IVF0015851 (gene) Melon (IVF77) v1

Overview
NameIVF0015851
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Locationchr05: 2451726 .. 2452357 (+)
RNA-Seq ExpressionIVF0015851
SyntenyIVF0015851
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTGAGTTGGCGCTTTGCAAATTGGTCCATAGAGGCGAAAGCAAAGATGTTTAGATTCCAACATAATTTCACTTCGCTCCCAAAACCCAAAAATCGCGCCTTTCAAAAACAAAAAATCTCCCTCTTCTTCTCCGACCAAAATTTTCATTTTCATTTTCACCTTCAAATTCCAAATTCCTTCAAATCCAAAACCCCCAATCTTCAAAGCAAAAATGTTTCCCTTTTCAATTCCCACCAGAATCTCTCCCATTTTTCATCCTCACTATAAACACCCATTTTCCCCTTTCCTCTCCCAACCCGGCTTCACTTCTCATTCTCATTCCTTCTTCCTCGTCTTCCATGGAGTTTGCCGCCGTCCGTTTCCATTCCGATAAGGAAAACCTCCCCCCGTTTACCCATAAGTTACACCCTTCAATTCCAAAGAAACCCATCATACGAAGGAGATTAAATCGGAAGCCGCTTCAAGATATAACCAATTCATTTGAAAATACTATTCGATTCGGTTCGATTCAAGATGGATTTATCGCCTCGGTTGAATCGGTTTGTTTGCAGTCAAATTCCAGGAAGAGGAAAGCTGTGGATGAAGTTTTTTCTGGAACTGCCAAATCGCTCAGAATGGGATTCAGATAA

mRNA sequence

ATGCTGAGTTGGCGCTTTGCAAATTGGTCCATAGAGGCGAAAGCAAAGATGTTTAGATTCCAACATAATTTCACTTCGCTCCCAAAACCCAAAAATCAATCTCTCCCATTTTTCATCCTCACTATAAACACCCATTTTCCCCTTTCCTCTCCCAACCCGGCTTCACTTCTCATTCTCATTCCTTCTTCCTCGTCTTCCATGGAGTTTGCCGCCGTCCGTTTCCATTCCGATAAGGAAAACCTCCCCCCGTTTACCCATAAGTTACACCCTTCAATTCCAAAGAAACCCATCATACGAAGGAGATTAAATCGGAAGCCGCTTCAAGATATAACCAATTCATTTGAAAATACTATTCGATTCGGTTCGATTCAAGATGGATTTATCGCCTCGGTTGAATCGGTTTGTTTGCAGTCAAATTCCAGGAAGAGGAAAGCTGTGGATGAAGTTTTTTCTGGAACTGCCAAATCGCTCAGAATGGGATTCAGATAA

Coding sequence (CDS)

ATGCTGAGTTGGCGCTTTGCAAATTGGTCCATAGAGGCGAAAGCAAAGATGTTTAGATTCCAACATAATTTCACTTCGCTCCCAAAACCCAAAAATCAATCTCTCCCATTTTTCATCCTCACTATAAACACCCATTTTCCCCTTTCCTCTCCCAACCCGGCTTCACTTCTCATTCTCATTCCTTCTTCCTCGTCTTCCATGGAGTTTGCCGCCGTCCGTTTCCATTCCGATAAGGAAAACCTCCCCCCGTTTACCCATAAGTTACACCCTTCAATTCCAAAGAAACCCATCATACGAAGGAGATTAAATCGGAAGCCGCTTCAAGATATAACCAATTCATTTGAAAATACTATTCGATTCGGTTCGATTCAAGATGGATTTATCGCCTCGGTTGAATCGGTTTGTTTGCAGTCAAATTCCAGGAAGAGGAAAGCTGTGGATGAAGTTTTTTCTGGAACTGCCAAATCGCTCAGAATGGGATTCAGATAA

Protein sequence

MLSWRFANWSIEAKAKMFRFQHNFTSLPKPKNQSLPFFILTINTHFPLSSPNPASLLILIPSSSSSMEFAAVRFHSDKENLPPFTHKLHPSIPKKPIIRRRLNRKPLQDITNSFENTIRFGSIQDGFIASVESVCLQSNSRKRKAVDEVFSGTAKSLRMGFR
Homology
BLAST of IVF0015851 vs. ExPASy TrEMBL
Match: A0A0A0KE31 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G419520 PE=4 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 4.3e-57
Identity = 128/164 (78.05%), Postives = 134/164 (81.71%), Query Frame = 0

Query: 1   MLSWRFANWSIEAKAKMFRFQHNFTSLPKPKNQSLPFFILTINTHFPLSSPNPASLLIL- 60
           MLSW  A   I  K +  +    F S      QSLPFFILTINTHFPLSSP+ ASLLIL 
Sbjct: 1   MLSWHIA---IGPKRRKEKSPRKFKS-----QQSLPFFILTINTHFPLSSPDSASLLILT 60

Query: 61  -IPSSSSSMEFAAVRFHSDKENLPPFTHKLHPSIPKKPIIRRRLNRKPLQDITNSFENTI 120
            IPSS SSMEF+AVRFHSDKENLPPFTHKL+PSIPKKP IRRRLNRKPL DITNSFENTI
Sbjct: 61  PIPSSPSSMEFSAVRFHSDKENLPPFTHKLYPSIPKKPTIRRRLNRKPLLDITNSFENTI 120

Query: 121 RFGSIQDGFIASVESVCLQSNSRKRKAVDEVFSGTAKSLRMGFR 163
           R GSIQDGFIASVESVCLQ NSRKRKA DEV+SGTAKSLRMGFR
Sbjct: 121 RLGSIQDGFIASVESVCLQPNSRKRKAGDEVYSGTAKSLRMGFR 156

BLAST of IVF0015851 vs. ExPASy TrEMBL
Match: A0A1Q3C6Z4 (Uncharacterized protein (Fragment) OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_19465 PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 6.9e-07
Identity = 48/114 (42.11%), Postives = 62/114 (54.39%), Query Frame = 0

Query: 60  IPSSSSSMEFAAVRFHSDKENLPPFTHKL-------HPSIPKKPIIRRRLNRKPLQDITN 119
           I   +S ME   +  + +KEN+PPF+ K         PS  K P  +RR  RKPL DITN
Sbjct: 1   ISKLTSPMEAITLSDNYNKENIPPFSPKQANPVPVNAPSFKKIPTCKRRF-RKPLADITN 60

Query: 120 SFENTIRFGSIQDGFIASVE----SVCLQSNSRKRKAVDEVFSGTAKSLRMGFR 163
            F N++   S Q+     +     SVC   N+RKRKAV    S ++KSLRMGFR
Sbjct: 61  LFNNSVSSSSTQESISLLLSSPPVSVC-APNARKRKAVG---SSSSKSLRMGFR 109

BLAST of IVF0015851 vs. ExPASy TrEMBL
Match: A0A6J5UAF7 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS20443 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 1.3e-05
Identity = 51/120 (42.50%), Postives = 62/120 (51.67%), Query Frame = 0

Query: 67  MEFAAVRFHSDKENLPPFTHKLHPSIP--------KKPIIRRRLNRKPLQDITN--SFEN 126
           ME +A R+HS+KENLPP +   + + P        KK   + RL RKPL DITN   + N
Sbjct: 1   MEASACRYHSNKENLPPSSAMANLTNPVPENGSSSKKCNKKTRLRRKPLADITNLYIYGN 60

Query: 127 TIRFG------SIQDGFIASVESVC-LQSNSRKRKAVDE-------VFSGTAKSLRMGFR 163
              FG      S    F +S  SV    SNSRKRK+  E       V S  +KSLRMGFR
Sbjct: 61  QSSFGLSDHLPSATLPFSSSSSSVSGSASNSRKRKSTQEDNTNSSKVNSSNSKSLRMGFR 120

BLAST of IVF0015851 vs. ExPASy TrEMBL
Match: A0A2K3JL70 (Uncharacterized protein OS=Trifolium pratense OX=57577 GN=L195_g048400 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 2.2e-05
Identity = 39/103 (37.86%), Postives = 58/103 (56.31%), Query Frame = 0

Query: 67  MEFAAVRFHSDKENLPPFTHKLHPSIP---KKPIIRRRLNRKPLQDITNSFENTIRFGSI 126
           M+ + +   ++KEN+PP      P I    KK    R++ R PL DITN F+N+  F   
Sbjct: 1   MKISTMSIQTNKENIPPVNKNSIPLIASSFKKNSSNRKIKRIPLADITNLFQNSSPFTMT 60

Query: 127 QDG-FIASV---ESVCLQSNSRKRKAVDEVFSGTAKSLRMGFR 163
            +G  ++SV    S+ L+SNSR+R  V    +  +K+LRMGFR
Sbjct: 61  PEGNGVSSVLPSASILLRSNSRRRTLVVVAQATVSKTLRMGFR 103

BLAST of IVF0015851 vs. ExPASy TrEMBL
Match: A0A2C9URL6 (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_13G138400 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 2.9e-05
Identity = 43/111 (38.74%), Postives = 62/111 (55.86%), Query Frame = 0

Query: 67  MEFAA--VRFHSDKENLPPFTHKLHPSIP-----KKPIIRRRLNRKPLQDITNSFENTIR 126
           MEF A     HS+KEN+PPF+ K    IP      K   RRR+ R+PL+DIT  + ++++
Sbjct: 1   MEFTAKLCDHHSNKENIPPFSAKPANPIPASVASSKKKFRRRI-REPLEDITYFYRSSVQ 60

Query: 127 FGSIQ-DGFIASVESVCLQSNSRKRKAVDE-------VFSGTAKSLRMGFR 163
               Q D  ++++      SNS+KRKA D+       V   ++KSLR GFR
Sbjct: 61  LALAQEDDSLSAISVSGSASNSKKRKASDQENEDTGAVAGPSSKSLRFGFR 110

BLAST of IVF0015851 vs. NCBI nr
Match: KGN47955.1 (hypothetical protein Csa_002785 [Cucumis sativus])

HSP 1 Score: 230 bits (586), Expect = 1.42e-74
Identity = 128/164 (78.05%), Postives = 134/164 (81.71%), Query Frame = 0

Query: 1   MLSWRFANWSIEAKAKMFRFQHNFTSLPKPKNQSLPFFILTINTHFPLSSPNPASLLIL- 60
           MLSW  A   I  K +  +    F S      QSLPFFILTINTHFPLSSP+ ASLLIL 
Sbjct: 1   MLSWHIA---IGPKRRKEKSPRKFKS-----QQSLPFFILTINTHFPLSSPDSASLLILT 60

Query: 61  -IPSSSSSMEFAAVRFHSDKENLPPFTHKLHPSIPKKPIIRRRLNRKPLQDITNSFENTI 120
            IPSS SSMEF+AVRFHSDKENLPPFTHKL+PSIPKKP IRRRLNRKPL DITNSFENTI
Sbjct: 61  PIPSSPSSMEFSAVRFHSDKENLPPFTHKLYPSIPKKPTIRRRLNRKPLLDITNSFENTI 120

Query: 121 RFGSIQDGFIASVESVCLQSNSRKRKAVDEVFSGTAKSLRMGFR 162
           R GSIQDGFIASVESVCLQ NSRKRKA DEV+SGTAKSLRMGFR
Sbjct: 121 RLGSIQDGFIASVESVCLQPNSRKRKAGDEVYSGTAKSLRMGFR 156

BLAST of IVF0015851 vs. NCBI nr
Match: KAG6589263.1 (hypothetical protein SDJN03_17828, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 127 bits (319), Expect = 8.34e-35
Identity = 68/96 (70.83%), Postives = 75/96 (78.12%), Query Frame = 0

Query: 67  MEFAAVRFHSDKENLPPFTHKLHPSIPKKPIIRRRLNRKPLQDITNSFENTIRFGSIQDG 126
           MEFAAVRF S KENLP  + K  P   KKPI RRRLNRKPL DITNSFE+++RF  +QD 
Sbjct: 1   MEFAAVRFPSGKENLPLLSQKQFPPNQKKPITRRRLNRKPLADITNSFESSVRFSFVQD- 60

Query: 127 FIASVESVCLQSNSRKRKAVDEVFSGTAKSLRMGFR 162
              SVESVCLQ NS+KRKA DE+ SGTAKSLRMGFR
Sbjct: 61  HSGSVESVCLQLNSKKRKAADEICSGTAKSLRMGFR 95

BLAST of IVF0015851 vs. NCBI nr
Match: GAV75989.1 (hypothetical protein CFOL_v3_19465, partial [Cephalotus follicularis])

HSP 1 Score: 64.3 bits (155), Expect = 5.98e-10
Identity = 48/114 (42.11%), Postives = 62/114 (54.39%), Query Frame = 0

Query: 60  IPSSSSSMEFAAVRFHSDKENLPPFTHKLH-------PSIPKKPIIRRRLNRKPLQDITN 119
           I   +S ME   +  + +KEN+PPF+ K         PS  K P  +RR  RKPL DITN
Sbjct: 1   ISKLTSPMEAITLSDNYNKENIPPFSPKQANPVPVNAPSFKKIPTCKRRF-RKPLADITN 60

Query: 120 SFENTIRFGSIQDGFIASVES----VCLQSNSRKRKAVDEVFSGTAKSLRMGFR 162
            F N++   S Q+     + S    VC   N+RKRKAV    S ++KSLRMGFR
Sbjct: 61  LFNNSVSSSSTQESISLLLSSPPVSVCAP-NARKRKAVG---SSSSKSLRMGFR 109

BLAST of IVF0015851 vs. NCBI nr
Match: KAG5545157.1 (hypothetical protein RHGRI_017584 [Rhododendron griersonianum])

HSP 1 Score: 59.3 bits (142), Expect = 4.73e-08
Identity = 42/99 (42.42%), Postives = 58/99 (58.59%), Query Frame = 0

Query: 75  HSDKENLPPFT-HKLHPSIP-----KKPIIRRRLNRKPLQDITNSFENTIRFGSIQD--G 134
           H+DKEN+PPF  +++HP+ P          +RRL R+PL+DIT+ F + I+  S QD  G
Sbjct: 10  HNDKENIPPFAQNQIHPAPPLVQTCSAKNAKRRL-RRPLRDITHLFNSQIQSNSAQDTTG 69

Query: 135 FIASVESVCLQSNSRKRKAVDEVFSG---TAKSLRMGFR 162
           F           N RKRKA+D++ S     +KSLRM FR
Sbjct: 70  FQLPSPVPAPALNFRKRKAIDDIDSMHQMNSKSLRMNFR 107

BLAST of IVF0015851 vs. NCBI nr
Match: CAB4273203.1 (unnamed protein product [Prunus armeniaca])

HSP 1 Score: 58.9 bits (141), Expect = 8.91e-08
Identity = 51/120 (42.50%), Postives = 62/120 (51.67%), Query Frame = 0

Query: 67  MEFAAVRFHSDKENLPPFTHKLHPSIP--------KKPIIRRRLNRKPLQDITNSF--EN 126
           ME +A R+HS+KENLPP +   + + P        KK   + RL RKPL DITN +   N
Sbjct: 1   MEASACRYHSNKENLPPSSAMANLTNPVPENGSSSKKCNKKTRLRRKPLADITNLYIYGN 60

Query: 127 TIRFG------SIQDGFIASVESVC-LQSNSRKRKAVDE-------VFSGTAKSLRMGFR 162
              FG      S    F +S  SV    SNSRKRK+  E       V S  +KSLRMGFR
Sbjct: 61  QSSFGLSDHLPSATLPFSSSSSSVSGSASNSRKRKSTQEDNTNSSKVNSSNSKSLRMGFR 120

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KE314.3e-5778.05Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G419520 PE=4 SV=1[more]
A0A1Q3C6Z46.9e-0742.11Uncharacterized protein (Fragment) OS=Cephalotus follicularis OX=3775 GN=CFOL_v3... [more]
A0A6J5UAF71.3e-0542.50Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS20443 PE=4 S... [more]
A0A2K3JL702.2e-0537.86Uncharacterized protein OS=Trifolium pratense OX=57577 GN=L195_g048400 PE=4 SV=1[more]
A0A2C9URL62.9e-0538.74Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_13G138400 PE=4 SV=... [more]
Match NameE-valueIdentityDescription
KGN47955.11.42e-7478.05hypothetical protein Csa_002785 [Cucumis sativus][more]
KAG6589263.18.34e-3570.83hypothetical protein SDJN03_17828, partial [Cucurbita argyrosperma subsp. sorori... [more]
GAV75989.15.98e-1042.11hypothetical protein CFOL_v3_19465, partial [Cephalotus follicularis][more]
KAG5545157.14.73e-0842.42hypothetical protein RHGRI_017584 [Rhododendron griersonianum][more]
CAB4273203.18.91e-0842.50unnamed protein product [Prunus armeniaca][more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0015851.1IVF0015851.1mRNA