IVF0015804 (gene) Melon (IVF77) v1

Overview


Name	IVF0015804
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Protein SPIRAL1-like 1
Location	chr03: 22015918 .. 22018199 (+)
RNA-Seq Expression	IVF0015804
Synteny	IVF0015804

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATAAATAATTGGAAGAGAGTATCTCCGAGACTGCGTGCTTGCTACGACTACACACCACTCTCTCCACTCTCATTTCTTCCTTCCTTCCCTTTTAACTCCGAAGTTCGCCTCAGATCCCATCGTCGCCCCAGGTTTGCTCCTTAAATTCATTCCTTTTCTCTTAGATCTTCTCTTTAACTTTCGTTTTTCCTCTTTTTAACCCACAATCCACCATTGTTTTTCCCTCATTTTCATCTTCCTTCATCATCTACCGTTGTTTTATCGCATTCCTTATCTAGATCTACTACTTGATTCTTTCTCTTTTTTTTACCGCCGGGTTTTCCTGTTTCTCCCTCCCGGTACCTCTCAATTGCTGCAACTATCAGATCTTGTTTGTTTCGCATCTTTGTTTTTGTTATTTTCTGACTGTGCTTAAGGGTTTTGCAGGATCTGTGGTATATGCCTACATTTTAACTGTTTCTTACTTTTAGGTCAAGTGATCGGTTTTTGAGATGGGTTTTTAGGGTAGAACTTAGTACTCAGCTCAGCTGGAATATTCTTCTTGTGTTCCTGTGTGGGTTTTTGACTGTAAACAAATCAAATCAAATCACTGTATGGGATTAACGTAACTGGTAGTTTTGTGTTTTGAAATTGATGCTATTGTTAATGGCTTCATGTGTCTTATGTTCCGTTTTTCAATGTCTTGTTTGTCTTGGTATAATTTTTTTCTTTTTGTTTGGAGATCTATTGCTCTTACTATATCTTCTTTAATTTGAACACGACAGCTTTAGGCCTTGTTAGTATCTTCTTGATTCAGGTTGGGATTTATTTATTTATTTAGATGGCAATCTTTACCACAGAAACATGTCTGGTGGCTATTTTTTCCAAAAAAAAATTATATATCATACCGTCGTAAAAGAAAATTATTCTTATCTCCAACCTAACCGTTGAAAGTATGACTCGTTAGATACCAAAGTTAAAAAAATCCTTGAACCGTTACAACTAAGGGAATTAACATGAAAACATGGATCGAGTATGATGTTCAAACATCAAGTTTGATGTTTTATTATAGTAGAGGTTTGATTTTTACATTTTAACTCGAGATATAAAATTTCTTTTGATACTTGATAGGACTATATGCAATATATGAGATCCTTCAGCCAGCGATTTCCACTCATTTATGTTCCGAGTCTTCTGACCTTTATTATTATTCTTTTTCCTGGTTGTAAGGCAAGCTTCTGAGTTGTGACATTTCAAAGAAACCGAAGAGCCATGGGGGGTCGTGGAGTTAGCAGTGGTGGGGGGCAGAGCTCACTGGGGTACCTGTTTGGTGATGGAGATGCTCCTAATGCAGGTGCACCAAAAGGTGGCCGCCAAGCACCGCCGCCTTCAAATGAAGGGAAGACTGTATCCAAACCAGCAGTGTCTAAACCTGCTGCTACTGCTTCACCACCTGCAGATATTACCAAGCAGATTCCAGCTGGTATTCACAGTAGCTCATCAAACAACTATTTGAGGGCAGATGGTCAGAACACTGGCAATTTCATAACGGTATAGCTACCCTTTATGATTATTCTGCTATTTATTTGGTCTAATTTGACTGCTAGCATGTTGCCGATAATTGATACATATATAATCTTGGATTAGGATCGATATTGCACCTATTTAGCTTAGCTTACGATAGGGCAATCAAAGTTGGCTTGGATTAGATGTGTATTGCACCTATTTATCTTGTCTCGTCTTCCTCTTTCTACCCATCTTTGAATTGTACGATCCAAAAACAGCACCCAAACGGGCATGTGCAAAAGAGGATTGTATTGTACTGATATTTTGCCAAAAATGGAACCACGATATGCCTTGATATGATATAAATCAAAAAGGGGACTATAGTGACTGATTAGCTGTTTGTGGTTGGTGCAGGATCGGCCTTCAACCAAGGTTCACGCCGCCCCGGGCGGGGGATCTTCTCTGGATTATCTGTTTGGTGGTGCTGGTGGAAAATGAAACCTGCAAATCAGAACTAAATAGAGCTATTTGACGATCCATTTTATGTGAATTTTTATATCATGTCGAAGGGGCAATGTTTTTTTCTTTTCTTTTCTTTTCTTCCATCTGAAACGATACTATGGCGGGACTATATGCTTTTCGATGTAATGTGTAGATGCTTATGGTTTCTGCTCTCTGTTCTTGGGTTTTATTCGGTCAAAATTTTATTTTGGATTCATGAAAAGCTGTTGTGAGCTATCTGTGTCTGTCAAGGATCTTTCTTACAAGTAATGCATAAACTCTCTTTTATCTTCA

mRNA sequence

AAATAAATAATTGGAAGAGAGTATCTCCGAGACTGCGTGCTTGCTACGACTACACACCACTCTCTCCACTCTCATTTCTTCCTTCCTTCCCTTTTAACTCCGAAGTTCGCCTCAGATCCCATCGTCGCCCCAGGTTTGCTCCTTAAATTCATTCCTTTTCTCTTAGATCTTCTCTTTAACTTTCGTTTTTCCTCTTTTTAACCCACAATCCACCATTGTTTTTCCCTCATTTTCATCTTCCTTCATCATCTACCGTTGTTTTATCGCATTCCTTATCTAGATCTACTACTTGATTCTTTCTCTTTTTTTTACCGCCGGGTTTTCCTGTTTCTCCCTCCCGGCAAGCTTCTGAGTTGTGACATTTCAAAGAAACCGAAGAGCCATGGGGGGTCGTGGAGTTAGCAGTGGTGGGGGGCAGAGCTCACTGGGGTACCTGTTTGGTGATGGAGATGCTCCTAATGCAGGTGCACCAAAAGGTGGCCGCCAAGCACCGCCGCCTTCAAATGAAGGGAAGACTGTATCCAAACCAGCAGTGTCTAAACCTGCTGCTACTGCTTCACCACCTGCAGATATTACCAAGCAGATTCCAGCTGGTATTCACAGTAGCTCATCAAACAACTATTTGAGGGCAGATGGTCAGAACACTGGCAATTTCATAACGGATCGGCCTTCAACCAAGGTTCACGCCGCCCCGGGCGGGGGATCTTCTCTGGATTATCTGTTTGGTGGTGCTGGTGGAAAATGAAACCTGCAAATCAGAACTAAATAGAGCTATTTGACGATCCATTTTATGTGAATTTTTATATCATGTCGAAGGGGCAATGTTTTTTTCTTTTCTTTTCTTTTCTTCCATCTGAAACGATACTATGGCGGGACTATATGCTTTTCGATGTAATGTGTAGATGCTTATGGTTTCTGCTCTCTGTTCTTGGGTTTTATTCGGTCAAAATTTTATTTTGGATTCATGAAAAGCTGTTGTGAGCTATCTGTGTCTGTCAAGGATCTTTCTTACAAGTAATGCATAAACTCTCTTTTATCTTCA

Coding sequence (CDS)

ATGGGGGGTCGTGGAGTTAGCAGTGGTGGGGGGCAGAGCTCACTGGGGTACCTGTTTGGTGATGGAGATGCTCCTAATGCAGGTGCACCAAAAGGTGGCCGCCAAGCACCGCCGCCTTCAAATGAAGGGAAGACTGTATCCAAACCAGCAGTGTCTAAACCTGCTGCTACTGCTTCACCACCTGCAGATATTACCAAGCAGATTCCAGCTGGTATTCACAGTAGCTCATCAAACAACTATTTGAGGGCAGATGGTCAGAACACTGGCAATTTCATAACGGATCGGCCTTCAACCAAGGTTCACGCCGCCCCGGGCGGGGGATCTTCTCTGGATTATCTGTTTGGTGGTGCTGGTGGAAAATGA

Protein sequence

MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTVSKPAVSKPAATASPPADITKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK

Homology

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BLAST of IVF0015804 vs. ExPASy Swiss-Prot
Match: B3H4F1 (Protein SPIRAL1-like 1 OS=Arabidopsis thaliana OX=3702 GN=SP1L1 PE=2 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 2.9e-31
Identity = 77/116 (66.38%), Postives = 87/116 (75.00%), Query Frame = 0


Query: 3   GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTVSKPAVSKPAATASPPA 62
           GRGVS GGGQSSLGYLFG G+AP          AP PS+E   +S  A   P   A+   
Sbjct: 2   GRGVSVGGGQSSLGYLFGSGEAPKPAI----NNAPAPSSETLPIS--ADPSPKHVAAQTV 61

Query: 63  DITKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAG 119
           ++TKQIPAGI+ SS+NNY+RADGQNTGNF+TDRPSTKVHAAPGGGSSLDYLFGG G
Sbjct: 62  NVTKQIPAGINKSSTNNYIRADGQNTGNFLTDRPSTKVHAAPGGGSSLDYLFGGGG 111

[Close]

BLAST of IVF0015804 vs. ExPASy Swiss-Prot
Match: Q9LE54 (Protein SPIRAL1-like 2 OS=Arabidopsis thaliana OX=3702 GN=SP1L2 PE=2 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 1.9e-27
Identity = 70/114 (61.40%), Postives = 82/114 (71.93%), Query Frame = 0


Query: 3   GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTVSKPAVSKPAATASPPA 62
           GRGVS+GGGQSSLGYLFG G+AP   A        P   E    + P      A A+   
Sbjct: 2   GRGVSAGGGQSSLGYLFGSGEAPKLAAV----NKTPAETESSAHAPPT----QAAAANAV 61

Query: 63  DITKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGG 117
           D  KQ+PAG++S+S+NNY+RA+GQNTGNFITDRPSTKVH+APGGGSSLDYLFGG
Sbjct: 62  DSIKQVPAGLNSNSANNYMRAEGQNTGNFITDRPSTKVHSAPGGGSSLDYLFGG 107

[Close]

BLAST of IVF0015804 vs. ExPASy Swiss-Prot
Match: Q7Y1L9 (Protein SPIRAL1-like 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0417800 PE=3 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 7.4e-27
Identity = 75/115 (65.22%), Postives = 82/115 (71.30%), Query Frame = 0


Query: 4   RGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTVSKPAVSKPAATASP-PA 63
           RG S+GGGQSSLGYLFG  +AP   A      AP P+      +  AV+ PA   SP  A
Sbjct: 3   RGGSAGGGQSSLGYLFGGNEAPKPAAKPAPAAAPAPAPAPAPAA--AVAAPAEKPSPAKA 62

Query: 64  DITKQIPAGIHSS-SSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGG 117
           D TKQIPAGI  S S+NNY RADGQNTGNF+TDRPSTKVHAAPGGGSSL YLFGG
Sbjct: 63  DATKQIPAGIQGSRSNNNYHRADGQNTGNFLTDRPSTKVHAAPGGGSSLGYLFGG 115

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BLAST of IVF0015804 vs. ExPASy Swiss-Prot
Match: Q2QQ99 (Protein SPIRAL1-like 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0502000 PE=3 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 1.3e-26
Identity = 72/115 (62.61%), Postives = 82/115 (71.30%), Query Frame = 0


Query: 3   GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTVSKPA-VSKPAATASPP 62
           GRGVSSGGGQSSLGYLFG G+AP                  K+  KPA V KPA ++S  
Sbjct: 2   GRGVSSGGGQSSLGYLFGGGEAP------------------KSAEKPAPVQKPAPSSS-- 61

Query: 63  ADITKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGG 117
           A+  K+IPAGI SS +NNY+RA+GQN GNF+TDRPSTKV AAPGGGSSLDYLF G
Sbjct: 62  AEKLKEIPAGIQSSKANNYMRAEGQNCGNFLTDRPSTKVQAAPGGGSSLDYLFSG 96

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BLAST of IVF0015804 vs. ExPASy Swiss-Prot
Match: Q2R0W8 (Protein SPIRAL1-like 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os11g0629400 PE=3 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 1.8e-25
Identity = 70/116 (60.34%), Postives = 79/116 (68.10%), Query Frame = 0


Query: 3   GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTVSKPAVSKPAATASPP- 62
           GRGVSSGGGQSSLGYLFG G+   A   K     P  + E +T   P      A A+ P 
Sbjct: 4   GRGVSSGGGQSSLGYLFGGGETAPAAKAK-----PAAAAEKETTPAPVKKAAVAAAASPS 63

Query: 63  -ADITKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGG 117
            A+  K+IPAGI S+ +NNY RA GQN GNF+TDRPSTKVHAAPGGGSSL YLFGG
Sbjct: 64  AAEKMKEIPAGIQSTQANNYFRAQGQNCGNFLTDRPSTKVHAAPGGGSSLGYLFGG 114

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BLAST of IVF0015804 vs. ExPASy TrEMBL
Match: A0A1S3BCR3 (protein SPIRAL1-like 1 OS=Cucumis melo OX=3656 GN=LOC103488465 PE=3 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 4.1e-57
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 1   MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTVSKPAVSKPAATASP 60
           MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTVSKPAVSKPAATASP
Sbjct: 1   MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTVSKPAVSKPAATASP 60

Query: 61  PADITKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK 120
           PADITKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK
Sbjct: 61  PADITKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK 120

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BLAST of IVF0015804 vs. ExPASy TrEMBL
Match: A0A5A7VC71 (Protein SPIRAL1-like 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G00750 PE=3 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 4.1e-57
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 1   MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTVSKPAVSKPAATASP 60
           MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTVSKPAVSKPAATASP
Sbjct: 1   MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTVSKPAVSKPAATASP 60

Query: 61  PADITKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK 120
           PADITKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK
Sbjct: 61  PADITKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK 120

[Close]

BLAST of IVF0015804 vs. ExPASy TrEMBL
Match: A0A0A0KFN2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G366520 PE=3 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 1.1e-54
Identity = 115/120 (95.83%), Postives = 118/120 (98.33%), Query Frame = 0


Query: 1   MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTVSKPAVSKPAATASP 60
           MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPP +E KT+SKPAVSKPAATASP
Sbjct: 1   MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTISKPAVSKPAATASP 60

Query: 61  PADITKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK 120
           PADI+KQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK
Sbjct: 61  PADISKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK 120

[Close]

BLAST of IVF0015804 vs. ExPASy TrEMBL
Match: A0A6J1K972 (protein SPIRAL1-like 2 OS=Cucurbita maxima OX=3661 GN=LOC111492241 PE=3 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 2.4e-49
Identity = 109/118 (92.37%), Postives = 111/118 (94.07%), Query Frame = 0


Query: 3   GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTVSKPAVSKPAATASPPA 62
           GRGVSSGGGQSSLGYLFG G+APNAGAPKGG+   PPSNEGK VSKPA SKPAATASPPA
Sbjct: 2   GRGVSSGGGQSSLGYLFGSGEAPNAGAPKGGQ--APPSNEGKAVSKPAASKPAATASPPA 61

Query: 63  DITKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK 121
           D TKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK
Sbjct: 62  DATKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK 117

[Close]

BLAST of IVF0015804 vs. ExPASy TrEMBL
Match: A0A6J1HDG7 (protein SPIRAL1-like 2 OS=Cucurbita moschata OX=3662 GN=LOC111462521 PE=3 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 2.4e-49
Identity = 109/118 (92.37%), Postives = 111/118 (94.07%), Query Frame = 0


Query: 3   GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTVSKPAVSKPAATASPPA 62
           GRGVSSGGGQSSLGYLFG G+APNAGAPKGG+   PPSNEGK VSKPA SKPAATASPPA
Sbjct: 2   GRGVSSGGGQSSLGYLFGSGEAPNAGAPKGGQ--APPSNEGKAVSKPAASKPAATASPPA 61

Query: 63  DITKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK 121
           D TKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK
Sbjct: 62  DATKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK 117

[Close]

BLAST of IVF0015804 vs. NCBI nr
Match: XP_008445444.1 (PREDICTED: protein SPIRAL1-like 1 [Cucumis melo] >XP_008445446.1 PREDICTED: protein SPIRAL1-like 1 [Cucumis melo] >XP_008445447.1 PREDICTED: protein SPIRAL1-like 1 [Cucumis melo] >KAA0064770.1 protein SPIRAL1-like 1 [Cucumis melo var. makuwa])

HSP 1 Score: 231 bits (590), Expect = 1.94e-76
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 1   MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTVSKPAVSKPAATASP 60
           MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTVSKPAVSKPAATASP
Sbjct: 1   MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTVSKPAVSKPAATASP 60

Query: 61  PADITKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK 120
           PADITKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK
Sbjct: 61  PADITKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK 120

[Close]

BLAST of IVF0015804 vs. NCBI nr
Match: XP_038886245.1 (protein SPIRAL1-like 1 [Benincasa hispida])

HSP 1 Score: 229 bits (583), Expect = 2.26e-75
Identity = 118/120 (98.33%), Postives = 119/120 (99.17%), Query Frame = 0


Query: 1   MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTVSKPAVSKPAATASP 60
           MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPP NEGKTVSKPAVSKPAATASP
Sbjct: 1   MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPLNEGKTVSKPAVSKPAATASP 60

Query: 61  PADITKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK 120
           PAD+TKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK
Sbjct: 61  PADVTKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK 120

[Close]

BLAST of IVF0015804 vs. NCBI nr
Match: XP_004144171.1 (protein SPIRAL1-like 1 [Cucumis sativus] >XP_004144172.1 protein SPIRAL1-like 1 [Cucumis sativus] >XP_031743708.1 protein SPIRAL1-like 1 [Cucumis sativus] >KGN47654.1 hypothetical protein Csa_018315 [Cucumis sativus])

HSP 1 Score: 223 bits (569), Expect = 3.09e-73
Identity = 115/120 (95.83%), Postives = 118/120 (98.33%), Query Frame = 0


Query: 1   MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTVSKPAVSKPAATASP 60
           MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPP +E KT+SKPAVSKPAATASP
Sbjct: 1   MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTISKPAVSKPAATASP 60

Query: 61  PADITKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK 120
           PADI+KQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK
Sbjct: 61  PADISKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK 120

[Close]

BLAST of IVF0015804 vs. NCBI nr
Match: XP_022961880.1 (protein SPIRAL1-like 2 [Cucurbita moschata] >XP_022997295.1 protein SPIRAL1-like 2 [Cucurbita maxima] >XP_023546068.1 protein SPIRAL1-like 2 [Cucurbita pepo subsp. pepo] >KAG6598640.1 Protein SPIRAL1-like 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7029577.1 Protein SPIRAL1-like 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 206 bits (524), Expect = 2.05e-66
Identity = 109/118 (92.37%), Postives = 111/118 (94.07%), Query Frame = 0


Query: 3   GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTVSKPAVSKPAATASPPA 62
           GRGVSSGGGQSSLGYLFG G+APNAGAPKGG+   PPSNEGK VSKPA SKPAATASPPA
Sbjct: 2   GRGVSSGGGQSSLGYLFGSGEAPNAGAPKGGQA--PPSNEGKAVSKPAASKPAATASPPA 61

Query: 63  DITKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK 120
           D TKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK
Sbjct: 62  DATKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK 117

[Close]

BLAST of IVF0015804 vs. NCBI nr
Match: XP_022132002.1 (protein SPIRAL1-like 2 [Momordica charantia] >XP_022132003.1 protein SPIRAL1-like 2 [Momordica charantia])

HSP 1 Score: 195 bits (495), Expect = 5.95e-62
Identity = 108/124 (87.10%), Postives = 110/124 (88.71%), Query Frame = 0


Query: 3   GRGVSSGGGQSSLGYLFGDGDAPNAGA------PKGGRQAPPPSNEGKTVSKPAVSKPAA 62
           GRGVSSGGGQSSLGYLFG G+APNAGA      P GG QAPPPSNEGKTVSKP    PAA
Sbjct: 2   GRGVSSGGGQSSLGYLFGSGEAPNAGARAPARAPNGG-QAPPPSNEGKTVSKP----PAA 61

Query: 63  TASPPADITKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGG 120
            ASPPAD+TKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGG
Sbjct: 62  AASPPADVTKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGG 120

[Close]

BLAST of IVF0015804 vs. TAIR 10
Match: AT1G26355.1 (SPIRAL1-like1 )

HSP 1 Score: 136.0 bits (341), Expect = 2.0e-32
Identity = 77/116 (66.38%), Postives = 87/116 (75.00%), Query Frame = 0


Query: 3   GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTVSKPAVSKPAATASPPA 62
           GRGVS GGGQSSLGYLFG G+AP          AP PS+E   +S  A   P   A+   
Sbjct: 2   GRGVSVGGGQSSLGYLFGSGEAPKPAI----NNAPAPSSETLPIS--ADPSPKHVAAQTV 61

Query: 63  DITKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAG 119
           ++TKQIPAGI+ SS+NNY+RADGQNTGNF+TDRPSTKVHAAPGGGSSLDYLFGG G
Sbjct: 62  NVTKQIPAGINKSSTNNYIRADGQNTGNFLTDRPSTKVHAAPGGGSSLDYLFGGGG 111

[Close]

BLAST of IVF0015804 vs. TAIR 10
Match: AT1G69230.1 (SPIRAL1-like2 )

HSP 1 Score: 123.2 bits (308), Expect = 1.4e-28
Identity = 70/114 (61.40%), Postives = 82/114 (71.93%), Query Frame = 0


Query: 3   GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTVSKPAVSKPAATASPPA 62
           GRGVS+GGGQSSLGYLFG G+AP   A        P   E    + P      A A+   
Sbjct: 2   GRGVSAGGGQSSLGYLFGSGEAPKLAAV----NKTPAETESSAHAPPT----QAAAANAV 61

Query: 63  DITKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGG 117
           D  KQ+PAG++S+S+NNY+RA+GQNTGNFITDRPSTKVH+APGGGSSLDYLFGG
Sbjct: 62  DSIKQVPAGLNSNSANNYMRAEGQNTGNFITDRPSTKVHSAPGGGSSLDYLFGG 107

[Close]

BLAST of IVF0015804 vs. TAIR 10
Match: AT1G69230.2 (SPIRAL1-like2 )

HSP 1 Score: 123.2 bits (308), Expect = 1.4e-28
Identity = 70/114 (61.40%), Postives = 82/114 (71.93%), Query Frame = 0


Query: 3   GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTVSKPAVSKPAATASPPA 62
           GRGVS+GGGQSSLGYLFG G+AP   A        P   E    + P      A A+   
Sbjct: 2   GRGVSAGGGQSSLGYLFGSGEAPKLAAV----NKTPAETESSAHAPPT----QAAAANAV 61

Query: 63  DITKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGG 117
           D  KQ+PAG++S+S+NNY+RA+GQNTGNFITDRPSTKVH+APGGGSSLDYLFGG
Sbjct: 62  DSIKQVPAGLNSNSANNYMRAEGQNTGNFITDRPSTKVHSAPGGGSSLDYLFGG 107

[Close]

BLAST of IVF0015804 vs. TAIR 10
Match: AT2G03680.1 (spiral1 )

HSP 1 Score: 113.6 bits (283), Expect = 1.1e-25
Identity = 73/118 (61.86%), Postives = 80/118 (67.80%), Query Frame = 0


Query: 3   GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTVSKPAVSKPAATAS--- 62
           GRG S GGGQSSL YLFG GDAP        R AP  SN G      AV+  A T +   
Sbjct: 2   GRGNSCGGGQSSLDYLFG-GDAPAPKPVPAPRPAPTESNNGPAPPVTAVTATALTTATTS 61

Query: 63  -PPADITKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGG 117
             PA++ KQIPAGI  +  NNY RA+GQNTGNF+TDRPSTKVHAAPGGGSSLDYLF G
Sbjct: 62  VEPAELNKQIPAGI-KTPVNNYARAEGQNTGNFLTDRPSTKVHAAPGGGSSLDYLFTG 117

[Close]

BLAST of IVF0015804 vs. TAIR 10
Match: AT2G03680.2 (spiral1 )

HSP 1 Score: 113.6 bits (283), Expect = 1.1e-25
Identity = 73/118 (61.86%), Postives = 80/118 (67.80%), Query Frame = 0


Query: 3   GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTVSKPAVSKPAATAS--- 62
           GRG S GGGQSSL YLFG GDAP        R AP  SN G      AV+  A T +   
Sbjct: 2   GRGNSCGGGQSSLDYLFG-GDAPAPKPVPAPRPAPTESNNGPAPPVTAVTATALTTATTS 61

Query: 63  -PPADITKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGG 117
             PA++ KQIPAGI  +  NNY RA+GQNTGNF+TDRPSTKVHAAPGGGSSLDYLF G
Sbjct: 62  VEPAELNKQIPAGI-KTPVNNYARAEGQNTGNFLTDRPSTKVHAAPGGGSSLDYLFTG 117

The following BLAST results are available for this feature:

BLAST of IVF0015804 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B3H4F1	2.9e-31	66.38	Protein SPIRAL1-like 1 OS=Arabidopsis thaliana OX=3702 GN=SP1L1 PE=2 SV=1	[more]
Q9LE54	1.9e-27	61.40	Protein SPIRAL1-like 2 OS=Arabidopsis thaliana OX=3702 GN=SP1L2 PE=2 SV=1	[more]
Q7Y1L9	7.4e-27	65.22	Protein SPIRAL1-like 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0417800 ...	[more]
Q2QQ99	1.3e-26	62.61	Protein SPIRAL1-like 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0502000 ...	[more]
Q2R0W8	1.8e-25	60.34	Protein SPIRAL1-like 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os11g0629400 ...	[more]

BLAST of IVF0015804 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BCR3	4.1e-57	100.00	protein SPIRAL1-like 1 OS=Cucumis melo OX=3656 GN=LOC103488465 PE=3 SV=1	[more]
A0A5A7VC71	4.1e-57	100.00	Protein SPIRAL1-like 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold8...	[more]
A0A0A0KFN2	1.1e-54	95.83	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G366520 PE=3 SV=1	[more]
A0A6J1K972	2.4e-49	92.37	protein SPIRAL1-like 2 OS=Cucurbita maxima OX=3661 GN=LOC111492241 PE=3 SV=1	[more]
A0A6J1HDG7	2.4e-49	92.37	protein SPIRAL1-like 2 OS=Cucurbita moschata OX=3662 GN=LOC111462521 PE=3 SV=1	[more]

BLAST of IVF0015804 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008445444.1	1.94e-76	100.00	PREDICTED: protein SPIRAL1-like 1 [Cucumis melo] >XP_008445446.1 PREDICTED: prot...	[more]
XP_038886245.1	2.26e-75	98.33	protein SPIRAL1-like 1 [Benincasa hispida]	[more]
XP_004144171.1	3.09e-73	95.83	protein SPIRAL1-like 1 [Cucumis sativus] >XP_004144172.1 protein SPIRAL1-like 1 ...	[more]
XP_022961880.1	2.05e-66	92.37	protein SPIRAL1-like 2 [Cucurbita moschata] >XP_022997295.1 protein SPIRAL1-like...	[more]
XP_022132002.1	5.95e-62	87.10	protein SPIRAL1-like 2 [Momordica charantia] >XP_022132003.1 protein SPIRAL1-lik...	[more]

BLAST of IVF0015804 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G26355.1	2.0e-32	66.38	SPIRAL1-like1	[more]
AT1G69230.1	1.4e-28	61.40	SPIRAL1-like2	[more]
AT1G69230.2	1.4e-28	61.40	SPIRAL1-like2	[more]
AT2G03680.1	1.1e-25	61.86	spiral1	[more]
AT2G03680.2	1.1e-25	61.86	spiral1	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..120
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 69..95
None	No IPR available	PANTHER	PTHR33403:SF28	PROTEIN SPIRAL1-LIKE 2	coord: 3..118
IPR039613	Protein SPIRAL1-like	PANTHER	PTHR33403	SPR1	coord: 3..118

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0015804.2	IVF0015804.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043622	cortical microtubule organization
cellular_component	GO:0010005	cortical microtubule, transverse to long axis