Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCCAAGAAAAAGGAGATCAAAGAACAAAGAAATTTGATTGTGGACATTGATGTACAAGATTATGGTATCGAGGATGAAGATGAAGGGAGTATTAGTGTAAATAACAGAGCAACATCAAGTGGCTCGAGCTTGAAGAAGCCAAGACAAAAGGGTCCAATGGATGCATTTTTTACTCCCAATCCAGAAACTGTGGTTCAAAATAGAAAGAATGACAAAGGAAAACAAACTTCGTTGAATGCGACGTACAAGAAGGAAATGAGGGAGCGCACCATCCAAAGAATTGCTCGATGGTTTTATGATGCAGGAGTGCCTTTGAATGCTTGCACATATAATAGTTTTGCCCCTATGATTGAGTCAATTGGGCAATTTGGTCCTGGATTGAAACCACCAACATATCATGAGTTGAGAGTTTCATGTTTGAAGAAAGAATTAGAAACAACAAATGAGTTGATGAGGAGCCATAAAGCAGAGTGGGCTAAGGTTTGA
mRNA sequence
ATGTCCAAGAAAAAGGAGATCAAAGAACAAAGAAATTTGATTGTGGACATTGATGTACAAGATTATGGTATCGAGGATGAAGATGAAGGGAGTATTAGTGTAAATAACAGAGCAACATCAAGTGGCTCGAGCTTGAAGAAGCCAAGACAAAAGGGTCCAATGGATGCATTTTTTACTCCCAATCCAGAAACTGTGGTTCAAAATAGAAAGAATGACAAAGGAAAACAAACTTCGTTGAATGCGACGTACAAGAAGGAAATGAGGGAGCGCACCATCCAAAGAATTGCTCGATGGTTTTATGATGCAGGAGTGCCTTTGAATGCTTGCACATATAATAGTTTTGCCCCTATGATTGAGTCAATTGGGCAATTTGGTCCTGGATTGAAACCACCAACATATCATGAGTTGAGAGTTTCATGTTTGAAGAAAGAATTAGAAACAACAAATGAGTTGATGAGGAGCCATAAAGCAGAGTGGGCTAAGGTTTGA
Coding sequence (CDS)
ATGTCCAAGAAAAAGGAGATCAAAGAACAAAGAAATTTGATTGTGGACATTGATGTACAAGATTATGGTATCGAGGATGAAGATGAAGGGAGTATTAGTGTAAATAACAGAGCAACATCAAGTGGCTCGAGCTTGAAGAAGCCAAGACAAAAGGGTCCAATGGATGCATTTTTTACTCCCAATCCAGAAACTGTGGTTCAAAATAGAAAGAATGACAAAGGAAAACAAACTTCGTTGAATGCGACGTACAAGAAGGAAATGAGGGAGCGCACCATCCAAAGAATTGCTCGATGGTTTTATGATGCAGGAGTGCCTTTGAATGCTTGCACATATAATAGTTTTGCCCCTATGATTGAGTCAATTGGGCAATTTGGTCCTGGATTGAAACCACCAACATATCATGAGTTGAGAGTTTCATGTTTGAAGAAAGAATTAGAAACAACAAATGAGTTGATGAGGAGCCATAAAGCAGAGTGGGCTAAGGTTTGA
Protein sequence
MSKKKEIKEQRNLIVDIDVQDYGIEDEDEGSISVNNRATSSGSSLKKPRQKGPMDAFFTPNPETVVQNRKNDKGKQTSLNATYKKEMRERTIQRIARWFYDAGVPLNACTYNSFAPMIESIGQFGPGLKPPTYHELRVSCLKKELETTNELMRSHKAEWAKV
Homology
BLAST of IVF0016374 vs. ExPASy TrEMBL
Match:
A0A5A7SSR3 (BED-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1327G00190 PE=4 SV=1)
HSP 1 Score: 325.5 bits (833), Expect = 1.3e-85
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0
Query: 1 MSKKKEIKEQRNLIVDIDVQDYGIEDEDEGSISVNNRATSSGSSLKKPRQKGPMDAFFTP 60
MSKKKEIKEQRNLIVDIDVQDYGIEDEDEGSISVNNRATSSGSSLKKPRQKGPMDAFFTP
Sbjct: 71 MSKKKEIKEQRNLIVDIDVQDYGIEDEDEGSISVNNRATSSGSSLKKPRQKGPMDAFFTP 130
Query: 61 NPETVVQNRKNDKGKQTSLNATYKKEMRERTIQRIARWFYDAGVPLNACTYNSFAPMIES 120
NPETVVQNRKNDKGKQTSLNATYKKEMRERTIQRIARWFYDAGVPLNACTYNSFAPMIES
Sbjct: 131 NPETVVQNRKNDKGKQTSLNATYKKEMRERTIQRIARWFYDAGVPLNACTYNSFAPMIES 190
Query: 121 IGQFGPGLKPPTYHELRVSCLKKELETTNELMRSHKAEWAK 162
IGQFGPGLKPPTYHELRVSCLKKELETTNELMRSHKAEWAK
Sbjct: 191 IGQFGPGLKPPTYHELRVSCLKKELETTNELMRSHKAEWAK 231
BLAST of IVF0016374 vs. ExPASy TrEMBL
Match:
A0A5A7TY62 (BED-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold61G001320 PE=4 SV=1)
HSP 1 Score: 312.4 bits (799), Expect = 1.1e-81
Identity = 154/162 (95.06%), Postives = 157/162 (96.91%), Query Frame = 0
Query: 1 MSKKKEIKEQRNLIVDIDVQDYGIEDEDEGSISVNNRATSSGSSLKKPRQKGPMDAFFTP 60
MSKKKEIKEQRNLIVDIDVQDYG+EDEDEGSISVNNRATSSGSSLKKPRQKGPMDAFFTP
Sbjct: 71 MSKKKEIKEQRNLIVDIDVQDYGMEDEDEGSISVNNRATSSGSSLKKPRQKGPMDAFFTP 130
Query: 61 NPETVVQNRKNDKGKQTSLNATYKKEMRERTIQRIARWFYDAGVPLNACTYNSFAPMIES 120
NPE+VVQNRKNDKGKQTSLNA YKKEMRE TIQRIARWFYDAGVPLNACTY+SFAPMIES
Sbjct: 131 NPESVVQNRKNDKGKQTSLNAAYKKEMREHTIQRIARWFYDAGVPLNACTYDSFAPMIES 190
Query: 121 IGQFGPGLKPPTYHELRVSCLKKELETTNELMRSHKAEWAKV 163
IGQFGPGLKPPTYHELRV CLKKELE TNELM SHKAEWAKV
Sbjct: 191 IGQFGPGLKPPTYHELRVPCLKKELEATNELMSSHKAEWAKV 232
BLAST of IVF0016374 vs. ExPASy TrEMBL
Match:
A0A5D3BV42 (BED-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold6571G00020 PE=4 SV=1)
HSP 1 Score: 312.4 bits (799), Expect = 1.1e-81
Identity = 154/162 (95.06%), Postives = 157/162 (96.91%), Query Frame = 0
Query: 1 MSKKKEIKEQRNLIVDIDVQDYGIEDEDEGSISVNNRATSSGSSLKKPRQKGPMDAFFTP 60
MSKKKEIKEQRNLIVDIDVQDYG+EDEDEGSISVNNRATSSGSSLKKPRQKGPMDAFFTP
Sbjct: 71 MSKKKEIKEQRNLIVDIDVQDYGMEDEDEGSISVNNRATSSGSSLKKPRQKGPMDAFFTP 130
Query: 61 NPETVVQNRKNDKGKQTSLNATYKKEMRERTIQRIARWFYDAGVPLNACTYNSFAPMIES 120
NPE+VVQNRKNDKGKQTSLNA YKKEMRE TIQRIARWFYDAGVPLNACTY+SFAPMIES
Sbjct: 131 NPESVVQNRKNDKGKQTSLNAAYKKEMREHTIQRIARWFYDAGVPLNACTYDSFAPMIES 190
Query: 121 IGQFGPGLKPPTYHELRVSCLKKELETTNELMRSHKAEWAKV 163
IGQFGPGLKPPTYHELRV CLKKELE TNELM SHKAEWAKV
Sbjct: 191 IGQFGPGLKPPTYHELRVPCLKKELEATNELMSSHKAEWAKV 232
BLAST of IVF0016374 vs. ExPASy TrEMBL
Match:
A0A5A7V8P5 (BED-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G004030 PE=4 SV=1)
HSP 1 Score: 312.4 bits (799), Expect = 1.1e-81
Identity = 154/162 (95.06%), Postives = 157/162 (96.91%), Query Frame = 0
Query: 1 MSKKKEIKEQRNLIVDIDVQDYGIEDEDEGSISVNNRATSSGSSLKKPRQKGPMDAFFTP 60
MSKKKEIKEQRNLIVDIDVQDYG+EDEDEGSISVNNRATSSGSSLKKPRQKGPMDAFFTP
Sbjct: 71 MSKKKEIKEQRNLIVDIDVQDYGMEDEDEGSISVNNRATSSGSSLKKPRQKGPMDAFFTP 130
Query: 61 NPETVVQNRKNDKGKQTSLNATYKKEMRERTIQRIARWFYDAGVPLNACTYNSFAPMIES 120
NPE+VVQNRKNDKGKQTSLNA YKKEMRE TIQRIARWFYDAGVPLNACTY+SFAPMIES
Sbjct: 131 NPESVVQNRKNDKGKQTSLNAAYKKEMREHTIQRIARWFYDAGVPLNACTYDSFAPMIES 190
Query: 121 IGQFGPGLKPPTYHELRVSCLKKELETTNELMRSHKAEWAKV 163
IGQFGPGLKPPTYHELRV CLKKELE TNELM SHKAEWAKV
Sbjct: 191 IGQFGPGLKPPTYHELRVPCLKKELEATNELMSSHKAEWAKV 232
BLAST of IVF0016374 vs. ExPASy TrEMBL
Match:
A0A5D3DR78 (BED-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1185G00050 PE=4 SV=1)
HSP 1 Score: 312.4 bits (799), Expect = 1.1e-81
Identity = 154/162 (95.06%), Postives = 157/162 (96.91%), Query Frame = 0
Query: 1 MSKKKEIKEQRNLIVDIDVQDYGIEDEDEGSISVNNRATSSGSSLKKPRQKGPMDAFFTP 60
MSKKKEIKEQRNLIVDIDVQDYG+EDEDEGSISVNNRATSSGSSLKKPRQKGPMDAFFTP
Sbjct: 71 MSKKKEIKEQRNLIVDIDVQDYGMEDEDEGSISVNNRATSSGSSLKKPRQKGPMDAFFTP 130
Query: 61 NPETVVQNRKNDKGKQTSLNATYKKEMRERTIQRIARWFYDAGVPLNACTYNSFAPMIES 120
NPE+VVQNRKNDKGKQTSLNA YKKEMRE TIQRIARWFYDAGVPLNACTY+SFAPMIES
Sbjct: 131 NPESVVQNRKNDKGKQTSLNAAYKKEMREHTIQRIARWFYDAGVPLNACTYDSFAPMIES 190
Query: 121 IGQFGPGLKPPTYHELRVSCLKKELETTNELMRSHKAEWAKV 163
IGQFGPGLKPPTYHELRV CLKKELE TNELM SHKAEWAKV
Sbjct: 191 IGQFGPGLKPPTYHELRVPCLKKELEATNELMSSHKAEWAKV 232
BLAST of IVF0016374 vs. NCBI nr
Match:
KAA0032269.1 (uncharacterized protein E6C27_scaffold219G001030 [Cucumis melo var. makuwa] >TYK17073.1 uncharacterized protein E5676_scaffold1327G00190 [Cucumis melo var. makuwa])
HSP 1 Score: 323 bits (828), Expect = 8.28e-109
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0
Query: 1 MSKKKEIKEQRNLIVDIDVQDYGIEDEDEGSISVNNRATSSGSSLKKPRQKGPMDAFFTP 60
MSKKKEIKEQRNLIVDIDVQDYGIEDEDEGSISVNNRATSSGSSLKKPRQKGPMDAFFTP
Sbjct: 71 MSKKKEIKEQRNLIVDIDVQDYGIEDEDEGSISVNNRATSSGSSLKKPRQKGPMDAFFTP 130
Query: 61 NPETVVQNRKNDKGKQTSLNATYKKEMRERTIQRIARWFYDAGVPLNACTYNSFAPMIES 120
NPETVVQNRKNDKGKQTSLNATYKKEMRERTIQRIARWFYDAGVPLNACTYNSFAPMIES
Sbjct: 131 NPETVVQNRKNDKGKQTSLNATYKKEMRERTIQRIARWFYDAGVPLNACTYNSFAPMIES 190
Query: 121 IGQFGPGLKPPTYHELRVSCLKKELETTNELMRSHKAEWAK 161
IGQFGPGLKPPTYHELRVSCLKKELETTNELMRSHKAEWAK
Sbjct: 191 IGQFGPGLKPPTYHELRVSCLKKELETTNELMRSHKAEWAK 231
BLAST of IVF0016374 vs. NCBI nr
Match:
KAA0053508.1 (uncharacterized protein E6C27_scaffold190G00650 [Cucumis melo var. makuwa])
HSP 1 Score: 303 bits (775), Expect = 2.67e-101
Identity = 151/162 (93.21%), Postives = 155/162 (95.68%), Query Frame = 0
Query: 1 MSKKKEIKEQRNLIVDIDVQDYGIEDEDEGSISVNNRATSSGSSLKKPRQKGPMDAFFTP 60
MSKKKEIKEQRNLIVDIDVQDYG+EDEDEGSISVNNRATSSGSSLKKPRQKGPMDAFFT
Sbjct: 71 MSKKKEIKEQRNLIVDIDVQDYGMEDEDEGSISVNNRATSSGSSLKKPRQKGPMDAFFTL 130
Query: 61 NPETVVQNRKNDKGKQTSLNATYKKEMRERTIQRIARWFYDAGVPLNACTYNSFAPMIES 120
NPE+VVQNRKNDKGKQTSLNA YKKEMRE TIQRIARWFYDAGVPLNACTY+ FAP+IES
Sbjct: 131 NPESVVQNRKNDKGKQTSLNAAYKKEMREHTIQRIARWFYDAGVPLNACTYDIFAPLIES 190
Query: 121 IGQFGPGLKPPTYHELRVSCLKKELETTNELMRSHKAEWAKV 162
IGQFGPGLKPPTYHELRV CLKKELE TNELM SHKAEWAKV
Sbjct: 191 IGQFGPGLKPPTYHELRVPCLKKELEATNELMSSHKAEWAKV 232
BLAST of IVF0016374 vs. NCBI nr
Match:
KAA0066645.1 (uncharacterized protein E6C27_scaffold979G00720 [Cucumis melo var. makuwa])
HSP 1 Score: 310 bits (793), Expect = 3.73e-100
Identity = 154/162 (95.06%), Postives = 156/162 (96.30%), Query Frame = 0
Query: 1 MSKKKEIKEQRNLIVDIDVQDYGIEDEDEGSISVNNRATSSGSSLKKPRQKGPMDAFFTP 60
MSKKKEIKEQRNLIVDIDVQDYG+EDEDEGSISVNNRATSSGSSLKKPRQKGPMDAFFTP
Sbjct: 1 MSKKKEIKEQRNLIVDIDVQDYGMEDEDEGSISVNNRATSSGSSLKKPRQKGPMDAFFTP 60
Query: 61 NPETVVQNRKNDKGKQTSLNATYKKEMRERTIQRIARWFYDAGVPLNACTYNSFAPMIES 120
NPETVVQNRKNDKGKQTSLNA YK EMRE TIQRIARWFYDAGVPLNACTY+SFAPMIES
Sbjct: 61 NPETVVQNRKNDKGKQTSLNAAYKNEMREHTIQRIARWFYDAGVPLNACTYDSFAPMIES 120
Query: 121 IGQFGPGLKPPTYHELRVSCLKKELETTNELMRSHKAEWAKV 162
IGQFGPGLKPPTYHELRV CLKKELE TNELMRSHKAEW KV
Sbjct: 121 IGQFGPGLKPPTYHELRVPCLKKELEATNELMRSHKAEWDKV 162
BLAST of IVF0016374 vs. NCBI nr
Match:
TYK03327.1 (hypothetical protein E5676_scaffold6571G00020 [Cucumis melo var. makuwa])
HSP 1 Score: 310 bits (794), Expect = 1.49e-99
Identity = 154/162 (95.06%), Postives = 157/162 (96.91%), Query Frame = 0
Query: 1 MSKKKEIKEQRNLIVDIDVQDYGIEDEDEGSISVNNRATSSGSSLKKPRQKGPMDAFFTP 60
MSKKKEIKEQRNLIVDIDVQDYG+EDEDEGSISVNNRATSSGSSLKKPRQKGPMDAFFTP
Sbjct: 71 MSKKKEIKEQRNLIVDIDVQDYGMEDEDEGSISVNNRATSSGSSLKKPRQKGPMDAFFTP 130
Query: 61 NPETVVQNRKNDKGKQTSLNATYKKEMRERTIQRIARWFYDAGVPLNACTYNSFAPMIES 120
NPE+VVQNRKNDKGKQTSLNA YKKEMRE TIQRIARWFYDAGVPLNACTY+SFAPMIES
Sbjct: 131 NPESVVQNRKNDKGKQTSLNAAYKKEMREHTIQRIARWFYDAGVPLNACTYDSFAPMIES 190
Query: 121 IGQFGPGLKPPTYHELRVSCLKKELETTNELMRSHKAEWAKV 162
IGQFGPGLKPPTYHELRV CLKKELE TNELM SHKAEWAKV
Sbjct: 191 IGQFGPGLKPPTYHELRVPCLKKELEATNELMSSHKAEWAKV 232
BLAST of IVF0016374 vs. NCBI nr
Match:
KAA0047882.1 (hypothetical protein E6C27_scaffold133G001550 [Cucumis melo var. makuwa])
HSP 1 Score: 310 bits (794), Expect = 2.67e-99
Identity = 154/162 (95.06%), Postives = 157/162 (96.91%), Query Frame = 0
Query: 1 MSKKKEIKEQRNLIVDIDVQDYGIEDEDEGSISVNNRATSSGSSLKKPRQKGPMDAFFTP 60
MSKKKEIKEQRNLIVDIDVQDYG+EDEDEGSISVNNRATSSGSSLKKPRQKGPMDAFFTP
Sbjct: 71 MSKKKEIKEQRNLIVDIDVQDYGMEDEDEGSISVNNRATSSGSSLKKPRQKGPMDAFFTP 130
Query: 61 NPETVVQNRKNDKGKQTSLNATYKKEMRERTIQRIARWFYDAGVPLNACTYNSFAPMIES 120
NPE+VVQNRKNDKGKQTSLNA YKKEMRE TIQRIARWFYDAGVPLNACTY+SFAPMIES
Sbjct: 131 NPESVVQNRKNDKGKQTSLNAAYKKEMREHTIQRIARWFYDAGVPLNACTYDSFAPMIES 190
Query: 121 IGQFGPGLKPPTYHELRVSCLKKELETTNELMRSHKAEWAKV 162
IGQFGPGLKPPTYHELRV CLKKELE TNELM SHKAEWAKV
Sbjct: 191 IGQFGPGLKPPTYHELRVPCLKKELEATNELMSSHKAEWAKV 232
BLAST of IVF0016374 vs. TAIR 10
Match:
AT1G43260.1 (hAT transposon superfamily protein )
HSP 1 Score: 65.5 bits (158), Expect = 4.6e-11
Identity = 28/67 (41.79%), Postives = 39/67 (58.21%), Query Frame = 0
Query: 93 QRIARWFYDAGVPLNACTYNSFAPMIESIGQFGPGLKPPTYHELRVSCLKKELETTNELM 152
Q +ARW Y G+P NA + M+E GQFGPG+ PP+ ++LR LK+E+ LM
Sbjct: 37 QYVARWVYSHGIPFNAIANDDLRRMLEVAGQFGPGVTPPSQYQLREPLLKEEVVRMKGLM 96
Query: 153 RSHKAEW 160
+ EW
Sbjct: 97 EEQEDEW 103
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7SSR3 | 1.3e-85 | 100.00 | BED-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E56... | [more] |
A0A5A7TY62 | 1.1e-81 | 95.06 | BED-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C... | [more] |
A0A5D3BV42 | 1.1e-81 | 95.06 | BED-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E56... | [more] |
A0A5A7V8P5 | 1.1e-81 | 95.06 | BED-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C... | [more] |
A0A5D3DR78 | 1.1e-81 | 95.06 | BED-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E56... | [more] |
Match Name | E-value | Identity | Description | |
KAA0032269.1 | 8.28e-109 | 100.00 | uncharacterized protein E6C27_scaffold219G001030 [Cucumis melo var. makuwa] >TYK... | [more] |
KAA0053508.1 | 2.67e-101 | 93.21 | uncharacterized protein E6C27_scaffold190G00650 [Cucumis melo var. makuwa] | [more] |
KAA0066645.1 | 3.73e-100 | 95.06 | uncharacterized protein E6C27_scaffold979G00720 [Cucumis melo var. makuwa] | [more] |
TYK03327.1 | 1.49e-99 | 95.06 | hypothetical protein E5676_scaffold6571G00020 [Cucumis melo var. makuwa] | [more] |
KAA0047882.1 | 2.67e-99 | 95.06 | hypothetical protein E6C27_scaffold133G001550 [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |
AT1G43260.1 | 4.6e-11 | 41.79 | hAT transposon superfamily protein | [more] |