IVF0016216 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAACATACAAGGAACAGACAGTGCGGCTCCGAGGAAAGGACAACAACACCAATGGACAACTCCTACTTACTCATGTCGAGTGGAAAGCAAGACAAAAACTGAATAATGGTGACAACTTTTCGGTGAACAATGGGCACAGATCCTATGGTAGCGATCACGAAAGATGGCAAGGACAAAGACGAGGTCGTAGTCATGGTCGTGGCGTAGAGCATCAAAACAGTATGGGAGGCACTAGAAACACTAGAAAAGGCACTCGTGATAAAAGTCACATAAAGTGCTTCACTTGCAACAAGATGGGACATTACACGTCGAAGTGTCATGGAAAAATTCATGACGACGAAGCTCATCTAACTTGCACCGTCGAAGAAGAACGAACTTTGATGATGGTCGTCTTCTAG ATGAAAACATACAAGGAACAGACAGTGCGGCTCCGAGGAAAGGACAACAACACCAATGGACAACTCCTACTTACTCATGTCGAGTGGAAAGCAAGACAAAAACTGAATAATGGTGACAACTTTTCGGTGAACAATGGGCACAGATCCTATGGTAGCGATCACGAAAGATGGCAAGGACAAAGACGAGGTCGTAGTCATGGTCGTGGCGTAGAGCATCAAAACAGTATGGGAGGCACTAGAAACACTAGAAAAGGCACTCGTGATAAAAGTCACATAAAGTGCTTCACTTGCAACAAGATGGGACATTACACGTCGAAGTGTCATGGAAAAATTCATGACGACGAAGCTCATCTAACTTGCACCGTCGAAGAAGAACGAACTTTGATGATGGTCGTCTTCTAG ATGAAAACATACAAGGAACAGACAGTGCGGCTCCGAGGAAAGGACAACAACACCAATGGACAACTCCTACTTACTCATGTCGAGTGGAAAGCAAGACAAAAACTGAATAATGGTGACAACTTTTCGGTGAACAATGGGCACAGATCCTATGGTAGCGATCACGAAAGATGGCAAGGACAAAGACGAGGTCGTAGTCATGGTCGTGGCGTAGAGCATCAAAACAGTATGGGAGGCACTAGAAACACTAGAAAAGGCACTCGTGATAAAAGTCACATAAAGTGCTTCACTTGCAACAAGATGGGACATTACACGTCGAAGTGTCATGGAAAAATTCATGACGACGAAGCTCATCTAACTTGCACCGTCGAAGAAGAACGAACTTTGATGATGGTCGTCTTCTAG MKTYKEQTVRLRGKDNNTNGQLLLTHVEWKARQKLNNGDNFSVNNGHRSYGSDHERWQGQRRGRSHGRGVEHQNSMGGTRNTRKGTRDKSHIKCFTCNKMGHYTSKCHGKIHDDEAHLTCTVEEERTLMMVVF Homology
BLAST of IVF0016216 vs. ExPASy TrEMBL
Match: A0A5A7TDE3 (Keratin, type I cytoskeletal 10-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold767G00400 PE=4 SV=1) HSP 1 Score: 277.7 bits (709), Expect = 2.5e-71 Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0
BLAST of IVF0016216 vs. ExPASy TrEMBL
Match: A0A5D3B747 (Keratin, type I cytoskeletal 9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold104G001040 PE=4 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 3.6e-25 Identity = 58/84 (69.05%), Postives = 69/84 (82.14%), Query Frame = 0
BLAST of IVF0016216 vs. ExPASy TrEMBL
Match: A0A5A7SIJ0 (Keratin, type I cytoskeletal 9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold68G00200 PE=4 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 8.2e-14 Identity = 49/84 (58.33%), Postives = 55/84 (65.48%), Query Frame = 0
BLAST of IVF0016216 vs. ExPASy TrEMBL
Match: C6JSM1 (CCHC-type domain-containing protein OS=Sorghum bicolor OX=4558 GN=Sb1475s002010 PE=4 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 5.3e-13 Identity = 55/134 (41.04%), Postives = 76/134 (56.72%), Query Frame = 0
BLAST of IVF0016216 vs. ExPASy TrEMBL
Match: A0A5K0VFR7 (Uncharacterized protein (Fragment) OS=Nymphaea colorata OX=210225 GN=NYM_LOCUS1129 PE=4 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 5.9e-12 Identity = 55/138 (39.86%), Postives = 75/138 (54.35%), Query Frame = 0
BLAST of IVF0016216 vs. NCBI nr
Match: KAA0039661.1 (keratin, type I cytoskeletal 10-like [Cucumis melo var. makuwa] >TYJ95545.1 keratin, type I cytoskeletal 10-like [Cucumis melo var. makuwa]) HSP 1 Score: 277 bits (708), Expect = 5.10e-94 Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0
BLAST of IVF0016216 vs. NCBI nr
Match: XP_038889342.1 (uncharacterized protein LOC120079255 [Benincasa hispida]) HSP 1 Score: 173 bits (439), Expect = 7.33e-52 Identity = 86/132 (65.15%), Postives = 97/132 (73.48%), Query Frame = 0
BLAST of IVF0016216 vs. NCBI nr
Match: XP_031745069.1 (uncharacterized protein LOC116405247 [Cucumis sativus]) HSP 1 Score: 166 bits (421), Expect = 3.18e-49 Identity = 84/132 (63.64%), Postives = 97/132 (73.48%), Query Frame = 0
BLAST of IVF0016216 vs. NCBI nr
Match: XP_031741744.1 (uncharacterized protein LOC116403940 [Cucumis sativus]) HSP 1 Score: 167 bits (423), Expect = 1.97e-48 Identity = 86/132 (65.15%), Postives = 98/132 (74.24%), Query Frame = 0
BLAST of IVF0016216 vs. NCBI nr
Match: XP_031745073.1 (uncharacterized protein LOC116405251 [Cucumis sativus]) HSP 1 Score: 168 bits (425), Expect = 1.68e-47 Identity = 85/132 (64.39%), Postives = 98/132 (74.24%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|