IVF0015982 (gene) Melon (IVF77) v1

Overview
NameIVF0015982
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionAAA domain-containing protein
Locationchr06: 17330732 .. 17337237 (-)
RNA-Seq ExpressionIVF0015982
SyntenyIVF0015982
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGCATTCTGTGCAGACAAAAATTCGTCCCCGGGCGCAAAAGGGAGACTCGGTATCTTGAAAATTCATGCAAGCAAAGTGAAGATGTCGCACTCTGTTGATCTAAGCACCACGAAATTTACCTGGTTTGTTCTTTTTTTGCTTTTTATTATTGATCTGTAACTTTGTTTCTTGAAATGATATATCAAATGACCAGGTTGGTCGGGAGCGAAGTTGGCTCAACTTGTCCAGGAATCTGCTCTTGTTGCTGTCAGGAAAGGCATGAATCTATTGTCCAGTCAGACATGGATGATGCAGTTGACTGGCATAGAGTTAGGTCATCAGGGGGACAATGCCGTAGAGCTACCACAGAAATGGGTGTTGCTATAACTTCACATTTGCTTAGGAGATATGAGAGTGCAAAAGTTGAATGCTGCGATCGCATTTCAATCATTCCTCGTGGTCAAGTCTGTTCAAATGTGCTAGGCCACCAATCCTATTTACATACCATAGGAAAAATAAGAAGAAACATGAAGCCAACGAAAGAGAGACAAGTGGCAAGAAGGATCATGGCCATGAGACCAACCCAGAGGTAACACGTGTTGAAGGGGAGGAAAGCAAGGAGGATGGGGGACCAGAAAGTGGGACCCACAGTTAGTTAGTCGTGGGCAATAAAAAGGGGACAGGAGGGCAGAGAAGGGTACGAATGTTTTGATGCGTTAGTGCAGGAGCAGGCACCTCCAGAAAGGGGAGGGTGGCACCAGGTTACCGTTTCTTTTTGTGTGCTTAAGTAGCCGTAGATTGTAGGAGAGGAGGAAGGCATTATTCCGAGTGTTCTTGTTTACGTCTGTGTTCTTGGTTATTACATACTGTGTGTGTTTTACTTTATCAGCTGGGTTGTTTTGTCAATCTTAGAAAGGCTATTGTCATTAGTCTTTGAAGTGTTTTATTTCTTGATTTTGTGCTGTACTCTGTTCTTCTGGAAAGTAAAAGAAAGGAACGAGGAAGTGTCTTAACATTTTGGTATCAGAGCTTCATACCTGGGCAGATCATGTCAACGACGAAGGCAACGGAGGAACGGTTGGAGGCGGTTGAGATGGAAATGAAAAGGCTGCCGATGATCGAGGAGAATATAGCATTACTAGCCAAAAGCATCACGGAAATGAACTCTCAAATTGATAAGCAGGCACAGCAGCAACAAGTGATACTGAAGTATATTGAAGGAATCGTTAAGGATGATTCTCCTGTACGAAGGACCGAAGAAGGGTCCACGAGCAAGGTCACCATGGCCGAAGCAATATATCCAGCGACTGTTGAAGAGCCGAAGTTAGAAGTAAAAACAGAGGAGGAGCGACCCGTGGATCGGAGCAAATTTAAGAAAGTTGAAATGCCAGTCTTCGACGGGACAGACCCCGACTCGTGGCTGTTCCGGGCCGACCGATACTTCAAGATACATAACTTGACGGATTCAGAGAGACTTACCGTGGCAGTAATCAGCTTCGATGGGCCGGCGTTGGACTGGTATCGATCACAAGAAGAGAGGGAAGCTTTCACCGGTTGGGATGACTTGAAGCTAAAGATGCTGGTGAGGTTCCGCGCAACTAGGGAAGGTACATTGGTGGGCCGGTTCTTAACGATCAAACAGGAGTCCACTGTCGAGGAGTACCGGAATCGTTTCGATAAACTATTGGCACCGGTGGCTTCCCTGCCGACGGTGGTGCTAGAGGAAACATTCATGAATGGGTTAAATCCATGGTTGAAGTTGGAGGTAGAAACACTGGAGCCCATTGGGCTGGCCCAAATGATGAAGTTGGCCTTGAAGATAGAAAATAGAGAGCTGGTCCGAAGGGAATGCGGGCTGATCAGCGCCTACGACAGCAAAATGGGCCATAAACAACAGCAGGCTAAGAGCCCCATCACAGCAGCCACGAAGGAAGGAACGGTCAGTGGGAGTTGGCCAATGAGAACGATAACACTGAGAGAGGTGGGTACGGGAGACAACCGTCGGGAAGGGCCCATGAAACGATTATCTGACGCCGAGTTCCAAGCTCGAAGGGAAAAAGGGTTATGTTTTCGCTGTGGGGAGAAGTATTTCGCCGGACATCGGTGCAAGTCGAAGGAGCATAAGGAGCTTCGAATGCTGGTAGTCAAAGAAGGAGGGGAGGAACTGGAAATTGTGGAGGAAGAGTTTTTCGATGCCGAAACTGAGATGAAACCAGCTGAAGTACCGAACGTGGAAAATTTAAACATAGAACTGTCGCTCAACTCCGTGGTGGGACTGAACAATCCGGGAACCATGAAAGTAAAAGGGAAGGTGGGAGAAGAAGAAGTGGTGATCTTGATCGATTGTGGGGCGACCCACAACTTCATCGCAGAAGACTTGGTGACCAGGTTAGTATTGACATTGCAGGAGACTCCAAACTATGGAGTAATCCTGGGCTCAGGAACGGCAGTAAAAGGTAAGGGGATGTGCCGAAGTGTTGAAGTGCAATTGGACGGCTGGAAGGTAACTGATAGCTTCCTACCACTGCAGTTGGGGGGAGTTGACATGATCCTAGGAATGCAGTGGCTTCATTCTCTTGGGGTGACCGAAGTCGACTGGAAGAGGTTAGTACTTACTTTTCATCACCAGGGGAGGAAGGTTGTGATACGAGGGGATCCAAGCCTGATTAAGACAAGGGTGAGTTTGAAGAATCTAGTGAAAACGTGGGGGGCGGACGATCAGGGATTCCTGGTGGAATGCCGAACATTAGAATGCGGGAAGTTGGAAGATGAACAGGATCAGGGGCGGGGAAAGGTCGACGCTGAACCCATAGCGACACTACTCCAGCAATTCGCCCGCGTGTTTGAATGGCCTGCGACCCTTCCACCCCAGCGCAGCATTGAACACCACATATACCTGAAGAGTGGGACTGACCCAGTGAACGTTCGGCCATATCGATACGCGCATCATCAGAAGGAGGAAATGGAGAGATTGGTGGATGAGATGCTATCTTCAGGGATCATACGACCGAGTAAAAGCCCATACTCTAGCCCTGTGCTGTTAGTAAGGAAGAAAGACGGGAGTTGGAGGTTCTGCGTAGATTACCGAGCTTTGAACAATGTCACGATACCAGACAAATTTCCCATACCAGTGATAGAAGAATTATTTGACGAACTAAAGGGGGCCAGCGTATTCTCCAAGTTAGACCTCAAAGCCGGATATCACCAAATTAGGATGTGCCCTGAAGATATCGAAAAGACCGCGTTCAGAACTCACGAGGGGCACTATGAGTTCTTGGTAATGCCGTTCGGATTAACAAATGCCCCCTCTACATTCCAGGCACTGATGAACCAAGTGTTCAAGCCATACTTAAGAAGGTTTGTGCTGGTATTTTTTGATGATATCCTAATCTACAGCCAAGGGATGGACGAACATGTTCAGCACTTAGAAGTGGTTTTAGGACTACTGCAAGACCGGGAGTTATATGTGAATATGGAAAAGTGCAGTTTCGCCAAACCACGGATTAGTTACTTGGGACACTTCATCTCGGAACAGGGCTTGGAAGCAGATCCAGAAAAGATAAGGGCAGTGAGTGACTGGCCAACCCCAACCAATGTGAGAGAGGTTAGAGGCTTCCTTGGCCTGACTGGCTATTATAGGCGTTTCGTTAAGAACTATGGGGCCATAGCCGCACCACTCACCCAACTACTTAAGAAAGGAGCGTACAAATGGGATGCAGAAGCCGAGGGCGCTTTTAACAAACTGAAAAAGGCTATGATGACTCTCCCTGTGCTCACCATGCCGGATTTCAACCTGCCTTTCGAAATTAAATCAGATGCTTCGGGAGTGGGAGTGGGGGCTGTGCTGACTCAATGCCGGAAACCAGTGGCTTATTTCAGCAAGACCTTAAGTATGCGGGACAGAGCACGACCTGTATACGAAAGAGAATTACTTTCTGTAGTGCTTGCAGTCCAAAGATGGAGACCTTACCTACTAGGGAGGAAATTCACGGTGAAAACAGACCAAAGGTCGCTTAAGTTCTTATTGGAACAACGGGTTGTGCAGCCTCAATATCAAAAATGGGTAGCGAAGCTCCTGGGGTACTCATTTGAAGTGGTTTACCAACCAGGACTGGAGAATAAGGCGGCTGACGCATTATCCAGGATATCCCCAGCAGTACACTTGAGTCAAATTACAGCTCCCCCGATGATAGACATGGAAATTATTAAGGAAGAAACAAGGCTTGACCCTGCACTGCGAGAAATCACCCGAATACTAGAAGAAGGGATGGAGATACCCCATTACACCCTGCAGCAAGGGGTATTGAAGTTTAAGGGCCGTTTGGTGATTCCAAGCAAGTTTACGTTGCTACCTACGATACTCCACACATACCACGACTCTGTGTTTGGGGGGCACTCAGGATTCTTGAGAACTTATAAACAGTTGACCGGAGAAATCTATTGGAAGGGAATGAAGAAAGACATCATGCGGTACTGTGAAGAATGTGCAATCTGCCAGCGTAATAAGTCATCGGCTCTATCTCCAGCTGGGTTACTGATGCCCTTAGAGATTCCAGACGCCATATGGAGTGATATATCCATGGATTTCATAGAAGGACTGCCAAAATCCAAGGGATGGGATGTGATATTCGTGGTGGTAGATAGGCTGAGTAAATATGGGCATTTCTGTTGCTTAAGCACCCGTTTTCGGCCAAGATGGTAGCTGAAACATTTGTAAAGGAGGTGGTCCGACTTCATGGATACCCAAGATCGATAGTGTCTGACAGGGACAAGGTTTTTTTAAGCCATTTCTGGAAGGAACTCTTCCGCTTGGCAGGAACTAAGTTGAACCGGAGCTCTTCCTATCACCCCCAATCAGATGGCCAAACCGAGGTGGTAAATAAGAGTATTGAAACCTATCTAAGGTGTTTTTGTGGGGAAAAACCGAAAGAGTGGAGCCAATGGTTACATTGGGCAGAATATTGGTATAATACAACCTATCATAGTTCCATTGGAATTACACCTTTTCAAGCTGTGTATGGACGCCTTCCCCTCCTTTGATTTACTATGGGGATATGGAGACACCTAACTCAACACTAGACCAGCAGCTGAAAGACAGAGATATAACATTGGGAGCCCTGAAGGAACATTTGAAACTAGCCCAAGAAAGGATGAAGAAACACGCTGACAATAAGAGAAGAGAAGTCGAGTTCCAGGAAGGGGATCTGGTATTCCTCAAACTGCGGCCTTACCGGCAGACCTCCCTCAGAAAGAAGAGAAATGAAAAGCTATCACCTAAGTATTTCGGGCCTTATCGAGTCTTAGAAAGGATCGGAAAGGTAGCATATAAACTAGAACTCCCCGCAGCTGCTGCTATTCACCCCGTGTTCCATGTATCACAATTGAAGAAGGCTGTAGGAAGAGGAGAGACTGCACAACCACTGAACCCGTACATGAATGCAAACCATGAATGGATCACACGACCGGAGGAGGTATATAGTTATCGCAAGAATCCAGTAACGAAGGAGTGGGAAGCCCTGATCAGTTGGAAGGGATTACCCCCACACGAGGCAACATGGGAAAGCTGCAATGACATGAAATATCAGTTTCCAGATTTTCACCTTGAGGACAAGGTGGATTTGGAAGAGGAGAGTGATGCTAGGCCACCAATCCTATTTACATACCATAGGAAAAATAAGAAGAAACATGAAGCCAACGAAAGAGAGACAAGTGGCAAGAAGGATCATGGCCATGAGACCAACCCAAAGGTAACACGTGTTGAAGGGGAGGAAAGCAAGGAGGATGGGGGACCAGAAAGTGGGACCCACAGTTAGTTAGTCGTGGGCAATAAAAAGGGGACAGGAGGGCAGAGAAGGGTACGAATGTTTTGATGCGTTAGTGCAGGAGCAGGCACCTCCAGAAAGGGGAGGGTGGCACCAGGTTACCGTTTCTTTTTGTGTGCTTAAGTAGCCGTAGATTGTAGGAGAGGAGGAAGGCATTATTCCGAGTGTTCTTGTTTACGTCTGTGTTCTTGGTTATTACATACTGTGTGTGTTTTACTTTATCAGCTGGGTTGTTTTGTCAATCTTAGAAAGGCTATTGTCATTAGTCTTTGAAGTGTTTTATTTCTTGATTTTGTGCTGTACTCTGTTCTTCTGGAAAGTAAAAGAAAGGAACGAGGAAGTGTCTTAACAAAATGCTTCCTTATTTGTTTGTTGTGATAAAATTTTCTTTACTTGCATCGGTGTCAAACTGACATGCTCGGCTTAAATAATCCAACCGTGTCTAAAAGCAGTCATGGTTTGAGTCTTTTGTTTTACAGTTCGTTTTGACCTTGAACCTTTTTCTGGAACTGAATGGCAGGTTCTCATCTTCCATGAGGAAATAATTGGAGAAGAAATCGACTTCATTCTAGACAATTACCCTCCACAAACACCTATTAGTGTTCTTTTTCAAGAGGAAAACCCTGGAAGACTACCTAGCCATGGATCAGTGGAGCCTGGGAAGGATGCAAAACCTGTATGTGAAATTGGAAACTGGTGA

mRNA sequence

ATGGGGCATTCTGTGCAGACAAAAATTCGTCCCCGGGCGCAAAAGGGAGACTCGGAAAGGCATGAATCTATTGTCCAGTCAGACATGGATGATGCAGTTGACTGGCATAGAGTTAGGTCATCAGGGGGACAATGCCGTAGAGCTACCACAGAAATGGGTGTTGCTATAACTTCACATTTGCTTAGGAGATATGAGAGTGCAAAAGTTGAATGCTGCGATCGCATTTCAATCATTCCTCGTGGTCAAGTTCTCATCTTCCATGAGGAAATAATTGGAGAAGAAATCGACTTCATTCTAGACAATTACCCTCCACAAACACCTATTAGTGTTCTTTTTCAAGAGGAAAACCCTGGAAGACTACCTAGCCATGGATCAGTGGAGCCTGGGAAGGATGCAAAACCTGTATGTGAAATTGGAAACTGGTGA

Coding sequence (CDS)

ATGGGGCATTCTGTGCAGACAAAAATTCGTCCCCGGGCGCAAAAGGGAGACTCGGAAAGGCATGAATCTATTGTCCAGTCAGACATGGATGATGCAGTTGACTGGCATAGAGTTAGGTCATCAGGGGGACAATGCCGTAGAGCTACCACAGAAATGGGTGTTGCTATAACTTCACATTTGCTTAGGAGATATGAGAGTGCAAAAGTTGAATGCTGCGATCGCATTTCAATCATTCCTCGTGGTCAAGTTCTCATCTTCCATGAGGAAATAATTGGAGAAGAAATCGACTTCATTCTAGACAATTACCCTCCACAAACACCTATTAGTGTTCTTTTTCAAGAGGAAAACCCTGGAAGACTACCTAGCCATGGATCAGTGGAGCCTGGGAAGGATGCAAAACCTGTATGTGAAATTGGAAACTGGTGA

Protein sequence

MGHSVQTKIRPRAQKGDSERHESIVQSDMDDAVDWHRVRSSGGQCRRATTEMGVAITSHLLRRYESAKVECCDRISIIPRGQVLIFHEEIIGEEIDFILDNYPPQTPISVLFQEENPGRLPSHGSVEPGKDAKPVCEIGNW
Homology
[Close]
BLAST of IVF0015982 vs. ExPASy Swiss-Prot
Match: O22993 (Probable inactive ATP-dependent zinc metalloprotease FTSHI 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FTSHI1 PE=1 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 7.3e-18
Identity = 50/78 (64.10%), Postives = 57/78 (73.08%), Query Frame = 0 

Query: 21  HESIVQSDMDDAVDWHRVRSS--------GGQCRRATTEMGVAITSHLLRRYESAKVECC 80
           H SI+QSDMDDAVD   V  +         GQCRRATTE+GVAITSHLL RYE+AK+E C
Sbjct: 663 HNSILQSDMDDAVDRLTVGPTRIGLELGHQGQCRRATTEVGVAITSHLLLRYENAKIERC 722

Query: 81  DRISIIPRGQVL---IFH 88
           DR+SIIPRGQ L   +FH
Sbjct: 723 DRVSIIPRGQTLSQVVFH 740


HSP 2 Score: 60.5 bits (145), Expect = 1.8e-08
Identity = 26/49 (53.06%), Postives = 38/49 (77.55%), Query Frame = 0 

Query: 73  DRISIIPRGQVLIFHEEIIGEEIDFILDNYPPQTPISVLFQEENPGRLP 122
           ++ +++   +VL+  +EI GE IDFILD+YPPQTP++ L QE+NPG LP
Sbjct: 872 NQTALLKTVKVLLNQKEISGEAIDFILDHYPPQTPLNSLLQEQNPGSLP 920

[Close]
BLAST of IVF0015982 vs. ExPASy TrEMBL
Match: A0A5A7UX59 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G004050 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 1.3e-28
Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 0 

Query: 19  ERHESIVQSDMDDAVDWHRVRSSGGQCRRATTEMGVAITSHLLRRYESAKVECCDRISII 78
           ERHESIVQSDMDDAVDWHRVRSSGGQCRRATTEMGVAITSHLLRRYESAKVECCDRISII
Sbjct: 352 ERHESIVQSDMDDAVDWHRVRSSGGQCRRATTEMGVAITSHLLRRYESAKVECCDRISII 411

Query: 79  PRGQV 84
           PRGQV
Sbjct: 412 PRGQV 416

[Close]
BLAST of IVF0015982 vs. ExPASy TrEMBL
Match: A0A5A7UX59 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G004050 PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 3.4e-26
Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 0 

Query: 82   QVLIFHEEIIGEEIDFILDNYPPQTPISVLFQEENPGRLPSHGSVEPGKDAKPVCEIGN 141
            QVLIFHEEIIGEEIDFILDNYPPQTPISVLFQEENPGRLPSHGSVEPGKDAKPVCEIGN
Sbjct: 2071 QVLIFHEEIIGEEIDFILDNYPPQTPISVLFQEENPGRLPSHGSVEPGKDAKPVCEIGN 2129


HSP 2 Score: 136.0 bits (341), Expect = 1.3e-28
Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 0 

Query: 19  ERHESIVQSDMDDAVDWHRVRSSGGQCRRATTEMGVAITSHLLRRYESAKVECCDRISII 78
           ERHESIVQSDMDDAVDWHRVRSSGGQCRRATTEMGVAITSHLLRRYESAKVECCDRISII
Sbjct: 341 ERHESIVQSDMDDAVDWHRVRSSGGQCRRATTEMGVAITSHLLRRYESAKVECCDRISII 400

Query: 79  PRGQV 84
           PRGQV
Sbjct: 401 PRGQV 405

[Close]
BLAST of IVF0015982 vs. ExPASy TrEMBL
Match: A0A5D3BRA0 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold420G00550 PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 3.4e-26
Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 0 

Query: 82   QVLIFHEEIIGEEIDFILDNYPPQTPISVLFQEENPGRLPSHGSVEPGKDAKPVCEIGN 141
            QVLIFHEEIIGEEIDFILDNYPPQTPISVLFQEENPGRLPSHGSVEPGKDAKPVCEIGN
Sbjct: 2060 QVLIFHEEIIGEEIDFILDNYPPQTPISVLFQEENPGRLPSHGSVEPGKDAKPVCEIGN 2118


HSP 2 Score: 104.8 bits (260), Expect = 3.1e-19
Identity = 87/258 (33.72%), Postives = 91/258 (35.27%), Query Frame = 0 

Query: 21  HESIVQSDMDDAVDWHRV--RSSG------GQCRRATTEMGVAITSHLLRRYESAKVECC 80
           HESI QSDMDDA+D   V  R  G      GQCRRATTE+GVAITSHLLRRYESA+VECC
Sbjct: 674 HESIDQSDMDDAIDRLTVGPRRIGIELGHQGQCRRATTEIGVAITSHLLRRYESARVECC 733

Query: 81  DRISIIPRGQ-------------------------------------------------- 122
           DRISIIPRGQ                                                  
Sbjct: 734 DRISIIPRGQTLSQVVFRRLSEESYIFERRPQLLHRLQVFLGARAAEEVIYGRDTSKASV 793

[Close]
BLAST of IVF0015982 vs. ExPASy TrEMBL
Match: A0A1S4DYV7 (probable inactive ATP-dependent zinc metalloprotease FTSHI 1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC107991187 PE=3 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 3.1e-19
Identity = 87/258 (33.72%), Postives = 91/258 (35.27%), Query Frame = 0 

Query: 21  HESIVQSDMDDAVDWHRV--RSSG------GQCRRATTEMGVAITSHLLRRYESAKVECC 80
           HESI QSDMDDA+D   V  R  G      GQCRRATTE+GVAITSHLLRRYESA+VECC
Sbjct: 577 HESIDQSDMDDAIDRLTVGPRRIGIELGHQGQCRRATTEIGVAITSHLLRRYESARVECC 636

Query: 81  DRISIIPRGQ-------------------------------------------------- 122
           DRISIIPRGQ                                                  
Sbjct: 637 DRISIIPRGQTLSQVVFRRLSEESYIFERRPQLLHRLQVFLGARAAEEVIYGRDTSKASV 696

[Close]
BLAST of IVF0015982 vs. ExPASy TrEMBL
Match: A0A6N2M4S7 (PHD-type domain-containing protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS320552 PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 4.0e-19
Identity = 52/75 (69.33%), Postives = 60/75 (80.00%), Query Frame = 0 

Query: 16   GDSERHESIVQSDMDDAVDWHRVRSSGGQCRRATTEMGVAITSHLLRRYESAKVECCDRI 75
            G  + H +I+QSDMDDAVD   V    GQCRRATTE+GVA+TSHLLRRYE+AKVECCDRI
Sbjct: 2025 GVRQGHAAILQSDMDDAVDRLTVGPKRGQCRRATTELGVAMTSHLLRRYENAKVECCDRI 2084

Query: 76   SIIPRGQV---LIFH 88
            SI+PRGQ    L+FH
Sbjct: 2085 SIVPRGQTLSQLVFH 2099

[Close]
BLAST of IVF0015982 vs. NCBI nr
Match: TYK00786.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 135 bits (340), Expect = 1.20e-33
Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 0 

Query: 19  ERHESIVQSDMDDAVDWHRVRSSGGQCRRATTEMGVAITSHLLRRYESAKVECCDRISII 78
           ERHESIVQSDMDDAVDWHRVRSSGGQCRRATTEMGVAITSHLLRRYESAKVECCDRISII
Sbjct: 341 ERHESIVQSDMDDAVDWHRVRSSGGQCRRATTEMGVAITSHLLRRYESAKVECCDRISII 400

Query: 79  PRGQV 83
           PRGQV
Sbjct: 401 PRGQV 405

[Close]
BLAST of IVF0015982 vs. NCBI nr
Match: KAA0060543.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 135 bits (340), Expect = 1.20e-33
Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 0 

Query: 19  ERHESIVQSDMDDAVDWHRVRSSGGQCRRATTEMGVAITSHLLRRYESAKVECCDRISII 78
           ERHESIVQSDMDDAVDWHRVRSSGGQCRRATTEMGVAITSHLLRRYESAKVECCDRISII
Sbjct: 352 ERHESIVQSDMDDAVDWHRVRSSGGQCRRATTEMGVAITSHLLRRYESAKVECCDRISII 411

Query: 79  PRGQV 83
           PRGQV
Sbjct: 412 PRGQV 416

[Close]
BLAST of IVF0015982 vs. NCBI nr
Match: XP_038877975.1 (probable inactive ATP-dependent zinc metalloprotease FTSHI 1, chloroplastic [Benincasa hispida])

HSP 1 Score: 106 bits (264), Expect = 1.96e-23
Identity = 90/258 (34.88%), Postives = 91/258 (35.27%), Query Frame = 0 

Query: 21  HESIVQSDMDDAVDWHRV--RSSG------GQCRRATTEMGVAITSHLLRRYESAKVECC 80
           HESIVQSDMDDAVD   V  R  G      GQCRRATTEMGVAITSHLLR+YESAKVECC
Sbjct: 674 HESIVQSDMDDAVDRLTVGPRRVGIELGHQGQCRRATTEMGVAITSHLLRKYESAKVECC 733

Query: 81  DRISIIPRGQ-------------------------------------------------- 121
           DRISIIPRGQ                                                  
Sbjct: 734 DRISIIPRGQTLSQVVFRRLDDESYMFERRPQLLHRLQVFLGGRAAEEVIYGRDTSKASV 793

[Close]
BLAST of IVF0015982 vs. NCBI nr
Match: XP_016901157.1 (PREDICTED: probable inactive ATP-dependent zinc metalloprotease FTSHI 1, chloroplastic, partial [Cucumis melo])

HSP 1 Score: 103 bits (257), Expect = 1.70e-22
Identity = 87/258 (33.72%), Postives = 91/258 (35.27%), Query Frame = 0 

Query: 21  HESIVQSDMDDAVDWHRV--RSSG------GQCRRATTEMGVAITSHLLRRYESAKVECC 80
           HESI QSDMDDA+D   V  R  G      GQCRRATTE+GVAITSHLLRRYESA+VECC
Sbjct: 577 HESIDQSDMDDAIDRLTVGPRRIGIELGHQGQCRRATTEIGVAITSHLLRRYESARVECC 636

Query: 81  DRISIIPRGQ-------------------------------------------------- 121
           DRISIIPRGQ                                                  
Sbjct: 637 DRISIIPRGQTLSQVVFRRLSEESYIFERRPQLLHRLQVFLGARAAEEVIYGRDTSKASV 696

[Close]
BLAST of IVF0015982 vs. NCBI nr
Match: KAA0044923.1 (putative inactive ATP-dependent zinc metalloprotease FTSHI 1 [Cucumis melo var. makuwa] >TYK16547.1 putative inactive ATP-dependent zinc metalloprotease FTSHI 1 [Cucumis melo var. makuwa])

HSP 1 Score: 103 bits (257), Expect = 1.72e-22
Identity = 87/258 (33.72%), Postives = 91/258 (35.27%), Query Frame = 0 

Query: 21  HESIVQSDMDDAVDWHRV--RSSG------GQCRRATTEMGVAITSHLLRRYESAKVECC 80
           HESI QSDMDDA+D   V  R  G      GQCRRATTE+GVAITSHLLRRYESA+VECC
Sbjct: 674 HESIDQSDMDDAIDRLTVGPRRIGIELGHQGQCRRATTEIGVAITSHLLRRYESARVECC 733

Query: 81  DRISIIPRGQ-------------------------------------------------- 121
           DRISIIPRGQ                                                  
Sbjct: 734 DRISIIPRGQTLSQVVFRRLSEESYIFERRPQLLHRLQVFLGARAAEEVIYGRDTSKASV 793

[Close]
BLAST of IVF0015982 vs. TAIR 10
Match: AT4G23940.1 (FtsH extracellular protease family )

HSP 1 Score: 91.7 bits (226), Expect = 5.2e-19
Identity = 50/78 (64.10%), Postives = 57/78 (73.08%), Query Frame = 0 

Query: 21  HESIVQSDMDDAVDWHRVRSS--------GGQCRRATTEMGVAITSHLLRRYESAKVECC 80
           H SI+QSDMDDAVD   V  +         GQCRRATTE+GVAITSHLL RYE+AK+E C
Sbjct: 663 HNSILQSDMDDAVDRLTVGPTRIGLELGHQGQCRRATTEVGVAITSHLLLRYENAKIERC 722

Query: 81  DRISIIPRGQVL---IFH 88
           DR+SIIPRGQ L   +FH
Sbjct: 723 DRVSIIPRGQTLSQVVFH 740


HSP 2 Score: 60.5 bits (145), Expect = 1.3e-09
Identity = 26/49 (53.06%), Postives = 38/49 (77.55%), Query Frame = 0 

Query: 73  DRISIIPRGQVLIFHEEIIGEEIDFILDNYPPQTPISVLFQEENPGRLP 122
           ++ +++   +VL+  +EI GE IDFILD+YPPQTP++ L QE+NPG LP
Sbjct: 872 NQTALLKTVKVLLNQKEISGEAIDFILDHYPPQTPLNSLLQEQNPGSLP 920

The following BLAST results are available for this feature:
BLAST of IVF0015982 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O229937.3e-1864.10Probable inactive ATP-dependent zinc metalloprotease FTSHI 1, chloroplastic OS=A... [more]
BLAST of IVF0015982 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7UX591.3e-28100.00Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
A0A5A7UX593.4e-26100.00Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
A0A5D3BRA03.4e-26100.00Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A1S4DYV73.1e-1933.72probable inactive ATP-dependent zinc metalloprotease FTSHI 1, chloroplastic OS=C... [more]
A0A6N2M4S74.0e-1969.33PHD-type domain-containing protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS3205... [more]
BLAST of IVF0015982 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK00786.11.20e-33100.00Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa][more]
KAA0060543.11.20e-33100.00Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa][more]
XP_038877975.11.96e-2334.88probable inactive ATP-dependent zinc metalloprotease FTSHI 1, chloroplastic [Ben... [more]
XP_016901157.11.70e-2233.72PREDICTED: probable inactive ATP-dependent zinc metalloprotease FTSHI 1, chlorop... [more]
KAA0044923.11.72e-2233.72putative inactive ATP-dependent zinc metalloprotease FTSHI 1 [Cucumis melo var. ... [more]
BLAST of IVF0015982 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G23940.15.2e-1964.10FtsH extracellular protease family [more]
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 10..26
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..26
NoneNo IPR availablePANTHERPTHR23076:SF111INACTIVE ATP-DEPENDENT ZINC METALLOPROTEASE FTSHI 1, CHLOROPLASTIC-RELATEDcoord: 82..125
NoneNo IPR availablePANTHERPTHR23076METALLOPROTEASE M41 FTSHcoord: 20..84
NoneNo IPR availablePANTHERPTHR23076:SF111INACTIVE ATP-DEPENDENT ZINC METALLOPROTEASE FTSHI 1, CHLOROPLASTIC-RELATEDcoord: 20..84
NoneNo IPR availablePANTHERPTHR23076METALLOPROTEASE M41 FTSHcoord: 82..125

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0015982.1IVF0015982.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
cellular_component GO:0005737 cytoplasm
cellular_component GO:0016020 membrane
molecular_function GO:0005524 ATP binding
molecular_function GO:0016887 ATP hydrolysis activity
molecular_function GO:0008237 metallopeptidase activity
molecular_function GO:0003676 nucleic acid binding