IVF0016246 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCGGTTTCTTTGGAAGCTTTGGCAATGGCTGGGATTGATTCCAATGAGTGGGGTATGGACGCTCAAGAATGGGAAAGAAACGAGATCGACGTTGTTCCACCACATTTATTAGCCGATGAAGAAGATGACGAGGATGGTGAATATGTAACGAGTACTATTAGTAACTATTGCTTTCGCGTTGATGGGTCCTTCGGGGGATGGCGTCGGAGAGATTGGAAAGCTGATGGTGCCCTTCGCATTTTGGGGATTTTTTATAGTCTAAGCAAAGTCATAGAGAAAAGGGCTTCTAATGGGATGAATTCAGTGAGAATAATAGTTAGAACTATTTTAGGGTTTTTGATGGTGATGACCATGAAGATAATTAGTGCACAAAGATCCAAGATGTAG ATGTCGGTTTCTTTGGAAGCTTTGGCAATGGCTGGGATTGATTCCAATGAGTGGGGTATGGACGCTCAAGAATGGGAAAGAAACGAGATCGACGTTGTTCCACCACATTTATTAGCCGATGAAGAAGATGACGAGGATGGTGAATATGTAACGAGTACTATTAGTAACTATTGCTTTCGCGTTGATGGGTCCTTCGGGGGATGGCGTCGGAGAGATTGGAAAGCTGATGGTGCCCTTCGCATTTTGGGGATTTTTTATAGTCTAAGCAAAGTCATAGAGAAAAGGGCTTCTAATGGGATGAATTCAGTGAGAATAATAGTTAGAACTATTTTAGGGTTTTTGATGGTGATGACCATGAAGATAATTAGTGCACAAAGATCCAAGATGTAG ATGTCGGTTTCTTTGGAAGCTTTGGCAATGGCTGGGATTGATTCCAATGAGTGGGGTATGGACGCTCAAGAATGGGAAAGAAACGAGATCGACGTTGTTCCACCACATTTATTAGCCGATGAAGAAGATGACGAGGATGGTGAATATGTAACGAGTACTATTAGTAACTATTGCTTTCGCGTTGATGGGTCCTTCGGGGGATGGCGTCGGAGAGATTGGAAAGCTGATGGTGCCCTTCGCATTTTGGGGATTTTTTATAGTCTAAGCAAAGTCATAGAGAAAAGGGCTTCTAATGGGATGAATTCAGTGAGAATAATAGTTAGAACTATTTTAGGGTTTTTGATGGTGATGACCATGAAGATAATTAGTGCACAAAGATCCAAGATGTAG MSVSLEALAMAGIDSNEWGMDAQEWERNEIDVVPPHLLADEEDDEDGEYVTSTISNYCFRVDGSFGGWRRRDWKADGALRILGIFYSLSKVIEKRASNGMNSVRIIVRTILGFLMVMTMKIISAQRSKM Homology
BLAST of IVF0016246 vs. ExPASy TrEMBL
Match: A0A5D3CZU0 (Tetratricopeptide-like helical OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G00110 PE=4 SV=1) HSP 1 Score: 257.7 bits (657), Expect = 2.6e-65 Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 0
BLAST of IVF0016246 vs. ExPASy TrEMBL
Match: A0A5A7TS68 (Tetratricopeptide-like helical OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G004640 PE=4 SV=1) HSP 1 Score: 236.9 bits (603), Expect = 4.8e-59 Identity = 117/118 (99.15%), Postives = 117/118 (99.15%), Query Frame = 0
BLAST of IVF0016246 vs. ExPASy TrEMBL
Match: A0A0A0KWE7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G026810 PE=4 SV=1) HSP 1 Score: 212.6 bits (540), Expect = 9.6e-52 Identity = 115/133 (86.47%), Postives = 118/133 (88.72%), Query Frame = 0
BLAST of IVF0016246 vs. ExPASy TrEMBL
Match: A0A6J1FX98 (uncharacterized protein LOC111447880 OS=Cucurbita moschata OX=3662 GN=LOC111447880 PE=4 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 3.0e-21 Identity = 65/129 (50.39%), Postives = 85/129 (65.89%), Query Frame = 0
BLAST of IVF0016246 vs. ExPASy TrEMBL
Match: A0A1Q3CWR7 (Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_28116 PE=4 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 2.0e-09 Identity = 33/59 (55.93%), Postives = 45/59 (76.27%), Query Frame = 0
BLAST of IVF0016246 vs. NCBI nr
Match: TYK16880.1 (Tetratricopeptide-like helical [Cucumis melo var. makuwa]) HSP 1 Score: 254 bits (650), Expect = 2.66e-85 Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 0
BLAST of IVF0016246 vs. NCBI nr
Match: KAA0044707.1 (Tetratricopeptide-like helical [Cucumis melo var. makuwa]) HSP 1 Score: 233 bits (595), Expect = 5.17e-77 Identity = 117/118 (99.15%), Postives = 117/118 (99.15%), Query Frame = 0
BLAST of IVF0016246 vs. NCBI nr
Match: KAG7015383.1 (hypothetical protein SDJN02_23018, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 153 bits (387), Expect = 3.40e-45 Identity = 89/130 (68.46%), Postives = 98/130 (75.38%), Query Frame = 0
BLAST of IVF0016246 vs. NCBI nr
Match: KAG6577295.1 (hypothetical protein SDJN03_24869, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 152 bits (385), Expect = 6.85e-45 Identity = 89/130 (68.46%), Postives = 98/130 (75.38%), Query Frame = 0
BLAST of IVF0016246 vs. NCBI nr
Match: XP_022943015.1 (uncharacterized protein LOC111447880 [Cucurbita moschata]) HSP 1 Score: 108 bits (270), Expect = 1.49e-27 Identity = 65/129 (50.39%), Postives = 85/129 (65.89%), Query Frame = 0
BLAST of IVF0016246 vs. TAIR 10
Match: AT2G22320.1 (unknown protein; Has 7 Blast hits to 7 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 51.2 bits (121), Expect = 7.1e-07 Identity = 25/44 (56.82%), Postives = 32/44 (72.73%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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