IVF0015922 (gene) Melon (IVF77) v1

Overview


Name	IVF0015922
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	GCK domain-containing protein
Location	chr10: 2257502 .. 2258768 (-)
RNA-Seq Expression	IVF0015922
Synteny	IVF0015922

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTTTAGCTTCAACAACAAGGAAGAGAAAGGAAAAGGAAACCCCTTGTTGAGCTTGATTCATTCCTGAGGGTTTTTGGGGGTTTAAGCCGCCGGCGGTGGAACGACGAACCATTCCTCCACAGCTTACCTAATGACATCGACACTGTCATCTTCGAATCCGATTGCTCCTCCGGCACCGACTAGGATGTCTACTTCGGAGTCGAAACTCCAAGACGCAGAATCTAACGCCGCCGCCAGTAAAACCCTGGAAGATCAACCACAATCGGATTCCGCAAGTCACTCTGATGAAAAATCTTCCGAGGAAGCAAGTCTATCAGGAAAGATTTCCGAGAGTGGAGGTGGAGACGAAGGAGGAGAAGACATAGAAGAGGAAGAGGAAGAGGAAGAGGAAGGGGAATGTGGGTTTTGCTTGTTTATGAAAGGCGGTGGTTGCAGAGATAGCTTCATTGCGTGGGAAAAGTGTATTGAGGAGGCGGAGAAGAACAAGGAGGATATTGTGGAGAAATGCTTTGAAGTGACAGGGGCATTGAAGAAGTGTATGGAAGCTCATCCAGATTATTACGAACCGATTCTGAAGGCGGAGAAAATGGCTGAGGAAGAAGCGATTATAGAATTGGAGAAGGAAATAGCTCCAAGTGCTTCCCAGGAAGATACGAATTCCGATGAACAGAAGGCCTCTGCGGGAGGTAAGTGAAGTTGGTTGCTGCTCGTTGGATCTGATTCTTGAAGCGGAAAAACATCATTTTGTTGAGAGTACTTTAGTTTCTAGTCGATCTTTTAACAGGCTGTGGAAGATATCTTCCTTAAACTCTTTGTCTTAGTGCACCTAAAGCTGATTCCTTTATCTGAAAGTATCATAGGAAAGAAGAGATCTTACCTTACACCACTTCTGATTTAATTCAAATTTCTGAATAATTATTCATGCCATTGTTGTTTAGTATCATTTTTCACAATCATATTCCCTAATGTGTCTTTGTCGTCTAGATTGAGGCTCCATCTGAATTCCCCCTTTCAGCTATGGTTGGAGACATTGGCAAAAATCATTACTTGTCACTTCATTTATGAACTATGTGTTCTTAATAAGAACTTCACTTGTGAACTGTGTAACACGTGATCTTTTTCCCTTTTAGAAACTTTCTGGTTTGTATGTACAAGAGTTGCATGGTTTAACCTTTCATCTGGACTTTGTGGAGACTAATTTGATGCTTTCTTGGTTTCCTGTGTGTGGCATGGGAACTAATTCTTGTTGACTGTTGAAAGAGGTG

mRNA sequence

CTTTTTAGCTTCAACAACAAGGAAGAGAAAGGAAAAGGAAACCCCTTGTTGAGCTTGATTCATTCCTGAGGGTTTTTGGGGGTTTAAGCCGCCGGCGGTGGAACGACGAACCATTCCTCCACAGCTTACCTAATGACATCGACACTGTCATCTTCGAATCCGATTGCTCCTCCGGCACCGACTAGGATGTCTACTTCGGAGTCGAAACTCCAAGACGCAGAATCTAACGCCGCCGCCAGTAAAACCCTGGAAGATCAACCACAATCGGATTCCGCAAGTCACTCTGATGAAAAATCTTCCGAGGAAGCAAGTCTATCAGGAAAGATTTCCGAGAGTGGAGGTGGAGACGAAGGAGGAGAAGACATAGAAGAGGAAGAGGAAGAGGAAGAGGAAGGGGAATGTGGGTTTTGCTTGTTTATGAAAGGCGGTGGTTGCAGAGATAGCTTCATTGCGTGGGAAAAGTGTATTGAGGAGGCGGAGAAGAACAAGGAGGATATTGTGGAGAAATGCTTTGAAGTGACAGGGGCATTGAAGAAGTGTATGGAAGCTCATCCAGATTATTACGAACCGATTCTGAAGGCGGAGAAAATGGCTGAGGAAGAAGCGATTATAGAATTGGAGAAGGAAATAGCTCCAAGTGCTTCCCAGGAAGATACGAATTCCGATGAACAGAAGGCCTCTGCGGGAGGTAAGTGAAGTTGGTTGCTGCTCGTTGGATCTGATTCTTGAAGCGGAAAAACATCATTTTGTTGAGAGTACTTTAGTTTCTAGTCGATCTTTTAACAGGCTGTGGAAGATATCTTCCTTAAACTCTTTGTCTTAGTGCACCTAAAGCTGATTCCTTTATCTGAAAGTATCATAGGAAAGAAGAGATCTTACCTTACACCACTTCTGATTTAATTCAAATTTCTGAATAATTATTCATGCCATTGTTGTTTAGTATCATTTTTCACAATCATATTCCCTAATGTGTCTTTGTCGTCTAGATTGAGGCTCCATCTGAATTCCCCCTTTCAGCTATGGTTGGAGACATTGGCAAAAATCATTACTTGTCACTTCATTTATGAACTATGTGTTCTTAATAAGAACTTCACTTGTGAACTGTGTAACACGTGATCTTTTTCCCTTTTAGAAACTTTCTGGTTTGTATGTACAAGAGTTGCATGGTTTAACCTTTCATCTGGACTTTGTGGAGACTAATTTGATGCTTTCTTGGTTTCCTGTGTGTGGCATGGGAACTAATTCTTGTTGACTGTTGAAAGAGGTG

Coding sequence (CDS)

ATGACATCGACACTGTCATCTTCGAATCCGATTGCTCCTCCGGCACCGACTAGGATGTCTACTTCGGAGTCGAAACTCCAAGACGCAGAATCTAACGCCGCCGCCAGTAAAACCCTGGAAGATCAACCACAATCGGATTCCGCAAGTCACTCTGATGAAAAATCTTCCGAGGAAGCAAGTCTATCAGGAAAGATTTCCGAGAGTGGAGGTGGAGACGAAGGAGGAGAAGACATAGAAGAGGAAGAGGAAGAGGAAGAGGAAGGGGAATGTGGGTTTTGCTTGTTTATGAAAGGCGGTGGTTGCAGAGATAGCTTCATTGCGTGGGAAAAGTGTATTGAGGAGGCGGAGAAGAACAAGGAGGATATTGTGGAGAAATGCTTTGAAGTGACAGGGGCATTGAAGAAGTGTATGGAAGCTCATCCAGATTATTACGAACCGATTCTGAAGGCGGAGAAAATGGCTGAGGAAGAAGCGATTATAGAATTGGAGAAGGAAATAGCTCCAAGTGCTTCCCAGGAAGATACGAATTCCGATGAACAGAAGGCCTCTGCGGGAGGTAAGTGA

Protein sequence

MTSTLSSSNPIAPPAPTRMSTSESKLQDAESNAAASKTLEDQPQSDSASHSDEKSSEEASLSGKISESGGGDEGGEDIEEEEEEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKNKEDIVEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEKEIAPSASQEDTNSDEQKASAGGK

Homology

[Close]

BLAST of IVF0015922 vs. ExPASy TrEMBL
Match: A0A5A7SVC8 (Transcription elongation factor spt5-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1932G00170 PE=4 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 6.8e-91
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 0


Query: 1   MTSTLSSSNPIAPPAPTRMSTSESKLQDAESNAAASKTLEDQPQSDSASHSDEKSSEEAS 60
           MTSTLSSSNPIAPPAPTRMSTSESKLQDAESNAAASKTLEDQPQSDSASHSDEKSSEEAS
Sbjct: 1   MTSTLSSSNPIAPPAPTRMSTSESKLQDAESNAAASKTLEDQPQSDSASHSDEKSSEEAS 60

Query: 61  LSGKISESGGGDEGGEDIEEEEEEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKNKE 120
           LSGKISESGGGDEGGEDIEEEEEEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKNKE
Sbjct: 61  LSGKISESGGGDEGGEDIEEEEEEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKNKE 120

Query: 121 DIVEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEKEIAPSASQEDTNSDEQ 180
           DIVEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEKEIAPSASQEDTNSDEQ
Sbjct: 121 DIVEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEKEIAPSASQEDTNSDEQ 180

Query: 181 KASAGGK 188
           KASAGGK
Sbjct: 181 KASAGGK 187

[Close]

BLAST of IVF0015922 vs. ExPASy TrEMBL
Match: A0A1S3BFM8 (transcription elongation factor spt5-like OS=Cucumis melo OX=3656 GN=LOC103489149 PE=4 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 6.8e-91
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 0


Query: 1   MTSTLSSSNPIAPPAPTRMSTSESKLQDAESNAAASKTLEDQPQSDSASHSDEKSSEEAS 60
           MTSTLSSSNPIAPPAPTRMSTSESKLQDAESNAAASKTLEDQPQSDSASHSDEKSSEEAS
Sbjct: 1   MTSTLSSSNPIAPPAPTRMSTSESKLQDAESNAAASKTLEDQPQSDSASHSDEKSSEEAS 60

Query: 61  LSGKISESGGGDEGGEDIEEEEEEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKNKE 120
           LSGKISESGGGDEGGEDIEEEEEEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKNKE
Sbjct: 61  LSGKISESGGGDEGGEDIEEEEEEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKNKE 120

Query: 121 DIVEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEKEIAPSASQEDTNSDEQ 180
           DIVEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEKEIAPSASQEDTNSDEQ
Sbjct: 121 DIVEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEKEIAPSASQEDTNSDEQ 180

Query: 181 KASAGGK 188
           KASAGGK
Sbjct: 181 KASAGGK 187

[Close]

BLAST of IVF0015922 vs. ExPASy TrEMBL
Match: A0A0A0KU46 (GCK domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G606380 PE=4 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 2.2e-73
Identity = 155/169 (91.72%), Postives = 161/169 (95.27%), Query Frame = 0


Query: 19  MSTSESKLQDAESNAAASKTLEDQPQSDSASHSDEKSSEEASLSGKISESGGGDEGGEDI 78
           MSTSESKLQDAESNAAA+KTLEDQPQSD+ ++S+EKSSEEASLSGKISESGGGDEGGEDI
Sbjct: 1   MSTSESKLQDAESNAAATKTLEDQPQSDTPNYSEEKSSEEASLSGKISESGGGDEGGEDI 60

Query: 79  EEEEEEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKNKEDIVEKCFEVTGALKKCME 138
               EEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKNKEDIVEKCFEVTGALKKCME
Sbjct: 61  ----EEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKNKEDIVEKCFEVTGALKKCME 120

Query: 139 AHPDYYEPILKAEKMAEEEAIIELEKEIAPSASQEDTNSDEQKASAGGK 188
           AHPDYYEPILKAEKMAEEEAIIELEKE  PSASQ+DTNSDEQKAS GGK
Sbjct: 121 AHPDYYEPILKAEKMAEEEAIIELEKETTPSASQQDTNSDEQKASVGGK 165

[Close]

BLAST of IVF0015922 vs. ExPASy TrEMBL
Match: A0A6J1DDG6 (uncharacterized protein LOC111019093 OS=Momordica charantia OX=3673 GN=LOC111019093 PE=4 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 2.1e-60
Identity = 144/196 (73.47%), Postives = 158/196 (80.61%), Query Frame = 0


Query: 4   TLSSSNPIAPPAPTRMSTSESKLQDAESNAAASKTLEDQPQSDSASHSDEKSSEEASLSG 63
           T S++NP  PPAPTRMSTSESKLQ +ESNAA SKTLEDQ    S    +EK+S E   SG
Sbjct: 70  TESAANPTTPPAPTRMSTSESKLQASESNAAXSKTLEDQAPIGSNIVQEEKNSAE---SG 129

Query: 64  KISESGGGDEGGEDIEEEEEEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKNKEDIV 123
           KI ESGG DEGGED+  EEEEEEEGECGFCLFMKGGGCRDSF+ WEKCIEEAEKNKEDIV
Sbjct: 130 KIPESGGDDEGGEDL-AEEEEEEEGECGFCLFMKGGGCRDSFMDWEKCIEEAEKNKEDIV 189

Query: 124 EKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEKEIAPSASQED--------- 183
           EKCFEVTGALKKCMEAH DYY PILKAEK+AEEEAIIELEKE+A +A+Q++         
Sbjct: 190 EKCFEVTGALKKCMEAHADYYAPILKAEKVAEEEAIIELEKELASNATQQNMNSRGPEVN 249

Query: 184 ---TNSDEQKASAGGK 188
               NS+EQKASAGGK
Sbjct: 250 VGSENSEEQKASAGGK 261

[Close]

BLAST of IVF0015922 vs. ExPASy TrEMBL
Match: A0A6J1K434 (uncharacterized protein LOC111492108 OS=Cucurbita maxima OX=3661 GN=LOC111492108 PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 3.2e-56
Identity = 133/180 (73.89%), Postives = 147/180 (81.67%), Query Frame = 0


Query: 19  MSTSESKLQDAESN--AAASKTLEDQPQSDSASHSDEKSSEEASLSGKISESGGGDEGGE 78
           MSTSESKLQDAESN  AAA+KT EDQ Q  + +HS+EKS +E+  SGKISESGG DEGGE
Sbjct: 1   MSTSESKLQDAESNAAAAAAKTPEDQQQLGAPNHSEEKSPQESVQSGKISESGGEDEGGE 60

Query: 79  DIEEEEEEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKNKEDIVEKCFEVTGALKKC 138
           D+    +EEEEGECGFCLFMKGGGCRDSF+ WEKCIEEAEKNKEDIVEKCFEVTGALKKC
Sbjct: 61  DL----DEEEEGECGFCLFMKGGGCRDSFVEWEKCIEEAEKNKEDIVEKCFEVTGALKKC 120

Query: 139 MEAHPDYYEPILKAEKMAEEEAIIELEKEIAPSASQEDTNS------------DEQKASA 185
           MEAH DYYEPILKAEKMAE EAIIELEKE  P+A+Q+ T+S            +EQKASA
Sbjct: 121 MEAHADYYEPILKAEKMAENEAIIELEKESTPNATQQHTDSKDLEVISGTENLEEQKASA 176

[Close]

BLAST of IVF0015922 vs. NCBI nr
Match: XP_008446394.1 (PREDICTED: transcription elongation factor spt5-like [Cucumis melo] >KAA0034443.1 transcription elongation factor spt5-like [Cucumis melo var. makuwa] >TYK17691.1 transcription elongation factor spt5-like [Cucumis melo var. makuwa])

HSP 1 Score: 342 bits (876), Expect = 7.20e-118
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 0


Query: 1   MTSTLSSSNPIAPPAPTRMSTSESKLQDAESNAAASKTLEDQPQSDSASHSDEKSSEEAS 60
           MTSTLSSSNPIAPPAPTRMSTSESKLQDAESNAAASKTLEDQPQSDSASHSDEKSSEEAS
Sbjct: 1   MTSTLSSSNPIAPPAPTRMSTSESKLQDAESNAAASKTLEDQPQSDSASHSDEKSSEEAS 60

Query: 61  LSGKISESGGGDEGGEDIEEEEEEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKNKE 120
           LSGKISESGGGDEGGEDIEEEEEEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKNKE
Sbjct: 61  LSGKISESGGGDEGGEDIEEEEEEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKNKE 120

Query: 121 DIVEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEKEIAPSASQEDTNSDEQ 180
           DIVEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEKEIAPSASQEDTNSDEQ
Sbjct: 121 DIVEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEKEIAPSASQEDTNSDEQ 180

Query: 181 KASAGGK 187
           KASAGGK
Sbjct: 181 KASAGGK 187

[Close]

BLAST of IVF0015922 vs. NCBI nr
Match: XP_011655692.1 (uncharacterized protein LOC105435574 [Cucumis sativus] >KGN51947.1 hypothetical protein Csa_007780 [Cucumis sativus])

HSP 1 Score: 283 bits (725), Expect = 3.46e-95
Identity = 155/169 (91.72%), Postives = 161/169 (95.27%), Query Frame = 0


Query: 19  MSTSESKLQDAESNAAASKTLEDQPQSDSASHSDEKSSEEASLSGKISESGGGDEGGEDI 78
           MSTSESKLQDAESNAAA+KTLEDQPQSD+ ++S+EKSSEEASLSGKISESGGGDEGGEDI
Sbjct: 1   MSTSESKLQDAESNAAATKTLEDQPQSDTPNYSEEKSSEEASLSGKISESGGGDEGGEDI 60

Query: 79  EEEEEEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKNKEDIVEKCFEVTGALKKCME 138
           EEEEE    GECGFCLFMKGGGCRDSFIAWEKCIEEAEKNKEDIVEKCFEVTGALKKCME
Sbjct: 61  EEEEE----GECGFCLFMKGGGCRDSFIAWEKCIEEAEKNKEDIVEKCFEVTGALKKCME 120

Query: 139 AHPDYYEPILKAEKMAEEEAIIELEKEIAPSASQEDTNSDEQKASAGGK 187
           AHPDYYEPILKAEKMAEEEAIIELEKE  PSASQ+DTNSDEQKAS GGK
Sbjct: 121 AHPDYYEPILKAEKMAEEEAIIELEKETTPSASQQDTNSDEQKASVGGK 165

[Close]

BLAST of IVF0015922 vs. NCBI nr
Match: XP_038893081.1 (uncharacterized protein LOC120081968 [Benincasa hispida])

HSP 1 Score: 247 bits (630), Expect = 1.53e-80
Identity = 140/181 (77.35%), Postives = 155/181 (85.64%), Query Frame = 0


Query: 19  MSTSESKLQDAESNAAASKTLEDQPQSDSASHSDEKSSEEASLSGKISESGGGDEGGEDI 78
           MSTSESKLQDAES AAA+KTLEDQPQS S++ S+EK SEE++ SG+I ESGGGDE GED+
Sbjct: 1   MSTSESKLQDAESKAAATKTLEDQPQSGSSNRSEEKYSEESAQSGRIPESGGGDEEGEDL 60

Query: 79  EEEEEEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKNKEDIVEKCFEVTGALKKCME 138
           EEEEE    GECGFCLFMKGGGC+DSFI WEKCIEEAEKNKEDIVEKCFEVTGALKKCME
Sbjct: 61  EEEEE----GECGFCLFMKGGGCKDSFIEWEKCIEEAEKNKEDIVEKCFEVTGALKKCME 120

Query: 139 AHPDYYEPILKAEKMAEEEAIIELEKEIAPSASQEDTNS------------DEQKASAGG 187
           AH DYYEPILKAEKMAEEEAIIELEKEI P+A+Q+++NS            +EQKASAGG
Sbjct: 121 AHADYYEPILKAEKMAEEEAIIELEKEITPNATQQNSNSKDLEVNPGSENLEEQKASAGG 177

[Close]

BLAST of IVF0015922 vs. NCBI nr
Match: XP_022151071.1 (uncharacterized protein LOC111019093 [Momordica charantia])

HSP 1 Score: 240 bits (613), Expect = 9.34e-77
Identity = 144/196 (73.47%), Postives = 158/196 (80.61%), Query Frame = 0


Query: 4   TLSSSNPIAPPAPTRMSTSESKLQDAESNAAASKTLEDQPQSDSASHSDEKSSEEASLSG 63
           T S++NP  PPAPTRMSTSESKLQ +ESNAA SKTLEDQ    S    +EK+S E   SG
Sbjct: 70  TESAANPTTPPAPTRMSTSESKLQASESNAAXSKTLEDQAPIGSNIVQEEKNSAE---SG 129

Query: 64  KISESGGGDEGGEDIEEEEEEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKNKEDIV 123
           KI ESGG DEGGED+ EEEEEEE GECGFCLFMKGGGCRDSF+ WEKCIEEAEKNKEDIV
Sbjct: 130 KIPESGGDDEGGEDLAEEEEEEE-GECGFCLFMKGGGCRDSFMDWEKCIEEAEKNKEDIV 189

Query: 124 EKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEKEIAPSASQEDTNS------ 183
           EKCFEVTGALKKCMEAH DYY PILKAEK+AEEEAIIELEKE+A +A+Q++ NS      
Sbjct: 190 EKCFEVTGALKKCMEAHADYYAPILKAEKVAEEEAIIELEKELASNATQQNMNSRGPEVN 249

Query: 184 ------DEQKASAGGK 187
                 +EQKASAGGK
Sbjct: 250 VGSENSEEQKASAGGK 261

[Close]

BLAST of IVF0015922 vs. NCBI nr
Match: XP_022997117.1 (uncharacterized protein LOC111492108 [Cucurbita maxima])

HSP 1 Score: 227 bits (579), Expect = 9.69e-73
Identity = 133/180 (73.89%), Postives = 147/180 (81.67%), Query Frame = 0


Query: 19  MSTSESKLQDAESNAAAS--KTLEDQPQSDSASHSDEKSSEEASLSGKISESGGGDEGGE 78
           MSTSESKLQDAESNAAA+  KT EDQ Q  + +HS+EKS +E+  SGKISESGG DEGGE
Sbjct: 1   MSTSESKLQDAESNAAAAAAKTPEDQQQLGAPNHSEEKSPQESVQSGKISESGGEDEGGE 60

Query: 79  DIEEEEEEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKNKEDIVEKCFEVTGALKKC 138
           D++EEEE    GECGFCLFMKGGGCRDSF+ WEKCIEEAEKNKEDIVEKCFEVTGALKKC
Sbjct: 61  DLDEEEE----GECGFCLFMKGGGCRDSFVEWEKCIEEAEKNKEDIVEKCFEVTGALKKC 120

Query: 139 MEAHPDYYEPILKAEKMAEEEAIIELEKEIAPSASQEDTNS------------DEQKASA 184
           MEAH DYYEPILKAEKMAE EAIIELEKE  P+A+Q+ T+S            +EQKASA
Sbjct: 121 MEAHADYYEPILKAEKMAENEAIIELEKESTPNATQQHTDSKDLEVISGTENLEEQKASA 176

[Close]

BLAST of IVF0015922 vs. TAIR 10
Match: AT1G14060.1 (GCK domain-containing protein )

HSP 1 Score: 126.7 bits (317), Expect = 1.9e-29
Identity = 88/179 (49.16%), Postives = 105/179 (58.66%), Query Frame = 0


Query: 6   SSSNPIAPPAPTRMSTSESKLQDAE-SNAAASKTLEDQPQSDSASHSDEKSSEEASLSGK 65
           S +N  APPA         KL DA  S  A S+ L D       S +  +  E++    K
Sbjct: 19  SQNNEEAPPA------KSEKLGDASPSTPAPSEELGD-------SSTVWRDPEDSESDEK 78

Query: 66  ISESGGGDEGGEDIEEEEEEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKNKEDIVE 125
             E GGGD  G         EEEGECGFCLFMKGGGC+DSF+AWE+C+E AEKNKEDIV 
Sbjct: 79  PEEGGGGDADG---------EEEGECGFCLFMKGGGCKDSFVAWEECVEAAEKNKEDIVT 138

Query: 126 KCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEKEIAPSASQEDTNSDEQKAS 184
            C EVT  LKKCM+ H DYY+PIL AEK AE E   ELE E      +E+  S+E+ A+
Sbjct: 139 NCMEVTSMLKKCMDEHSDYYQPILAAEKAAEAEVKKELEAE--KKKEEEEKISEEEVAA 173

[Close]

BLAST of IVF0015922 vs. TAIR 10
Match: AT5G02210.1 (GCK domain-containing protein )

HSP 1 Score: 71.2 bits (173), Expect = 9.7e-13
Identity = 51/119 (42.86%), Postives = 71/119 (59.66%), Query Frame = 0


Query: 53  EKSSEEASLSGKISESGGGDEGGEDIEEEEEEEEEGECGFCLFMKGGGCRDSFIAW-EKC 112
           ++S+EE+ +   +S +       ++I EEE+++      F  FMKGGGC++SF AW + C
Sbjct: 50  QRSNEESHVKTFLSST---TVSLDEINEEEDQK------FVEFMKGGGCKESFTAWNDDC 109

Query: 113 ---IEEAEKNKEDIVEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEKEIA 168
               EEAEKNK D+V KC  + G   KCM+ H DYY PIL  +K  EE     LEKE+A
Sbjct: 110 NFTEEEAEKNK-DLVTKCAGLFGTFSKCMDTHSDYYHPILAVKKTTEE----HLEKELA 154

[Close]

BLAST of IVF0015922 vs. TAIR 10
Match: AT5G57570.1 (GCK domain-containing protein )

HSP 1 Score: 71.2 bits (173), Expect = 9.7e-13
Identity = 47/123 (38.21%), Postives = 66/123 (53.66%), Query Frame = 0


Query: 33  AAASKTLEDQPQSDSASHSDEKSSEEASLSGKISESGGGDEGGEDIEEEEEEEEEGECGF 92
           ++ S    D+  S +         E  +L   ++E+G G         + EEEE GEC  
Sbjct: 5   SSVSMAYSDEDPSANQGQFSRDEDESRTLIEDLNETGEG---------KGEEEESGECRL 64

Query: 93  CLFMKGGGCRDSFIAWEKCIEEAEKN-KEDIVEKCFEVTGALKKCMEAHPDYYEPILKAE 152
           C F+KGG C++SFIA E+C++EAE++ +E    KC EV    K CM  +P YYEPIL  E
Sbjct: 65  CRFIKGGECKESFIALEQCVDEAEESGEESDFTKCKEVRAKFKTCMYENPVYYEPILAGE 118

Query: 153 KMA 155
             A
Sbjct: 125 ARA 118

[Close]

BLAST of IVF0015922 vs. TAIR 10
Match: AT5G57640.1 (GCK domain-containing protein )

HSP 1 Score: 67.0 bits (162), Expect = 1.8e-11
Identity = 53/157 (33.76%), Postives = 82/157 (52.23%), Query Frame = 0


Query: 20  STSESKLQD------AESNAAASKTLEDQPQSDSASHSDEKSSEEASLSGKISESGGGDE 79
           S +E+K ++       + +  + +TL +  +    S +  +   +   S  + E  G +E
Sbjct: 6   SVAEAKTEEDPSTNQGDGDDESPRTLIEDQRDVEESKTLSEDQVDVKESKTLIEDQGDEE 65

Query: 80  GGEDIEE--EEEEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKNKEDIVEKCFEVTG 139
             + ++E  +E EEE GEC  C F+KGG C+++F   E C +EA+KN ED V KC E   
Sbjct: 66  ESKTLDEDLDETEEESGECPLCQFIKGGECKEAFTELENCCDEAKKNNEDHVSKCKEARL 125

Query: 140 ALKKCMEAHPDYYEPILKAEKMAEEEAIIEL---EKE 166
             K CM  +P YYEP+L  E  A  + + EL   EKE
Sbjct: 126 IFKTCMYDNPVYYEPLLAGEARAMAKMLSELLNAEKE 162

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BLAST of IVF0015922 vs. TAIR 10
Match: AT1G14048.1 (GCK domain-containing protein )

HSP 1 Score: 50.4 bits (119), Expect = 1.8e-06
Identity = 39/102 (38.24%), Postives = 52/102 (50.98%), Query Frame = 0


Query: 75  GEDIEEEE--EEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKNKEDIVEKCFEVTGA 134
           GE +   E  EEEE+GE  F  FM+GGGC++ F  WE C +EA             V   
Sbjct: 14  GESVSPNEVREEEEKGEV-FSAFMRGGGCKEPFTDWEDCTDEATN---------VGVFAM 73

Query: 135 LKKCME-AHPDYYEPILKAEKMAEEEAIIELEKEIAPSASQE 174
           + KCM     D+Y P L A+K A+E     +EKE+    S+E
Sbjct: 74  MTKCMVWMLTDHYRPFLAAKKTAQE----HIEKELQAFLSKE 101

The following BLAST results are available for this feature:

BLAST of IVF0015922 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0015922 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SVC8	6.8e-91	100.00	Transcription elongation factor spt5-like OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A1S3BFM8	6.8e-91	100.00	transcription elongation factor spt5-like OS=Cucumis melo OX=3656 GN=LOC10348914...	[more]
A0A0A0KU46	2.2e-73	91.72	GCK domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G606380 PE=4 SV...	[more]
A0A6J1DDG6	2.1e-60	73.47	uncharacterized protein LOC111019093 OS=Momordica charantia OX=3673 GN=LOC111019...	[more]
A0A6J1K434	3.2e-56	73.89	uncharacterized protein LOC111492108 OS=Cucurbita maxima OX=3661 GN=LOC111492108...	[more]

BLAST of IVF0015922 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008446394.1	7.20e-118	100.00	PREDICTED: transcription elongation factor spt5-like [Cucumis melo] >KAA0034443....	[more]
XP_011655692.1	3.46e-95	91.72	uncharacterized protein LOC105435574 [Cucumis sativus] >KGN51947.1 hypothetical ...	[more]
XP_038893081.1	1.53e-80	77.35	uncharacterized protein LOC120081968 [Benincasa hispida]	[more]
XP_022151071.1	9.34e-77	73.47	uncharacterized protein LOC111019093 [Momordica charantia]	[more]
XP_022997117.1	9.69e-73	73.89	uncharacterized protein LOC111492108 [Cucurbita maxima]	[more]

BLAST of IVF0015922 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G14060.1	1.9e-29	49.16	GCK domain-containing protein	[more]
AT5G02210.1	9.7e-13	42.86	GCK domain-containing protein	[more]
AT5G57570.1	9.7e-13	38.21	GCK domain-containing protein	[more]
AT5G57640.1	1.8e-11	33.76	GCK domain-containing protein	[more]
AT1G14048.1	1.8e-06	38.24	GCK domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SMART	SM01227	GCK_2	coord: 88..162 e-value: 1.5E-41 score: 154.1
None	No IPR available	GENE3D	1.10.287.2900		coord: 70..148 e-value: 3.2E-8 score: 35.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..89
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..45
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 46..60
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 165..187
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 72..89
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 169..187
None	No IPR available	PANTHER	PTHR34357:SF2	F7A19.14 PROTEIN-RELATED	coord: 19..182
None	No IPR available	PANTHER	PTHR34357	F7A19.14 PROTEIN-RELATED	coord: 19..182
IPR012891	GCK	PFAM	PF07802	GCK	coord: 88..158 e-value: 2.4E-36 score: 124.0

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0015922.2	IVF0015922.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006414	translational elongation
molecular_function	GO:0003746	translation elongation factor activity