADLKH-----------DTMVPIECFEQPWVIFRGEDGKPGCVRNTCAHRACPL 280

Query: 85  SEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHSSKKACAAVYPSTMQNGIVW 144
             G +++ GR+QC YHGW ++  G+CK +P             K      P   Q G++W
Sbjct: 281 DLGTVNE-GRIQCPYHGWEYSTDGECKKMPST--------KLLKVKIKSLPCLEQEGMIW 339

Query: 145 FWPNLDPKFKDIIMEKKPPFIPELDDPS 163
            WP  +P           P +P L  PS
Sbjct: 341 IWPGDEP---------PAPILPSLQPPS 339

The following BLAST results are available for this feature:

BLAST of IVF0016387 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8W496	1.1e-82	77.99	Protochlorophyllide-dependent translocon component 52, chloroplastic OS=Arabidop...	[more]
Q0DV66	2.3e-40	46.78	Pheophorbide a oxygenase, chloroplastic OS=Oryza sativa subsp. japonica OX=39947...	[more]
Q9FYC2	1.1e-39	45.00	Pheophorbide a oxygenase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAO P...	[more]
O49931	6.6e-24	34.46	Protein TIC 55, chloroplastic OS=Pisum sativum OX=3888 GN=TIC55 PE=1 SV=1	[more]
Q9SK50	9.5e-23	33.52	Protein TIC 55, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC55 PE=1 SV=1	[more]

BLAST of IVF0016387 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CD90	6.4e-107	100.00	Protochlorophyllide-dependent translocon component 52 OS=Cucumis melo var. makuw...	[more]
A0A1S3BRB5	6.4e-107	100.00	protochlorophyllide-dependent translocon component 52, chloroplastic-like OS=Cuc...	[more]
A0A0A0M2F3	3.2e-106	98.31	Rieske domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G600160 PE=4...	[more]
A0A5A7UN46	7.1e-106	98.86	Protochlorophyllide-dependent translocon component 52 OS=Cucumis melo var. makuw...	[more]
A0A0A0LX74	6.5e-99	91.38	Rieske domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G600180 PE=4...	[more]

BLAST of IVF0016387 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008451032.1	3.11e-132	100.00	PREDICTED: protochlorophyllide-dependent translocon component 52, chloroplastic-...	[more]
KGN66706.2	1.16e-131	98.86	hypothetical protein Csa_007259 [Cucumis sativus]	[more]
KAA0055706.1	3.10e-131	98.86	protochlorophyllide-dependent translocon component 52 [Cucumis melo var. makuwa]	[more]
XP_011660063.2	2.04e-130	98.86	protochlorophyllide-dependent translocon component 52, chloroplastic isoform X2 ...	[more]
XP_031741410.1	8.85e-127	92.51	protochlorophyllide-dependent translocon component 52, chloroplastic isoform X1 ...	[more]

BLAST of IVF0016387 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G25650.1	7.6e-84	77.99	ACD1-like	[more]
AT4G25650.2	7.6e-84	77.99	ACD1-like	[more]
AT3G44880.1	7.9e-41	45.00	Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain	[more]
AT2G24820.1	6.7e-24	33.52	translocon at the inner envelope membrane of chloroplasts 55-II	[more]
AT1G44446.1	4.5e-12	28.38	Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017941	Rieske [2Fe-2S] iron-sulphur domain	PFAM	PF00355	Rieske	coord: 24..108 e-value: 2.5E-19 score: 69.0
IPR017941	Rieske [2Fe-2S] iron-sulphur domain	PROSITE	PS51296	RIESKE	coord: 25..135 score: 27.129684
IPR036922	Rieske [2Fe-2S] iron-sulphur domain superfamily	GENE3D	2.102.10.10		coord: 20..157 e-value: 1.4E-37 score: 130.3
IPR036922	Rieske [2Fe-2S] iron-sulphur domain superfamily	SUPERFAMILY	50022	ISP domain	coord: 5..138
None	No IPR available	PANTHER	PTHR21266	IRON-SULFUR DOMAIN CONTAINING PROTEIN	coord: 9..165
None	No IPR available	PANTHER	PTHR21266:SF32	NEVERLAND	coord: 9..165
None	No IPR available	CDD	cd03480	Rieske_RO_Alpha_PaO	coord: 15..146 e-value: 3.9461E-79 score: 229.902

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0016387.2	IVF0016387.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0031967	organelle envelope
molecular_function	GO:0051537	2 iron, 2 sulfur cluster binding
molecular_function	GO:0010277	chlorophyllide a oxygenase [overall] activity
molecular_function	GO:0046872	metal ion binding