IVF0016059 (gene) Melon (IVF77) v1

Overview


Name	IVF0016059
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Plant/protein
Location	chr05: 25720167 .. 25720499 (-)
RNA-Seq Expression	IVF0016059
Synteny	IVF0016059

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACCACCAATCTACTCATCTTTCGCCCTATCAGAATCCAACCATCTGCCACCTCTGGCTCCAGCTCCGGTCACCGAAAACCTATACCCCACCGCAAAGGTAGGCCTCAATGGAGACCTGACCTGCCAGACTACATCAGCGACAACATGGAGCCAGATTTGGATTCAACGGAGGAGGTGACAGAATCCCAACTCTCTGTTGGTTGCTTCACAGAGGAGAAGGCAAAGCAACTCCGAATTATGACGACGAAGGCTAATTCGTTTCGGGATGGAATGTACCATTCGGCCATCGCATCTCGCTTAGCTTCTGATTTCTCAAACACTAACAATTAG

mRNA sequence

ATGACCACCAATCTACTCATCTTTCGCCCTATCAGAATCCAACCATCTGCCACCTCTGGCTCCAGCTCCGGTCACCGAAAACCTATACCCCACCGCAAAGGTAGGCCTCAATGGAGACCTGACCTGCCAGACTACATCAGCGACAACATGGAGCCAGATTTGGATTCAACGGAGGAGGTGACAGAATCCCAACTCTCTGTTGGTTGCTTCACAGAGGAGAAGGCAAAGCAACTCCGAATTATGACGACGAAGGCTAATTCGTTTCGGGATGGAATGTACCATTCGGCCATCGCATCTCGCTTAGCTTCTGATTTCTCAAACACTAACAATTAG

Coding sequence (CDS)

ATGACCACCAATCTACTCATCTTTCGCCCTATCAGAATCCAACCATCTGCCACCTCTGGCTCCAGCTCCGGTCACCGAAAACCTATACCCCACCGCAAAGGTAGGCCTCAATGGAGACCTGACCTGCCAGACTACATCAGCGACAACATGGAGCCAGATTTGGATTCAACGGAGGAGGTGACAGAATCCCAACTCTCTGTTGGTTGCTTCACAGAGGAGAAGGCAAAGCAACTCCGAATTATGACGACGAAGGCTAATTCGTTTCGGGATGGAATGTACCATTCGGCCATCGCATCTCGCTTAGCTTCTGATTTCTCAAACACTAACAATTAG

Protein sequence

MTTNLLIFRPIRIQPSATSGSSSGHRKPIPHRKGRPQWRPDLPDYISDNMEPDLDSTEEVTESQLSVGCFTEEKAKQLRIMTTKANSFRDGMYHSAIASRLASDFSNTNN

Homology

[Close]

BLAST of IVF0016059 vs. ExPASy TrEMBL
Match: A0A5A7V2V1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold41G001490 PE=4 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 1.2e-50
Identity = 107/110 (97.27%), Postives = 107/110 (97.27%), Query Frame = 0


Query: 1   MTTNLLIFRPIRIQPSATSGSSSGHRKPIPHRKGRPQWRPDLPDYISDNMEPDLDSTEEV 60
           MTTNLLIFRPIRIQ SATSGSSSGHRKPIPHRKGRPQWRPDLPDYISDNMEPDLDSTEEV
Sbjct: 1   MTTNLLIFRPIRIQQSATSGSSSGHRKPIPHRKGRPQWRPDLPDYISDNMEPDLDSTEEV 60

Query: 61  TESQLSVGCFTEEKAKQLRIMTTKANSFRDGMYHSAIASRLASDFSNTNN 111
           TESQLSVGCFT EKAKQLRIMTTKANSF DGMYHSAIASRLASDFSNTNN
Sbjct: 61  TESQLSVGCFT-EKAKQLRIMTTKANSFWDGMYHSAIASRLASDFSNTNN 109

[Close]

BLAST of IVF0016059 vs. ExPASy TrEMBL
Match: A0A5D3BEV3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G00030 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 4.2e-32
Identity = 71/73 (97.26%), Postives = 71/73 (97.26%), Query Frame = 0


Query: 1  MTTNLLIFRPIRIQPSATSGSSSGHRKPIPHRKGRPQWRPDLPDYISDNMEPDLDSTEEV 60
          MTTNLLIFRPIRIQPSATSGSSSGHRKPIPHRKGRPQWRPDLPDYISDNMEPDLDSTEEV
Sbjct: 1  MTTNLLIFRPIRIQPSATSGSSSGHRKPIPHRKGRPQWRPDLPDYISDNMEPDLDSTEEV 60

Query: 61 TESQLSVGCFTEE 74
          TESQLSVGCF  E
Sbjct: 61 TESQLSVGCFRGE 73

[Close]

BLAST of IVF0016059 vs. ExPASy TrEMBL
Match: A0A0A0LI01 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G006010 PE=4 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 1.3e-28
Identity = 71/89 (79.78%), Postives = 76/89 (85.39%), Query Frame = 0


Query: 1  MTTNLLIFRPIRIQPSATSGSSSGHRKP--IPHRKGRPQWRPDLPDYISDNMEPDLDSTE 60
          MTTNLLIFRPIRIQPSATSGSSSGHRKP  IP R G PQWR D PDYI DN+EPD  ST+
Sbjct: 1  MTTNLLIFRPIRIQPSATSGSSSGHRKPISIPCRHGWPQWRLDPPDYIGDNVEPDSYSTK 60

Query: 61 EVTESQLSVGCFTEEKAKQLRIMTTKANS 88
          +VTESQLS GC TEEKAKQLRIMTT+ N+
Sbjct: 61 KVTESQLSAGCLTEEKAKQLRIMTTRYNT 89

[Close]

BLAST of IVF0016059 vs. ExPASy TrEMBL
Match: A0A6J1KDY2 (uncharacterized protein LOC111493481 OS=Cucurbita maxima OX=3661 GN=LOC111493481 PE=4 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 2.3e-25
Identity = 66/116 (56.90%), Postives = 84/116 (72.41%), Query Frame = 0


Query: 1   MTTNLLIFRPIRIQPSATSGSSSGHRKPIPHRKGRPQWRPDLPDYISDNMEPDLDS---- 60
           MTTNLL+FRPI I+PSA++G  +GHRKP P R  RP W+P  P+ I++  +PD +S    
Sbjct: 1   MTTNLLVFRPIGIRPSASAG--TGHRKPDPQRHYRPWWKPCPPNKITEGAQPDPNSDSNS 60

Query: 61  --TEEVTESQLSVGCFTEEKAKQLRIMTTKANSFRDGMYHSAIASRLASDFSNTNN 111
              E+   S+ S GC T EKA+QLRIMT+K + F+DGMYHS +ASRLASDFSNT N
Sbjct: 61  NLAEKAAGSRFSPGCLTAEKARQLRIMTSKTDCFQDGMYHSGVASRLASDFSNTKN 114

[Close]

BLAST of IVF0016059 vs. ExPASy TrEMBL
Match: A0A5J5AVW4 (Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_030046 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 2.1e-15
Identity = 62/127 (48.82%), Postives = 72/127 (56.69%), Query Frame = 0


Query: 1   MTTNLLIFRPIRIQPSATSGSSSGHRKPIPHRKGRPQ---WRP-----DLPDYI-SDN-- 60
           M  NLL FRPI ++  AT    SGHRKP  HR+       W P       PDYI SDN  
Sbjct: 1   MAANLLPFRPIGVRACAT----SGHRKPDSHRRKSSSSNWWTPLFGWSSEPDYIDSDNKT 60

Query: 61  ---------MEPDLDSTEEVTESQLSVGCFTEEKAKQLRIMTTKANSFRDGMYHSAIASR 108
                     E + D   + + S+ + GCFTEEKAKQLR+MT +  SF D MYHSAIASR
Sbjct: 61  GTPAKADSKSEAESDPEMKSSRSRFAPGCFTEEKAKQLRMMTKETASFHDAMYHSAIASR 120

[Close]

BLAST of IVF0016059 vs. NCBI nr
Match: KAA0061584.1 (hypothetical protein E6C27_scaffold41G001490 [Cucumis melo var. makuwa])

HSP 1 Score: 207 bits (527), Expect = 3.66e-67
Identity = 107/110 (97.27%), Postives = 107/110 (97.27%), Query Frame = 0


Query: 1   MTTNLLIFRPIRIQPSATSGSSSGHRKPIPHRKGRPQWRPDLPDYISDNMEPDLDSTEEV 60
           MTTNLLIFRPIRIQ SATSGSSSGHRKPIPHRKGRPQWRPDLPDYISDNMEPDLDSTEEV
Sbjct: 1   MTTNLLIFRPIRIQQSATSGSSSGHRKPIPHRKGRPQWRPDLPDYISDNMEPDLDSTEEV 60

Query: 61  TESQLSVGCFTEEKAKQLRIMTTKANSFRDGMYHSAIASRLASDFSNTNN 110
           TESQLSVGCFTE KAKQLRIMTTKANSF DGMYHSAIASRLASDFSNTNN
Sbjct: 61  TESQLSVGCFTE-KAKQLRIMTTKANSFWDGMYHSAIASRLASDFSNTNN 109

[Close]

BLAST of IVF0016059 vs. NCBI nr
Match: TYJ97793.1 (hypothetical protein E5676_scaffold285G00030 [Cucumis melo var. makuwa])

HSP 1 Score: 146 bits (369), Expect = 2.11e-43
Identity = 71/73 (97.26%), Postives = 71/73 (97.26%), Query Frame = 0


Query: 1  MTTNLLIFRPIRIQPSATSGSSSGHRKPIPHRKGRPQWRPDLPDYISDNMEPDLDSTEEV 60
          MTTNLLIFRPIRIQPSATSGSSSGHRKPIPHRKGRPQWRPDLPDYISDNMEPDLDSTEEV
Sbjct: 1  MTTNLLIFRPIRIQPSATSGSSSGHRKPIPHRKGRPQWRPDLPDYISDNMEPDLDSTEEV 60

Query: 61 TESQLSVGCFTEE 73
          TESQLSVGCF  E
Sbjct: 61 TESQLSVGCFRGE 73

[Close]

BLAST of IVF0016059 vs. NCBI nr
Match: KGN60654.1 (hypothetical protein Csa_019215 [Cucumis sativus])

HSP 1 Score: 135 bits (340), Expect = 6.43e-39
Identity = 71/89 (79.78%), Postives = 76/89 (85.39%), Query Frame = 0


Query: 1  MTTNLLIFRPIRIQPSATSGSSSGHRKPI--PHRKGRPQWRPDLPDYISDNMEPDLDSTE 60
          MTTNLLIFRPIRIQPSATSGSSSGHRKPI  P R G PQWR D PDYI DN+EPD  ST+
Sbjct: 1  MTTNLLIFRPIRIQPSATSGSSSGHRKPISIPCRHGWPQWRLDPPDYIGDNVEPDSYSTK 60

Query: 61 EVTESQLSVGCFTEEKAKQLRIMTTKANS 87
          +VTESQLS GC TEEKAKQLRIMTT+ N+
Sbjct: 61 KVTESQLSAGCLTEEKAKQLRIMTTRYNT 89

[Close]

BLAST of IVF0016059 vs. NCBI nr
Match: XP_022998955.1 (uncharacterized protein LOC111493481 [Cucurbita maxima])

HSP 1 Score: 123 bits (309), Expect = 8.00e-34
Identity = 66/116 (56.90%), Postives = 84/116 (72.41%), Query Frame = 0


Query: 1   MTTNLLIFRPIRIQPSATSGSSSGHRKPIPHRKGRPQWRPDLPDYISDNMEPDLDS---- 60
           MTTNLL+FRPI I+PSA++G+  GHRKP P R  RP W+P  P+ I++  +PD +S    
Sbjct: 1   MTTNLLVFRPIGIRPSASAGT--GHRKPDPQRHYRPWWKPCPPNKITEGAQPDPNSDSNS 60

Query: 61  --TEEVTESQLSVGCFTEEKAKQLRIMTTKANSFRDGMYHSAIASRLASDFSNTNN 110
              E+   S+ S GC T EKA+QLRIMT+K + F+DGMYHS +ASRLASDFSNT N
Sbjct: 61  NLAEKAAGSRFSPGCLTAEKARQLRIMTSKTDCFQDGMYHSGVASRLASDFSNTKN 114

[Close]

BLAST of IVF0016059 vs. NCBI nr
Match: KAG7030406.1 (hypothetical protein SDJN02_08753, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 117 bits (292), Expect = 2.90e-31
Identity = 64/114 (56.14%), Postives = 82/114 (71.93%), Query Frame = 0


Query: 1   MTTNLLIFRPIRIQPSATSGSSSGHRKPIPHRKGRPQWRPDLPDYISDNMEP----DLDS 60
           MTTNLL+FRPI I+PSA++G+  GHRK  P R  RP W+P  P+ I++  +P    D +S
Sbjct: 1   MTTNLLVFRPIGIRPSASAGT--GHRKSDPQRHYRPWWKPCPPNKITEGAQPNPNSDSNS 60

Query: 61  TEEVTESQLSVGCFTEEKAKQLRIMTTKANSFRDGMYHSAIASRLASDFSNTNN 110
            E+   S+ S G  T EKA+QLRIMT+K + F+DGMYHS +ASRLASDFSNT N
Sbjct: 61  AEKAAGSRFSPGGLTAEKARQLRIMTSKTDCFQDGMYHSGVASRLASDFSNTKN 112

[Close]

BLAST of IVF0016059 vs. TAIR 10
Match: AT1G52720.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G15630.1); Has 61 Blast hits to 61 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 61; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 64.7 bits (156), Expect = 5.3e-11
Identity = 43/103 (41.75%), Postives = 55/103 (53.40%), Query Frame = 0


Query: 15  PSATSGSSSGHRKPIPHRKGRPQW------RPDLPDYIS-----DNMEPDLDSTEEVTES 74
           P+  + S SG   P  +RK    W       P  PDY++       + PD       +  
Sbjct: 11  PTIRASSGSGSLNPDQNRKKSAAWWAPLFGLPSDPDYLNIESSCSTVNPDKTDISG-SGQ 70

Query: 75  QLSVGCFTEEKAKQLRIMTTKANSFRDGMYHSAIASRLASDFS 107
           +   GCFTEEKAKQLR  T +A++F D MYHSAIASRLASD +
Sbjct: 71  KFRRGCFTEEKAKQLRRKTAEASTFHDVMYHSAIASRLASDIT 112

[Close]

BLAST of IVF0016059 vs. TAIR 10
Match: AT3G15630.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52720.1); Has 61 Blast hits to 61 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 61; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 62.4 bits (150), Expect = 2.6e-10
Identity = 43/95 (45.26%), Postives = 54/95 (56.84%), Query Frame = 0


Query: 17  ATSGSSSGHRKPIPHRKGRPQWRP-----DLPDYISD--NMEPDLDSTEEVTESQLSVGC 76
           A+S S    +KP+        W P       PDY++   N+E DLD  E+    +    C
Sbjct: 15  ASSESDPARKKPV---SSVSWWAPLFGMSSEPDYVNKTVNLESDLDKAEK----RSLRCC 74

Query: 77  FTEEKAKQLRIMTTKANSFRDGMYHSAIASRLASD 105
            TEEKAKQLR  T +A++F D MYHSAIASRLASD
Sbjct: 75  LTEEKAKQLRRKTAEASTFHDVMYHSAIASRLASD 102

The following BLAST results are available for this feature:

BLAST of IVF0016059 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0016059 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V2V1	1.2e-50	97.27	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3BEV3	4.2e-32	97.26	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0LI01	1.3e-28	79.78	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G006010 PE=4 SV=1	[more]
A0A6J1KDY2	2.3e-25	56.90	uncharacterized protein LOC111493481 OS=Cucurbita maxima OX=3661 GN=LOC111493481...	[more]
A0A5J5AVW4	2.1e-15	48.82	Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_030046 PE=4 SV=1	[more]

BLAST of IVF0016059 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0061584.1	3.66e-67	97.27	hypothetical protein E6C27_scaffold41G001490 [Cucumis melo var. makuwa]	[more]
TYJ97793.1	2.11e-43	97.26	hypothetical protein E5676_scaffold285G00030 [Cucumis melo var. makuwa]	[more]
KGN60654.1	6.43e-39	79.78	hypothetical protein Csa_019215 [Cucumis sativus]	[more]
XP_022998955.1	8.00e-34	56.90	uncharacterized protein LOC111493481 [Cucurbita maxima]	[more]
KAG7030406.1	2.90e-31	56.14	hypothetical protein SDJN02_08753, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of IVF0016059 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G52720.1	5.3e-11	41.75	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G15630.1	2.6e-10	45.26	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 12..61
None	No IPR available	PANTHER	PTHR34198	OS01G0175100 PROTEIN	coord: 1..108
None	No IPR available	PANTHER	PTHR34198:SF18	PROTEIN, PUTATIVE-RELATED	coord: 1..108

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0016059.1	IVF0016059.1	mRNA