IVF0015993 (gene) Melon (IVF77) v1

Overview
NameIVF0015993
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Locationchr07: 19361575 .. 19362779 (+)
RNA-Seq ExpressionIVF0015993
SyntenyIVF0015993
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGCCTTTATCAAAACTTTCATTTTCATCTTCCTCATTATCTTCACTTTCCCTGATTCAGGTATACTAAAGATTAGATATTCGAGTGCATTAACCTGATTTTTCTATCATTTTTTTTTAATTTTTTTTATTTGTTTGAAAAAAGTACCCCTTCATAAAAATTAGGGTTTTGTAAAATTTTGTTGTCCTAGCTTTATATCCTCTTCAATTGAGATCATCTCACAAATTACTTTAGGGTTTAGATCTCTAGTCGGGTCAGTGTTCAAAATGGAAATTAGGGTTTCCATAATTTTGTAATTTATCTTTCTCCCTTTTTGTAGGGGACGCTGGTGACCTGAGCTTGAAGAAGGGTTTGAAGCTATCAAATCCTTGTGGGCAGGTGAGAGAAACCCTAATCTGGATTCTTTTTGTAATTAATTTGAACTTAGATTCTATTATATCTACTCAAAAATAAAACTTCAAGCCAACTTAATGGGCATTCATTTTTTTCGGGGTTCAAATCTTCCTATCTCAAGTTGTACTTGAAAAGACCTTTTAAAAAAAACAATGAAACTTCAAATCTTGAAACCTAATTGTCGAATATTGAGATGCTATCTTCAACATTTTTATGTTTGGAAAAATCCTAGTTATAAGCTTCTATTATGAGCTTAGCTAGGTTTCGACTTCAATTCTCCACCTTGTTTGTACTTAGAAATGTTTTAAGAAAATTAAGAGAATTAAGCACTTGGCCTTGGAAAAAATCTGTATAAATTAAATACTCTTGTTTTAAAGAAAATTTGTAACTTATCAACATCCATGGATTTGTCTAACAAATTAACCCTAGATGAGCAAATATGAGTTTGGCTTTAAAACCAAACCTTTTCACTCCTAACACATTCTTAAAGCTATCGATTTGCATTTGAAATAAACTATATTTGACGTGATCAAGAAATAAGAATATTAACATCCACATCGAGATAACTCGAATTTAGCAATAAATCAAGAAACATATCATGCATCCATTTATATCCATGCATGAATGAACAAACCAGGTATAAGATCATTTATAATTGACCATACTCTTGAAATTACAGATGATAGTTGAAAAGAACAACAGAGTGACAAGAAAGCTTTTGGGAGCAGAAGTATTGCTAGACTATGCAAGCCCAGATCATAATTCAAGACATGAGCCAAGGTTTGGAAGCCCTGGAGGTAGAGCTTAA

mRNA sequence

ATGGCTGCCTTTATCAAAACTTTCATTTTCATCTTCCTCATTATCTTCACTTTCCCTGATTCAGGGGACGCTGGTGACCTGAGCTTGAAGAAGGGTTTGAAGCTATCAAATCCTTGTGGGCAGATGATAGTTGAAAAGAACAACAGAGTGACAAGAAAGCTTTTGGGAGCAGAAGTATTGCTAGACTATGCAAGCCCAGATCATAATTCAAGACATGAGCCAAGGTTTGGAAGCCCTGGAGGTAGAGCTTAA

Coding sequence (CDS)

ATGGCTGCCTTTATCAAAACTTTCATTTTCATCTTCCTCATTATCTTCACTTTCCCTGATTCAGGGGACGCTGGTGACCTGAGCTTGAAGAAGGGTTTGAAGCTATCAAATCCTTGTGGGCAGATGATAGTTGAAAAGAACAACAGAGTGACAAGAAAGCTTTTGGGAGCAGAAGTATTGCTAGACTATGCAAGCCCAGATCATAATTCAAGACATGAGCCAAGGTTTGGAAGCCCTGGAGGTAGAGCTTAA

Protein sequence

MAAFIKTFIFIFLIIFTFPDSGDAGDLSLKKGLKLSNPCGQMIVEKNNRVTRKLLGAEVLLDYASPDHNSRHEPRFGSPGGRA
Homology
[Close]
BLAST of IVF0015993 vs. ExPASy TrEMBL
Match: A0A5D3D203 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G003180 PE=4 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 6.0e-39
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0 

Query: 1  MAAFIKTFIFIFLIIFTFPDSGDAGDLSLKKGLKLSNPCGQMIVEKNNRVTRKLLGAEVL 60
          MAAFIKTFIFIFLIIFTFPDSGDAGDLSLKKGLKLSNPCGQMIVEKNNRVTRKLLGAEVL
Sbjct: 1  MAAFIKTFIFIFLIIFTFPDSGDAGDLSLKKGLKLSNPCGQMIVEKNNRVTRKLLGAEVL 60

Query: 61 LDYASPDHNSRHEPRFGSPGGRA 84
          LDYASPDHNSRHEPRFGSPGGRA
Sbjct: 61 LDYASPDHNSRHEPRFGSPGGRA 83

[Close]
BLAST of IVF0015993 vs. ExPASy TrEMBL
Match: A0A0A0KYH7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G055320 PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 7.6e-34
Identity = 73/83 (87.95%), Postives = 78/83 (93.98%), Query Frame = 0 

Query: 1  MAAFIKTFIFIFLIIFTFPDSGDAGDLSLKKGLKLSNPCGQMIVEKNNRVTRKLLGAEVL 60
          MAAFIKTFIFIFLIIF FP+SGDA DLSLKKGLKLSNPCGQ+IVEKNN+VTRKLLGAE  
Sbjct: 1  MAAFIKTFIFIFLIIFMFPNSGDAHDLSLKKGLKLSNPCGQLIVEKNNKVTRKLLGAEAF 60

Query: 61 LDYASPDHNSRHEPRFGSPGGRA 84
           DYASPDHN+RHEPRFG+PGGRA
Sbjct: 61 ADYASPDHNTRHEPRFGNPGGRA 83

[Close]
BLAST of IVF0015993 vs. ExPASy TrEMBL
Match: A0A5A7TNM7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G003170 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 7.9e-07
Identity = 31/60 (51.67%), Postives = 42/60 (70.00%), Query Frame = 0 

Query: 27 LSLKKGL--KLSNPCGQMIVEKNNRVTRKLLGAE--VLLDYASPDHNSRHEPRFGSPGGR 83
          +SLK+GL  + +NPCGQM + +  +V RK+LG E  +L+DY  P  N  HEPR G+PGGR
Sbjct: 1  MSLKEGLNEEHNNPCGQMRIGRKGKVMRKILGNEEGILMDYNEPSANPSHEPRRGTPGGR 60

[Close]
BLAST of IVF0015993 vs. ExPASy TrEMBL
Match: A0A5J5A8H2 (Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_007784 PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 8.2e-04
Identity = 28/74 (37.84%), Postives = 43/74 (58.11%), Query Frame = 0 

Query: 1  MAAFIKTFIFIFLIIFTFPDSGDAGDLSLKKGLKLSNPCGQMIVEKNNRVTRKLLGAEVL 60
          M   +KTFI I L++F+ P SG       K G+KL+NP  ++I++      RKL+G   +
Sbjct: 1  MPPMVKTFILIILLLFSCPSSGRPN--GTKDGVKLTNPHNEVIIQMKE---RKLIGIHTM 60

Query: 61 LDYASPDHNSRHEP 75
          +DY+S   N  H+P
Sbjct: 61 MDYSSAIANPVHDP 69

[Close]
BLAST of IVF0015993 vs. NCBI nr
Match: TYK16509.1 (hypothetical protein E5676_scaffold21G003180 [Cucumis melo var. makuwa])

HSP 1 Score: 166 bits (419), Expect = 1.60e-51
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0 

Query: 1  MAAFIKTFIFIFLIIFTFPDSGDAGDLSLKKGLKLSNPCGQMIVEKNNRVTRKLLGAEVL 60
          MAAFIKTFIFIFLIIFTFPDSGDAGDLSLKKGLKLSNPCGQMIVEKNNRVTRKLLGAEVL
Sbjct: 1  MAAFIKTFIFIFLIIFTFPDSGDAGDLSLKKGLKLSNPCGQMIVEKNNRVTRKLLGAEVL 60

Query: 61 LDYASPDHNSRHEPRFGSPGGRA 83
          LDYASPDHNSRHEPRFGSPGGRA
Sbjct: 61 LDYASPDHNSRHEPRFGSPGGRA 83

[Close]
BLAST of IVF0015993 vs. NCBI nr
Match: KGN53437.1 (hypothetical protein Csa_015314 [Cucumis sativus])

HSP 1 Score: 149 bits (375), Expect = 8.29e-45
Identity = 73/83 (87.95%), Postives = 78/83 (93.98%), Query Frame = 0 

Query: 1  MAAFIKTFIFIFLIIFTFPDSGDAGDLSLKKGLKLSNPCGQMIVEKNNRVTRKLLGAEVL 60
          MAAFIKTFIFIFLIIF FP+SGDA DLSLKKGLKLSNPCGQ+IVEKNN+VTRKLLGAE  
Sbjct: 1  MAAFIKTFIFIFLIIFMFPNSGDAHDLSLKKGLKLSNPCGQLIVEKNNKVTRKLLGAEAF 60

Query: 61 LDYASPDHNSRHEPRFGSPGGRA 83
           DYASPDHN+RHEPRFG+PGGRA
Sbjct: 61 ADYASPDHNTRHEPRFGNPGGRA 83

[Close]
BLAST of IVF0015993 vs. NCBI nr
Match: KAG6600409.1 (hypothetical protein SDJN03_05642, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 108 bits (270), Expect = 8.33e-29
Identity = 60/83 (72.29%), Postives = 66/83 (79.52%), Query Frame = 0 

Query: 1  MAAFIKTFIFIFLIIFTFPDSGDAGDLSLKKGLKLSNPCGQMIVEKNNRVTRKLLGAEVL 60
          MAAF KTFIFIFL+ F  P+SGDA  L LK+GLKL NPCGQ+I+EK     RKLLGAE L
Sbjct: 4  MAAF-KTFIFIFLV-FICPNSGDADGLRLKEGLKLPNPCGQVIIEKKG--VRKLLGAEEL 63

Query: 61 LDYASPDHNSRHEPRFGSPGGRA 83
          LDYASP HN RHEPR G+PGGRA
Sbjct: 64 LDYASPSHNPRHEPRVGNPGGRA 82

[Close]
BLAST of IVF0015993 vs. NCBI nr
Match: KAG6577123.1 (hypothetical protein SDJN03_24697, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 107 bits (267), Expect = 2.46e-28
Identity = 59/83 (71.08%), Postives = 67/83 (80.72%), Query Frame = 0 

Query: 1  MAAFIKTFIFIFLIIFTFPDSGDAGDLSLKKGLKLSNPCGQMIVEKNNRVTRKLLGAEVL 60
          MAAF  TF FIFL+ FT+P+SG A  L+LK+GLKL NPCGQ+ VEKN +V RKLLGAE  
Sbjct: 4  MAAF-NTFFFIFLL-FTYPNSGVADGLNLKEGLKLPNPCGQVRVEKN-KVARKLLGAEEF 63

Query: 61 LDYASPDHNSRHEPRFGSPGGRA 83
           DYASP+HN RHEPR GSPGGRA
Sbjct: 64 SDYASPEHNRRHEPRIGSPGGRA 83

[Close]
BLAST of IVF0015993 vs. NCBI nr
Match: KAA0044962.1 (hypothetical protein E6C27_scaffold74G002680 [Cucumis melo var. makuwa] >TYK16508.1 hypothetical protein E5676_scaffold21G003170 [Cucumis melo var. makuwa])

HSP 1 Score: 61.6 bits (148), Expect = 1.81e-10
Identity = 31/60 (51.67%), Postives = 42/60 (70.00%), Query Frame = 0 

Query: 27 LSLKKGL--KLSNPCGQMIVEKNNRVTRKLLGAE--VLLDYASPDHNSRHEPRFGSPGGR 82
          +SLK+GL  + +NPCGQM + +  +V RK+LG E  +L+DY  P  N  HEPR G+PGGR
Sbjct: 1  MSLKEGLNEEHNNPCGQMRIGRKGKVMRKILGNEEGILMDYNEPSANPSHEPRRGTPGGR 60

The following BLAST results are available for this feature:
BLAST of IVF0015993 vs.
Match NameE-valueIdentityDescription
BLAST of IVF0015993 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3D2036.0e-39100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0KYH77.6e-3487.95Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G055320 PE=4 SV=1[more]
A0A5A7TNM77.9e-0751.67Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5J5A8H28.2e-0437.84Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_007784 PE=4 SV=1[more]
BLAST of IVF0015993 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK16509.11.60e-51100.00hypothetical protein E5676_scaffold21G003180 [Cucumis melo var. makuwa][more]
KGN53437.18.29e-4587.95hypothetical protein Csa_015314 [Cucumis sativus][more]
KAG6600409.18.33e-2972.29hypothetical protein SDJN03_05642, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6577123.12.46e-2871.08hypothetical protein SDJN03_24697, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAA0044962.11.81e-1051.67hypothetical protein E6C27_scaffold74G002680 [Cucumis melo var. makuwa] >TYK1650... [more]
BLAST of IVF0015993 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0015993.1IVF0015993.1mRNA