Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAACCAGATAAACAGGGAAAAATTCTAACACCTCTAGAGCGACCAGGATTACCTAGGGTTCACCCCAATCGACCAATAGTGCAACCAAACTCCCTGGATATCAAATTAAAGGGATTAAATACTGATGAGCTAGCTTACTTAGGAACTGACACTGAAGCTCTCAGAGACATCCATTTCTAAGGAACACGTAGGAACCTCTTCCAAAAAAGAAATTGGTAATTTTGGAATGGGAAGCCTAAATACAATCAGCTATGATTCTCCAAAAAGTCTTCCTATCAAGGTTTACAACACTGATATGAAGAATCACTACAGAAGGCCATCACCACCAGACTTAGGATGGGATAACTTACGCCTAGATTTTCGATCTTTTGATGGAAATAATATCGAAACTTGGAGCATTGATGGATGTTCTGAAGGGCAGATGATGATCATTTTCCAAGAAATATTTGTTGCTGCAACTAGCTATATTAGGAGAATGAGTCAAAGAGAAATTGTTGACGTCTTAATTGTAGGGTTTACAAGAAACCTCAGAAGTTGGTGGCACAATCATCTTACTGATGCAAATAGAGAAGCCATAAAGGAAGCTGTTTTGGAAAAAATAGAACAATGA
mRNA sequence
ATGAAACCAGATAAACAGGGAAAAATTCTAACACCTCTAGAGCGACCAGGATTACCTAGGGTTCACCCCAATCGACCAATAGTGCAACCAAACTCCCTGGATATCAAATTAAAGGGATTAAATACTGATGAGCTAACATCCATTTCTAAGGAACACGTAGGAACCTCTTCCAAAAAAGAAATTGGTAATTTTGGAATGGGAAGCCTAAATACAATCAGCTATGATTCTCCAAAAAGTCTTCCTATCAAGGTTTACAACACTGATATGAAGAATCACTACAGAAGGCCATCACCACCAGACTTAGGATGGGATAACTTACGCCTAGATTTTCGATCTTTTGATGGAAATAATATCGAAACTTGGAGCATTGATGGATGTTCTGAAGGGCAGATGATGATCATTTTCCAAGAAATATTTGTTGCTGCAACTAGCTATATTAGGAGAATGAGTCAAAGAGAAATTGTTGACGTCTTAATTGTAGGGTTTACAAGAAACCTCAGAAGTTGGTGGCACAATCATCTTACTGATGCAAATAGAGAAGCCATAAAGGAAGCTGTTTTGGAAAAAATAGAACAATGA
Coding sequence (CDS)
ATGAAACCAGATAAACAGGGAAAAATTCTAACACCTCTAGAGCGACCAGGATTACCTAGGGTTCACCCCAATCGACCAATAGTGCAACCAAACTCCCTGGATATCAAATTAAAGGGATTAAATACTGATGAGCTAACATCCATTTCTAAGGAACACGTAGGAACCTCTTCCAAAAAAGAAATTGGTAATTTTGGAATGGGAAGCCTAAATACAATCAGCTATGATTCTCCAAAAAGTCTTCCTATCAAGGTTTACAACACTGATATGAAGAATCACTACAGAAGGCCATCACCACCAGACTTAGGATGGGATAACTTACGCCTAGATTTTCGATCTTTTGATGGAAATAATATCGAAACTTGGAGCATTGATGGATGTTCTGAAGGGCAGATGATGATCATTTTCCAAGAAATATTTGTTGCTGCAACTAGCTATATTAGGAGAATGAGTCAAAGAGAAATTGTTGACGTCTTAATTGTAGGGTTTACAAGAAACCTCAGAAGTTGGTGGCACAATCATCTTACTGATGCAAATAGAGAAGCCATAAAGGAAGCTGTTTTGGAAAAAATAGAACAATGA
Protein sequence
MKPDKQGKILTPLERPGLPRVHPNRPIVQPNSLDIKLKGLNTDELTSISKEHVGTSSKKEIGNFGMGSLNTISYDSPKSLPIKVYNTDMKNHYRRPSPPDLGWDNLRLDFRSFDGNNIETWSIDGCSEGQMMIIFQEIFVAATSYIRRMSQREIVDVLIVGFTRNLRSWWHNHLTDANREAIKEAVLEKIEQ
Homology
BLAST of IVF0016070 vs. ExPASy TrEMBL
Match:
A0A5A7SXJ8 (Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold49G00890 PE=4 SV=1)
HSP 1 Score: 320.9 bits (821), Expect = 3.7e-84
Identity = 161/202 (79.70%), Postives = 174/202 (86.14%), Query Frame = 0
Query: 1 MKPDKQGKILTPLERPGLPRVHPNRPIVQPNSLDIKLKGLNTDEL----------TSISK 60
MKPDKQ K LT E P LPRV PNRPIVQPNSLDIKL G +TDEL TSISK
Sbjct: 1 MKPDKQ-KTLTSPEWPELPRVDPNRPIVQPNSLDIKLMGSSTDELLEELTRKLSETSISK 60
Query: 61 EHVGTSSKKEIGNFGMGSLNTISYDSPKSLPIKVYNTDMKNHYRRPSPPDLGWDNLRLDF 120
E++GTSSK+E+ NF MGSLNTISYDSPK LPIK+YNTDMKNHY+RPSPPDLG D+LRLDF
Sbjct: 61 ENIGTSSKREVSNFEMGSLNTISYDSPKILPIKIYNTDMKNHYKRPSPPDLGCDDLRLDF 120
Query: 121 RSFDGNNIETWSIDGCSEGQMMIIFQEIFVAATSYIRRMSQREIVDVLIVGFTRNLRSWW 180
RSFDGNNIETW+IDGCSEGQMMIIFQE+FVAATSY+RRMSQREIVD L GFT NLRSWW
Sbjct: 121 RSFDGNNIETWNIDGCSEGQMMIIFQEMFVAATSYLRRMSQREIVDALTAGFTGNLRSWW 180
Query: 181 HNHLTDANREAIKEAVLEKIEQ 193
HNHLTDANREAIK+A+LEK EQ
Sbjct: 181 HNHLTDANREAIKDAILEKTEQ 201
BLAST of IVF0016070 vs. ExPASy TrEMBL
Match:
A0A5D3CLG3 (Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G00900 PE=4 SV=1)
HSP 1 Score: 320.5 bits (820), Expect = 4.9e-84
Identity = 157/197 (79.70%), Postives = 168/197 (85.28%), Query Frame = 0
Query: 3 PDKQGKILTPLERPGLPRVHPNRPIVQPNSLDIKLKGLNTDEL----------TSISKEH 62
PD Q K L PLE PGLPRV PN+PIVQPNSLDIKLKG +TDEL T ISKEH
Sbjct: 107 PDVQKKTLAPLELPGLPRVDPNQPIVQPNSLDIKLKGSSTDELLKELTRKLSETPISKEH 166
Query: 63 VGTSSKKEIGNFGMGSLNTISYDSPKSLPIKVYNTDMKNHYRRPSPPDLGWDNLRLDFRS 122
TSSKKEI NFGMGSLNTISYDSPK+ PIKVYNT+MKNHY+RPSPPDLGWD+LRLDFRS
Sbjct: 167 ARTSSKKEISNFGMGSLNTISYDSPKNFPIKVYNTNMKNHYKRPSPPDLGWDDLRLDFRS 226
Query: 123 FDGNNIETWSIDGCSEGQMMIIFQEIFVAATSYIRRMSQREIVDVLIVGFTRNLRSWWHN 182
FDGNNIETW+IDGCSEGQMMIIFQE+FVAATSY+RRMSQREIVD L GFT NLR+WWHN
Sbjct: 227 FDGNNIETWNIDGCSEGQMMIIFQEMFVAATSYLRRMSQREIVDALTAGFTGNLRNWWHN 286
Query: 183 HLTDANREAIKEAVLEK 190
LTDANREA+K VLEK
Sbjct: 287 RLTDANREALKNVVLEK 303
BLAST of IVF0016070 vs. ExPASy TrEMBL
Match:
A0A5D3DBQ3 (Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold392G00350 PE=4 SV=1)
HSP 1 Score: 308.9 bits (790), Expect = 1.5e-80
Identity = 154/199 (77.39%), Postives = 171/199 (85.93%), Query Frame = 0
Query: 1 MKPDKQGKILTPLERPGLPRVHPNRPIVQPNSLDIKLKGLNTDEL----------TSISK 60
MK DK+ + LTP ER GLPRV PNRPI+QPNSLDIKLKG +TDEL TSISK
Sbjct: 1 MKLDKK-ETLTPSERSGLPRVDPNRPIMQPNSLDIKLKGSSTDELLEELTRKLSETSISK 60
Query: 61 EHVGTSSKKEIGNFGMGSLNTISYDSPKSLPIKVYNTDMKNHYRRPSPPDLGWDNLRLDF 120
E++GTSSK+E+ NFGMG+LNTISYDS K LPIKVYNT+MKNHY++PSPPDLGWD+LR DF
Sbjct: 61 ENIGTSSKREVSNFGMGNLNTISYDSLKILPIKVYNTNMKNHYKKPSPPDLGWDDLRPDF 120
Query: 121 RSFDGNNIETWSIDGCSEGQMMIIFQEIFVAATSYIRRMSQREIVDVLIVGFTRNLRSWW 180
RSFD NNIETW+IDGCSEGQM IIFQE+FVAATSY+RRMSQREIVD L GFT NLRSWW
Sbjct: 121 RSFDKNNIETWNIDGCSEGQMAIIFQEMFVAATSYLRRMSQREIVDALTTGFTGNLRSWW 180
Query: 181 HNHLTDANREAIKEAVLEK 190
HNHLTD NREAIK+AVLEK
Sbjct: 181 HNHLTDENREAIKDAVLEK 198
BLAST of IVF0016070 vs. ExPASy TrEMBL
Match:
A0A5A7ULL8 (Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold701G00530 PE=4 SV=1)
HSP 1 Score: 265.8 bits (678), Expect = 1.4e-67
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0
Query: 66 MGSLNTISYDSPKSLPIKVYNTDMKNHYRRPSPPDLGWDNLRLDFRSFDGNNIETWSIDG 125
MGSLNTISYDSPKSLPIKVYNTDMKNHYRRPSPPDLGWDNLRLDFRSFDGNNIETWSIDG
Sbjct: 1 MGSLNTISYDSPKSLPIKVYNTDMKNHYRRPSPPDLGWDNLRLDFRSFDGNNIETWSIDG 60
Query: 126 CSEGQMMIIFQEIFVAATSYIRRMSQREIVDVLIVGFTRNLRSWWHNHLTDANREAIKEA 185
CSEGQMMIIFQEIFVAATSYIRRMSQREIVDVLIVGFTRNLRSWWHNHLTDANREAIKEA
Sbjct: 61 CSEGQMMIIFQEIFVAATSYIRRMSQREIVDVLIVGFTRNLRSWWHNHLTDANREAIKEA 120
Query: 186 VLEKIEQ 193
VLEKIEQ
Sbjct: 121 VLEKIEQ 127
BLAST of IVF0016070 vs. ExPASy TrEMBL
Match:
A0A5A7VII9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold238G001190 PE=4 SV=1)
HSP 1 Score: 265.8 bits (678), Expect = 1.4e-67
Identity = 135/178 (75.84%), Postives = 151/178 (84.83%), Query Frame = 0
Query: 1 MKPDKQGKILTPLERPGLPRVHPNRPIVQPNSLDIKLKGLNTDEL----------TSISK 60
MK DK+ + LTP ER GLPRV PNRPI+QPNSLDIKLKG +TDEL TSISK
Sbjct: 1 MKLDKK-ETLTPSERSGLPRVDPNRPIMQPNSLDIKLKGSSTDELLEELTRKLSETSISK 60
Query: 61 EHVGTSSKKEIGNFGMGSLNTISYDSPKSLPIKVYNTDMKNHYRRPSPPDLGWDNLRLDF 120
E++GTSSK+E+ NFGMG+LNTISYDS K LPIKVYNT+MKNHY++PSPPDLGWD+LR DF
Sbjct: 61 ENIGTSSKREVSNFGMGNLNTISYDSLKILPIKVYNTNMKNHYKKPSPPDLGWDDLRPDF 120
Query: 121 RSFDGNNIETWSIDGCSEGQMMIIFQEIFVAATSYIRRMSQREIVDVLIVGFTRNLRS 169
RSFD NNIETW+IDGCSEGQM IIFQE+FVAATSY+RRMSQREIVD L GFT NLRS
Sbjct: 121 RSFDKNNIETWNIDGCSEGQMAIIFQEMFVAATSYLRRMSQREIVDALTTGFTGNLRS 177
BLAST of IVF0016070 vs. NCBI nr
Match:
KAA0033915.1 (polyprotein [Cucumis melo var. makuwa] >TYK01297.1 polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 318 bits (816), Expect = 9.53e-108
Identity = 161/202 (79.70%), Postives = 174/202 (86.14%), Query Frame = 0
Query: 1 MKPDKQGKILTPLERPGLPRVHPNRPIVQPNSLDIKLKGLNTDEL----------TSISK 60
MKPDKQ K LT E P LPRV PNRPIVQPNSLDIKL G +TDEL TSISK
Sbjct: 1 MKPDKQ-KTLTSPEWPELPRVDPNRPIVQPNSLDIKLMGSSTDELLEELTRKLSETSISK 60
Query: 61 EHVGTSSKKEIGNFGMGSLNTISYDSPKSLPIKVYNTDMKNHYRRPSPPDLGWDNLRLDF 120
E++GTSSK+E+ NF MGSLNTISYDSPK LPIK+YNTDMKNHY+RPSPPDLG D+LRLDF
Sbjct: 61 ENIGTSSKREVSNFEMGSLNTISYDSPKILPIKIYNTDMKNHYKRPSPPDLGCDDLRLDF 120
Query: 121 RSFDGNNIETWSIDGCSEGQMMIIFQEIFVAATSYIRRMSQREIVDVLIVGFTRNLRSWW 180
RSFDGNNIETW+IDGCSEGQMMIIFQE+FVAATSY+RRMSQREIVD L GFT NLRSWW
Sbjct: 121 RSFDGNNIETWNIDGCSEGQMMIIFQEMFVAATSYLRRMSQREIVDALTAGFTGNLRSWW 180
Query: 181 HNHLTDANREAIKEAVLEKIEQ 192
HNHLTDANREAIK+A+LEK EQ
Sbjct: 181 HNHLTDANREAIKDAILEKTEQ 201
BLAST of IVF0016070 vs. NCBI nr
Match:
KAA0049723.1 (polyprotein [Cucumis melo var. makuwa] >TYK12152.1 polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 318 bits (816), Expect = 7.84e-107
Identity = 157/197 (79.70%), Postives = 168/197 (85.28%), Query Frame = 0
Query: 3 PDKQGKILTPLERPGLPRVHPNRPIVQPNSLDIKLKGLNTDEL----------TSISKEH 62
PD Q K L PLE PGLPRV PN+PIVQPNSLDIKLKG +TDEL T ISKEH
Sbjct: 107 PDVQKKTLAPLELPGLPRVDPNQPIVQPNSLDIKLKGSSTDELLKELTRKLSETPISKEH 166
Query: 63 VGTSSKKEIGNFGMGSLNTISYDSPKSLPIKVYNTDMKNHYRRPSPPDLGWDNLRLDFRS 122
TSSKKEI NFGMGSLNTISYDSPK+ PIKVYNT+MKNHY+RPSPPDLGWD+LRLDFRS
Sbjct: 167 ARTSSKKEISNFGMGSLNTISYDSPKNFPIKVYNTNMKNHYKRPSPPDLGWDDLRLDFRS 226
Query: 123 FDGNNIETWSIDGCSEGQMMIIFQEIFVAATSYIRRMSQREIVDVLIVGFTRNLRSWWHN 182
FDGNNIETW+IDGCSEGQMMIIFQE+FVAATSY+RRMSQREIVD L GFT NLR+WWHN
Sbjct: 227 FDGNNIETWNIDGCSEGQMMIIFQEMFVAATSYLRRMSQREIVDALTAGFTGNLRNWWHN 286
Query: 183 HLTDANREAIKEAVLEK 189
LTDANREA+K VLEK
Sbjct: 287 RLTDANREALKNVVLEK 303
BLAST of IVF0016070 vs. NCBI nr
Match:
TYK21071.1 (polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 307 bits (786), Expect = 7.98e-104
Identity = 154/199 (77.39%), Postives = 171/199 (85.93%), Query Frame = 0
Query: 1 MKPDKQGKILTPLERPGLPRVHPNRPIVQPNSLDIKLKGLNTDEL----------TSISK 60
MK DK+ + LTP ER GLPRV PNRPI+QPNSLDIKLKG +TDEL TSISK
Sbjct: 1 MKLDKK-ETLTPSERSGLPRVDPNRPIMQPNSLDIKLKGSSTDELLEELTRKLSETSISK 60
Query: 61 EHVGTSSKKEIGNFGMGSLNTISYDSPKSLPIKVYNTDMKNHYRRPSPPDLGWDNLRLDF 120
E++GTSSK+E+ NFGMG+LNTISYDS K LPIKVYNT+MKNHY++PSPPDLGWD+LR DF
Sbjct: 61 ENIGTSSKREVSNFGMGNLNTISYDSLKILPIKVYNTNMKNHYKKPSPPDLGWDDLRPDF 120
Query: 121 RSFDGNNIETWSIDGCSEGQMMIIFQEIFVAATSYIRRMSQREIVDVLIVGFTRNLRSWW 180
RSFD NNIETW+IDGCSEGQM IIFQE+FVAATSY+RRMSQREIVD L GFT NLRSWW
Sbjct: 121 RSFDKNNIETWNIDGCSEGQMAIIFQEMFVAATSYLRRMSQREIVDALTTGFTGNLRSWW 180
Query: 181 HNHLTDANREAIKEAVLEK 189
HNHLTD NREAIK+AVLEK
Sbjct: 181 HNHLTDENREAIKDAVLEK 198
BLAST of IVF0016070 vs. NCBI nr
Match:
KAA0056803.1 (polyprotein [Cucumis melo var. makuwa] >TYJ99927.1 polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 265 bits (676), Expect = 3.39e-88
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0
Query: 66 MGSLNTISYDSPKSLPIKVYNTDMKNHYRRPSPPDLGWDNLRLDFRSFDGNNIETWSIDG 125
MGSLNTISYDSPKSLPIKVYNTDMKNHYRRPSPPDLGWDNLRLDFRSFDGNNIETWSIDG
Sbjct: 1 MGSLNTISYDSPKSLPIKVYNTDMKNHYRRPSPPDLGWDNLRLDFRSFDGNNIETWSIDG 60
Query: 126 CSEGQMMIIFQEIFVAATSYIRRMSQREIVDVLIVGFTRNLRSWWHNHLTDANREAIKEA 185
CSEGQMMIIFQEIFVAATSYIRRMSQREIVDVLIVGFTRNLRSWWHNHLTDANREAIKEA
Sbjct: 61 CSEGQMMIIFQEIFVAATSYIRRMSQREIVDVLIVGFTRNLRSWWHNHLTDANREAIKEA 120
Query: 186 VLEKIEQ 192
VLEKIEQ
Sbjct: 121 VLEKIEQ 127
BLAST of IVF0016070 vs. NCBI nr
Match:
TYK22191.1 (polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 257 bits (657), Expect = 1.23e-83
Identity = 135/192 (70.31%), Postives = 148/192 (77.08%), Query Frame = 0
Query: 1 MKPDKQGKILTPLERPGLPRVHPNRPIVQPNSLDIKLKGLNTDELTSISKEHVGTSSKKE 60
MKPDK GK L LE PGLP+V PNRPIVQPN LDIKLK +TDEL +E S+
Sbjct: 51 MKPDKLGKALALLEWPGLPKVVPNRPIVQPNFLDIKLKRSSTDELI---EELTRKLSETY 110
Query: 61 IGNFGMGSLNTISYDSPKSLPIKVYNTDMKNHYRRPSPPDLGWDNLRLDFRSFDGNNIET 120
I N YDS K LPIKVYNTDMKNHY+RPSPPDL D+L LDFRSFDGNNIET
Sbjct: 111 IFN----------YDSQKILPIKVYNTDMKNHYKRPSPPDLRCDDLHLDFRSFDGNNIET 170
Query: 121 WSIDGCSEGQMMIIFQEIFVAATSYIRRMSQREIVDVLIVGFTRNLRSWWHNHLTDANRE 180
W+++ C EGQMMII QE+FVAATSY+RRMSQ+EI+D L GFT NLRSWWHNHLTDANRE
Sbjct: 171 WNVEECYEGQMMIILQEMFVAATSYLRRMSQKEIIDALTAGFTGNLRSWWHNHLTDANRE 229
Query: 181 AIKEAVLEKIEQ 192
AIKEAVLEK EQ
Sbjct: 231 AIKEAVLEKTEQ 229
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5A7SXJ8 | 3.7e-84 | 79.70 | Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold49G00890 PE=... | [more] |
| A0A5D3CLG3 | 4.9e-84 | 79.70 | Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G00900 PE... | [more] |
| A0A5D3DBQ3 | 1.5e-80 | 77.39 | Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold392G00350 PE... | [more] |
| A0A5A7ULL8 | 1.4e-67 | 100.00 | Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold701G00530 PE... | [more] |
| A0A5A7VII9 | 1.4e-67 | 75.84 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KAA0033915.1 | 9.53e-108 | 79.70 | polyprotein [Cucumis melo var. makuwa] >TYK01297.1 polyprotein [Cucumis melo var... | [more] |
| KAA0049723.1 | 7.84e-107 | 79.70 | polyprotein [Cucumis melo var. makuwa] >TYK12152.1 polyprotein [Cucumis melo var... | [more] |
| TYK21071.1 | 7.98e-104 | 77.39 | polyprotein [Cucumis melo var. makuwa] | [more] |
| KAA0056803.1 | 3.39e-88 | 100.00 | polyprotein [Cucumis melo var. makuwa] >TYJ99927.1 polyprotein [Cucumis melo var... | [more] |
| TYK22191.1 | 1.23e-83 | 70.31 | polyprotein [Cucumis melo var. makuwa] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
