
IVF0016123 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCAGAAAAAAACATCGGAAGAGGCATTCTCGACGTCGCATCATGTGTCAGCATAAGGTCCGTCGGGAGAGGAACTCTCGACGCCACTTTGGCCGACGCATGTCACGGCGTCAGAAGAGGCATTCCTGACGTCATGTTGGTATGGCGTCGAAAATGCTTCTCCTAA ATGTCAGAAAAAAACATCGGAAGAGGCATTCTCGACGTCGCATCATGTGTCAGCATAAGGTCCGTCGGGAGAGGAACTCTCGACGCCACTTTGGCCGACGCATGTCACGGCGTCAGAAGAGGCATTCCTGACGTCATGTTGGTATGGCGTCGAAAATGCTTCTCCTAA ATGTCAGAAAAAAACATCGGAAGAGGCATTCTCGACGTCGCATCATGTGTCAGCATAAGGTCCGTCGGGAGAGGAACTCTCGACGCCACTTTGGCCGACGCATGTCACGGCGTCAGAAGAGGCATTCCTGACGTCATGTTGGTATGGCGTCGAAAATGCTTCTCCTAA MSEKNIGRGILDVASCVSIRSVGRGTLDATLADACHGVRRGIPDVMLVWRRKCFS Homology
BLAST of IVF0016123 vs. ExPASy TrEMBL
Match: A0A5D3CX81 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold94G00790 PE=4 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 2.8e-08 Identity = 30/54 (55.56%), Postives = 38/54 (70.37%), Query Frame = 0
BLAST of IVF0016123 vs. ExPASy TrEMBL
Match: A0A5A7SSC5 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold701G00060 PE=4 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 1.1e-04 Identity = 27/53 (50.94%), Postives = 34/53 (64.15%), Query Frame = 0
BLAST of IVF0016123 vs. NCBI nr
Match: KAA0049602.1 (reverse transcriptase [Cucumis melo var. makuwa] >TYK15960.1 reverse transcriptase [Cucumis melo var. makuwa]) HSP 1 Score: 67.8 bits (164), Expect = 1.76e-11 Identity = 30/54 (55.56%), Postives = 38/54 (70.37%), Query Frame = 0
BLAST of IVF0016123 vs. NCBI nr
Match: KAA0032451.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYJ99895.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 55.8 bits (133), Expect = 3.50e-07 Identity = 27/53 (50.94%), Postives = 34/53 (64.15%), Query Frame = 0
BLAST of IVF0016123 vs. NCBI nr
Match: KAA0049649.1 (transposon protein, putative, CACTA, En/Spm sub-class, expressed [Cucumis melo var. makuwa] >TYK08908.1 transposon protein, putative, CACTA, En/Spm sub-class, expressed [Cucumis melo var. makuwa]) HSP 1 Score: 46.6 bits (109), Expect = 4.62e-04 Identity = 21/52 (40.38%), Postives = 30/52 (57.69%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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