IVF0015878 (gene) Melon (IVF77) v1

Overview
NameIVF0015878
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPentatricopeptide repeat-containing protein
Locationchr09: 13353538 .. 13358009 (-)
RNA-Seq ExpressionIVF0015878
SyntenyIVF0015878
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCAACATTTCCTTAAAGGTTCTATTTTTCGTTCGGTTATACCATCTTGTTGTGGTGAGTAAGGAGCGTGAATACTATTTGATTCACACACCTGTGATCTTTATCCTTTTATTGTAATTGATTTTCAGTTTCTCCTTTGAAATTCAAAAGCATTCTATTAGCTTCATCTTGAAAAGAAACCTAATAATTTTTTCCACCGGTGCAGTGTTTTTTCATAAGACAAAAAGAGGGAAATTGAATGGATTGCTCATCAAATTTCCATTAATATTCTTTCTCAGTTCCTCGAATTTCTCTAATTCATGGCATTACTTCGTCAAAAACTGTCACCTATTGTTCTCTCATCATCCAAAATTTCTCTCTGCTTATCCATACGAAAACTCATCTCAACTCCAGTTGCAGATGATCTTATCAACGATGATGCAACTGTTAATTCCATATGCGAGTCCTTCACAAGACGCCAAAGCTGGGACGCTCTTTCTCGAAAATTCCAGTTTCTCGAATTAAACGACCTCTTGGTTCAAAAAGTCCTGCTCAAATTCCAGCAACCCGTTGATGCCAAACTGGCTCTGGGGTTCTTCCACTGGTCGGCCAAGAGGAAAAATTTCAATCATGGGTCTCAATCCTACGGTATTATGATTCATATTTTAGTGAAAGCGCGGCTGGTACTCGATGCTCGAGCTTTGCTCCAGTCCATATTGAAGAAAAATGAGGGGAACTCTTTTGATTACTCTGTTGTAGACTCGCTATTGGATTCCTATAAGGTGACTGGTTCATCTCCATTTGTGTTTGATTTATTGGTTCAGACTTGTGCTAAATTGAGATTGATTGATTTTGCTTTGTGTTTTTGTTCCCATTTGGAGGAACGTGGGTTCTCATTGAGTTTGATAAGTTTCAACACTTTGATTCATGTTTTGGAAAAATCTGATGAGAATCGTAAGGTTTGGAAAATTTATGAGCAAATGATCGGGAAAAGAGTTTACCCAAATGCAATTACAGTTAGAATCATGATTAATTCGTTATGTAAGGAAGGTAAATTGCAAGAAACTTCTGATATGTTGAATAGAATCCACGGCAGTCGTTGCTCTGCTTCTTTGATTGTCAATGCTTGTTTGATTTACAGGATTTTGGAGGAGGGAAGAGTTGAAGATGGTGTAATGTTGTTGAAGAGAATGTTGCAGAAAAATATGGTTCTTGATGACATTGCTTATTCACTGATTGTTTATGCTAAAGTCAAAACTGGGAGCATAACATCCACATGGGAAGTGTTTGAGGAAATGTCTAAAAGAGGGTTTCAGGCGAATTCTTTCATTTATACCTTGCTCATTGGTGTCCACTGTAGAGGGGGAGAGGTTGAGGAAGCACATTGCTTAATGCAAGAGATGGAAAACATGGGTTTGAAGCCATATTCTGAGACCTTTAATCTTCTCATTGAAGGGTGTGCTATATCAGGACATTCAGAAGAAATTTGAGAATGTGTGAGAAAATGTTAGAAAGAGGGTTTCTTCCTAGTTGTTCAGTTTTCAATGTGGCAATAGCTAAGATTTGTGAGGAAGGAGATGTGAAAAAGGCTAATGAATTGTTAACCATTTTATTAGATAAAGGATTTTTACCTGATGAAACCACTTACACCAATCTAATCATAGGATATAGGAAAAGTGGTGAAATTCTGGAGATTCTCAAGCTTTATTATGAAATGGAAGCTAGATTGCTATCTCCTGGGATTTCAGTTTTCTTTGCACTCATTGGGAGCCTTTGTCAATCTGGGAGATTGGAGGAAGCAGAGAAATATTTGAAGATTGTGAAAGATAGTTCTCTAACACCTAGTCTCTCTATATACCAGGCATTAATCTTGTTCTACTTGAAGAAGGGTAATAGAGCAAAAGCTCTAGAACTGTATAATGAGATGATGTTTGATGGATAGAAGATTATCTGTTCTAAGCATGTGCAGGTTTCAACGAACTGACACGTTCATGTACCTCTCTTCTCTCGCAGAGTAATTTACGTTCAAAGAAGCTACTCAATTGAAAGGTAATTTTTGGTGCCTTTTATTTATTTATTCATTTAAATTCACTACCAAAGAAATAATAGCTCTTCTAAATTCAATAGTTAAGAATCAATTATCGACTATTTATTTAGCCTAGCCTTTATATGACGAGAGGGTTCAATTCAAATGGAACCTTATCTTCAAGAAAACAGTGGCTATGCTTTCTGTTGACCGTTTGTTAATTCTTGAGGCTACTTATCTTCATTTTTATGATTATGAATGGACCAAGAAGGTTTAGAAGTTTGACATCTGATAACAAAGGAGAGTACACTTTGCAACGAAGTAGCGTTGATCAAGGTAATTAGGGCTTAATCTTTCTCATCCACTGCTCATTTTCAGGATTCAATTGAGGAGGTTGACCTTCGGTTAGAATGGTGCATTTGGTGGATTGATTGTTCCATCAATATACTTGAACAACCGGCAAGCCTTAAGAATCAGAGAAATCTGGAAGTACCAAAGAACATAATTAGACAAATCAAGATGAACAGATAGATATGAGATTGCAAATATTCATGAGATGAAATTGCATTGAGGAGTTCTAAAAATTCTGTTGATCCGCCATTACTAGCACAAAATTCAGTGCAAAAGAGGAAGTTTTATACTCGTCATAACAAAAAAGTAAGTCTTACTGCTCTAATAGATTGATAAATTC

mRNA sequence

TCAACATTTCCTTAAAGGTTCTATTTTTCGTTCGGTTATACCATCTTGTTGTGGTGAGTAAGGAGCGTGAATACTATTTGATTCACACACCTGTGATCTTTATCCTTTTATTGTAATTGATTTTCAGTTTCTCCTTTGAAATTCAAAAGCATTCTATTAGCTTCATCTTGAAAAGAAACCTAATAATTTTTTCCACCGGTGCAGTGTTTTTTCATAAGACAAAAAGAGGGAAATTGAATGGATTGCTCATCAAATTTCCATTAATATTCTTTCTCAGTTCCTCGAATTTCTCTAATTCATGGCATTACTTCGTCAAAAACTGTCACCTATTGTTCTCTCATCATCCAAAATTTCTCTCTGCTTATCCATACGAAAACTCATCTCAACTCCAGTTGCAGATGATCTTATCAACGATGATGCAACTGTTAATTCCATATGCGAGTCCTTCACAAGACGCCAAAGCTGGGACGCTCTTTCTCGAAAATTCCAGTTTCTCGAATTAAACGACCTCTTGGTTCAAAAAGTCCTGCTCAAATTCCAGCAACCCGTTGATGCCAAACTGGCTCTGGGGTTCTTCCACTGGTCGGCCAAGAGGAAAAATTTCAATCATGGGTCTCAATCCTACGGTATTATGATTCATATTTTAGTGAAAGCGCGGCTGGTACTCGATGCTCGAGCTTTGCTCCAGTCCATATTGAAGAAAAATGAGGGGAACTCTTTTGATTACTCTGTTGTAGACTCGCTATTGGATTCCTATAAGGTGACTGGTTCATCTCCATTTGTGTTTGATTTATTGGTTCAGACTTGTGCTAAATTGAGATTGATTGATTTTGCTTTGTGTTTTTGTTCCCATTTGGAGGAACGTGGGTTCTCATTGAGTTTGATAAGTTTCAACACTTTGATTCATGTTTTGGAAAAATCTGATGAGAATCGTAAGGTTTGGAAAATTTATGAGCAAATGATCGGGAAAAGAGTTTACCCAAATGCAATTACAGTTAGAATCATGATTAATTCGTTATGTAAGGAAGGTAAATTGCAAGAAACTTCTGATATGTTGAATAGAATCCACGGCAGTCGTTGCTCTGCTTCTTTGATTGTCAATGCTTGTTTGATTTACAGGATTTTGGAGGAGGGAAGAGTTGAAGATGGTGTAATGTTGTTGAAGAGAATGTTGCAGAAAAATATGGTTCTTGATGACATTGCTTATTCACTGATTGTTTATGCTAAAGTCAAAACTGGGAGCATAACATCCACATGGGAAGTGTTTGAGGAAATGTCTAAAAGAGGGTTTCAGGCGAATTCTTTCATTTATACCTTGCTCATTGGTGTCCACTGTAGAGGGGGAGAGGTTGAGGAAGCACATTGCTTAATGCAAGAGATGGAAAACATGGGTTTGAAGCCATATTCTGAGACCTTTAATCTTCTCATTGAAGGGTGTGCTATATCAGGACATTCAGAAGAAATTTGAGAATGTGTGAGAAAATGTTAGAAAGAGGGTTTCTTCCTAGTTGTTCAGTTTTCAATGTGGCAATAGCTAAGATTTGTGAGGAAGGAGATGTGAAAAAGGCTAATGAATTGTTAACCATTTTATTAGATAAAGGATTTTTACCTGATGAAACCACTTACACCAATCTAATCATAGGATATAGGAAAAGTGGTGAAATTCTGGAGATTCTCAAGCTTTATTATGAAATGGAAGCTAGATTGCTATCTCCTGGGATTTCAGTTTTCTTTGCACTCATTGGGAGCCTTTGTCAATCTGGGAGATTGGAGGAAGCAGAGAAATATTTGAAGATTGTGAAAGATAGTTCTCTAACACCTAGTCTCTCTATATACCAGGCATTAATCTTGTTCTACTTGAAGAAGGGTAATAGAGCAAAAGCTCTAGAACTGTATAATGAGATGATGTTTGATGGATAGAAGATTATCTGTTCTAAGCATGTGCAGGTTTCAACGAACTGACACGTTCATGTACCTCTCTTCTCTCGCAGAGTAATTTACGTTCAAAGAAGCTACTCAATTGAAAGGATTCAATTGAGGAGGTTGACCTTCGGTTAGAATGGTGCATTTGGTGGATTGATTGTTCCATCAATATACTTGAACAACCGGCAAGCCTTAAGAATCAGAGAAATCTGGAAGTACCAAAGAACATAATTAGACAAATCAAGATGAACAGATAGATATGAGATTGCAAATATTCATGAGATGAAATTGCATTGAGGAGTTCTAAAAATTCTGTTGATCCGCCATTACTAGCACAAAATTCAGTGCAAAAGAGGAAGTTTTATACTCGTCATAACAAAAAAGTAAGTCTTACTGCTCTAATAGATTGATAAATTC

Coding sequence (CDS)

ATGGCATTACTTCGTCAAAAACTGTCACCTATTGTTCTCTCATCATCCAAAATTTCTCTCTGCTTATCCATACGAAAACTCATCTCAACTCCAGTTGCAGATGATCTTATCAACGATGATGCAACTGTTAATTCCATATGCGAGTCCTTCACAAGACGCCAAAGCTGGGACGCTCTTTCTCGAAAATTCCAGTTTCTCGAATTAAACGACCTCTTGGTTCAAAAAGTCCTGCTCAAATTCCAGCAACCCGTTGATGCCAAACTGGCTCTGGGGTTCTTCCACTGGTCGGCCAAGAGGAAAAATTTCAATCATGGGTCTCAATCCTACGGTATTATGATTCATATTTTAGTGAAAGCGCGGCTGGTACTCGATGCTCGAGCTTTGCTCCAGTCCATATTGAAGAAAAATGAGGGGAACTCTTTTGATTACTCTGTTGTAGACTCGCTATTGGATTCCTATAAGGTGACTGGTTCATCTCCATTTGTGTTTGATTTATTGGTTCAGACTTGTGCTAAATTGAGATTGATTGATTTTGCTTTGTGTTTTTGTTCCCATTTGGAGGAACGTGGGTTCTCATTGAGTTTGATAAGTTTCAACACTTTGATTCATGTTTTGGAAAAATCTGATGAGAATCGTAAGGTTTGGAAAATTTATGAGCAAATGATCGGGAAAAGAGTTTACCCAAATGCAATTACAGTTAGAATCATGATTAATTCGTTATGTAAGGAAGGTAAATTGCAAGAAACTTCTGATATGTTGAATAGAATCCACGGCAGTCGTTGCTCTGCTTCTTTGATTGTCAATGCTTGTTTGATTTACAGGATTTTGGAGGAGGGAAGAGTTGAAGATGGTGTAATGTTGTTGAAGAGAATGTTGCAGAAAAATATGGTTCTTGATGACATTGCTTATTCACTGATTGTTTATGCTAAAGTCAAAACTGGGAGCATAACATCCACATGGGAAGTGTTTGAGGAAATGTCTAAAAGAGGGTTTCAGGCGAATTCTTTCATTTATACCTTGCTCATTGGTGTCCACTGTAGAGGGGGAGAGGTTGAGGAAGCACATTGCTTAATGCAAGAGATGGAAAACATGGGTTTGAAGCCATATTCTGAGACCTTTAATCTTCTCATTGAAGGGTGTGCTATATCAGGACATTCAGAAGAAATTTGA

Protein sequence

MALLRQKLSPIVLSSSKISLCLSIRKLISTPVADDLINDDATVNSICESFTRRQSWDALSRKFQFLELNDLLVQKVLLKFQQPVDAKLALGFFHWSAKRKNFNHGSQSYGIMIHILVKARLVLDARALLQSILKKNEGNSFDYSVVDSLLDSYKVTGSSPFVFDLLVQTCAKLRLIDFALCFCSHLEERGFSLSLISFNTLIHVLEKSDENRKVWKIYEQMIGKRVYPNAITVRIMINSLCKEGKLQETSDMLNRIHGSRCSASLIVNACLIYRILEEGRVEDGVMLLKRMLQKNMVLDDIAYSLIVYAKVKTGSITSTWEVFEEMSKRGFQANSFIYTLLIGVHCRGGEVEEAHCLMQEMENMGLKPYSETFNLLIEGCAISGHSEEI
Homology
[Close]
BLAST of IVF0015878 vs. ExPASy Swiss-Prot
Match: Q3ECH5 (Pentatricopeptide repeat-containing protein At1g66345, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g66345 PE=3 SV=1)

HSP 1 Score: 348.6 bits (893), Expect = 9.2e-95
Identity = 175/346 (50.58%), Postives = 242/346 (69.94%), Query Frame = 0 

Query: 43  VNSICESFTRRQSWDALSRKFQFLELNDLLVQKVLLKFQQPVDAKLALGFFHWSAKRKNF 102
           ++ I +S     +W+ LS KF  ++L+D L++ +LL+F+ P  AK AL FFHWS+  +N 
Sbjct: 50  IDYISKSLQSNDTWETLSTKFSSIDLSDSLIETILLRFKNPETAKQALSFFHWSSHTRNL 109

Query: 103 NHGSQSYGIMIHILVKARLVLDARALLQSILKKNEGNSFDYSVVDSLLDSYKVTGSSPFV 162
            HG +SY + IHILVKARL++DARAL++S L  +  +S    +VDSLLD+Y+++ S+P V
Sbjct: 110 RHGIKSYALTIHILVKARLLIDARALIESSLLNSPPDS---DLVDSLLDTYEISSSTPLV 169

Query: 163 FDLLVQTCAKLRLIDFALCFCSHLEERGFSLSLISFNTLIHVLEKSDENRKVWKIYEQMI 222
           FDLLVQ  AK+R ++        L + GF+LS+I+ NTLIH   KS  +  VW+IYE  I
Sbjct: 170 FDLLVQCYAKIRYLELGFDVFKRLCDCGFTLSVITLNTLIHYSSKSKIDDLVWRIYECAI 229

Query: 223 GKRVYPNAITVRIMINSLCKEGKLQETSDMLNRIHGSRCSASLIVNACLIYRILEEGRVE 282
            KR+YPN IT+RIMI  LCKEG+L+E  D+L+RI G RC  S+IVN  L++R+LEE R+E
Sbjct: 230 DKRIYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIE 289

Query: 283 DGVMLLKRMLQKNMVLDDIAYSLIVYAKVKTGSITSTWEVFEEMSKRGFQANSFIYTLLI 342
           + + LLKR+L KNMV+D I YS++VYAK K G + S  +VF+EM +RGF ANSF+YT+ +
Sbjct: 290 ESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFV 349

Query: 343 GVHCRGGEVEEAHCLMQEMENMGLKPYSETFNLLIEGCAISGHSEE 389
            V C  G+V+EA  L+ EME  G+ PY ETFN LI G A  G  E+
Sbjct: 350 RVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEK 392

[Close]
BLAST of IVF0015878 vs. ExPASy Swiss-Prot
Match: Q9LVQ5 (Pentatricopeptide repeat-containing protein At5g55840 OS=Arabidopsis thaliana OX=3702 GN=At5g55840 PE=3 SV=2)

HSP 1 Score: 137.9 bits (346), Expect = 2.5e-31
Identity = 86/307 (28.01%), Postives = 159/307 (51.79%), Query Frame = 0 

Query: 84  VDAKLALGFFHWSAKRKNF--NHGSQSYGIMIHILVKARLVLDARALLQSILKKNEGNSF 143
           V  KLAL F  W  K+     +H  Q   I  HILV+AR+   AR +L+ +   +  +SF
Sbjct: 48  VHGKLALKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELSLMSGKSSF 107

Query: 144 DYSVVDSLLDSYKVTGSSPFVFDLLVQTCAKLRLIDFALCFCSHLEERGFSLSLISFNTL 203
              V  +L+ +Y++  S+P V+D+L++   +  +I  +L     +   GF+ S+ + N +
Sbjct: 108 ---VFGALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAI 167

Query: 204 IHVLEKSDENRKVWKIYEQMIGKRVYPNAITVRIMINSLCKEGKLQETSDMLNRIHGSRC 263
           +  + KS E+  VW   ++M+ +++ P+  T  I+IN LC EG  +++S ++ ++  S  
Sbjct: 168 LGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGY 227

Query: 264 SASLIVNACLIYRILEEGRVEDGVMLLKRMLQKNMVLDDIAYSLIVYAKVKTGSITSTWE 323
           + +++    +++   ++GR +  + LL  M  K +  D   Y+++++   ++  I   + 
Sbjct: 228 APTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYL 287

Query: 324 VFEEMSKRGFQANSFIYTLLIGVHCRGGEVEEAHCLMQEMENMGLKPYSETFNLLIEGCA 383
           +  +M KR    N   Y  LI      G+V  A  L+ EM + GL P   TFN LI+G  
Sbjct: 288 LLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHI 347

Query: 384 ISGHSEE 389
             G+ +E
Sbjct: 348 SEGNFKE 351

[Close]
BLAST of IVF0015878 vs. ExPASy Swiss-Prot
Match: Q9FND8 (Pentatricopeptide repeat-containing protein At5g40400 OS=Arabidopsis thaliana OX=3702 GN=At5g40400 PE=2 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 8.2e-27
Identity = 98/383 (25.59%), Postives = 168/383 (43.86%), Query Frame = 0 

Query: 14  SSSKISLCLSIRKLISTPVADDL---INDDATVNSICESFTRRQSWDALSR-----KFQF 73
           SSS +  C +I K I  P+ + L    N    V+ IC +         L       K   
Sbjct: 15  SSSIVPRCSNIPKPILNPLYNLLPQSQNPSKIVDVICSTLNHSDYSVLLPNLRDEVKSLI 74

Query: 74  LELNDLLVQKVLLKFQQPVDAKLALGFFHW----SAKRKNFNHGSQSYGIMIHILVKARL 133
             L    + +VLL+FQ   DA  A+ FF W      KR N      +Y +++HILV ++ 
Sbjct: 75  PHLGYPEISRVLLRFQS--DASRAITFFKWVKFDLGKRPNVG----NYCLLLHILVSSKK 134

Query: 134 VLDARALLQSILKKNEGNSFDYSVVDSLLDSYKVTGSSPFVFDLLVQTCAKLRLIDFALC 193
              A   L  +++       +  V   L+ +       P VFD+LV+   KL L++    
Sbjct: 135 FPLAMQFLCELIELTSKKE-EVDVFRVLVSATDECNWDPVVFDMLVKGYLKLGLVEEGFR 194

Query: 194 FCSHLEERGFSLSLISFNTLIHVLEKSDENRKVWKIYEQMIGKRVYPNAITVRIMINSLC 253
               + + GFS+S+++ N L++ L K D     W++Y  M    ++PN  T  I+ N  C
Sbjct: 195 VFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVMCRVGIHPNTYTFNILTNVFC 254

Query: 254 KEGKLQETSDMLNRIHGSRCSASLIVNACLIYRILEEGRVEDGVMLLKRMLQKNMVLDDI 313
            +   +E  D L ++        L+    L+      GR+++   L K M ++ +V D +
Sbjct: 255 NDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLV 314

Query: 314 AYSLIVYAKVKTGSITSTWEVFEEMSKRGFQANSFIYTLLIGVHCRGGEVEEAHCLMQEM 373
            Y+ ++    K G +    + F  M  RG + +   Y  LI  +C+ G ++++  L+ EM
Sbjct: 315 TYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEM 374

Query: 374 ENMGLKPYSETFNLLIEGCAISG 385
               + P   T  +++EG    G
Sbjct: 375 LGNSVVPDRFTCKVIVEGFVREG 390

[Close]
BLAST of IVF0015878 vs. ExPASy Swiss-Prot
Match: Q9FIX3 (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX=3702 GN=EMB2745 PE=2 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 1.1e-26
Identity = 82/311 (26.37%), Postives = 150/311 (48.23%), Query Frame = 0 

Query: 76  VLLKFQQPVDAKLALGFFHWSAKRKNFNHGSQSYGIMIHILVKARLVLDARALLQSILKK 135
           +LLK Q   D  L L F +W+   + F    +   I +HIL K +L   A+ L + +  K
Sbjct: 54  LLLKSQN--DQALILKFLNWANPHQFFTLRCKC--ITLHILTKFKLYKTAQILAEDVAAK 113

Query: 136 NEGNSFDYSVVDSLLDSYKVTGSSPFVFDLLVQTCAKLRLIDFALCFCSHLEERGFSLSL 195
              + +   V  SL ++Y +  S+  VFDL+V++ ++L LID AL      +  GF   +
Sbjct: 114 TLDDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGV 173

Query: 196 ISFNTLIHVLEKSDENRK-VWKIYEQMIGKRVYPNAITVRIMINSLCKEGKLQETSDMLN 255
           +S+N ++    +S  N      ++++M+  +V PN  T  I+I   C  G +     + +
Sbjct: 174 LSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFD 233

Query: 256 RIHGSRCSASLIVNACLIYRILEEGRVEDGVMLLKRMLQKNMVLDDIAYSLIVYAKVKTG 315
           ++    C  +++    LI    +  +++DG  LL+ M  K +  + I+Y++++    + G
Sbjct: 234 KMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREG 293

Query: 316 SITSTWEVFEEMSKRGFQANSFIYTLLIGVHCRGGEVEEAHCLMQEMENMGLKPYSETFN 375
            +     V  EM++RG+  +   Y  LI  +C+ G   +A  +  EM   GL P   T+ 
Sbjct: 294 RMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYT 353

Query: 376 LLIEGCAISGH 386
            LI     +G+
Sbjct: 354 SLIHSMCKAGN 360

[Close]
BLAST of IVF0015878 vs. ExPASy Swiss-Prot
Match: P0C894 (Putative pentatricopeptide repeat-containing protein At2g02150 OS=Arabidopsis thaliana OX=3702 GN=At2g02150 PE=3 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 1.4e-26
Identity = 97/336 (28.87%), Postives = 150/336 (44.64%), Query Frame = 0 

Query: 56  WD--ALSRKFQFLELNDLLVQKVLLKFQQPVDAKLALGFFHWSAKRKNFNHGSQSYGIMI 115
           WD   L + F  L L  + V +VL++ ++  D KLA  FF WS  R  F H  +SY I+ 
Sbjct: 93  WDDPGLEKLFD-LTLAPIWVPRVLVELKE--DPKLAFKFFKWSMTRNGFKHSVESYCIVA 152

Query: 116 HILVKARLVLDARALLQSILKKNEGNSFDYSVVDSLLDSYKVTGSSPFVFDLLVQTCAKL 175
           HIL  AR+  DA     S+LK+   +  D  V D L  +  V      VFD L      L
Sbjct: 153 HILFCARMYYDA----NSVLKEMVLSKADCDVFDVLWSTRNVCVPGFGVFDALFSVLIDL 212

Query: 176 RLIDFAL-CFCSHLEERGFSLSLISFNTLIHVLEKSDENRKVWKIYEQMIGKRVYPNAIT 235
            +++ A+ CF      R F  +  S N L+H   K  +   V + ++ MIG    P   T
Sbjct: 213 GMLEEAIQCFSKMKRFRVFPKTR-SCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFT 272

Query: 236 VRIMINSLCKEGKLQETSDMLNRIHGSRCSASLIVNACLIYRILEEGRVEDGVMLLKRML 295
             IMI+ +CKEG ++    +   +         +    +I    + GR++D V   + M 
Sbjct: 273 YNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMK 332

Query: 296 QKNMVLDDIAYSLIVYAKVKTGSITSTWEVFEEMSKRGFQANSFIYTLLIGVHCRGGEVE 355
                 D I Y+ ++    K G +    E + EM   G + N   Y+ L+   C+ G ++
Sbjct: 333 DMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQ 392

Query: 356 EAHCLMQEMENMGLKPYSETFNLLIE-GCAISGHSE 388
           +A     +M  +GL P   T+  LI+  C I   S+
Sbjct: 393 QAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSD 420

[Close]
BLAST of IVF0015878 vs. ExPASy TrEMBL
Match: A0A5D3DTQ8 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G003260 PE=4 SV=1)

HSP 1 Score: 760.8 bits (1963), Expect = 2.9e-216
Identity = 389/389 (100.00%), Postives = 389/389 (100.00%), Query Frame = 0 

Query: 1   MALLRQKLSPIVLSSSKISLCLSIRKLISTPVADDLINDDATVNSICESFTRRQSWDALS 60
           MALLRQKLSPIVLSSSKISLCLSIRKLISTPVADDLINDDATVNSICESFTRRQSWDALS
Sbjct: 1   MALLRQKLSPIVLSSSKISLCLSIRKLISTPVADDLINDDATVNSICESFTRRQSWDALS 60

Query: 61  RKFQFLELNDLLVQKVLLKFQQPVDAKLALGFFHWSAKRKNFNHGSQSYGIMIHILVKAR 120
           RKFQFLELNDLLVQKVLLKFQQPVDAKLALGFFHWSAKRKNFNHGSQSYGIMIHILVKAR
Sbjct: 61  RKFQFLELNDLLVQKVLLKFQQPVDAKLALGFFHWSAKRKNFNHGSQSYGIMIHILVKAR 120

Query: 121 LVLDARALLQSILKKNEGNSFDYSVVDSLLDSYKVTGSSPFVFDLLVQTCAKLRLIDFAL 180
           LVLDARALLQSILKKNEGNSFDYSVVDSLLDSYKVTGSSPFVFDLLVQTCAKLRLIDFAL
Sbjct: 121 LVLDARALLQSILKKNEGNSFDYSVVDSLLDSYKVTGSSPFVFDLLVQTCAKLRLIDFAL 180

Query: 181 CFCSHLEERGFSLSLISFNTLIHVLEKSDENRKVWKIYEQMIGKRVYPNAITVRIMINSL 240
           CFCSHLEERGFSLSLISFNTLIHVLEKSDENRKVWKIYEQMIGKRVYPNAITVRIMINSL
Sbjct: 181 CFCSHLEERGFSLSLISFNTLIHVLEKSDENRKVWKIYEQMIGKRVYPNAITVRIMINSL 240

Query: 241 CKEGKLQETSDMLNRIHGSRCSASLIVNACLIYRILEEGRVEDGVMLLKRMLQKNMVLDD 300
           CKEGKLQETSDMLNRIHGSRCSASLIVNACLIYRILEEGRVEDGVMLLKRMLQKNMVLDD
Sbjct: 241 CKEGKLQETSDMLNRIHGSRCSASLIVNACLIYRILEEGRVEDGVMLLKRMLQKNMVLDD 300

Query: 301 IAYSLIVYAKVKTGSITSTWEVFEEMSKRGFQANSFIYTLLIGVHCRGGEVEEAHCLMQE 360
           IAYSLIVYAKVKTGSITSTWEVFEEMSKRGFQANSFIYTLLIGVHCRGGEVEEAHCLMQE
Sbjct: 301 IAYSLIVYAKVKTGSITSTWEVFEEMSKRGFQANSFIYTLLIGVHCRGGEVEEAHCLMQE 360

Query: 361 MENMGLKPYSETFNLLIEGCAISGHSEEI 390
           MENMGLKPYSETFNLLIEGCAISGHSEEI
Sbjct: 361 MENMGLKPYSETFNLLIEGCAISGHSEEI 389

[Close]
BLAST of IVF0015878 vs. ExPASy TrEMBL
Match: A0A1S3CCN8 (pentatricopeptide repeat-containing protein At1g66345, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103499327 PE=4 SV=1)

HSP 1 Score: 760.8 bits (1963), Expect = 2.9e-216
Identity = 389/389 (100.00%), Postives = 389/389 (100.00%), Query Frame = 0 

Query: 1   MALLRQKLSPIVLSSSKISLCLSIRKLISTPVADDLINDDATVNSICESFTRRQSWDALS 60
           MALLRQKLSPIVLSSSKISLCLSIRKLISTPVADDLINDDATVNSICESFTRRQSWDALS
Sbjct: 1   MALLRQKLSPIVLSSSKISLCLSIRKLISTPVADDLINDDATVNSICESFTRRQSWDALS 60

Query: 61  RKFQFLELNDLLVQKVLLKFQQPVDAKLALGFFHWSAKRKNFNHGSQSYGIMIHILVKAR 120
           RKFQFLELNDLLVQKVLLKFQQPVDAKLALGFFHWSAKRKNFNHGSQSYGIMIHILVKAR
Sbjct: 61  RKFQFLELNDLLVQKVLLKFQQPVDAKLALGFFHWSAKRKNFNHGSQSYGIMIHILVKAR 120

Query: 121 LVLDARALLQSILKKNEGNSFDYSVVDSLLDSYKVTGSSPFVFDLLVQTCAKLRLIDFAL 180
           LVLDARALLQSILKKNEGNSFDYSVVDSLLDSYKVTGSSPFVFDLLVQTCAKLRLIDFAL
Sbjct: 121 LVLDARALLQSILKKNEGNSFDYSVVDSLLDSYKVTGSSPFVFDLLVQTCAKLRLIDFAL 180

Query: 181 CFCSHLEERGFSLSLISFNTLIHVLEKSDENRKVWKIYEQMIGKRVYPNAITVRIMINSL 240
           CFCSHLEERGFSLSLISFNTLIHVLEKSDENRKVWKIYEQMIGKRVYPNAITVRIMINSL
Sbjct: 181 CFCSHLEERGFSLSLISFNTLIHVLEKSDENRKVWKIYEQMIGKRVYPNAITVRIMINSL 240

Query: 241 CKEGKLQETSDMLNRIHGSRCSASLIVNACLIYRILEEGRVEDGVMLLKRMLQKNMVLDD 300
           CKEGKLQETSDMLNRIHGSRCSASLIVNACLIYRILEEGRVEDGVMLLKRMLQKNMVLDD
Sbjct: 241 CKEGKLQETSDMLNRIHGSRCSASLIVNACLIYRILEEGRVEDGVMLLKRMLQKNMVLDD 300

Query: 301 IAYSLIVYAKVKTGSITSTWEVFEEMSKRGFQANSFIYTLLIGVHCRGGEVEEAHCLMQE 360
           IAYSLIVYAKVKTGSITSTWEVFEEMSKRGFQANSFIYTLLIGVHCRGGEVEEAHCLMQE
Sbjct: 301 IAYSLIVYAKVKTGSITSTWEVFEEMSKRGFQANSFIYTLLIGVHCRGGEVEEAHCLMQE 360

Query: 361 MENMGLKPYSETFNLLIEGCAISGHSEEI 390
           MENMGLKPYSETFNLLIEGCAISGHSEEI
Sbjct: 361 MENMGLKPYSETFNLLIEGCAISGHSEEI 389

[Close]
BLAST of IVF0015878 vs. ExPASy TrEMBL
Match: A0A0A0KRP7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G423870 PE=4 SV=1)

HSP 1 Score: 711.8 bits (1836), Expect = 1.5e-201
Identity = 364/389 (93.57%), Postives = 374/389 (96.14%), Query Frame = 0 

Query: 1   MALLRQKLSPIVLSSSKISLCLSIRKLISTPVADDLINDDATVNSICESFTRRQSWDALS 60
           MALLRQKLSPIVL SSKISLCLS+R LIS PVAD LINDDATVNSIC+S TRRQSWD LS
Sbjct: 1   MALLRQKLSPIVL-SSKISLCLSMRNLISIPVADKLINDDATVNSICDSLTRRQSWDTLS 60

Query: 61  RKFQFLELNDLLVQKVLLKFQQPVDAKLALGFFHWSAKRKNFNHGSQSYGIMIHILVKAR 120
           RKFQFLELND LVQKVLLKFQQPVDAK ALGFFHWSAKRKNFNHG QS+GIMIHILVKAR
Sbjct: 61  RKFQFLELNDFLVQKVLLKFQQPVDAKRALGFFHWSAKRKNFNHGPQSFGIMIHILVKAR 120

Query: 121 LVLDARALLQSILKKNEGNSFDYSVVDSLLDSYKVTGSSPFVFDLLVQTCAKLRLIDFAL 180
           LVLDARALL+SILKKNEGNSFDYSVVDSL+DSY+VTGSSPFVFDLLVQTCAKLRLIDFAL
Sbjct: 121 LVLDARALLESILKKNEGNSFDYSVVDSLMDSYEVTGSSPFVFDLLVQTCAKLRLIDFAL 180

Query: 181 CFCSHLEERGFSLSLISFNTLIHVLEKSDENRKVWKIYEQMIGKRVYPNAITVRIMINSL 240
           C CSHLEERGFSLSLISFNTLIHV+EKSDEN KVWKIYEQMI KRVYPNAITVRIMINSL
Sbjct: 181 CVCSHLEERGFSLSLISFNTLIHVVEKSDENLKVWKIYEQMIRKRVYPNAITVRIMINSL 240

Query: 241 CKEGKLQETSDMLNRIHGSRCSASLIVNACLIYRILEEGRVEDGVMLLKRMLQKNMVLDD 300
           CKEGKLQETSDMLNRIHGSRCSASLIVNACLIYRILEEGRVEDG+ LLKRMLQKNMVLDD
Sbjct: 241 CKEGKLQETSDMLNRIHGSRCSASLIVNACLIYRILEEGRVEDGITLLKRMLQKNMVLDD 300

Query: 301 IAYSLIVYAKVKTGSITSTWEVFEEMSKRGFQANSFIYTLLIGVHCRGGEVEEAHCLMQE 360
           IAYSLIVYAKVKTGSITSTWEVFEEMS+RGFQANSFIYTL IGVHCRGG+VEEAHCLMQE
Sbjct: 301 IAYSLIVYAKVKTGSITSTWEVFEEMSERGFQANSFIYTLFIGVHCRGGKVEEAHCLMQE 360

Query: 361 MENMGLKPYSETFNLLIEGCAISGHSEEI 390
           MENMGLKPY ETFNLLIEGCAISGHSEEI
Sbjct: 361 MENMGLKPYPETFNLLIEGCAISGHSEEI 388

[Close]
BLAST of IVF0015878 vs. ExPASy TrEMBL
Match: A0A6J1HAX5 (pentatricopeptide repeat-containing protein At1g66345, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111461713 PE=4 SV=1)

HSP 1 Score: 636.7 bits (1641), Expect = 6.2e-179
Identity = 323/386 (83.68%), Postives = 350/386 (90.67%), Query Frame = 0 

Query: 1   MALLRQKLSPIVLSSSKISLCLSIRKLISTPVADDLINDDATVNSICESFTRRQSWDALS 60
           MA LRQKLS  +LSSSKIS C SIRKL S   AD+LIN+DA VNSIC+SFTRR+SWD L+
Sbjct: 1   MAFLRQKLSTFILSSSKISFCSSIRKLTSIAAADELINNDAIVNSICDSFTRRESWDTLT 60

Query: 61  RKFQFLELNDLLVQKVLLKFQQPVDAKLALGFFHWSAKRKNFNHGSQSYGIMIHILVKAR 120
           RKF+ LELND LVQKVLLKFQQ VDAK ALGFFHWSAKRKNFNHG QSYGIMIHILVKAR
Sbjct: 61  RKFETLELNDSLVQKVLLKFQQLVDAKRALGFFHWSAKRKNFNHGFQSYGIMIHILVKAR 120

Query: 121 LVLDARALLQSILKKNEGNSFDYSVVDSLLDSYKVTGSSPFVFDLLVQTCAKLRLIDFAL 180
           LV+DARALL+SILKKNEG+SF++S+VDSLLD+Y+VT SSPFVFDLL+QTCAKLRLIDFAL
Sbjct: 121 LVIDARALLESILKKNEGSSFNFSIVDSLLDTYEVTDSSPFVFDLLIQTCAKLRLIDFAL 180

Query: 181 CFCSHLEERGFSLSLISFNTLIHVLEKSDENRKVWKIYEQMIGKRVYPNAITVRIMINSL 240
              +HLEERGFSLSLISFNTL+HV+EKSDENRKVWKIYEQMI KRVYPN ITVRIMINSL
Sbjct: 181 NMSAHLEERGFSLSLISFNTLLHVVEKSDENRKVWKIYEQMIRKRVYPNVITVRIMINSL 240

Query: 241 CKEGKLQETSDMLNRIHGSRCSASLIVNACLIYRILEEGRVEDGVMLLKRMLQKNMVLDD 300
           CKEGKLQE SDML+RIHGSRCSASLIVN CLIYRILEEGRVEDGVMLLKRMLQKNM+LDD
Sbjct: 241 CKEGKLQEISDMLSRIHGSRCSASLIVNGCLIYRILEEGRVEDGVMLLKRMLQKNMILDD 300

Query: 301 IAYSLIVYAKVKTGSITSTWEVFEEMSKRGFQANSFIYTLLIGVHCRGGEVEEAHCLMQE 360
           IAYSLI+YAK+K G+I S  EVF+EMSKRGFQANSFIYTL IG HCRGG +EEAHCLM+E
Sbjct: 301 IAYSLILYAKLKIGNIKSAQEVFDEMSKRGFQANSFIYTLFIGAHCRGGRIEEAHCLMEE 360

Query: 361 MENMGLKPYSETFNLLIEGCAISGHS 387
           MENMGLKPY ETFNLLIEGC  S  S
Sbjct: 361 MENMGLKPYPETFNLLIEGCRDSEES 386

[Close]
BLAST of IVF0015878 vs. ExPASy TrEMBL
Match: A0A6J1JRQ4 (pentatricopeptide repeat-containing protein At1g66345, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111487740 PE=4 SV=1)

HSP 1 Score: 624.0 bits (1608), Expect = 4.2e-175
Identity = 321/389 (82.52%), Postives = 349/389 (89.72%), Query Frame = 0 

Query: 1   MALLRQKLSPIVLSSSKISLCLSIRKLISTPVADDLINDDATVNSICESFTRRQSWDALS 60
           MA LR+KLS  +LSSSKIS C SIRKL S   A +LIN+DA VNSIC+SFTRR+SWD L+
Sbjct: 1   MAFLRRKLSTFILSSSKISFCSSIRKLNSITAAGELINNDAVVNSICDSFTRRESWDTLT 60

Query: 61  RKFQFLELNDLLVQKVLLKFQQPVDAKLALGFFHWSAKRKNFNHGSQSYGIMIHILVKAR 120
           RKF+ LELND LVQKVLLKFQQ VD+K ALGFFHWSAKRKNFNHG QSYGIMIHILVKAR
Sbjct: 61  RKFETLELNDSLVQKVLLKFQQLVDSKRALGFFHWSAKRKNFNHGVQSYGIMIHILVKAR 120

Query: 121 LVLDARALLQSILKKNEGNSFDYSVVDSLLDSYKVTGSSPFVFDLLVQTCAKLRLIDFAL 180
           LV DARALL+SILKKNEG+SF++S+VDSLLD+Y+VT SSPFVFDLL+QTCAKLRLIDFAL
Sbjct: 121 LVNDARALLESILKKNEGSSFNFSIVDSLLDTYEVTDSSPFVFDLLIQTCAKLRLIDFAL 180

Query: 181 CFCSHLEERGFSLSLISFNTLIHVLEKSDENRKVWKIYEQMIGKRVYPNAITVRIMINSL 240
             C+HLEERGFSLSLISFNTL+HV+EKSDENRKVWKIYEQMI KRVYP+ ITVRIMINSL
Sbjct: 181 NMCAHLEERGFSLSLISFNTLLHVVEKSDENRKVWKIYEQMIRKRVYPDVITVRIMINSL 240

Query: 241 CKEGKLQETSDMLNRIHGSRCSASLIVNACLIYRILEEGRVEDGVMLLKRMLQKNMVLDD 300
           CKEGKLQE SDML+RIHGSRCSASLIVN CLIYRILEEGRVEDGVMLLKRMLQKNM+LDD
Sbjct: 241 CKEGKLQEISDMLSRIHGSRCSASLIVNGCLIYRILEEGRVEDGVMLLKRMLQKNMILDD 300

Query: 301 IAYSLIVYAKVKTGSITSTWEVFEEMSKRGFQANSFIYTLLIGVHCRGGEVEEAHCLMQE 360
           IAYSLIVYAK+K G+I    EVF+EMSKRGFQANSFIYTL IG HCR G +EEAHCLM+E
Sbjct: 301 IAYSLIVYAKLKIGNIKCAQEVFDEMSKRGFQANSFIYTLFIGAHCRDGRIEEAHCLMEE 360

Query: 361 MENMGLKPYSETFNLLI-EGCAISGHSEE 389
           MENMGLKPY ETFNLLI EGC   G SEE
Sbjct: 361 MENMGLKPYPETFNLLIEEGC---GDSEE 386

[Close]
BLAST of IVF0015878 vs. NCBI nr
Match: XP_008460528.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g66345, mitochondrial [Cucumis melo] >KAA0062307.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK26670.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 754 bits (1948), Expect = 4.61e-272
Identity = 389/389 (100.00%), Postives = 389/389 (100.00%), Query Frame = 0 

Query: 1   MALLRQKLSPIVLSSSKISLCLSIRKLISTPVADDLINDDATVNSICESFTRRQSWDALS 60
           MALLRQKLSPIVLSSSKISLCLSIRKLISTPVADDLINDDATVNSICESFTRRQSWDALS
Sbjct: 1   MALLRQKLSPIVLSSSKISLCLSIRKLISTPVADDLINDDATVNSICESFTRRQSWDALS 60

Query: 61  RKFQFLELNDLLVQKVLLKFQQPVDAKLALGFFHWSAKRKNFNHGSQSYGIMIHILVKAR 120
           RKFQFLELNDLLVQKVLLKFQQPVDAKLALGFFHWSAKRKNFNHGSQSYGIMIHILVKAR
Sbjct: 61  RKFQFLELNDLLVQKVLLKFQQPVDAKLALGFFHWSAKRKNFNHGSQSYGIMIHILVKAR 120

Query: 121 LVLDARALLQSILKKNEGNSFDYSVVDSLLDSYKVTGSSPFVFDLLVQTCAKLRLIDFAL 180
           LVLDARALLQSILKKNEGNSFDYSVVDSLLDSYKVTGSSPFVFDLLVQTCAKLRLIDFAL
Sbjct: 121 LVLDARALLQSILKKNEGNSFDYSVVDSLLDSYKVTGSSPFVFDLLVQTCAKLRLIDFAL 180

Query: 181 CFCSHLEERGFSLSLISFNTLIHVLEKSDENRKVWKIYEQMIGKRVYPNAITVRIMINSL 240
           CFCSHLEERGFSLSLISFNTLIHVLEKSDENRKVWKIYEQMIGKRVYPNAITVRIMINSL
Sbjct: 181 CFCSHLEERGFSLSLISFNTLIHVLEKSDENRKVWKIYEQMIGKRVYPNAITVRIMINSL 240

Query: 241 CKEGKLQETSDMLNRIHGSRCSASLIVNACLIYRILEEGRVEDGVMLLKRMLQKNMVLDD 300
           CKEGKLQETSDMLNRIHGSRCSASLIVNACLIYRILEEGRVEDGVMLLKRMLQKNMVLDD
Sbjct: 241 CKEGKLQETSDMLNRIHGSRCSASLIVNACLIYRILEEGRVEDGVMLLKRMLQKNMVLDD 300

Query: 301 IAYSLIVYAKVKTGSITSTWEVFEEMSKRGFQANSFIYTLLIGVHCRGGEVEEAHCLMQE 360
           IAYSLIVYAKVKTGSITSTWEVFEEMSKRGFQANSFIYTLLIGVHCRGGEVEEAHCLMQE
Sbjct: 301 IAYSLIVYAKVKTGSITSTWEVFEEMSKRGFQANSFIYTLLIGVHCRGGEVEEAHCLMQE 360

Query: 361 MENMGLKPYSETFNLLIEGCAISGHSEEI 389
           MENMGLKPYSETFNLLIEGCAISGHSEEI
Sbjct: 361 MENMGLKPYSETFNLLIEGCAISGHSEEI 389

[Close]
BLAST of IVF0015878 vs. NCBI nr
Match: XP_031740872.1 (pentatricopeptide repeat-containing protein At1g66345, mitochondrial [Cucumis sativus] >KGN51057.1 hypothetical protein Csa_008589 [Cucumis sativus])

HSP 1 Score: 706 bits (1821), Expect = 9.52e-253
Identity = 364/389 (93.57%), Postives = 374/389 (96.14%), Query Frame = 0 

Query: 1   MALLRQKLSPIVLSSSKISLCLSIRKLISTPVADDLINDDATVNSICESFTRRQSWDALS 60
           MALLRQKLSPIVLSS KISLCLS+R LIS PVAD LINDDATVNSIC+S TRRQSWD LS
Sbjct: 1   MALLRQKLSPIVLSS-KISLCLSMRNLISIPVADKLINDDATVNSICDSLTRRQSWDTLS 60

Query: 61  RKFQFLELNDLLVQKVLLKFQQPVDAKLALGFFHWSAKRKNFNHGSQSYGIMIHILVKAR 120
           RKFQFLELND LVQKVLLKFQQPVDAK ALGFFHWSAKRKNFNHG QS+GIMIHILVKAR
Sbjct: 61  RKFQFLELNDFLVQKVLLKFQQPVDAKRALGFFHWSAKRKNFNHGPQSFGIMIHILVKAR 120

Query: 121 LVLDARALLQSILKKNEGNSFDYSVVDSLLDSYKVTGSSPFVFDLLVQTCAKLRLIDFAL 180
           LVLDARALL+SILKKNEGNSFDYSVVDSL+DSY+VTGSSPFVFDLLVQTCAKLRLIDFAL
Sbjct: 121 LVLDARALLESILKKNEGNSFDYSVVDSLMDSYEVTGSSPFVFDLLVQTCAKLRLIDFAL 180

Query: 181 CFCSHLEERGFSLSLISFNTLIHVLEKSDENRKVWKIYEQMIGKRVYPNAITVRIMINSL 240
           C CSHLEERGFSLSLISFNTLIHV+EKSDEN KVWKIYEQMI KRVYPNAITVRIMINSL
Sbjct: 181 CVCSHLEERGFSLSLISFNTLIHVVEKSDENLKVWKIYEQMIRKRVYPNAITVRIMINSL 240

Query: 241 CKEGKLQETSDMLNRIHGSRCSASLIVNACLIYRILEEGRVEDGVMLLKRMLQKNMVLDD 300
           CKEGKLQETSDMLNRIHGSRCSASLIVNACLIYRILEEGRVEDG+ LLKRMLQKNMVLDD
Sbjct: 241 CKEGKLQETSDMLNRIHGSRCSASLIVNACLIYRILEEGRVEDGITLLKRMLQKNMVLDD 300

Query: 301 IAYSLIVYAKVKTGSITSTWEVFEEMSKRGFQANSFIYTLLIGVHCRGGEVEEAHCLMQE 360
           IAYSLIVYAKVKTGSITSTWEVFEEMS+RGFQANSFIYTL IGVHCRGG+VEEAHCLMQE
Sbjct: 301 IAYSLIVYAKVKTGSITSTWEVFEEMSERGFQANSFIYTLFIGVHCRGGKVEEAHCLMQE 360

Query: 361 MENMGLKPYSETFNLLIEGCAISGHSEEI 389
           MENMGLKPY ETFNLLIEGCAISGHSEEI
Sbjct: 361 MENMGLKPYPETFNLLIEGCAISGHSEEI 388

[Close]
BLAST of IVF0015878 vs. NCBI nr
Match: XP_038875410.1 (pentatricopeptide repeat-containing protein At1g66345, mitochondrial [Benincasa hispida] >XP_038875411.1 pentatricopeptide repeat-containing protein At1g66345, mitochondrial [Benincasa hispida])

HSP 1 Score: 668 bits (1723), Expect = 8.01e-238
Identity = 344/388 (88.66%), Postives = 361/388 (93.04%), Query Frame = 0 

Query: 1   MALLRQKLSPIVLSSSKISLCLSIRKLISTPVADDLINDDATVNSICESFTRRQSWDALS 60
           MALLRQKLS   LSSSK SLCLS RKLIS   AD+LINDDATVNSIC+SFTRR+SWD L+
Sbjct: 1   MALLRQKLSLFGLSSSKNSLCLSTRKLISIAAADELINDDATVNSICDSFTRRESWDTLT 60

Query: 61  RKFQFLELNDLLVQKVLLKFQQPVDAKLALGFFHWSAKRKNFNHGSQSYGIMIHILVKAR 120
           RKFQ L+LND LVQKVLLKFQQPVDAK ALGFFHWSAKRKNFNHGSQS GIMIHILVKAR
Sbjct: 61  RKFQLLQLNDFLVQKVLLKFQQPVDAKRALGFFHWSAKRKNFNHGSQSCGIMIHILVKAR 120

Query: 121 LVLDARALLQSILKKNEGNSFDYSVVDSLLDSYKVTGSSPFVFDLLVQTCAKLRLIDFAL 180
           LV+DARALL+SILKKNEG+SFD+SVVDSLLDSY+VT SSPFVFDLL+QTCAKLRLIDFAL
Sbjct: 121 LVIDARALLESILKKNEGSSFDFSVVDSLLDSYEVTSSSPFVFDLLIQTCAKLRLIDFAL 180

Query: 181 CFCSHLEERGFSLSLISFNTLIHVLEKSDENRKVWKIYEQMIGKRVYPNAITVRIMINSL 240
           C CS L E GFSLSLISFNTLIHV+EKSDENRKVWKIYE MI KRVYPNAIT RIMINSL
Sbjct: 181 CVCSRLGEHGFSLSLISFNTLIHVVEKSDENRKVWKIYEHMIRKRVYPNAITTRIMINSL 240

Query: 241 CKEGKLQETSDMLNRIHGSRCSASLIVNACLIYRILEEGRVEDGVMLLKRMLQKNMVLDD 300
           CKEGKLQETSDMLNR+HGSRCSASLIVNACLIYRILEEGRVEDGVMLLKRMLQKNMVLDD
Sbjct: 241 CKEGKLQETSDMLNRVHGSRCSASLIVNACLIYRILEEGRVEDGVMLLKRMLQKNMVLDD 300

Query: 301 IAYSLIVYAKVKTGSITSTWEVFEEMSKRGFQANSFIYTLLIGVHCRGGEVEEAHCLMQE 360
           IAYSLIVYAKVKTGSITS WEVFEEMSKRGFQANSFIYTL IGVHCR G++EEAHCLMQE
Sbjct: 301 IAYSLIVYAKVKTGSITSAWEVFEEMSKRGFQANSFIYTLFIGVHCREGKIEEAHCLMQE 360

Query: 361 MENMGLKPYSETFNLLIEGCAISGHSEE 388
           MENMGLKPY ETF+LLIEG A SGHS+E
Sbjct: 361 MENMGLKPYPETFSLLIEGYATSGHSKE 388

[Close]
BLAST of IVF0015878 vs. NCBI nr
Match: XP_023550461.1 (pentatricopeptide repeat-containing protein At1g66345, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 632 bits (1630), Expect = 9.99e-224
Identity = 324/386 (83.94%), Postives = 350/386 (90.67%), Query Frame = 0 

Query: 1   MALLRQKLSPIVLSSSKISLCLSIRKLISTPVADDLINDDATVNSICESFTRRQSWDALS 60
           MA LRQKLS  +LSSSKIS C SIRKL S   AD+LIN+DA VNSIC+SFTRR+SWD L+
Sbjct: 1   MAFLRQKLSTFILSSSKISFCSSIRKLNSITAADELINNDAIVNSICDSFTRRESWDTLT 60

Query: 61  RKFQFLELNDLLVQKVLLKFQQPVDAKLALGFFHWSAKRKNFNHGSQSYGIMIHILVKAR 120
           RKF+ LELND LVQKVLLKFQQ VDAK ALGFFHWSAKRKNFNHG QSYGIMIHILVKAR
Sbjct: 61  RKFETLELNDSLVQKVLLKFQQLVDAKRALGFFHWSAKRKNFNHGFQSYGIMIHILVKAR 120

Query: 121 LVLDARALLQSILKKNEGNSFDYSVVDSLLDSYKVTGSSPFVFDLLVQTCAKLRLIDFAL 180
           LV+DARALL+SILKKNEG+SF++S+VDSLLD+Y+VT SSPFVFDLL+QTCAKLRLIDFAL
Sbjct: 121 LVIDARALLESILKKNEGSSFNFSIVDSLLDTYEVTDSSPFVFDLLIQTCAKLRLIDFAL 180

Query: 181 CFCSHLEERGFSLSLISFNTLIHVLEKSDENRKVWKIYEQMIGKRVYPNAITVRIMINSL 240
             C+HLEERGFSLSLISFNTL+HV+EKSDENRKVWKIYEQMI KRVYPN ITVRIMINSL
Sbjct: 181 NMCAHLEERGFSLSLISFNTLLHVVEKSDENRKVWKIYEQMIRKRVYPNVITVRIMINSL 240

Query: 241 CKEGKLQETSDMLNRIHGSRCSASLIVNACLIYRILEEGRVEDGVMLLKRMLQKNMVLDD 300
           CKEGKLQE SDML+RIHGSRCSASLIVN CLIYRILEEGRVEDGVMLLKRMLQKNM+LDD
Sbjct: 241 CKEGKLQEISDMLSRIHGSRCSASLIVNGCLIYRILEEGRVEDGVMLLKRMLQKNMILDD 300

Query: 301 IAYSLIVYAKVKTGSITSTWEVFEEMSKRGFQANSFIYTLLIGVHCRGGEVEEAHCLMQE 360
           IAYSLIVYAK+K G+I S  EVF+EMSKRGFQANSFIYTL IG HCR G +EEAHCLM+E
Sbjct: 301 IAYSLIVYAKLKIGNIKSAQEVFDEMSKRGFQANSFIYTLFIGAHCRDGRIEEAHCLMEE 360

Query: 361 MENMGLKPYSETFNLLIEGCAISGHS 386
           MENMGLKPY ETFNLLIEGC  S  S
Sbjct: 361 MENMGLKPYPETFNLLIEGCRDSEES 386

[Close]
BLAST of IVF0015878 vs. NCBI nr
Match: XP_022961108.1 (pentatricopeptide repeat-containing protein At1g66345, mitochondrial [Cucurbita moschata])

HSP 1 Score: 630 bits (1626), Expect = 4.05e-223
Identity = 323/386 (83.68%), Postives = 350/386 (90.67%), Query Frame = 0 

Query: 1   MALLRQKLSPIVLSSSKISLCLSIRKLISTPVADDLINDDATVNSICESFTRRQSWDALS 60
           MA LRQKLS  +LSSSKIS C SIRKL S   AD+LIN+DA VNSIC+SFTRR+SWD L+
Sbjct: 1   MAFLRQKLSTFILSSSKISFCSSIRKLTSIAAADELINNDAIVNSICDSFTRRESWDTLT 60

Query: 61  RKFQFLELNDLLVQKVLLKFQQPVDAKLALGFFHWSAKRKNFNHGSQSYGIMIHILVKAR 120
           RKF+ LELND LVQKVLLKFQQ VDAK ALGFFHWSAKRKNFNHG QSYGIMIHILVKAR
Sbjct: 61  RKFETLELNDSLVQKVLLKFQQLVDAKRALGFFHWSAKRKNFNHGFQSYGIMIHILVKAR 120

Query: 121 LVLDARALLQSILKKNEGNSFDYSVVDSLLDSYKVTGSSPFVFDLLVQTCAKLRLIDFAL 180
           LV+DARALL+SILKKNEG+SF++S+VDSLLD+Y+VT SSPFVFDLL+QTCAKLRLIDFAL
Sbjct: 121 LVIDARALLESILKKNEGSSFNFSIVDSLLDTYEVTDSSPFVFDLLIQTCAKLRLIDFAL 180

Query: 181 CFCSHLEERGFSLSLISFNTLIHVLEKSDENRKVWKIYEQMIGKRVYPNAITVRIMINSL 240
              +HLEERGFSLSLISFNTL+HV+EKSDENRKVWKIYEQMI KRVYPN ITVRIMINSL
Sbjct: 181 NMSAHLEERGFSLSLISFNTLLHVVEKSDENRKVWKIYEQMIRKRVYPNVITVRIMINSL 240

Query: 241 CKEGKLQETSDMLNRIHGSRCSASLIVNACLIYRILEEGRVEDGVMLLKRMLQKNMVLDD 300
           CKEGKLQE SDML+RIHGSRCSASLIVN CLIYRILEEGRVEDGVMLLKRMLQKNM+LDD
Sbjct: 241 CKEGKLQEISDMLSRIHGSRCSASLIVNGCLIYRILEEGRVEDGVMLLKRMLQKNMILDD 300

Query: 301 IAYSLIVYAKVKTGSITSTWEVFEEMSKRGFQANSFIYTLLIGVHCRGGEVEEAHCLMQE 360
           IAYSLI+YAK+K G+I S  EVF+EMSKRGFQANSFIYTL IG HCRGG +EEAHCLM+E
Sbjct: 301 IAYSLILYAKLKIGNIKSAQEVFDEMSKRGFQANSFIYTLFIGAHCRGGRIEEAHCLMEE 360

Query: 361 MENMGLKPYSETFNLLIEGCAISGHS 386
           MENMGLKPY ETFNLLIEGC  S  S
Sbjct: 361 MENMGLKPYPETFNLLIEGCRDSEES 386

[Close]
BLAST of IVF0015878 vs. TAIR 10
Match: AT1G66345.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 348.6 bits (893), Expect = 6.5e-96
Identity = 175/346 (50.58%), Postives = 242/346 (69.94%), Query Frame = 0 

Query: 43  VNSICESFTRRQSWDALSRKFQFLELNDLLVQKVLLKFQQPVDAKLALGFFHWSAKRKNF 102
           ++ I +S     +W+ LS KF  ++L+D L++ +LL+F+ P  AK AL FFHWS+  +N 
Sbjct: 50  IDYISKSLQSNDTWETLSTKFSSIDLSDSLIETILLRFKNPETAKQALSFFHWSSHTRNL 109

Query: 103 NHGSQSYGIMIHILVKARLVLDARALLQSILKKNEGNSFDYSVVDSLLDSYKVTGSSPFV 162
            HG +SY + IHILVKARL++DARAL++S L  +  +S    +VDSLLD+Y+++ S+P V
Sbjct: 110 RHGIKSYALTIHILVKARLLIDARALIESSLLNSPPDS---DLVDSLLDTYEISSSTPLV 169

Query: 163 FDLLVQTCAKLRLIDFALCFCSHLEERGFSLSLISFNTLIHVLEKSDENRKVWKIYEQMI 222
           FDLLVQ  AK+R ++        L + GF+LS+I+ NTLIH   KS  +  VW+IYE  I
Sbjct: 170 FDLLVQCYAKIRYLELGFDVFKRLCDCGFTLSVITLNTLIHYSSKSKIDDLVWRIYECAI 229

Query: 223 GKRVYPNAITVRIMINSLCKEGKLQETSDMLNRIHGSRCSASLIVNACLIYRILEEGRVE 282
            KR+YPN IT+RIMI  LCKEG+L+E  D+L+RI G RC  S+IVN  L++R+LEE R+E
Sbjct: 230 DKRIYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIE 289

Query: 283 DGVMLLKRMLQKNMVLDDIAYSLIVYAKVKTGSITSTWEVFEEMSKRGFQANSFIYTLLI 342
           + + LLKR+L KNMV+D I YS++VYAK K G + S  +VF+EM +RGF ANSF+YT+ +
Sbjct: 290 ESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFV 349

Query: 343 GVHCRGGEVEEAHCLMQEMENMGLKPYSETFNLLIEGCAISGHSEE 389
            V C  G+V+EA  L+ EME  G+ PY ETFN LI G A  G  E+
Sbjct: 350 RVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEK 392

[Close]
BLAST of IVF0015878 vs. TAIR 10
Match: AT5G55840.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 137.9 bits (346), Expect = 1.7e-32
Identity = 86/307 (28.01%), Postives = 159/307 (51.79%), Query Frame = 0 

Query: 84  VDAKLALGFFHWSAKRKNF--NHGSQSYGIMIHILVKARLVLDARALLQSILKKNEGNSF 143
           V  KLAL F  W  K+     +H  Q   I  HILV+AR+   AR +L+ +   +  +SF
Sbjct: 88  VHGKLALKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELSLMSGKSSF 147

Query: 144 DYSVVDSLLDSYKVTGSSPFVFDLLVQTCAKLRLIDFALCFCSHLEERGFSLSLISFNTL 203
              V  +L+ +Y++  S+P V+D+L++   +  +I  +L     +   GF+ S+ + N +
Sbjct: 148 ---VFGALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAI 207

Query: 204 IHVLEKSDENRKVWKIYEQMIGKRVYPNAITVRIMINSLCKEGKLQETSDMLNRIHGSRC 263
           +  + KS E+  VW   ++M+ +++ P+  T  I+IN LC EG  +++S ++ ++  S  
Sbjct: 208 LGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGY 267

Query: 264 SASLIVNACLIYRILEEGRVEDGVMLLKRMLQKNMVLDDIAYSLIVYAKVKTGSITSTWE 323
           + +++    +++   ++GR +  + LL  M  K +  D   Y+++++   ++  I   + 
Sbjct: 268 APTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYL 327

Query: 324 VFEEMSKRGFQANSFIYTLLIGVHCRGGEVEEAHCLMQEMENMGLKPYSETFNLLIEGCA 383
           +  +M KR    N   Y  LI      G+V  A  L+ EM + GL P   TFN LI+G  
Sbjct: 328 LLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHI 387

Query: 384 ISGHSEE 389
             G+ +E
Sbjct: 388 SEGNFKE 391

[Close]
BLAST of IVF0015878 vs. TAIR 10
Match: AT5G40400.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 122.9 bits (307), Expect = 5.8e-28
Identity = 98/383 (25.59%), Postives = 168/383 (43.86%), Query Frame = 0 

Query: 14  SSSKISLCLSIRKLISTPVADDL---INDDATVNSICESFTRRQSWDALSR-----KFQF 73
           SSS +  C +I K I  P+ + L    N    V+ IC +         L       K   
Sbjct: 15  SSSIVPRCSNIPKPILNPLYNLLPQSQNPSKIVDVICSTLNHSDYSVLLPNLRDEVKSLI 74

Query: 74  LELNDLLVQKVLLKFQQPVDAKLALGFFHW----SAKRKNFNHGSQSYGIMIHILVKARL 133
             L    + +VLL+FQ   DA  A+ FF W      KR N      +Y +++HILV ++ 
Sbjct: 75  PHLGYPEISRVLLRFQS--DASRAITFFKWVKFDLGKRPNVG----NYCLLLHILVSSKK 134

Query: 134 VLDARALLQSILKKNEGNSFDYSVVDSLLDSYKVTGSSPFVFDLLVQTCAKLRLIDFALC 193
              A   L  +++       +  V   L+ +       P VFD+LV+   KL L++    
Sbjct: 135 FPLAMQFLCELIELTSKKE-EVDVFRVLVSATDECNWDPVVFDMLVKGYLKLGLVEEGFR 194

Query: 194 FCSHLEERGFSLSLISFNTLIHVLEKSDENRKVWKIYEQMIGKRVYPNAITVRIMINSLC 253
               + + GFS+S+++ N L++ L K D     W++Y  M    ++PN  T  I+ N  C
Sbjct: 195 VFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVMCRVGIHPNTYTFNILTNVFC 254

Query: 254 KEGKLQETSDMLNRIHGSRCSASLIVNACLIYRILEEGRVEDGVMLLKRMLQKNMVLDDI 313
            +   +E  D L ++        L+    L+      GR+++   L K M ++ +V D +
Sbjct: 255 NDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLV 314

Query: 314 AYSLIVYAKVKTGSITSTWEVFEEMSKRGFQANSFIYTLLIGVHCRGGEVEEAHCLMQEM 373
            Y+ ++    K G +    + F  M  RG + +   Y  LI  +C+ G ++++  L+ EM
Sbjct: 315 TYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEM 374

Query: 374 ENMGLKPYSETFNLLIEGCAISG 385
               + P   T  +++EG    G
Sbjct: 375 LGNSVVPDRFTCKVIVEGFVREG 390

[Close]
BLAST of IVF0015878 vs. TAIR 10
Match: AT5G39710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 122.5 bits (306), Expect = 7.6e-28
Identity = 82/311 (26.37%), Postives = 150/311 (48.23%), Query Frame = 0 

Query: 76  VLLKFQQPVDAKLALGFFHWSAKRKNFNHGSQSYGIMIHILVKARLVLDARALLQSILKK 135
           +LLK Q   D  L L F +W+   + F    +   I +HIL K +L   A+ L + +  K
Sbjct: 54  LLLKSQN--DQALILKFLNWANPHQFFTLRCKC--ITLHILTKFKLYKTAQILAEDVAAK 113

Query: 136 NEGNSFDYSVVDSLLDSYKVTGSSPFVFDLLVQTCAKLRLIDFALCFCSHLEERGFSLSL 195
              + +   V  SL ++Y +  S+  VFDL+V++ ++L LID AL      +  GF   +
Sbjct: 114 TLDDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGV 173

Query: 196 ISFNTLIHVLEKSDENRK-VWKIYEQMIGKRVYPNAITVRIMINSLCKEGKLQETSDMLN 255
           +S+N ++    +S  N      ++++M+  +V PN  T  I+I   C  G +     + +
Sbjct: 174 LSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFD 233

Query: 256 RIHGSRCSASLIVNACLIYRILEEGRVEDGVMLLKRMLQKNMVLDDIAYSLIVYAKVKTG 315
           ++    C  +++    LI    +  +++DG  LL+ M  K +  + I+Y++++    + G
Sbjct: 234 KMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREG 293

Query: 316 SITSTWEVFEEMSKRGFQANSFIYTLLIGVHCRGGEVEEAHCLMQEMENMGLKPYSETFN 375
            +     V  EM++RG+  +   Y  LI  +C+ G   +A  +  EM   GL P   T+ 
Sbjct: 294 RMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYT 353

Query: 376 LLIEGCAISGH 386
            LI     +G+
Sbjct: 354 SLIHSMCKAGN 360

[Close]
BLAST of IVF0015878 vs. TAIR 10
Match: AT2G02150.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 122.1 bits (305), Expect = 9.9e-28
Identity = 97/336 (28.87%), Postives = 150/336 (44.64%), Query Frame = 0 

Query: 56  WD--ALSRKFQFLELNDLLVQKVLLKFQQPVDAKLALGFFHWSAKRKNFNHGSQSYGIMI 115
           WD   L + F  L L  + V +VL++ ++  D KLA  FF WS  R  F H  +SY I+ 
Sbjct: 93  WDDPGLEKLFD-LTLAPIWVPRVLVELKE--DPKLAFKFFKWSMTRNGFKHSVESYCIVA 152

Query: 116 HILVKARLVLDARALLQSILKKNEGNSFDYSVVDSLLDSYKVTGSSPFVFDLLVQTCAKL 175
           HIL  AR+  DA     S+LK+   +  D  V D L  +  V      VFD L      L
Sbjct: 153 HILFCARMYYDA----NSVLKEMVLSKADCDVFDVLWSTRNVCVPGFGVFDALFSVLIDL 212

Query: 176 RLIDFAL-CFCSHLEERGFSLSLISFNTLIHVLEKSDENRKVWKIYEQMIGKRVYPNAIT 235
            +++ A+ CF      R F  +  S N L+H   K  +   V + ++ MIG    P   T
Sbjct: 213 GMLEEAIQCFSKMKRFRVFPKTR-SCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFT 272

Query: 236 VRIMINSLCKEGKLQETSDMLNRIHGSRCSASLIVNACLIYRILEEGRVEDGVMLLKRML 295
             IMI+ +CKEG ++    +   +         +    +I    + GR++D V   + M 
Sbjct: 273 YNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMK 332

Query: 296 QKNMVLDDIAYSLIVYAKVKTGSITSTWEVFEEMSKRGFQANSFIYTLLIGVHCRGGEVE 355
                 D I Y+ ++    K G +    E + EM   G + N   Y+ L+   C+ G ++
Sbjct: 333 DMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQ 392

Query: 356 EAHCLMQEMENMGLKPYSETFNLLIE-GCAISGHSE 388
           +A     +M  +GL P   T+  LI+  C I   S+
Sbjct: 393 QAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSD 420

The following BLAST results are available for this feature:
BLAST of IVF0015878 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q3ECH59.2e-9550.58Pentatricopeptide repeat-containing protein At1g66345, mitochondrial OS=Arabidop... [more]
Q9LVQ52.5e-3128.01Pentatricopeptide repeat-containing protein At5g55840 OS=Arabidopsis thaliana OX... [more]
Q9FND88.2e-2725.59Pentatricopeptide repeat-containing protein At5g40400 OS=Arabidopsis thaliana OX... [more]
Q9FIX31.1e-2626.37Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX... [more]
P0C8941.4e-2628.87Putative pentatricopeptide repeat-containing protein At2g02150 OS=Arabidopsis th... [more]
BLAST of IVF0015878 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3DTQ82.9e-216100.00Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3CCN82.9e-216100.00pentatricopeptide repeat-containing protein At1g66345, mitochondrial OS=Cucumis ... [more]
A0A0A0KRP71.5e-20193.57Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G423870 PE=4 SV=1[more]
A0A6J1HAX56.2e-17983.68pentatricopeptide repeat-containing protein At1g66345, mitochondrial OS=Cucurbit... [more]
A0A6J1JRQ44.2e-17582.52pentatricopeptide repeat-containing protein At1g66345, mitochondrial OS=Cucurbit... [more]
BLAST of IVF0015878 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008460528.14.61e-272100.00PREDICTED: pentatricopeptide repeat-containing protein At1g66345, mitochondrial ... [more]
XP_031740872.19.52e-25393.57pentatricopeptide repeat-containing protein At1g66345, mitochondrial [Cucumis sa... [more]
XP_038875410.18.01e-23888.66pentatricopeptide repeat-containing protein At1g66345, mitochondrial [Benincasa ... [more]
XP_023550461.19.99e-22483.94pentatricopeptide repeat-containing protein At1g66345, mitochondrial [Cucurbita ... [more]
XP_022961108.14.05e-22383.68pentatricopeptide repeat-containing protein At1g66345, mitochondrial [Cucurbita ... [more]
BLAST of IVF0015878 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G66345.16.5e-9650.58Pentatricopeptide repeat (PPR) superfamily protein [more]
AT5G55840.11.7e-3228.01Pentatricopeptide repeat (PPR) superfamily protein [more]
AT5G40400.15.8e-2825.59Pentatricopeptide repeat (PPR) superfamily protein [more]
AT5G39710.17.6e-2826.37Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT2G02150.19.9e-2828.87Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 334..381
e-value: 6.1E-10
score: 39.2
coord: 196..242
e-value: 1.6E-10
score: 41.0
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 108..136
e-value: 0.35
score: 11.2
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 196..230
e-value: 0.002
score: 16.2
coord: 232..263
e-value: 5.4E-4
score: 18.0
coord: 337..368
e-value: 1.1E-6
score: 26.4
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 299..333
score: 9.185627
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 194..228
score: 9.04313
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 334..368
score: 11.816339
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 38..154
e-value: 3.0E-6
score: 28.7
coord: 155..256
e-value: 1.1E-15
score: 59.4
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 276..389
e-value: 2.9E-24
score: 88.0
NoneNo IPR availablePANTHERPTHR45613PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 1..388
NoneNo IPR availablePANTHERPTHR45613:SF248PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN MITOCHONDRIALcoord: 1..388

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0015878.4IVF0015878.4mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006396 RNA processing
molecular_function GO:0005515 protein binding