IVF0016300 (gene) Melon (IVF77) v1

Overview


Name	IVF0016300
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Unknown protein
Location	chr04: 20512733 .. 20512906 (+)
RNA-Seq Expression	IVF0016300
Synteny	IVF0016300

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAGAAATTGTAGCAAAAAAAAGAAAAAAAAAAAGAAAGACGGAGGAAAGAAATCGCAGCAGAAAAAAAAGGAAAAGAAGAAAGACGATGAAAAAAATCGCAGGAGGAAGATGACGAAAGAAATCGCGAGGAAGAGAAGAAAAATGGAAGAACAAACCTGGAATATTTAA

mRNA sequence

ATGGAAAGAAATTGTAGCAAAAAAAAGAAAAAAAAAAAGAAAGACGGAGGAAAGAAATCGCAGCAGAAAAAAAAGGAAAAGAAGAAAGACGATGAAAAAAATCGCAGGAGGAAGATGACGAAAGAAATCGCGAGGAAGAGAAGAAAAATGGAAGAACAAACCTGGAATATTTAA

Coding sequence (CDS)

ATGGAAAGAAATTGTAGCAAAAAAAAGAAAAAAAAAAAGAAAGACGGAGGAAAGAAATCGCAGCAGAAAAAAAAGGAAAAGAAGAAAGACGATGAAAAAAATCGCAGGAGGAAGATGACGAAAGAAATCGCGAGGAAGAGAAGAAAAATGGAAGAACAAACCTGGAATATTTAA

Protein sequence

MERNCSKKKKKKKKDGGKKSQQKKKEKKKDDEKNRRRKMTKEIARKRRKMEEQTWNI

Homology

The following BLAST results are available for this feature:

BLAST of IVF0016300 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0016300 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0016300 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0016300 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 22..49
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..57
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..38
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0016300.1	IVF0016300.1	mRNA