IVF0016064 (gene) Melon (IVF77) v1

Overview


Name	IVF0016064
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Methyltransferase-related protein
Location	chr12: 510623 .. 510983 (-)
RNA-Seq Expression	IVF0016064
Synteny	IVF0016064

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGTCCGCTGAGATTTATTCTCATATTTCTCTCAGCGACTCTTGCCGGCTTCTTCCTTATCCGTAACCTCAAATCTCCCTCTCAAGATTTCCACGCCCAAGACCATACTTCCGATTCCAATTCCTCTTCATCCCCCAACTCCAACAAGGTCCTTCTTCCTCACTTCTTATACAATTCTTCTTTAATTTCTTCCATTTCCATATCAAATCTTTCTTTCATTAATATTTGGTGTGTACGTACGTGTCGTATATATGTTTGAACAGATCTCATCGGGGTTCTGGACGGTGGTAGATATGGCTTCCGGTCGCTACTTATGGAGGCATTTGTTTTCGTCGTCGTCGGAGAAGGCTTCCGATTGA

mRNA sequence

ATGTGTCCGCTGAGATTTATTCTCATATTTCTCTCAGCGACTCTTGCCGGCTTCTTCCTTATCCGTAACCTCAAATCTCCCTCTCAAGATTTCCACGCCCAAGACCATACTTCCGATTCCAATTCCTCTTCATCCCCCAACTCCAACAAGATCTCATCGGGGTTCTGGACGGTGGTAGATATGGCTTCCGGTCGCTACTTATGGAGGCATTTGTTTTCGTCGTCGTCGGAGAAGGCTTCCGATTGA

Coding sequence (CDS)

ATGTGTCCGCTGAGATTTATTCTCATATTTCTCTCAGCGACTCTTGCCGGCTTCTTCCTTATCCGTAACCTCAAATCTCCCTCTCAAGATTTCCACGCCCAAGACCATACTTCCGATTCCAATTCCTCTTCATCCCCCAACTCCAACAAGATCTCATCGGGGTTCTGGACGGTGGTAGATATGGCTTCCGGTCGCTACTTATGGAGGCATTTGTTTTCGTCGTCGTCGGAGAAGGCTTCCGATTGA

Protein sequence

MCPLRFILIFLSATLAGFFLIRNLKSPSQDFHAQDHTSDSNSSSSPNSNKISSGFWTVVDMASGRYLWRHLFSSSSEKASD

Homology

[Close]

BLAST of IVF0016064 vs. ExPASy TrEMBL
Match: A0A5A7V291 (Putative Methyltransferase-related protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G00570 PE=4 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 4.6e-36
Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0


Query: 1  MCPLRFILIFLSATLAGFFLIRNLKSPSQDFHAQDHTSDSNSSSSPNSNKISSGFWTVVD 60
          MCPLRFILIFLSATLAGFFLIRNLKSPSQDFHAQDHTSDSNSSSSPNSNKISSGFWTVVD
Sbjct: 1  MCPLRFILIFLSATLAGFFLIRNLKSPSQDFHAQDHTSDSNSSSSPNSNKISSGFWTVVD 60

Query: 61 MASGRYLWRHLFSSSSEKASD 82
          MASGRYLWRHLFSSSSEKASD
Sbjct: 61 MASGRYLWRHLFSSSSEKASD 81

[Close]

BLAST of IVF0016064 vs. ExPASy TrEMBL
Match: A0A0A0LVB2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G533620 PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 6.9e-32
Identity = 77/82 (93.90%), Postives = 77/82 (93.90%), Query Frame = 0


Query: 1  MCPLRFILIFLSATLAGFFLIRNLKSPSQDFHAQDHTSDSNSSSSPNSNKISSGFWTVVD 60
          MCPLR ILIFLSATLAGF LIRNLKSPSQDFHA DHT DSNSSSSPNSNKISSGFWTVVD
Sbjct: 1  MCPLRLILIFLSATLAGFVLIRNLKSPSQDFHADDHTFDSNSSSSPNSNKISSGFWTVVD 60

Query: 61 MASGRYLWRHLF-SSSSEKASD 82
          MASGRYLWRHLF SSSSEKASD
Sbjct: 61 MASGRYLWRHLFSSSSSEKASD 82

[Close]

BLAST of IVF0016064 vs. ExPASy TrEMBL
Match: A0A6J1DPZ0 (uncharacterized protein LOC111022014 OS=Momordica charantia OX=3673 GN=LOC111022014 PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 3.8e-22
Identity = 63/88 (71.59%), Postives = 72/88 (81.82%), Query Frame = 0


Query: 1  MCPLRFILIFLSATLAGFFLIRNLKSPSQDFHAQDHTSDSNSS------SSPNSNKISSG 60
          MCPLRFILIFLSATLAGFF++RNLKS  QDF A D  SD++S+      SS +++K+SSG
Sbjct: 1  MCPLRFILIFLSATLAGFFVLRNLKSQPQDFEAADDNSDAHSNDSSAAHSSNSTSKVSSG 60

Query: 61 FWTVVDMASGRYLWRHLF-SSSSEKASD 82
          FWTVVDMASGRYLWRHLF SSSS K SD
Sbjct: 61 FWTVVDMASGRYLWRHLFPSSSSPKRSD 88

[Close]

BLAST of IVF0016064 vs. ExPASy TrEMBL
Match: A0A1S3BWD8 (uncharacterized protein LOC103494193 OS=Cucumis melo OX=3656 GN=LOC103494193 PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 4.2e-21
Identity = 61/85 (71.76%), Postives = 70/85 (82.35%), Query Frame = 0


Query: 1  MCPLRFILIFLSATLAGFFLIRNLKSPSQDFHAQDHTSDS----NSSSSPNSNKISSGFW 60
          MCPLRFILIFLSATLAGFF++RNLKS  QDF A D++ DS    +SS S + +K+SSGFW
Sbjct: 1  MCPLRFILIFLSATLAGFFVLRNLKSQPQDFVAGDNSDDSSKELDSSDSTSCSKVSSGFW 60

Query: 61 TVVDMASGRYLWRHLFSSSSEKASD 82
          TVVDMASGRYLWRHLF  SS+K SD
Sbjct: 61 TVVDMASGRYLWRHLF-PSSKKPSD 84

[Close]

BLAST of IVF0016064 vs. ExPASy TrEMBL
Match: A0A0A0LV42 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G025180 PE=4 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 2.1e-20
Identity = 59/85 (69.41%), Postives = 70/85 (82.35%), Query Frame = 0


Query: 1  MCPLRFILIFLSATLAGFFLIRNLKSPSQDFHAQDHTSDS----NSSSSPNSNKISSGFW 60
          MCPLRFILIFLSATLAGFF++RNLKS  QDF A D++ D+    +SS S + +K+SSGFW
Sbjct: 1  MCPLRFILIFLSATLAGFFVLRNLKSQPQDFVAGDNSDDNSNEFDSSDSSSCSKVSSGFW 60

Query: 61 TVVDMASGRYLWRHLFSSSSEKASD 82
          T+VDMASGRYLWRHLF  SS+K SD
Sbjct: 61 TLVDMASGRYLWRHLF-PSSKKPSD 84

[Close]

BLAST of IVF0016064 vs. NCBI nr
Match: KAA0060005.1 (putative Methyltransferase-related protein [Cucumis melo var. makuwa] >TYJ97263.1 putative Methyltransferase-related protein [Cucumis melo var. makuwa])

HSP 1 Score: 158 bits (400), Expect = 1.10e-48
Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0


Query: 1  MCPLRFILIFLSATLAGFFLIRNLKSPSQDFHAQDHTSDSNSSSSPNSNKISSGFWTVVD 60
          MCPLRFILIFLSATLAGFFLIRNLKSPSQDFHAQDHTSDSNSSSSPNSNKISSGFWTVVD
Sbjct: 1  MCPLRFILIFLSATLAGFFLIRNLKSPSQDFHAQDHTSDSNSSSSPNSNKISSGFWTVVD 60

Query: 61 MASGRYLWRHLFSSSSEKASD 81
          MASGRYLWRHLFSSSSEKASD
Sbjct: 61 MASGRYLWRHLFSSSSEKASD 81

[Close]

BLAST of IVF0016064 vs. NCBI nr
Match: KGN65855.1 (hypothetical protein Csa_023267 [Cucumis sativus])

HSP 1 Score: 144 bits (364), Expect = 3.53e-43
Identity = 77/82 (93.90%), Postives = 77/82 (93.90%), Query Frame = 0


Query: 1  MCPLRFILIFLSATLAGFFLIRNLKSPSQDFHAQDHTSDSNSSSSPNSNKISSGFWTVVD 60
          MCPLR ILIFLSATLAGF LIRNLKSPSQDFHA DHT DSNSSSSPNSNKISSGFWTVVD
Sbjct: 1  MCPLRLILIFLSATLAGFVLIRNLKSPSQDFHADDHTFDSNSSSSPNSNKISSGFWTVVD 60

Query: 61 MASGRYLWRHLFSSSS-EKASD 81
          MASGRYLWRHLFSSSS EKASD
Sbjct: 61 MASGRYLWRHLFSSSSSEKASD 82

[Close]

BLAST of IVF0016064 vs. NCBI nr
Match: XP_038895770.1 (uncharacterized protein LOC120083933 [Benincasa hispida])

HSP 1 Score: 120 bits (301), Expect = 1.57e-33
Identity = 69/87 (79.31%), Postives = 75/87 (86.21%), Query Frame = 0


Query: 1  MCPLRFILIFLSATLAGFFLIRNLKSPSQDFHAQDHTS------DSNSSSSPNSNKISSG 60
          MCPLRFILIFLSATLAGFFL+RNLKSPSQDF A D++       DSNSSSS +S+K+SSG
Sbjct: 1  MCPLRFILIFLSATLAGFFLLRNLKSPSQDFQADDNSDSHSKDLDSNSSSS-SSSKLSSG 60

Query: 61 FWTVVDMASGRYLWRHLFSSSSEKASD 81
          FWTVVDMASGRYLWRHLFSSS EK SD
Sbjct: 61 FWTVVDMASGRYLWRHLFSSS-EKPSD 85

[Close]

BLAST of IVF0016064 vs. NCBI nr
Match: XP_022154856.1 (uncharacterized protein LOC111022014 [Momordica charantia])

HSP 1 Score: 112 bits (280), Expect = 2.73e-30
Identity = 64/88 (72.73%), Postives = 73/88 (82.95%), Query Frame = 0


Query: 1  MCPLRFILIFLSATLAGFFLIRNLKSPSQDFHAQD-----HTSDSNSSSSPNS-NKISSG 60
          MCPLRFILIFLSATLAGFF++RNLKS  QDF A D     H++DS+++ S NS +K+SSG
Sbjct: 1  MCPLRFILIFLSATLAGFFVLRNLKSQPQDFEAADDNSDAHSNDSSAAHSSNSTSKVSSG 60

Query: 61 FWTVVDMASGRYLWRHLF-SSSSEKASD 81
          FWTVVDMASGRYLWRHLF SSSS K SD
Sbjct: 61 FWTVVDMASGRYLWRHLFPSSSSPKRSD 88

[Close]

BLAST of IVF0016064 vs. NCBI nr
Match: XP_008453499.1 (PREDICTED: uncharacterized protein LOC103494193 [Cucumis melo])

HSP 1 Score: 108 bits (271), Expect = 5.72e-29
Identity = 61/85 (71.76%), Postives = 70/85 (82.35%), Query Frame = 0


Query: 1  MCPLRFILIFLSATLAGFFLIRNLKSPSQDFHAQDHTSDSN----SSSSPNSNKISSGFW 60
          MCPLRFILIFLSATLAGFF++RNLKS  QDF A D++ DS+    SS S + +K+SSGFW
Sbjct: 1  MCPLRFILIFLSATLAGFFVLRNLKSQPQDFVAGDNSDDSSKELDSSDSTSCSKVSSGFW 60

Query: 61 TVVDMASGRYLWRHLFSSSSEKASD 81
          TVVDMASGRYLWRHLF SS +K SD
Sbjct: 61 TVVDMASGRYLWRHLFPSS-KKPSD 84

[Close]

BLAST of IVF0016064 vs. TAIR 10
Match: AT5G58375.1 (Methyltransferase-related protein )

HSP 1 Score: 74.7 bits (182), Expect = 3.8e-14
Identity = 45/85 (52.94%), Postives = 54/85 (63.53%), Query Frame = 0


Query: 1  MCPLRFILIFLSATLAGFFLIRNLKSPSQD-----FHAQDHT-SDSNSSSSPNSNKISSG 60
          MCPLR ILIFLSATLAGFF+++ L S S D     F   +H   DS S  S     + SG
Sbjct: 1  MCPLRLILIFLSATLAGFFVLQKLNSTSDDPLDDSFTDAEHADDDSVSGFSKVGMAMKSG 60

Query: 61 FWTVVDMASGRYLWRHLFSSSSEKA 80
          FWT VDMASGRYLW +L S++   +
Sbjct: 61 FWTCVDMASGRYLWNNLCSNAKRSS 85

[Close]

BLAST of IVF0016064 vs. TAIR 10
Match: AT5G18150.1 (Methyltransferase-related protein )

HSP 1 Score: 63.5 bits (153), Expect = 8.7e-11
Identity = 33/71 (46.48%), Postives = 47/71 (66.20%), Query Frame = 0


Query: 1  MCPLRFILIFLSATLAGFFLIRNLKSPSQDFHAQDHTSDSNSSSSPNSNKISSGFWTVVD 60
          MCP+RF+L+F SA LAG+F  + + S S +F + D  ++    +     K+ +GFW  VD
Sbjct: 1  MCPMRFLLVFFSAVLAGYFAWKTVSS-SPEFDSPDELNEKQELNL--KKKMENGFWVFVD 60

Query: 61 MASGRYLWRHL 72
          MASGRYLWR+L
Sbjct: 61 MASGRYLWRNL 68

[Close]

BLAST of IVF0016064 vs. TAIR 10
Match: AT5G14602.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: Methyltransferase-related protein (TAIR:AT5G18150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 60.1 bits (144), Expect = 9.6e-10
Identity = 32/72 (44.44%), Postives = 45/72 (62.50%), Query Frame = 0


Query: 1  MCPLRFILIFLSATLAGFFLIRNLKSPSQDFHAQDHTSDSNSSSSPN-SNKISSGFWTVV 60
          MCPLRF+L+F SA LAG+   R + S  + F  +   +++      +   K+ +G WT V
Sbjct: 1  MCPLRFVLVFFSAVLAGYIAWRTVNSTPELFSDELLQAEAKEKQGLDFKRKMDNGLWTFV 60

Query: 61 DMASGRYLWRHL 72
          DMASGRYLWR+L
Sbjct: 61 DMASGRYLWRNL 72

The following BLAST results are available for this feature:

BLAST of IVF0016064 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0016064 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V291	4.6e-36	100.00	Putative Methyltransferase-related protein OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A0A0LVB2	6.9e-32	93.90	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G533620 PE=4 SV=1	[more]
A0A6J1DPZ0	3.8e-22	71.59	uncharacterized protein LOC111022014 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]
A0A1S3BWD8	4.2e-21	71.76	uncharacterized protein LOC103494193 OS=Cucumis melo OX=3656 GN=LOC103494193 PE=...	[more]
A0A0A0LV42	2.1e-20	69.41	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G025180 PE=4 SV=1	[more]

BLAST of IVF0016064 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0060005.1	1.10e-48	100.00	putative Methyltransferase-related protein [Cucumis melo var. makuwa] >TYJ97263....	[more]
KGN65855.1	3.53e-43	93.90	hypothetical protein Csa_023267 [Cucumis sativus]	[more]
XP_038895770.1	1.57e-33	79.31	uncharacterized protein LOC120083933 [Benincasa hispida]	[more]
XP_022154856.1	2.73e-30	72.73	uncharacterized protein LOC111022014 [Momordica charantia]	[more]
XP_008453499.1	5.72e-29	71.76	PREDICTED: uncharacterized protein LOC103494193 [Cucumis melo]	[more]

BLAST of IVF0016064 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G58375.1	3.8e-14	52.94	Methyltransferase-related protein	[more]
AT5G18150.1	8.7e-11	46.48	Methyltransferase-related protein	[more]
AT5G14602.1	9.6e-10	44.44	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..52
None	No IPR available	PANTHER	PTHR34132	EMB\|CAB87627.1-RELATED	coord: 1..79
None	No IPR available	PANTHER	PTHR34132:SF4	EXPRESSED PROTEIN	coord: 1..79

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0016064.1	IVF0016064.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032259	methylation
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0008168	methyltransferase activity