IVF0016212 (gene) Melon (IVF77) v1

Overview


Name	IVF0016212
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	protein SLOW GREEN 1, chloroplastic-like
Location	chr08: 28516589 .. 28517970 (-)
RNA-Seq Expression	IVF0016212
Synteny	IVF0016212

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGTAATATCGCTCCTTCTCGTCTCTTCGCACAGCTGCTCGAAGGTAAACAGCCATGGAGTCTCTTCCCTCACTTCACCACCGTCGTTTTTCTTCTCACCAACTCCTTTCCTTCAGCCACCGTCTCTCTTCCTTCTCTAAACCCATTTCTTCTCTCTCCTTCCGCTCTCCGCCGCCGTCTCGCCTCCGTTCGTCTGTCAGGTCCTTGCGTGTTAAAGCCTCATCCTCTTCATCGACCTCCGACGATACCACCTCTCCTAACGGCGGCCTTCTATCGGGATTTCTCAAAACCGCTTGTATCTCCGTTGCCGTTGCTGCATTCTTCTTTCATCGCTTCGACTATCGACGCTTTGTTGCTGTTGCTGTCCAGGTGGCGCCGGAGACGACGGAGTCTACTGATGAATCGACGGAATATGAGGAAAATGAGAGCGTTGTAGAAGAGAAACGGGCTGATGATTCGAATGATGTCGAAGCTCTTCGATCTCTCGTTGAGGAGAGTGTGAAATCAGGTAAACTCCCAGAAGCAGTTGAAGCCCTAAACCGTTTGATTGAACTTGAACCCAATGACGTTGAGTTGCCTATGTTAAGGGCTAATTTCCATAGCTATATGGGGGAGCTTGAATTGGCGAAAAATGAATTTGAGGAGATTTTAGCGAAAGACCCACTTCGCGTTGAGGCTTATCATGGACTTGCAATGGTGGCGGAGCAACTGAATGATAATTCATTGAAGGACGTTACTAAAAGGATCGAAGAAGCAATGGAGAAATGCAAGAACCAGAAGGACAAGTCAGATATAAGGGATTTCAAGCTCTTGGTCGCGCAAATTAAGGTAATGGAAGGGAGTTATCTTGATGCGTTGAAAGCTTATCAAGAACTTGTGAGGGAGGAGCCAAGGGATTTTAGGCCATATCTATGTCAGGGGATCATATATACTCTGTTAAGGAAGAGTGAGGAAGCTGAGAAACATTTTGAGAAATTTAGGAGACTTGTTCCAAAGAACCATCCTTACAAAGAGTACCTTGATGATAACATGTATGCGACAAAGTTTTTTGCTCAGAAAGTAGAAAAGGAGGGAGCTGGTTCGAAGAGATGAGATGAGTTCACACCCTGCTGCTTCTGTATGAGTTATCTCCTCACTTTTCACTGCTGTTCTAGAATAGAGTCATTTTGTTAGTCTTTAGTAGTTTGGGATTCATTAGGGTGGTGTTATATATCTGAATTTTGCCTGAAGTTTTATGTTTGTCTGAATCTTTCAATTGAGTCTCCTATGGAGAATACTGATTATACTTATCTCTAGCATTCCTGAAAGTCTCACAGAAGCCGTGTTCCTTTCACTTGTTCAAACAAGTATTTTTTCTATAAACATGAAGATTGTTGAAGCTG

mRNA sequence

TTGTAATATCGCTCCTTCTCGTCTCTTCGCACAGCTGCTCGAAGGTAAACAGCCATGGAGTCTCTTCCCTCACTTCACCACCGTCGTTTTTCTTCTCACCAACTCCTTTCCTTCAGCCACCGTCTCTCTTCCTTCTCTAAACCCATTTCTTCTCTCTCCTTCCGCTCTCCGCCGCCGTCTCGCCTCCGTTCGTCTGTCAGGTCCTTGCGTGTTAAAGCCTCATCCTCTTCATCGACCTCCGACGATACCACCTCTCCTAACGGCGGCCTTCTATCGGGATTTCTCAAAACCGCTTGTATCTCCGTTGCCGTTGCTGCATTCTTCTTTCATCGCTTCGACTATCGACGCTTTGTTGCTGTTGCTGTCCAGGTGGCGCCGGAGACGACGGAGTCTACTGATGAATCGACGGAATATGAGGAAAATGAGAGCGTTGTAGAAGAGAAACGGGCTGATGATTCGAATGATGTCGAAGCTCTTCGATCTCTCGTTGAGGAGAGTGTGAAATCAGGTAAACTCCCAGAAGCAGTTGAAGCCCTAAACCGTTTGATTGAACTTGAACCCAATGACGTTGAGTTGCCTATGTTAAGGGCTAATTTCCATAGCTATATGGGGGAGCTTGAATTGGCGAAAAATGAATTTGAGGAGATTTTAGCGAAAGACCCACTTCGCGTTGAGGCTTATCATGGACTTGCAATGGTGGCGGAGCAACTGAATGATAATTCATTGAAGGACGTTACTAAAAGGATCGAAGAAGCAATGGAGAAATGCAAGAACCAGAAGGACAAGTCAGATATAAGGGATTTCAAGCTCTTGGTCGCGCAAATTAAGGTAATGGAAGGGAGTTATCTTGATGCGTTGAAAGCTTATCAAGAACTTGTGAGGGAGGAGCCAAGGGATTTTAGGCCATATCTATGTCAGGGGATCATATATACTCTGTTAAGGAAGAGTGAGGAAGCTGAGAAACATTTTGAGAAATTTAGGAGACTTGTTCCAAAGAACCATCCTTACAAAGAGTACCTTGATGATAACATGTATGCGACAAAGTTTTTTGCTCAGAAAGTAGAAAAGGAGGGAGCTGGTTCGAAGAGATGAGATGAGTTCACACCCTGCTGCTTCTGTATGAGTTATCTCCTCACTTTTCACTGCTGTTCTAGAATAGAGTCATTTTGTTAGTCTTTAGTAGTTTGGGATTCATTAGGGTGGTGTTATATATCTGAATTTTGCCTGAAGTTTTATGTTTGTCTGAATCTTTCAATTGAGTCTCCTATGGAGAATACTGATTATACTTATCTCTAGCATTCCTGAAAGTCTCACAGAAGCCGTGTTCCTTTCACTTGTTCAAACAAGTATTTTTTCTATAAACATGAAGATTGTTGAAGCTG

Coding sequence (CDS)

ATGGAGTCTCTTCCCTCACTTCACCACCGTCGTTTTTCTTCTCACCAACTCCTTTCCTTCAGCCACCGTCTCTCTTCCTTCTCTAAACCCATTTCTTCTCTCTCCTTCCGCTCTCCGCCGCCGTCTCGCCTCCGTTCGTCTGTCAGGTCCTTGCGTGTTAAAGCCTCATCCTCTTCATCGACCTCCGACGATACCACCTCTCCTAACGGCGGCCTTCTATCGGGATTTCTCAAAACCGCTTGTATCTCCGTTGCCGTTGCTGCATTCTTCTTTCATCGCTTCGACTATCGACGCTTTGTTGCTGTTGCTGTCCAGGTGGCGCCGGAGACGACGGAGTCTACTGATGAATCGACGGAATATGAGGAAAATGAGAGCGTTGTAGAAGAGAAACGGGCTGATGATTCGAATGATGTCGAAGCTCTTCGATCTCTCGTTGAGGAGAGTGTGAAATCAGGTAAACTCCCAGAAGCAGTTGAAGCCCTAAACCGTTTGATTGAACTTGAACCCAATGACGTTGAGTTGCCTATGTTAAGGGCTAATTTCCATAGCTATATGGGGGAGCTTGAATTGGCGAAAAATGAATTTGAGGAGATTTTAGCGAAAGACCCACTTCGCGTTGAGGCTTATCATGGACTTGCAATGGTGGCGGAGCAACTGAATGATAATTCATTGAAGGACGTTACTAAAAGGATCGAAGAAGCAATGGAGAAATGCAAGAACCAGAAGGACAAGTCAGATATAAGGGATTTCAAGCTCTTGGTCGCGCAAATTAAGGTAATGGAAGGGAGTTATCTTGATGCGTTGAAAGCTTATCAAGAACTTGTGAGGGAGGAGCCAAGGGATTTTAGGCCATATCTATGTCAGGGGATCATATATACTCTGTTAAGGAAGAGTGAGGAAGCTGAGAAACATTTTGAGAAATTTAGGAGACTTGTTCCAAAGAACCATCCTTACAAAGAGTACCTTGATGATAACATGTATGCGACAAAGTTTTTTGCTCAGAAAGTAGAAAAGGAGGGAGCTGGTTCGAAGAGATGA

Protein sequence

MESLPSLHHRRFSSHQLLSFSHRLSSFSKPISSLSFRSPPPSRLRSSVRSLRVKASSSSSTSDDTTSPNGGLLSGFLKTACISVAVAAFFFHRFDYRRFVAVAVQVAPETTESTDESTEYEENESVVEEKRADDSNDVEALRSLVEESVKSGKLPEAVEALNRLIELEPNDVELPMLRANFHSYMGELELAKNEFEEILAKDPLRVEAYHGLAMVAEQLNDNSLKDVTKRIEEAMEKCKNQKDKSDIRDFKLLVAQIKVMEGSYLDALKAYQELVREEPRDFRPYLCQGIIYTLLRKSEEAEKHFEKFRRLVPKNHPYKEYLDDNMYATKFFAQKVEKEGAGSKR

Homology

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BLAST of IVF0016212 vs. ExPASy Swiss-Prot
Match: Q9LS48 (protein SLOW GREEN 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SG1 PE=1 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 4.3e-27
Identity = 100/320 (31.25%), Postives = 170/320 (53.12%), Query Frame = 0


Query: 24  LSSFSKPISS-LSFRSPP---PSRLRSSVRSLRVKASSSSSTSDDTTSPNGGLLSGFLKT 83
           LS+ S  +SS ++ ++ P   P   R  + S+R++ASS+ ++S             F K+
Sbjct: 5   LSASSSLVSSFVAVKATPVTGPLIPRRDLLSIRIRASSNQNSSGYCFPEK---FKSFAKS 64

Query: 84  ACISVAVAAFFFHRFDYRRFVAVAVQVAPETTESTDESTEYEENESVVEEKRADDSND-- 143
           A I +  A     +F     + V  +    T E T E  + E+   +       DS    
Sbjct: 65  A-ILIGAAVSMTGKFS---TLPVKAESPVTTIEKTYEEVKEEKLSEITPLSELLDSTPEA 124

Query: 144 VEALRSLVEESVKSGKLPEAVEALNRLIELEPNDVELPMLRANFHSYMGELELAKNEFEE 203
           VE LRSL+++ ++ G+  EA++ L RL+  +P + E   L A     MG  E A+  FEE
Sbjct: 125 VETLRSLLQQKLEKGEDEEALKLLERLVAAQPEETEWKFLMARLLGEMGRPENARQMFEE 184

Query: 204 ILAKDPLRVEAYHGLAMVAEQLNDNSLKDVTKRIEEAMEKCKNQKDKSDIRDFKLLVAQI 263
           IL ++PL  EA    A++ ++  + +   V +R+E+A+   + +    + RD +L++AQI
Sbjct: 185 ILQRNPLSFEALFENALLMDRSGEGNA--VLQRLEDALAVAEAEYLVKEARDVRLIIAQI 244

Query: 264 KVMEGSYLDALKAYQELVREEPRDFRPYLCQGIIYTLLRKSEEAEKHFEKFRRLVPKNHP 323
             ++ +  +ALK+Y++L +E+P+DFRPY C+G+IY+LL K+ EA++ F K+R L PK   
Sbjct: 245 HFLQKNVDEALKSYEQLTKEDPKDFRPYFCRGMIYSLLDKNVEAKEQFAKYRELSPKKFE 304

Query: 324 YKEYLDDNMYATKFFAQKVE 338
            + YL   +   K F    E
Sbjct: 305 VEGYLRTPLSKMKLFGGSEE 315

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BLAST of IVF0016212 vs. ExPASy Swiss-Prot
Match: Q54M21 (DnaJ homolog subfamily C member 3 homolog OS=Dictyostelium discoideum OX=44689 GN=dnajc3 PE=3 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 3.9e-04
Identity = 40/180 (22.22%), Postives = 77/180 (42.78%), Query Frame = 0


Query: 150 KSGKLPEAVEALNRLIELEPNDVELPMLRANFHSYMGELELAKNEFEEILAKDPLRVEAY 209
           + GK   A+  LNR IE  P+++   + RA   S +G  E A +E++ +L   P   +A 
Sbjct: 81  QKGKNILALSDLNRAIEANPDNIHARLKRAKIQSSLGRFEEAMDEYKRVLKIRPDNSQAK 140

Query: 210 HGLAMVAEQLNDNSLKDVTKRIEEAMEKC---KNQKDK-----------SDIRDFKLLVA 269
             +           LK V +++E+  +     KN KD            SD+++ +L++ 
Sbjct: 141 QQI---------EKLKKVEQQLEKVRDMVKVEKNYKDSIAILLDIQSVVSDLKEVRLMLC 200

Query: 270 QIKVMEGSYLDALKAYQELVREEPRDFRPYLCQGIIYTLLRKSEEAEKHFEKFRRLVPKN 316
           +    +G +   L     +++ EP        +G  +  + + E A K  ++  +  P N
Sbjct: 201 ECFFQQGDHRKVLDETMTILKSEPSSVAALYWRGKTFFSMGEKEIAMKFLKEGLKFDPDN 251

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BLAST of IVF0016212 vs. ExPASy TrEMBL
Match: A0A5A7TWQ7 (Protein SLOW GREEN 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold908G001590 PE=4 SV=1)

HSP 1 Score: 650.2 bits (1676), Expect = 4.8e-183
Identity = 345/345 (100.00%), Postives = 345/345 (100.00%), Query Frame = 0


Query: 1   MESLPSLHHRRFSSHQLLSFSHRLSSFSKPISSLSFRSPPPSRLRSSVRSLRVKASSSSS 60
           MESLPSLHHRRFSSHQLLSFSHRLSSFSKPISSLSFRSPPPSRLRSSVRSLRVKASSSSS
Sbjct: 1   MESLPSLHHRRFSSHQLLSFSHRLSSFSKPISSLSFRSPPPSRLRSSVRSLRVKASSSSS 60

Query: 61  TSDDTTSPNGGLLSGFLKTACISVAVAAFFFHRFDYRRFVAVAVQVAPETTESTDESTEY 120
           TSDDTTSPNGGLLSGFLKTACISVAVAAFFFHRFDYRRFVAVAVQVAPETTESTDESTEY
Sbjct: 61  TSDDTTSPNGGLLSGFLKTACISVAVAAFFFHRFDYRRFVAVAVQVAPETTESTDESTEY 120

Query: 121 EENESVVEEKRADDSNDVEALRSLVEESVKSGKLPEAVEALNRLIELEPNDVELPMLRAN 180
           EENESVVEEKRADDSNDVEALRSLVEESVKSGKLPEAVEALNRLIELEPNDVELPMLRAN
Sbjct: 121 EENESVVEEKRADDSNDVEALRSLVEESVKSGKLPEAVEALNRLIELEPNDVELPMLRAN 180

Query: 181 FHSYMGELELAKNEFEEILAKDPLRVEAYHGLAMVAEQLNDNSLKDVTKRIEEAMEKCKN 240
           FHSYMGELELAKNEFEEILAKDPLRVEAYHGLAMVAEQLNDNSLKDVTKRIEEAMEKCKN
Sbjct: 181 FHSYMGELELAKNEFEEILAKDPLRVEAYHGLAMVAEQLNDNSLKDVTKRIEEAMEKCKN 240

Query: 241 QKDKSDIRDFKLLVAQIKVMEGSYLDALKAYQELVREEPRDFRPYLCQGIIYTLLRKSEE 300
           QKDKSDIRDFKLLVAQIKVMEGSYLDALKAYQELVREEPRDFRPYLCQGIIYTLLRKSEE
Sbjct: 241 QKDKSDIRDFKLLVAQIKVMEGSYLDALKAYQELVREEPRDFRPYLCQGIIYTLLRKSEE 300

Query: 301 AEKHFEKFRRLVPKNHPYKEYLDDNMYATKFFAQKVEKEGAGSKR 346
           AEKHFEKFRRLVPKNHPYKEYLDDNMYATKFFAQKVEKEGAGSKR
Sbjct: 301 AEKHFEKFRRLVPKNHPYKEYLDDNMYATKFFAQKVEKEGAGSKR 345

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BLAST of IVF0016212 vs. ExPASy TrEMBL
Match: A0A1S3BI52 (protein SLOW GREEN 1, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103489908 PE=4 SV=1)

HSP 1 Score: 650.2 bits (1676), Expect = 4.8e-183
Identity = 345/345 (100.00%), Postives = 345/345 (100.00%), Query Frame = 0


Query: 1   MESLPSLHHRRFSSHQLLSFSHRLSSFSKPISSLSFRSPPPSRLRSSVRSLRVKASSSSS 60
           MESLPSLHHRRFSSHQLLSFSHRLSSFSKPISSLSFRSPPPSRLRSSVRSLRVKASSSSS
Sbjct: 1   MESLPSLHHRRFSSHQLLSFSHRLSSFSKPISSLSFRSPPPSRLRSSVRSLRVKASSSSS 60

Query: 61  TSDDTTSPNGGLLSGFLKTACISVAVAAFFFHRFDYRRFVAVAVQVAPETTESTDESTEY 120
           TSDDTTSPNGGLLSGFLKTACISVAVAAFFFHRFDYRRFVAVAVQVAPETTESTDESTEY
Sbjct: 61  TSDDTTSPNGGLLSGFLKTACISVAVAAFFFHRFDYRRFVAVAVQVAPETTESTDESTEY 120

Query: 121 EENESVVEEKRADDSNDVEALRSLVEESVKSGKLPEAVEALNRLIELEPNDVELPMLRAN 180
           EENESVVEEKRADDSNDVEALRSLVEESVKSGKLPEAVEALNRLIELEPNDVELPMLRAN
Sbjct: 121 EENESVVEEKRADDSNDVEALRSLVEESVKSGKLPEAVEALNRLIELEPNDVELPMLRAN 180

Query: 181 FHSYMGELELAKNEFEEILAKDPLRVEAYHGLAMVAEQLNDNSLKDVTKRIEEAMEKCKN 240
           FHSYMGELELAKNEFEEILAKDPLRVEAYHGLAMVAEQLNDNSLKDVTKRIEEAMEKCKN
Sbjct: 181 FHSYMGELELAKNEFEEILAKDPLRVEAYHGLAMVAEQLNDNSLKDVTKRIEEAMEKCKN 240

Query: 241 QKDKSDIRDFKLLVAQIKVMEGSYLDALKAYQELVREEPRDFRPYLCQGIIYTLLRKSEE 300
           QKDKSDIRDFKLLVAQIKVMEGSYLDALKAYQELVREEPRDFRPYLCQGIIYTLLRKSEE
Sbjct: 241 QKDKSDIRDFKLLVAQIKVMEGSYLDALKAYQELVREEPRDFRPYLCQGIIYTLLRKSEE 300

Query: 301 AEKHFEKFRRLVPKNHPYKEYLDDNMYATKFFAQKVEKEGAGSKR 346
           AEKHFEKFRRLVPKNHPYKEYLDDNMYATKFFAQKVEKEGAGSKR
Sbjct: 301 AEKHFEKFRRLVPKNHPYKEYLDDNMYATKFFAQKVEKEGAGSKR 345

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BLAST of IVF0016212 vs. ExPASy TrEMBL
Match: A0A0A0KXE2 (TPR_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G293280 PE=4 SV=1)

HSP 1 Score: 567.8 bits (1462), Expect = 3.2e-158
Identity = 304/345 (88.12%), Postives = 323/345 (93.62%), Query Frame = 0


Query: 1   MESLPSLHHRRFSSHQLLSFSHRLSSFSKPISSLSFRSPPPSRLRSSVRSLRVKASSSSS 60
           MESLP+LHHR + SHQLLSF+HR  S SKPISSLSFRS PPSRLRSSVRSLRVKASSSSS
Sbjct: 1   MESLPTLHHRSYPSHQLLSFTHRFPSLSKPISSLSFRSLPPSRLRSSVRSLRVKASSSSS 60

Query: 61  TSDDTTSPNGGLLSGFLKTACISVAVAAFFFHRFDYRRFVAVAVQVAPETTESTDESTEY 120
           TSDDT+  N GLLSGFLKTACIS AVAAFFF RFD+RR VAVAVQVAPETTESTDESTEY
Sbjct: 61  TSDDTSPLNVGLLSGFLKTACISAAVAAFFFLRFDHRRAVAVAVQVAPETTESTDESTEY 120

Query: 121 EENESVVEEKRADDSNDVEALRSLVEESVKSGKLPEAVEALNRLIELEPNDVELPMLRAN 180
           EENESVVEEKRADDSNDVEALRSLVEE+VKSGKLPEA+EALNRLIELEPND ELP+L+AN
Sbjct: 121 EENESVVEEKRADDSNDVEALRSLVEENVKSGKLPEAIEALNRLIELEPNDPELPLLKAN 180

Query: 181 FHSYMGELELAKNEFEEILAKDPLRVEAYHGLAMVAEQLNDNSLKDVTKRIEEAMEKCKN 240
           F+SYMGELELAKNEFE+ILA+DP  VEAYHGLA VAEQLNDNSLKDV KRIEEAM+KCKN
Sbjct: 181 FYSYMGELELAKNEFEDILARDPFVVEAYHGLATVAEQLNDNSLKDVAKRIEEAMKKCKN 240

Query: 241 QKDKSDIRDFKLLVAQIKVMEGSYLDALKAYQELVREEPRDFRPYLCQGIIYTLLRKSEE 300
           QKDKSDIRDFKLLVAQIKVMEGSY +ALKAY+ELVREEPRDFRPYLCQGIIYTLL KSEE
Sbjct: 241 QKDKSDIRDFKLLVAQIKVMEGSYHEALKAYKELVREEPRDFRPYLCQGIIYTLLSKSEE 300

Query: 301 AEKHFEKFRRLVPKNHPYKEYLDDNMYATKFFAQKVEKEGAGSKR 346
           AEK+FEKFRRLVPKNHPYKEYLD+NM+ATK  AQK+EKE AGSKR
Sbjct: 301 AEKYFEKFRRLVPKNHPYKEYLDENMFATKLIAQKLEKERAGSKR 345

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BLAST of IVF0016212 vs. ExPASy TrEMBL
Match: A0A6J1HFV1 (protein SLOW GREEN 1, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111463182 PE=4 SV=1)

HSP 1 Score: 500.0 bits (1286), Expect = 8.1e-138
Identity = 273/355 (76.90%), Postives = 301/355 (84.79%), Query Frame = 0


Query: 1   MESLPSLHHRRFSSHQLLSFSHRLSSFSKPISSLSFRSPPPSRLRS--SVRSLRVKASSS 60
           ME L + HHR   S Q LSFS RL SFS P SSL F SPPPSRLRS  S RSL VKASSS
Sbjct: 1   MEGLATFHHRPLPSQQHLSFSRRLPSFSYPSSSLFFLSPPPSRLRSPLSFRSLSVKASSS 60

Query: 61  SSTSDDTT---------SPNGGLLSGFLKTACISVAVAAFFFHRFDYRRFVAVAVQVAPE 120
            STSD+T+         + N GLLSGFL+TACISVA AAFFF RFD+RR V VA  VAPE
Sbjct: 61  PSTSDETSRNAKPSISETTNDGLLSGFLRTACISVAAAAFFFLRFDHRRAVVVAAPVAPE 120

Query: 121 TTESTDESTEYEENESVVEEKRADDSNDVEALRSLVEESVKSGKLPEAVEALNRLIELEP 180
            TES +ES  YEENESVVEE+  D+SNDVEALRSLVEE+VKSGKLPEA+EALNRLIE+EP
Sbjct: 121 MTESIEESNPYEENESVVEEQPMDNSNDVEALRSLVEENVKSGKLPEAIEALNRLIEIEP 180

Query: 181 NDVELPMLRANFHSYMGELELAKNEFEEILAKDPLRVEAYHGLAMVAEQLNDNSLKDVTK 240
           N++ELP+LRANFHSYMGELELAK+EFEEIL +DPLRVEAYHGLA+V+EQLNDNSLK V K
Sbjct: 181 NELELPLLRANFHSYMGELELAKSEFEEILMEDPLRVEAYHGLALVSEQLNDNSLKGVAK 240

Query: 241 RIEEAMEKCKNQKDKSDIRDFKLLVAQIKVMEGSYLDALKAYQELVREEPRDFRPYLCQG 300
           RIE+AMEKCK Q  KSDIRDFKLL+AQIKVMEGSY DALKAYQELVREEPRDFRPYLCQG
Sbjct: 241 RIEQAMEKCKKQNKKSDIRDFKLLIAQIKVMEGSYFDALKAYQELVREEPRDFRPYLCQG 300

Query: 301 IIYTLLRKSEEAEKHFEKFRRLVPKNHPYKEYLDDNMYATKFFAQKVEKEGAGSK 345
           IIY+LLRK+EEAEK FEKFRRLVPKNHPY+EY D+N++ATK F QK+EKEGAG K
Sbjct: 301 IIYSLLRKNEEAEKQFEKFRRLVPKNHPYREYFDENVFATKLFGQKLEKEGAGLK 355

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BLAST of IVF0016212 vs. ExPASy TrEMBL
Match: A0A6J1IQW2 (protein SLOW GREEN 1, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111477618 PE=4 SV=1)

HSP 1 Score: 498.8 bits (1283), Expect = 1.8e-137
Identity = 273/354 (77.12%), Postives = 299/354 (84.46%), Query Frame = 0


Query: 1   MESLPSLHHRRFSSHQLLSFSHRLSSFSKPISSLSFRSPPPSRLRSSVRSLRVKASSSSS 60
           MESLP++HHR   S QLLSFSHRL SF KPISSLSF   PP+RLRSS RSL VKASSS S
Sbjct: 1   MESLPTVHHRHHPSQQLLSFSHRLPSFPKPISSLSFAHTPPTRLRSSFRSLSVKASSSQS 60

Query: 61  TSDD---------TTSPNGGLLSGFLKTACISV-AVAAFFFHRFDYRRFVAVAVQVAPET 120
           TSD+         + + NGGLLSGFLKTACISV A AAF+F RFD+RR VAVAV VAP T
Sbjct: 61  TSDEPSRNAKSSISETTNGGLLSGFLKTACISVAAAAAFYFLRFDHRRVVAVAVPVAPVT 120

Query: 121 TESTDESTEYEENESVVEEKRADDSNDVEALRSLVEESVKSGKLPEAVEALNRLIELEPN 180
           TESTDEST +EENESVVEEK  DD    E LRSLVEE+VKSGKLPEA+E L+RLIE+EPN
Sbjct: 121 TESTDESTVHEENESVVEEKPTDDLRGAETLRSLVEENVKSGKLPEAIETLSRLIEIEPN 180

Query: 181 DVELPMLRANFHSYMGELELAKNEFEEILAKDPLRVEAYHGLAMVAEQLNDNSLKDVTKR 240
           D ELP+LRAN  SY G+LELAKNEFEEIL +DP RVEAYHGL MV+EQLNDNSLKDVTKR
Sbjct: 181 DRELPLLRANIRSYAGQLELAKNEFEEILREDPFRVEAYHGLVMVSEQLNDNSLKDVTKR 240

Query: 241 IEEAMEKCKNQKDKSDIRDFKLLVAQIKVMEGSYLDALKAYQELVREEPRDFRPYLCQGI 300
           IEEAMEKCK Q DKS IRDFKLL+AQIKVM+GSY DALKAY ELVREEP+DFRPYLC+GI
Sbjct: 241 IEEAMEKCKKQNDKSVIRDFKLLLAQIKVMKGSYFDALKAYDELVREEPKDFRPYLCRGI 300

Query: 301 IYTLLRKSEEAEKHFEKFRRLVPKNHPYKEYLDDNMYATKFFAQKVEKEGAGSK 345
           IYTLLRK++EAEK FEKFRRLVPKNHPYKEY D+NM+ATK FAQK+EKE AG K
Sbjct: 301 IYTLLRKNKEAEKQFEKFRRLVPKNHPYKEYFDENMFATKLFAQKLEKEKAGLK 354

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BLAST of IVF0016212 vs. NCBI nr
Match: XP_008447473.1 (PREDICTED: protein SLOW GREEN 1, chloroplastic-like [Cucumis melo] >KAA0047338.1 protein SLOW GREEN 1 [Cucumis melo var. makuwa])

HSP 1 Score: 651 bits (1679), Expect = 5.41e-235
Identity = 345/345 (100.00%), Postives = 345/345 (100.00%), Query Frame = 0


Query: 1   MESLPSLHHRRFSSHQLLSFSHRLSSFSKPISSLSFRSPPPSRLRSSVRSLRVKASSSSS 60
           MESLPSLHHRRFSSHQLLSFSHRLSSFSKPISSLSFRSPPPSRLRSSVRSLRVKASSSSS
Sbjct: 1   MESLPSLHHRRFSSHQLLSFSHRLSSFSKPISSLSFRSPPPSRLRSSVRSLRVKASSSSS 60

Query: 61  TSDDTTSPNGGLLSGFLKTACISVAVAAFFFHRFDYRRFVAVAVQVAPETTESTDESTEY 120
           TSDDTTSPNGGLLSGFLKTACISVAVAAFFFHRFDYRRFVAVAVQVAPETTESTDESTEY
Sbjct: 61  TSDDTTSPNGGLLSGFLKTACISVAVAAFFFHRFDYRRFVAVAVQVAPETTESTDESTEY 120

Query: 121 EENESVVEEKRADDSNDVEALRSLVEESVKSGKLPEAVEALNRLIELEPNDVELPMLRAN 180
           EENESVVEEKRADDSNDVEALRSLVEESVKSGKLPEAVEALNRLIELEPNDVELPMLRAN
Sbjct: 121 EENESVVEEKRADDSNDVEALRSLVEESVKSGKLPEAVEALNRLIELEPNDVELPMLRAN 180

Query: 181 FHSYMGELELAKNEFEEILAKDPLRVEAYHGLAMVAEQLNDNSLKDVTKRIEEAMEKCKN 240
           FHSYMGELELAKNEFEEILAKDPLRVEAYHGLAMVAEQLNDNSLKDVTKRIEEAMEKCKN
Sbjct: 181 FHSYMGELELAKNEFEEILAKDPLRVEAYHGLAMVAEQLNDNSLKDVTKRIEEAMEKCKN 240

Query: 241 QKDKSDIRDFKLLVAQIKVMEGSYLDALKAYQELVREEPRDFRPYLCQGIIYTLLRKSEE 300
           QKDKSDIRDFKLLVAQIKVMEGSYLDALKAYQELVREEPRDFRPYLCQGIIYTLLRKSEE
Sbjct: 241 QKDKSDIRDFKLLVAQIKVMEGSYLDALKAYQELVREEPRDFRPYLCQGIIYTLLRKSEE 300

Query: 301 AEKHFEKFRRLVPKNHPYKEYLDDNMYATKFFAQKVEKEGAGSKR 345
           AEKHFEKFRRLVPKNHPYKEYLDDNMYATKFFAQKVEKEGAGSKR
Sbjct: 301 AEKHFEKFRRLVPKNHPYKEYLDDNMYATKFFAQKVEKEGAGSKR 345

[Close]

BLAST of IVF0016212 vs. NCBI nr
Match: XP_011653615.1 (protein SLOW GREEN 1, chloroplastic [Cucumis sativus] >KGN54218.1 hypothetical protein Csa_018088 [Cucumis sativus])

HSP 1 Score: 568 bits (1465), Expect = 2.18e-202
Identity = 304/345 (88.12%), Postives = 323/345 (93.62%), Query Frame = 0


Query: 1   MESLPSLHHRRFSSHQLLSFSHRLSSFSKPISSLSFRSPPPSRLRSSVRSLRVKASSSSS 60
           MESLP+LHHR + SHQLLSF+HR  S SKPISSLSFRS PPSRLRSSVRSLRVKASSSSS
Sbjct: 1   MESLPTLHHRSYPSHQLLSFTHRFPSLSKPISSLSFRSLPPSRLRSSVRSLRVKASSSSS 60

Query: 61  TSDDTTSPNGGLLSGFLKTACISVAVAAFFFHRFDYRRFVAVAVQVAPETTESTDESTEY 120
           TSDDT+  N GLLSGFLKTACIS AVAAFFF RFD+RR VAVAVQVAPETTESTDESTEY
Sbjct: 61  TSDDTSPLNVGLLSGFLKTACISAAVAAFFFLRFDHRRAVAVAVQVAPETTESTDESTEY 120

Query: 121 EENESVVEEKRADDSNDVEALRSLVEESVKSGKLPEAVEALNRLIELEPNDVELPMLRAN 180
           EENESVVEEKRADDSNDVEALRSLVEE+VKSGKLPEA+EALNRLIELEPND ELP+L+AN
Sbjct: 121 EENESVVEEKRADDSNDVEALRSLVEENVKSGKLPEAIEALNRLIELEPNDPELPLLKAN 180

Query: 181 FHSYMGELELAKNEFEEILAKDPLRVEAYHGLAMVAEQLNDNSLKDVTKRIEEAMEKCKN 240
           F+SYMGELELAKNEFE+ILA+DP  VEAYHGLA VAEQLNDNSLKDV KRIEEAM+KCKN
Sbjct: 181 FYSYMGELELAKNEFEDILARDPFVVEAYHGLATVAEQLNDNSLKDVAKRIEEAMKKCKN 240

Query: 241 QKDKSDIRDFKLLVAQIKVMEGSYLDALKAYQELVREEPRDFRPYLCQGIIYTLLRKSEE 300
           QKDKSDIRDFKLLVAQIKVMEGSY +ALKAY+ELVREEPRDFRPYLCQGIIYTLL KSEE
Sbjct: 241 QKDKSDIRDFKLLVAQIKVMEGSYHEALKAYKELVREEPRDFRPYLCQGIIYTLLSKSEE 300

Query: 301 AEKHFEKFRRLVPKNHPYKEYLDDNMYATKFFAQKVEKEGAGSKR 345
           AEK+FEKFRRLVPKNHPYKEYLD+NM+ATK  AQK+EKE AGSKR
Sbjct: 301 AEKYFEKFRRLVPKNHPYKEYLDENMFATKLIAQKLEKERAGSKR 345

[Close]

BLAST of IVF0016212 vs. NCBI nr
Match: XP_038883735.1 (protein SLOW GREEN 1, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 561 bits (1445), Expect = 3.36e-199
Identity = 305/353 (86.40%), Postives = 316/353 (89.52%), Query Frame = 0


Query: 1   MESLPSLHHRRFSSHQLLSFSHRLSSFSKPISSLSFRSPPPSRLRSSVRSLRVKASSSSS 60
           MESLP+LHHRR  SHQLLS SHRL SFSKPISSLSFRSPPPS LRSS RSL VKASSSSS
Sbjct: 1   MESLPTLHHRRHPSHQLLSSSHRLPSFSKPISSLSFRSPPPSPLRSSFRSLSVKASSSSS 60

Query: 61  TSDDTT---------SPNGGLLSGFLKTACISVAVAAFFFHRFDYRRFVAVAVQVAPETT 120
           TSD+T          + N GLLSGFLKTACISVA AAFFF RFD+RR VAVAV VAPETT
Sbjct: 61  TSDETLRNDKSSISETTNCGLLSGFLKTACISVAAAAFFFLRFDHRRAVAVAVPVAPETT 120

Query: 121 ESTDESTEYEENESVVEEKRADDSNDVEALRSLVEESVKSGKLPEAVEALNRLIELEPND 180
           ESTDEST YEENESVVEEK  DD NDVEALRSLVEE VKSGKLPEAVEALNRLIELEPND
Sbjct: 121 ESTDESTAYEENESVVEEKPTDDLNDVEALRSLVEEKVKSGKLPEAVEALNRLIELEPND 180

Query: 181 VELPMLRANFHSYMGELELAKNEFEEILAKDPLRVEAYHGLAMVAEQLNDNSLKDVTKRI 240
           +ELP+LRANFHSYMGELELAKNEFEEILA+DP RVEAYHGLAMVAEQLNDNSLKDV KRI
Sbjct: 181 LELPLLRANFHSYMGELELAKNEFEEILAEDPFRVEAYHGLAMVAEQLNDNSLKDVAKRI 240

Query: 241 EEAMEKCKNQKDKSDIRDFKLLVAQIKVMEGSYLDALKAYQELVREEPRDFRPYLCQGII 300
           EEAMEKCK Q DKSDIRDFKLLVAQIKVMEGSY DALKAYQELVREEPRDFRPYLCQGII
Sbjct: 241 EEAMEKCKKQNDKSDIRDFKLLVAQIKVMEGSYFDALKAYQELVREEPRDFRPYLCQGII 300

Query: 301 YTLLRKSEEAEKHFEKFRRLVPKNHPYKEYLDDNMYATKFFAQKVEKEGAGSK 344
           YTLLRK+EEAEK FEKFRRLVPKNHPYKEY D+NM+ATK FAQK+EKEGAG K
Sbjct: 301 YTLLRKNEEAEKQFEKFRRLVPKNHPYKEYFDENMFATKLFAQKLEKEGAGLK 353

[Close]

BLAST of IVF0016212 vs. NCBI nr
Match: XP_023545038.1 (protein SLOW GREEN 1, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 501 bits (1290), Expect = 1.37e-175
Identity = 274/354 (77.40%), Postives = 300/354 (84.75%), Query Frame = 0


Query: 1   MESLPSLHHRRFSSHQLLSFSHRLSSFSKPISSLSFRSPPPSRLRSSVRSLRVKASSSSS 60
           MESLP++HHR   S QLLSFSHRL SF KPISSLSF   PP+RLRSS RSL VKASSS S
Sbjct: 1   MESLPTVHHRHHPSQQLLSFSHRLPSFPKPISSLSFAHTPPTRLRSSFRSLSVKASSSQS 60

Query: 61  TSDDTT---------SPNGGLLSGFLKTACISVAVAA-FFFHRFDYRRFVAVAVQVAPET 120
           TSD+ +         + N GLLSGFLKTACISVA AA F+F RFD+RR VAVAV VAPET
Sbjct: 61  TSDEPSRNSKSSISETTNSGLLSGFLKTACISVAAAAAFYFLRFDHRRVVAVAVPVAPET 120

Query: 121 TESTDESTEYEENESVVEEKRADDSNDVEALRSLVEESVKSGKLPEAVEALNRLIELEPN 180
            ESTDEST +EENESVVEEK  DDS+  E LRSLVEE+VKSGKLPEA+E L+RLIELEPN
Sbjct: 121 MESTDESTAHEENESVVEEKPTDDSSGAETLRSLVEENVKSGKLPEAIETLSRLIELEPN 180

Query: 181 DVELPMLRANFHSYMGELELAKNEFEEILAKDPLRVEAYHGLAMVAEQLNDNSLKDVTKR 240
           D ELP+LRAN  SY G+LELA+NEFEEIL +DP RVEAYHGL MV+EQLNDNSLKDVTKR
Sbjct: 181 DRELPLLRANVRSYAGQLELARNEFEEILREDPFRVEAYHGLVMVSEQLNDNSLKDVTKR 240

Query: 241 IEEAMEKCKNQKDKSDIRDFKLLVAQIKVMEGSYLDALKAYQELVREEPRDFRPYLCQGI 300
           IEEAMEKCK Q DKS IRDFKLL+AQIKVM+GSY DALKAY ELVREEP+DFRPYLCQGI
Sbjct: 241 IEEAMEKCKKQNDKSIIRDFKLLLAQIKVMKGSYFDALKAYDELVREEPKDFRPYLCQGI 300

Query: 301 IYTLLRKSEEAEKHFEKFRRLVPKNHPYKEYLDDNMYATKFFAQKVEKEGAGSK 344
           IYTLLRK++EAEK FEKFRRLVPKNHPYKEY D+NM+ATK FAQK+EKE AG K
Sbjct: 301 IYTLLRKNKEAEKQFEKFRRLVPKNHPYKEYFDENMFATKLFAQKLEKEKAGLK 354

[Close]

BLAST of IVF0016212 vs. NCBI nr
Match: XP_022962798.1 (protein SLOW GREEN 1, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 500 bits (1288), Expect = 2.85e-175
Identity = 273/355 (76.90%), Postives = 301/355 (84.79%), Query Frame = 0


Query: 1   MESLPSLHHRRFSSHQLLSFSHRLSSFSKPISSLSFRSPPPSRLRS--SVRSLRVKASSS 60
           ME L + HHR   S Q LSFS RL SFS P SSL F SPPPSRLRS  S RSL VKASSS
Sbjct: 1   MEGLATFHHRPLPSQQHLSFSRRLPSFSYPSSSLFFLSPPPSRLRSPLSFRSLSVKASSS 60

Query: 61  SSTSDDTT---------SPNGGLLSGFLKTACISVAVAAFFFHRFDYRRFVAVAVQVAPE 120
            STSD+T+         + N GLLSGFL+TACISVA AAFFF RFD+RR V VA  VAPE
Sbjct: 61  PSTSDETSRNAKPSISETTNDGLLSGFLRTACISVAAAAFFFLRFDHRRAVVVAAPVAPE 120

Query: 121 TTESTDESTEYEENESVVEEKRADDSNDVEALRSLVEESVKSGKLPEAVEALNRLIELEP 180
            TES +ES  YEENESVVEE+  D+SNDVEALRSLVEE+VKSGKLPEA+EALNRLIE+EP
Sbjct: 121 MTESIEESNPYEENESVVEEQPMDNSNDVEALRSLVEENVKSGKLPEAIEALNRLIEIEP 180

Query: 181 NDVELPMLRANFHSYMGELELAKNEFEEILAKDPLRVEAYHGLAMVAEQLNDNSLKDVTK 240
           N++ELP+LRANFHSYMGELELAK+EFEEIL +DPLRVEAYHGLA+V+EQLNDNSLK V K
Sbjct: 181 NELELPLLRANFHSYMGELELAKSEFEEILMEDPLRVEAYHGLALVSEQLNDNSLKGVAK 240

Query: 241 RIEEAMEKCKNQKDKSDIRDFKLLVAQIKVMEGSYLDALKAYQELVREEPRDFRPYLCQG 300
           RIE+AMEKCK Q  KSDIRDFKLL+AQIKVMEGSY DALKAYQELVREEPRDFRPYLCQG
Sbjct: 241 RIEQAMEKCKKQNKKSDIRDFKLLIAQIKVMEGSYFDALKAYQELVREEPRDFRPYLCQG 300

Query: 301 IIYTLLRKSEEAEKHFEKFRRLVPKNHPYKEYLDDNMYATKFFAQKVEKEGAGSK 344
           IIY+LLRK+EEAEK FEKFRRLVPKNHPY+EY D+N++ATK F QK+EKEGAG K
Sbjct: 301 IIYSLLRKNEEAEKQFEKFRRLVPKNHPYREYFDENVFATKLFGQKLEKEGAGLK 355

[Close]

BLAST of IVF0016212 vs. TAIR 10
Match: AT2G37400.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 302.0 bits (772), Expect = 6.2e-82
Identity = 186/346 (53.76%), Postives = 232/346 (67.05%), Query Frame = 0


Query: 1   MESLPSLHHRRFSSHQLLSFSHRLSSFSKPISSLSFRSPPPSRLRSSVRSLRVKASSSSS 60
           MESL  L   +  +H  LSF+H  SSF K  SS S RS P  R  SS + + +KASSS S
Sbjct: 1   MESLGKLQLHQQPNH--LSFTHFSSSFPKKPSSFSLRSLP--RSTSSFKCISIKASSSKS 60

Query: 61  TSDDTTSPNGGLLSGFLKTACIS-VAVAAFFFHRFDYRRFVAVAVQVAP----ETTESTD 120
                +          LK+ C+S  A AA F      +   A+A  VA     E+ + ++
Sbjct: 61  QDSKLS---------ILKSTCVSFTAAAALFLVNLQLKPSPAIAAPVAATPLMESLKQSN 120

Query: 121 ESTEYEENESVVEEKRADDSNDVEALRSLVEESVKSGKLPEAVEALNRLIELEPNDVELP 180
            +  +EE E  +EE  A   +DVEALRSL+E  +KS KL EA+E ++RLIELEP + E P
Sbjct: 121 GNVSFEEEERSLEEYLASHPDDVEALRSLMEVRIKSRKLLEAIELIDRLIELEPEEKEWP 180

Query: 181 MLRANFHSYMGELELAKNEFEEILAKDPLRVEAYHGLAMVAEQLNDNSLKDVTKRIEEAM 240
           ML+AN  SY G+LE AK  FEEIL KDPLRVEAYHGL M      D+ L  V KRIEEAM
Sbjct: 181 MLKANIFSYSGDLESAKTGFEEILVKDPLRVEAYHGLVMAYSDSGDD-LNAVEKRIEEAM 240

Query: 241 EKCKNQKDKSDIRDFKLLVAQIKVMEGSYLDALKAYQELVREEPRDFRPYLCQGIIYTLL 300
            +CK +K++ D+RDFKLLVAQI+V+EG + +ALK Y+ELV+EEPRDFRPYLCQGIIYT+L
Sbjct: 241 VRCKKEKNRKDLRDFKLLVAQIRVIEGKHNEALKLYEELVKEEPRDFRPYLCQGIIYTVL 300

Query: 301 RKSEEAEKHFEKFRRLVPKNHPYKEYLDDNMYATKFFAQKVEKEGA 342
           +K  EAEK FEKFRRLVPKNHPY+EY  DNM A+K FA+KV++E A
Sbjct: 301 KKENEAEKQFEKFRRLVPKNHPYREYFMDNMVASKLFAEKVQREMA 332

[Close]

BLAST of IVF0016212 vs. TAIR 10
Match: AT3G53560.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 280.0 bits (715), Expect = 2.5e-75
Identity = 173/344 (50.29%), Postives = 227/344 (65.99%), Query Frame = 0


Query: 1   MESLP--SLHHRRFSSHQLLSFSHRLSS-FSKPISSLSFRSPPPSRLRSSVRSLRVKASS 60
           MESL    LHH+ F     LSF+H  SS F K +   S +        SS++S  +KASS
Sbjct: 1   MESLGKLQLHHQPFH----LSFTHTSSSTFPKNLFKSSIQP------ISSLKSASIKASS 60

Query: 61  SSSTSDDTTSPNGGLLSGFLKTACISVAVAAFFFHRFDYRRFVAVAVQVAPETTESTDES 120
           S   +  T  P       F K+ CI++  AA       + +  A+A  +AP  +  + E+
Sbjct: 61  SKFQNSITPLPKSTPFRLF-KSTCITLTTAAALLLANLHLKSPAIAAPIAPPPSVESKEN 120

Query: 121 TEYEENESVVEEKRADDSNDVEALRSLVEESVKSGKLPEAVEALNRLIELEPNDVELPML 180
              EE E  ++E      +DV+ALRSL+E  +KS KL EAVE ++RLI+LEP + E P+L
Sbjct: 121 VTLEEEERALDEHLITHPSDVDALRSLMEVKIKSRKLTEAVEVIDRLIKLEPEEKEWPVL 180

Query: 181 RANFHSYMGELELAKNEFEEILAKDPLRVEAYHGLAMVAEQLNDNSLKDVTKRIEEAMEK 240
           +AN  +Y G+L+LAK  FEEILAKDPLRVEAYHGL M         LK+V  RIEEAM K
Sbjct: 181 KANIFTYSGDLDLAKTGFEEILAKDPLRVEAYHGLLMAYSDAG-LDLKEVESRIEEAMLK 240

Query: 241 CKNQKDKSDIRDFKLLVAQIKVMEGSYLDALKAYQELVREEPRDFRPYLCQGIIYTLLRK 300
           CK + +++D RDFKLLVAQI+V+EG + +ALK YQELV+EEPRDFRPYLCQGIIYTLL+K
Sbjct: 241 CKKENNQNDFRDFKLLVAQIRVIEGKHSEALKLYQELVKEEPRDFRPYLCQGIIYTLLKK 300

Query: 301 SEEAEKHFEKFRRLVPKNHPYKEYLDDNMYATKFFAQKVEKEGA 342
            ++AE+ F+ FR+LVPKNHPY+EY  DNM ATK F++K ++E A
Sbjct: 301 KDKAEEQFDNFRKLVPKNHPYREYFMDNMIATKLFSEKAQREMA 332

[Close]

BLAST of IVF0016212 vs. TAIR 10
Match: AT5G02590.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 226.9 bits (577), Expect = 2.5e-59
Identity = 145/346 (41.91%), Postives = 212/346 (61.27%), Query Frame = 0


Query: 1   MESLPSLHHRRFSSHQLLSFSHRLSSFSKPISSLSFRSPPPSRLRSSVRSLRVKASSSSS 60
           M SL   H+   + H  L  +HR     KP+S      PPPSR+        ++ASS SS
Sbjct: 1   MVSLAKFHYCDQTLHLRLD-THRKPQ-PKPVSYRILHKPPPSRV--------IRASSFSS 60

Query: 61  TSDDTTSPNGGLLSGFLKTACISVAVAAFFFHRFDY--RRFVAVAVQVAPE--------- 120
               +          FLKT C+++  AA       +   + V  A  V+P          
Sbjct: 61  NPKPS----------FLKTTCVTLTTAAALLSASLHLSTKPVTAATLVSPPPPPSTAADL 120

Query: 121 TTESTDESTEYEENESVVEEKRADDSNDVEALRSLVEESVKSGKLPEAVEALNRLIELEP 180
           T++      + EE E+ +E+    + NDVEAL+SL++   ++  +  A+E LNRLIE++P
Sbjct: 121 TSDQISSRPKEEEEEAALEKHLTKNPNDVEALQSLMKIKFQTKNIDHALEILNRLIEIQP 180

Query: 181 NDVELPMLRANFHSYMGELELAKNEFEEILAKDPLRVEAYHGLAMVAEQLNDNSLKDVTK 240
            + E  +L+A   +Y G+ + A   FEE+L+KDP RVEAYHGL M   + +++ L ++  
Sbjct: 181 EEQEWRILKAQVQTYGGDFDSATKGFEEVLSKDPFRVEAYHGLVMAYSE-SESKLSEIES 240

Query: 241 RIEEAMEKCKNQKDKSDIRDFKLLVAQIKVMEGSYLDALKAYQELVREEPRDFRPYLCQG 300
           RI EA+EKCK +++K D RDF LL+AQI+V++G+ ++AL+ YQELV++EP+DFRPYLCQG
Sbjct: 241 RINEAIEKCK-KENKKDFRDFMLLIAQIRVIKGNPIEALRVYQELVKDEPKDFRPYLCQG 300

Query: 301 IIYTLLRKSEEAEKHFEKFRRLVPKNHPYKEYLDDNMYAT-KFFAQ 335
           +IYTL++K +EAEK F +FRRLVP+NHPYKEYLD N+  T K FA+
Sbjct: 301 LIYTLMKKKDEAEKQFAEFRRLVPENHPYKEYLDANVLNTNKLFAK 324

[Close]

BLAST of IVF0016212 vs. TAIR 10
Match: AT3G09490.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 161.4 bits (407), Expect = 1.3e-39
Identity = 115/294 (39.12%), Postives = 162/294 (55.10%), Query Frame = 0


Query: 28  SKPISSLSFRSPPPSRLRSSVRSLRVKASSSSSTSDDTTSPNGGLLSGFLKTACISVAVA 87
           SK    L FR    S   + +R   ++ASSSSS S+   S         LKT  IS+  A
Sbjct: 27  SKLSFPLLFRDQAKS---TPIRFPVIRASSSSSASNHKPS--------LLKTTFISLTAA 86

Query: 88  AFFFHRFDYRRFVAVAVQVAPETTESTDESTEYEENESVVEEKRADDSNDVEALRSLVEE 147
           A  F    Y  FV     + P               E+ +E+     SNDV AL  L E 
Sbjct: 87  AALFSASFY--FVNKRAAMTPVAVV-----------ETTLEKHLETQSNDVNALSLLTEI 146

Query: 148 SVKSGKLPEAVEALNRLIELEPNDVELPMLRANFHSYMGELELAKNEFEEILAKDPLRVE 207
             KS K  +A+  L+RLIE+EP + + P ++A   SY G+ E A   FEEIL KDP+RV+
Sbjct: 147 KFKSDKHEQAIVFLDRLIEIEPYERKWPAMKARILSYHGKSESAIEAFEEILEKDPIRVD 206

Query: 208 AYHGLAMVAEQLNDN-SLKDVTKRIEEAMEKCKNQKDKSDIRDFKLLVAQIKVMEGSYLD 267
           AYH L M  E  N    L ++ KRI + + +CK +K   +I  F++L+AQI+ +EG  ++
Sbjct: 207 AYHYLVM--EYYNSKPKLTEIEKRINKVIRRCKKEKKTKEILGFRMLIAQIRFIEGKSVE 266

Query: 268 ALKAYQELVREEPRDFRPYLCQGIIYTLLRKSEEAEKHFEKFRRLVPKNHPYKE 321
           A++  +ELV+E+P DF  YL QG++YTL+ K EEA K FE   R++P+NHP +E
Sbjct: 267 AIRICEELVKEDPNDFTIYLFQGVVYTLMNKGEEAAKQFEHVARVIPRNHPSRE 294

[Close]

BLAST of IVF0016212 vs. TAIR 10
Match: AT4G39470.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 151.4 bits (381), Expect = 1.4e-36
Identity = 79/203 (38.92%), Postives = 135/203 (66.50%), Query Frame = 0


Query: 122 ENESVVEEKRADDSNDVEALRSLVEESVKSGKLPEAVEALNRLIELEPNDVELPMLRANF 181
           E+E + E+   ++  ++EA++++V + ++ GK  +AV+ + +L++LEP++VE  +L A  
Sbjct: 117 EDEKMFEKLLENEPENMEAMKAVVYKKMRRGKNEDAVKYVEKLMKLEPHEVEWKLLEALC 176

Query: 182 HSYMGELELAKNEFEEILAKDPLRVEAYHGLAMVAEQLNDNSLKDVTKRIEEAMEKCKNQ 241
           +  MGEL  AK  +++IL + PL + A HGLAMV  + +D S+ D+   + EAME  +  
Sbjct: 177 YETMGELSKAKRLYKDILKEQPLLIRALHGLAMVMHKTHDTSVFDM---LIEAMEVARQG 236

Query: 242 KDKSDIRDFKLLVAQIKVMEGSYLDALKAYQELVREEPRDFRPYLCQGIIYTLLRKSEEA 301
              ++ R+ ++L+ Q+ ++EG + + LK +Q++V + PRDFRPYLCQGI+Y+L+ K EEA
Sbjct: 237 NRVTEERNIQVLIGQMHIVEGQFEEGLKIFQQMVNDNPRDFRPYLCQGIVYSLMDKKEEA 296

Query: 302 EKHFEKFRRLVPKNHPYKEYLDD 325
            + FE +  LVP   P K +LDD
Sbjct: 297 AQQFEIYWSLVPGEFPQKGFLDD 316

The following BLAST results are available for this feature:

BLAST of IVF0016212 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LS48	4.3e-27	31.25	protein SLOW GREEN 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SG1 PE=1 ...	[more]
Q54M21	3.9e-04	22.22	DnaJ homolog subfamily C member 3 homolog OS=Dictyostelium discoideum OX=44689 G...	[more]

BLAST of IVF0016212 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TWQ7	4.8e-183	100.00	Protein SLOW GREEN 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold908...	[more]
A0A1S3BI52	4.8e-183	100.00	protein SLOW GREEN 1, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103489908...	[more]
A0A0A0KXE2	3.2e-158	88.12	TPR_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G293280 ...	[more]
A0A6J1HFV1	8.1e-138	76.90	protein SLOW GREEN 1, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1IQW2	1.8e-137	77.12	protein SLOW GREEN 1, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC11147...	[more]

BLAST of IVF0016212 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008447473.1	5.41e-235	100.00	PREDICTED: protein SLOW GREEN 1, chloroplastic-like [Cucumis melo] >KAA0047338.1...	[more]
XP_011653615.1	2.18e-202	88.12	protein SLOW GREEN 1, chloroplastic [Cucumis sativus] >KGN54218.1 hypothetical p...	[more]
XP_038883735.1	3.36e-199	86.40	protein SLOW GREEN 1, chloroplastic-like [Benincasa hispida]	[more]
XP_023545038.1	1.37e-175	77.40	protein SLOW GREEN 1, chloroplastic-like [Cucurbita pepo subsp. pepo]	[more]
XP_022962798.1	2.85e-175	76.90	protein SLOW GREEN 1, chloroplastic-like [Cucurbita moschata]	[more]

BLAST of IVF0016212 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G37400.1	6.2e-82	53.76	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G53560.1	2.5e-75	50.29	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G02590.1	2.5e-59	41.91	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G09490.1	1.3e-39	39.12	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G39470.1	1.4e-36	38.92	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 224..244
None	No IPR available	PFAM	PF14559	TPR_19	coord: 150..212 e-value: 9.3E-6 score: 26.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 30..50
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 108..134
None	No IPR available	PANTHER	PTHR26312:SF162	BNAA03G17190D PROTEIN	coord: 18..339
None	No IPR available	PANTHER	PTHR26312	TETRATRICOPEPTIDE REPEAT PROTEIN 5	coord: 18..339
IPR019734	Tetratricopeptide repeat	SMART	SM00028	tpr_5	coord: 138..171 e-value: 14.0 score: 13.7 coord: 282..315 e-value: 1.7 score: 17.6 coord: 248..281 e-value: 360.0 score: 1.3 coord: 172..205 e-value: 330.0 score: 1.6
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 138..171 score: 9.1454
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 112..248 e-value: 7.0E-15 score: 57.2
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 250..329 e-value: 9.1E-8 score: 33.8
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 133..322

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0016212.2	IVF0016212.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005515	protein binding