IVF0015743 (gene) Melon (IVF77) v1

Overview


Name	IVF0015743
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Protein ROOT PRIMORDIUM DEFECTIVE 1
Location	chr07: 22256889 .. 22260056 (+)
RNA-Seq Expression	IVF0015743
Synteny	IVF0015743

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCATTCTTCAATAACTCGTTGACACCTCCTCTATTGCTATCGCGTCGGGTCTCAGCTCCTTCCTTACAAACCGCTCTTCAGTTCTTCGCAACTTTCAACAGGTTCGTCGATGTTCATTATCTTTTACATTACTTCTCATTTACAATCTCATGCTATGCTACTTTGCGTTTTAAACTTTGTTTACGCATTCATCTTGTAGCTGTGTCTAAAATCATTTACTTCGCTAGATTTATGTTAGGAGATGGATACTAAAAGTGGGTTTGTTTCACTTTTTCTTTTTCTTCTTTTAAATTAATTGTTGTGCTTGCCTGAGAGGTGTTTGATGTTTGGATCGAGAATAATGGTGTTAGTGCTTGAGGAAATCGGCGTTTGGTTTTGTGAATTTTAGAATACCAACAGTTATGGAAAGAAAGTGAACAGTGTGGAATAGGAAGTGGGTTTGCATTATATTTACGTTAATAGGGAAGGAAATTGATTGCTGTGGTTGGGATTTGCTAATTTGCTATCGTGATTTAATCTAACCCCAGGGAAAAGGGCAAAAGAAAACGAGATAAAATGGAGTAATGATTTGATCACTGAACTTTTCTGAGGTCGACACTTTTACTTTGTTCTATGGTTTACTCTTATTACCCATGTAACTGAAAAGAAGTTTTCTAAGAGAAGGATATCTGAAGAGATTTCCTCCTCATATCATACTCTTTAAAACCTGAAATTTTGAAGTCCTAAGAAGAATCTGTAGACGAAAAAGAAGTCTTGGTTTTACTATTTTCTGTTTACTCTCTCCCATGACGCCCAACAATTTCTTTCATTTATTTGCCATATAGTTCATTATGAATTCAAGAAGATGAAAATTTTAGGCATTCTATTGTGAATATTCTGCTTTTGTTTATTTACATTTCAGTATTTTACTATCGAAATGATTTTCTGGACTCTGCTGCACGTTGATATTTTTTCTATTCAGAATTTTCACTTTGTACAAGTCTATAAAGTATAAATACCGTGGGACCATAAACTGTACTGAAATGTTAACTAAATGCAATTTATGTTCTGCAGGTGGTAAACAACCTGAAGATAATTGCTTGCAGTTTAATCTGTTGTGCCAGACAGTAGCATCCCCCATCTGATGCTTTTGAGTCAGAGTTGGAAGAAGGATATGTATCATCTTCTTTAGATTAATTTGATGAATCTGTTTACCTATTGTAATCTAAAAGGCCTTCCATTTATACAAAACTGAAAATGGCTTTATCTTCTCATTTCTTGACCCCTGCGGATTGGCATGCATCCCTTAGTTCAAACCTCCTCAGCGGCAGTCCTTTGTGGTTGCATTCCAAAGTCGACTTGAAGTGTCAAAGAAAAGAAAATTTCATAACTCATTATACTTTGACTCCTTGTTCCTCTATCAAGATTGTTCGCAGTCGTTCATTAGATCGGCATGCTGTAAAACATAACAAAACTCGATTTGTGCAAAAGCTGATAATCCTACTGCTATCTAAACCAAAGCATTATATACCACTACACATTCTTTCCAAATGCCGTGGCTATCTTTCCCTTCCCAGACCCCGCTCTCTCCTTTCAATGATTCATCGTTATCCTTCCATTTTTGAACTTTTTTCAATCCCATATCCACCCACACCACTCAATGCAACAAAGCTTTACCCTCAACTTTGTGTCCGTCTAACCGCAGCAGCAGCATCTATTGCTAAACAGGACTCTGATCTCAAATTGGTAATTTCAAACACATTGGCTGAAAAGCTTCAGAAATTACTTATGCTTTCTTCACACCACAGGATTCTTTTATCAAAGCTGGTTCACCTTGCTCCCGATCTAAGTATGCCTCCAAATTTTAGGTCCCGTCTCTGTAATGATTATCCAGAAAAATTTAGGACTGTTGATACCTCATATGGCCGTGCACTGGAGCTTGTCTCCTGGGACCCCGAGTTGGCAAAGCCTTTACCTTGCATTCAAGTGCCTTCACGTGAGCTAATAGTGGATAGGCCGTTAAAATTCAACTTGTTGAGACTAAGAAAGGGGCTGAATTTGAAAAGAACCCACCAGGAATTTCTAATTAAGTTCAGGGATTTGCCAGATGTTTGCCCTTACAAAACTCCAGCGAGTGAGTTGGCCAAGGAGTCTCTCGAGTCAGAGAAACGAGCTTGTGCTGTGGTGCGAGAAGTATTGGGGATGATGATTGAGAAGAGGACTTTAATAGACCACTTGACACATTTCAGAAAAGATTTTGGGCTACCAAATAAACTGAGAGGAATGATTGTGAGGCATCCGGAGTTATTTTATGTGAGTTTGAAGGGTCAGAGAGACTCTGTATTCCTTGTGGAAGGATTTGACGATAAGGGTGCTCTTTTGGAGAAGGATGAGACTTTAGCAATAAAAAATCGATGGATGGCGCTTTTGAAGGAAGGGAAAAGGATGAGACGGGAGAAGAAGAAGGCTCAAATATATGACAGTAAATATGGAAATGATCATGAAAACAATAATCATGATCATGAGATGGAAAATGACTATGATGACAATTATGACGATGGTTTTGAGAGTTTATTTCAGTATGAGGATTTAGATTTTGAAGATGAGAACAGTGGTGTGCCAAGCATTTGGTCGAATGGAGACTTTTGGACTACAAATAACGTAGATATTAGTAATGATACAGATGAAAGTCACATAGAACCTTGGTGATGGTTAATTTAATTTGTTTGGAAGGATCTTCAAAATATTTCTATAATTGATGAAAACAAAGGGCCTCTTCAGAAATCAGAAAAAGAACTTTGTGAATAATGAATATAAAGATTGACCTGGTAAGCTGAAAAAATCTTTAAGTGAAGCCTGATGATCTATAGGAAGGGCTGAAGCTACTGGTTCTAGTCTCATCTATTTGTGCGTGGGCCATTAATCCTCTGCTGATATACCATTATACCATCTCAAGCTGTATAATTCAAACCTGCTTGACCTGTTCTTTTGTCCCCTCAAAATGTACAATTAGTGCTGGACCTTTCTATGAAGTCTAGACGAAACTTCTCCCTAATCAAGGGGGATGCCTGAGATATAACTTCTAACTCCTACTTATGCATACCATTAGATAAATTAAGACAACAAATTTGGGTTAATGAATAATGTAAATATTTGGGTATAGTTTGGTAGCTCATTCTACCTCGTG

mRNA sequence

CTTCATTCTTCAATAACTCGTTGACACCTCCTCTATTGCTATCGCGTCGGGTCTCAGCTCCTTCCTTACAAACCGCTCTTCAGTTCTTCGCAACTTTCAACAGGTGGTAAACAACCTGAAGATAATTGCTTGCAGTTTAATCTGTTGTGCCAGACAGTAGCATCCCCCATCTGATGCTTTTGAGTCAGAGTTGGAAGAAGGATATGTATCATCTTCTTTAGATTAATTTGATGAATCTGTTTACCTATTGTAATCTAAAAGGCCTTCCATTTATACAAAACTGAAAATGGCTTTATCTTCTCATTTCTTGACCCCTGCGGATTGGCATGCATCCCTTAGTTCAAACCTCCTCAGCGGCAGTCCTTTGTGGTTGCATTCCAAAGTCGACTTGAAGTGTCAAAGAAAAGAAAATTTCATAACTCATTATACTTTGACTCCTTGTTCCTCTATCAAGATTGTTCGCAGTCGTTCATTAGATCGGCATGCTGTAAAACATAACAAAACTCGATTTGTGCAAAAGCTGATAATCCTACTGCTATCTAAACCAAAGCATTATATACCACTACACATTCTTTCCAAATGCCGTGGCTATCTTTCCCTTCCCAGACCCCGCTCTCTCCTTTCAATGATTCATCGTTATCCTTCCATTTTTGAACTTTTTTCAATCCCATATCCACCCACACCACTCAATGCAACAAAGCTTTACCCTCAACTTTGTGTCCGTCTAACCGCAGCAGCAGCATCTATTGCTAAACAGGACTCTGATCTCAAATTGGTAATTTCAAACACATTGGCTGAAAAGCTTCAGAAATTACTTATGCTTTCTTCACACCACAGGATTCTTTTATCAAAGCTGGTTCACCTTGCTCCCGATCTAAGTATGCCTCCAAATTTTAGGTCCCGTCTCTGTAATGATTATCCAGAAAAATTTAGGACTGTTGATACCTCATATGGCCGTGCACTGGAGCTTGTCTCCTGGGACCCCGAGTTGGCAAAGCCTTTACCTTGCATTCAAGTGCCTTCACGTGAGCTAATAGTGGATAGGCCGTTAAAATTCAACTTGTTGAGACTAAGAAAGGGGCTGAATTTGAAAAGAACCCACCAGGAATTTCTAATTAAGTTCAGGGATTTGCCAGATGTTTGCCCTTACAAAACTCCAGCGAGTGAGTTGGCCAAGGAGTCTCTCGAGTCAGAGAAACGAGCTTGTGCTGTGGTGCGAGAAGTATTGGGGATGATGATTGAGAAGAGGACTTTAATAGACCACTTGACACATTTCAGAAAAGATTTTGGGCTACCAAATAAACTGAGAGGAATGATTGTGAGGCATCCGGAGTTATTTTATGTGAGTTTGAAGGGTCAGAGAGACTCTGTATTCCTTGTGGAAGGATTTGACGATAAGGGTGCTCTTTTGGAGAAGGATGAGACTTTAGCAATAAAAAATCGATGGATGGCGCTTTTGAAGGAAGGGAAAAGGATGAGACGGGAGAAGAAGAAGGCTCAAATATATGACAGTAAATATGGAAATGATCATGAAAACAATAATCATGATCATGAGATGGAAAATGACTATGATGACAATTATGACGATGGTTTTGAGAGTTTATTTCAGTATGAGGATTTAGATTTTGAAGATGAGAACAGTGGTGTGCCAAGCATTTGGTCGAATGGAGACTTTTGGACTACAAATAACGTAGATATTAGTAATGATACAGATGAAAGTCACATAGAACCTTGGTGATGGTTAATTTAATTTGTTTGGAAGGATCTTCAAAATATTTCTATAATTGATGAAAACAAAGGGCCTCTTCAGAAATCAGAAAAAGAACTTTGTGAATAATGAATATAAAGATTGACCTGGTAAGCTGAAAAAATCTTTAAGTGAAGCCTGATGATCTATAGGAAGGGCTGAAGCTACTGGTTCTAGTCTCATCTATTTGTGCGTGGGCCATTAATCCTCTGCTGATATACCATTATACCATCTCAAGCTGTATAATTCAAACCTGCTTGACCTGTTCTTTTGTCCCCTCAAAATGTACAATTAGTGCTGGACCTTTCTATGAAGTCTAGACGAAACTTCTCCCTAATCAAGGGGGATGCCTGAGATATAACTTCTAACTCCTACTTATGCATACCATTAGATAAATTAAGACAACAAATTTGGGTTAATGAATAATGTAAATATTTGGGTATAGTTTGGTAGCTCATTCTACCTCGTG

Coding sequence (CDS)

ATGGCTTTATCTTCTCATTTCTTGACCCCTGCGGATTGGCATGCATCCCTTAGTTCAAACCTCCTCAGCGGCAGTCCTTTGTGGTTGCATTCCAAAGTCGACTTGAAGTGTCAAAGAAAAGAAAATTTCATAACTCATTATACTTTGACTCCTTGTTCCTCTATCAAGATTGTTCGCAGTCGTTCATTAGATCGGCATGCTGTAAAACATAACAAAACTCGATTTGTGCAAAAGCTGATAATCCTACTGCTATCTAAACCAAAGCATTATATACCACTACACATTCTTTCCAAATGCCGTGGCTATCTTTCCCTTCCCAGACCCCGCTCTCTCCTTTCAATGATTCATCGTTATCCTTCCATTTTTGAACTTTTTTCAATCCCATATCCACCCACACCACTCAATGCAACAAAGCTTTACCCTCAACTTTGTGTCCGTCTAACCGCAGCAGCAGCATCTATTGCTAAACAGGACTCTGATCTCAAATTGGTAATTTCAAACACATTGGCTGAAAAGCTTCAGAAATTACTTATGCTTTCTTCACACCACAGGATTCTTTTATCAAAGCTGGTTCACCTTGCTCCCGATCTAAGTATGCCTCCAAATTTTAGGTCCCGTCTCTGTAATGATTATCCAGAAAAATTTAGGACTGTTGATACCTCATATGGCCGTGCACTGGAGCTTGTCTCCTGGGACCCCGAGTTGGCAAAGCCTTTACCTTGCATTCAAGTGCCTTCACGTGAGCTAATAGTGGATAGGCCGTTAAAATTCAACTTGTTGAGACTAAGAAAGGGGCTGAATTTGAAAAGAACCCACCAGGAATTTCTAATTAAGTTCAGGGATTTGCCAGATGTTTGCCCTTACAAAACTCCAGCGAGTGAGTTGGCCAAGGAGTCTCTCGAGTCAGAGAAACGAGCTTGTGCTGTGGTGCGAGAAGTATTGGGGATGATGATTGAGAAGAGGACTTTAATAGACCACTTGACACATTTCAGAAAAGATTTTGGGCTACCAAATAAACTGAGAGGAATGATTGTGAGGCATCCGGAGTTATTTTATGTGAGTTTGAAGGGTCAGAGAGACTCTGTATTCCTTGTGGAAGGATTTGACGATAAGGGTGCTCTTTTGGAGAAGGATGAGACTTTAGCAATAAAAAATCGATGGATGGCGCTTTTGAAGGAAGGGAAAAGGATGAGACGGGAGAAGAAGAAGGCTCAAATATATGACAGTAAATATGGAAATGATCATGAAAACAATAATCATGATCATGAGATGGAAAATGACTATGATGACAATTATGACGATGGTTTTGAGAGTTTATTTCAGTATGAGGATTTAGATTTTGAAGATGAGAACAGTGGTGTGCCAAGCATTTGGTCGAATGGAGACTTTTGGACTACAAATAACGTAGATATTAGTAATGATACAGATGAAAGTCACATAGAACCTTGGTGA

Protein sequence

MALSSHFLTPADWHASLSSNLLSGSPLWLHSKVDLKCQRKENFITHYTLTPCSSIKIVRSRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSMIHRYPSIFELFSIPYPPTPLNATKLYPQLCVRLTAAAASIAKQDSDLKLVISNTLAEKLQKLLMLSSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVSWDPELAKPLPCIQVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPDVCPYKTPASELAKESLESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQRDSVFLVEGFDDKGALLEKDETLAIKNRWMALLKEGKRMRREKKKAQIYDSKYGNDHENNNHDHEMENDYDDNYDDGFESLFQYEDLDFEDENSGVPSIWSNGDFWTTNNVDISNDTDESHIEPW

Homology

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BLAST of IVF0015743 vs. ExPASy Swiss-Prot
Match: B6TTV8 (Protein WHAT'S THIS FACTOR 1, chloroplastic OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 5.9e-59
Identity = 158/438 (36.07%), Postives = 226/438 (51.60%), Query Frame = 0


Query: 53  SSIKIVRSRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLL 112
           +++K  +    D    +  K + V KL  +L+++P   + L  L + R  L L R R L+
Sbjct: 53  AAVKRRKEAPFDTVIQRDKKLKLVLKLRNILVAQPDRVMSLRELGRFRRDLGLTRKRRLI 112

Query: 113 SMIHRYPSIFELFSIPYPPTPLNATKLYPQLCVRLTAAAASIAKQDSDLKLVISNTLAEK 172
           +++ R+P +F++              +Y  L  RLT AA  +   +  L+         K
Sbjct: 113 ALLRRFPGVFDVVE----------EGVY-SLRFRLTPAAERLYLDELRLRNESEGLAVAK 172

Query: 173 LQKLLMLSSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVSWD 232
           L+KLLM+S   RIL+ K+ HL  DL +PP FR  +C  YP+ FR V    G ALEL  WD
Sbjct: 173 LRKLLMMSQEKRILIEKVAHLKHDLGLPPEFRDTVCLRYPQYFRVVRMDRGPALELTHWD 232

Query: 233 PELA--------KPLPCIQVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPD 292
           PELA        +     +   R LI+DRPLKFN +RL KGL L R     + +F+++P 
Sbjct: 233 PELAVSAAELAEEESRAREAEERNLIIDRPLKFNRVRLPKGLKLTRGEARRIARFKEMPY 292

Query: 293 VCPYKTPASELAKESLESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMI 352
           + PY    S L   S E EK AC VV E+L + +EKRTL+DHLTHFR++F     LRGMI
Sbjct: 293 ISPY-ADFSHLRSGSDEKEKHACGVVHEILSLTVEKRTLVDHLTHFREEFRFSQSLRGMI 352

Query: 353 VRHPELFYVSLKGQRDSVFLVEGFDDKGALLEKDETLAIKNRWMALLKEGKRMRREKKKA 412
           +RHP++FYVS KG RDSVFL E + D   L+EK++ + +K +  AL+   +  RR     
Sbjct: 353 IRHPDMFYVSFKGDRDSVFLREAYKD-SQLVEKNQLVLLKEKMRALVAVPRFPRRAAVGT 412

Query: 413 QIYDSKYGNDHENNNHDHEMENDY-DDNYDDGFESLFQYEDLDFEDENSGVPSIWSNGDF 472
                  G + E  N   +  +   D+ YDD  E L   EDL  E       + +  GD 
Sbjct: 413 -------GEEAEGMNGSLQSRDQVSDEEYDDEDEGLSDMEDLISELSGGKSDADYEWGDG 470

Query: 473 WTTNNVDISNDTDESHIE 482
           W   N D   D  +  ++
Sbjct: 473 WFGENDDSPPDFGDDEVK 470

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BLAST of IVF0015743 vs. ExPASy Swiss-Prot
Match: Q65XL5 (Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0571100 PE=2 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 1.1e-57
Identity = 155/433 (35.80%), Postives = 223/433 (51.50%), Query Frame = 0


Query: 53  SSIKIVRSRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLL 112
           +++K  +    D    +  K + V KL  +L+S P   + L  L + R  L L R R L+
Sbjct: 59  AAVKRRKEIPFDNVIQRDKKLKLVLKLRNILVSNPDRVMSLRDLGRFRRDLGLTRKRRLI 118

Query: 113 SMIHRYPSIFELFSIPYPPTPLNATKLYPQLCVRLTAAAASIAKQDSDLKLVISNTLAEK 172
           +++ R+P +FE+              +Y  L  RLT AA  +   +  LK         K
Sbjct: 119 ALLKRFPGVFEVVE----------EGVY-SLRFRLTPAAERLYLDELHLKNESEGLAVTK 178

Query: 173 LQKLLMLSSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVSWD 232
           L+KLLM+S   RIL+ K+ HL  DL +PP FR  +C  YP+ FR V    G  LEL  WD
Sbjct: 179 LRKLLMMSQDKRILIEKIAHLKNDLGLPPEFRDTICLRYPQYFRVVQMDRGPGLELTHWD 238

Query: 233 PELAKPLPCI--------QVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPD 292
           PELA     +        +   R LI+DRPLKFN ++L +GL L R     + +F+++P 
Sbjct: 239 PELAVSAAEVAEEENRAREEQERNLIIDRPLKFNRVKLPQGLKLSRGEARRVAQFKEMPY 298

Query: 293 VCPYKTPASELAKESLESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMI 352
           + PY +  S L   S E EK AC VV E+L + +EKRTL+DHLTHFR++F     LRGM+
Sbjct: 299 ISPY-SDFSHLRSGSAEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQSLRGML 358

Query: 353 VRHPELFYVSLKGQRDSVFLVEGFDDKGALLEKDETLAIKNRWMALLKEGKRMRREKKKA 412
           +RHP++FYVSLKG RDSVFL E + +   L+EK + + +K +  AL+   +  RR     
Sbjct: 359 IRHPDMFYVSLKGDRDSVFLREAYKN-SQLVEKSKLVLLKEKMRALVAVPRFPRRGVPAT 418

Query: 413 QIYDSKYGNDHENNNHDHEMENDYDDNYDDGFESLFQYEDLDFEDENSGVPSIWSNGDFW 472
                    + +  N   +M ++  D  DD  E L   EDL  E       + +  GD W
Sbjct: 419 -------SEEADRTNGAAQMLSEGSDVEDDEDEGLSDMEDLISEISGGKSDTDYHWGDGW 471

Query: 473 TTNNVDISNDTDE 478
              N D   D ++
Sbjct: 479 VGENDDSPPDFED 471

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BLAST of IVF0015743 vs. ExPASy Swiss-Prot
Match: A0MFS5 (Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g01037 PE=3 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 4.7e-56
Identity = 144/406 (35.47%), Postives = 218/406 (53.69%), Query Frame = 0


Query: 53  SSIKIVRSRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLL 112
           +++K  +  + D    +  K + V  +  +L+S+P   + L  L K R  L L + R  +
Sbjct: 74  AAVKRRKELTFDSVVQRDKKLKLVLNIRKILVSQPDRMMSLRGLGKYRRDLGLKKRRRFI 133

Query: 113 SMIHRYPSIFELFSIPYPPTPLNATKLYPQLCVRLTAAAASIAKQDSDLKLVISNTLAEK 172
           +++ +YP +FE+             +    L  ++T+ A  +   +  ++  + + L  K
Sbjct: 134 ALLRKYPGVFEI-----------VEEGAYSLRFKMTSEAERLYLDEMRIRNELEDVLVVK 193

Query: 173 LQKLLMLSSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVSWD 232
           L+KL+M+S   RILL K+ HL  DL +P  FR  +C  YP+ FR V T  G ALEL  WD
Sbjct: 194 LRKLVMMSIDKRILLEKISHLKTDLGLPLEFRDTICQRYPQYFRVVPTPRGPALELTHWD 253

Query: 233 PELAKPLPCI--------QVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPD 292
           PELA     +        +   R LI+DRP KFN ++L +GLNL ++    + +FRD+  
Sbjct: 254 PELAVSAAELSEDDNRTRESEERNLIIDRPPKFNRVKLPRGLNLSKSETRKISQFRDMQY 313

Query: 293 VCPYKTPASELAKESLESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMI 352
           + PYK   S L   +LE EK AC V+ E+L +  EKRTL+DHLTHFR++F    +LRGM+
Sbjct: 314 ISPYK-DFSHLRSGTLEKEKHACGVIHELLSLTTEKRTLVDHLTHFREEFRFSQQLRGML 373

Query: 353 VRHPELFYVSLKGQRDSVFLVEGFDDKGALLEKDETLAIKNRWMALL-------KEGKRM 412
           +RHP+LFYVSLKG+RDSVFL E + +   L++KD    +K +  AL+       + G R 
Sbjct: 374 IRHPDLFYVSLKGERDSVFLREAYRN-SELIDKDPLTLVKEKMRALVSVPRFPRRGGPRK 433

Query: 413 RREKKKAQIYDSKYGNDHENNNHDHEMENDYD--------DNYDDG 436
             E ++ +I  S    + E    D E  +D D         N DDG
Sbjct: 434 DEEGREVEIDGSDADGEEEEEESDAEEWSDVDGYLEGEDGGNDDDG 466

[Close]

BLAST of IVF0015743 vs. ExPASy Swiss-Prot
Match: Q689D6 (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 6.6e-18
Identity = 95/378 (25.13%), Postives = 176/378 (46.56%), Query Frame = 0


Query: 58  VRSRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLP-RPRSLLSMIH 117
           VR    D +     K R V K   L+LS+P H I + +L      L L  +     + + 
Sbjct: 47  VRDHGYDNYMEVEKKIRKVVKFHSLILSQPNHTIAISLLDTLARRLGLGFKQHEPGAFLL 106

Query: 118 RYPSIFELFSIPYPPTPLNATKLYPQLCVRLTAAAASIAKQDSDLKLVISNTLAEKLQKL 177
           ++P +FE++  P          +   L  RLT  A    + + +  L        +L+KL
Sbjct: 107 KFPHVFEIYEHP----------VQRILYCRLTRKALDQIRHEHEAVLDQIPDAVTRLRKL 166

Query: 178 LMLSSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVD--TSYGRALELVSWDPE 237
           +M+S+  RI L  +     +  +P +F   +   +P+ FR +D   +  + +E+V  DP 
Sbjct: 167 VMMSNTGRIRLEHVRIARTEFGLPEDFEYSVILKHPQFFRLIDGEETRDKYIEIVEKDPN 226

Query: 238 LAKPLPCIQVPSREL------IVDRPLKFN-LLRLRKGLNLKRTHQEFLIKFRDLPDVCP 297
           L+    C     RE+      I    ++F+ ++    G  + +  +  + K++ LP   P
Sbjct: 227 LS---ICAIERVREIEYRTKGIDAEDVRFSFVVNFPPGFKIGKYFRIAVWKWQRLPYWSP 286

Query: 298 YKTPASELAKESLES----EKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGM 357
           Y+   S     S+E+    EKR+ A + E+L + +EK+  ++ + HFR    LP KL+  
Sbjct: 287 YE-DISGYDLRSMEAQNRLEKRSVACIHELLSLTVEKKITLERIAHFRNVMNLPKKLKEF 346

Query: 358 IVRHPELFYVSLK---GQRDSVFLVEGFDDKGALLEKDETLAIKNRWMALLKEGKRMRRE 417
           +++H  +FY+S +   G+  +VFL EG+  +G L+E ++    + R   L+      R+ 
Sbjct: 347 LLQHQGIFYISTRGNYGKLHTVFLREGY-KRGELVEPNDVYLARRRLAELVLMSP--RKA 406

Query: 418 KKKAQIYDSKYGNDHENN 419
           K  A++   + G D E++
Sbjct: 407 KVDAELVRYRDGLDDEDD 407

[Close]

BLAST of IVF0015743 vs. ExPASy Swiss-Prot
Match: Q9ZUZ6 (Protein WHAT'S THIS FACTOR 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=WTF9 PE=4 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 1.2e-16
Identity = 83/347 (23.92%), Postives = 160/347 (46.11%), Query Frame = 0


Query: 66  HAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSMIHRYPSIFELF 125
           H ++ ++ + V  L   ++ +P   IP+  +SK      +     +   + ++PSIFE F
Sbjct: 42  HILRSSQLKSVVSLKNCIVQEPNRCIPISAISKKTRQFDV--STKIAHFLRKFPSIFEEF 101

Query: 126 SIPYPPTPLNATKLYPQLCVRLTAAAASIAKQDSDLKLVISNTLAEKLQKLLMLSSHHRI 185
             P    P            RLT  A  + +Q+  +    ++ L ++L+KL+++S  + +
Sbjct: 102 VGPEYNLP----------WFRLTPEATELDRQERVVYQTSADDLRDRLKKLILMSKDNVL 161

Query: 186 LLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTS---YGRALELVSWDPELAKPLPCI 245
            LS +  +   L +P ++      +    FR VD      G A++    D  L+      
Sbjct: 162 PLSIVQGMKWYLGLPDDYLQFPDMNLDSSFRFVDMEDGVKGLAVDYNGGDKVLSVLQKNA 221

Query: 246 QVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPDVCPYK-----TPASELAK 305
               R  +    ++F L    KG  L+   +++L++F+ LP V PY       P+S++A 
Sbjct: 222 MKKRRGEVSLEEIEFPLFP-SKGCRLRVKIEDWLMEFQKLPYVSPYDDYSCLDPSSDIA- 281

Query: 306 ESLESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKG 365
                EKR    + E+L + +E       L   +K FGLP K+     RHP++FY+S+K 
Sbjct: 282 -----EKRVVGFLHELLCLFVEHSAERKKLLCLKKHFGLPQKVHKAFERHPQIFYLSMKN 341

Query: 366 QRDSVFLVEGFDDKGALLEKDETLAIKNRWMALLKEGKRMRREKKKA 405
           +  +  L E + DK A +E    L ++ +++ L+K  + + + ++ +
Sbjct: 342 KTCTAILREPYRDK-ASVETHPVLGVRKKYIQLMKNSELILKSRRNS 368

[Close]

BLAST of IVF0015743 vs. ExPASy TrEMBL
Match: A0A1S3BYB2 (protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo OX=3656 GN=LOC103494529 PE=4 SV=1)

HSP 1 Score: 964.9 bits (2493), Expect = 1.2e-277
Identity = 483/483 (100.00%), Postives = 483/483 (100.00%), Query Frame = 0


Query: 1   MALSSHFLTPADWHASLSSNLLSGSPLWLHSKVDLKCQRKENFITHYTLTPCSSIKIVRS 60
           MALSSHFLTPADWHASLSSNLLSGSPLWLHSKVDLKCQRKENFITHYTLTPCSSIKIVRS
Sbjct: 1   MALSSHFLTPADWHASLSSNLLSGSPLWLHSKVDLKCQRKENFITHYTLTPCSSIKIVRS 60

Query: 61  RSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSMIHRYPS 120
           RSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSMIHRYPS
Sbjct: 61  RSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSMIHRYPS 120

Query: 121 IFELFSIPYPPTPLNATKLYPQLCVRLTAAAASIAKQDSDLKLVISNTLAEKLQKLLMLS 180
           IFELFSIPYPPTPLNATKLYPQLCVRLTAAAASIAKQDSDLKLVISNTLAEKLQKLLMLS
Sbjct: 121 IFELFSIPYPPTPLNATKLYPQLCVRLTAAAASIAKQDSDLKLVISNTLAEKLQKLLMLS 180

Query: 181 SHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVSWDPELAKPLP 240
           SHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVSWDPELAKPLP
Sbjct: 181 SHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVSWDPELAKPLP 240

Query: 241 CIQVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPDVCPYKTPASELAKESL 300
           CIQVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPDVCPYKTPASELAKESL
Sbjct: 241 CIQVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPDVCPYKTPASELAKESL 300

Query: 301 ESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQRD 360
           ESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQRD
Sbjct: 301 ESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQRD 360

Query: 361 SVFLVEGFDDKGALLEKDETLAIKNRWMALLKEGKRMRREKKKAQIYDSKYGNDHENNNH 420
           SVFLVEGFDDKGALLEKDETLAIKNRWMALLKEGKRMRREKKKAQIYDSKYGNDHENNNH
Sbjct: 361 SVFLVEGFDDKGALLEKDETLAIKNRWMALLKEGKRMRREKKKAQIYDSKYGNDHENNNH 420

Query: 421 DHEMENDYDDNYDDGFESLFQYEDLDFEDENSGVPSIWSNGDFWTTNNVDISNDTDESHI 480
           DHEMENDYDDNYDDGFESLFQYEDLDFEDENSGVPSIWSNGDFWTTNNVDISNDTDESHI
Sbjct: 421 DHEMENDYDDNYDDGFESLFQYEDLDFEDENSGVPSIWSNGDFWTTNNVDISNDTDESHI 480

Query: 481 EPW 484
           EPW
Sbjct: 481 EPW 483

[Close]

BLAST of IVF0015743 vs. ExPASy TrEMBL
Match: A0A5D3D0F7 (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G001190 PE=4 SV=1)

HSP 1 Score: 964.9 bits (2493), Expect = 1.2e-277
Identity = 483/483 (100.00%), Postives = 483/483 (100.00%), Query Frame = 0


Query: 1   MALSSHFLTPADWHASLSSNLLSGSPLWLHSKVDLKCQRKENFITHYTLTPCSSIKIVRS 60
           MALSSHFLTPADWHASLSSNLLSGSPLWLHSKVDLKCQRKENFITHYTLTPCSSIKIVRS
Sbjct: 1   MALSSHFLTPADWHASLSSNLLSGSPLWLHSKVDLKCQRKENFITHYTLTPCSSIKIVRS 60

Query: 61  RSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSMIHRYPS 120
           RSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSMIHRYPS
Sbjct: 61  RSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSMIHRYPS 120

Query: 121 IFELFSIPYPPTPLNATKLYPQLCVRLTAAAASIAKQDSDLKLVISNTLAEKLQKLLMLS 180
           IFELFSIPYPPTPLNATKLYPQLCVRLTAAAASIAKQDSDLKLVISNTLAEKLQKLLMLS
Sbjct: 121 IFELFSIPYPPTPLNATKLYPQLCVRLTAAAASIAKQDSDLKLVISNTLAEKLQKLLMLS 180

Query: 181 SHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVSWDPELAKPLP 240
           SHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVSWDPELAKPLP
Sbjct: 181 SHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVSWDPELAKPLP 240

Query: 241 CIQVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPDVCPYKTPASELAKESL 300
           CIQVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPDVCPYKTPASELAKESL
Sbjct: 241 CIQVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPDVCPYKTPASELAKESL 300

Query: 301 ESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQRD 360
           ESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQRD
Sbjct: 301 ESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQRD 360

Query: 361 SVFLVEGFDDKGALLEKDETLAIKNRWMALLKEGKRMRREKKKAQIYDSKYGNDHENNNH 420
           SVFLVEGFDDKGALLEKDETLAIKNRWMALLKEGKRMRREKKKAQIYDSKYGNDHENNNH
Sbjct: 361 SVFLVEGFDDKGALLEKDETLAIKNRWMALLKEGKRMRREKKKAQIYDSKYGNDHENNNH 420

Query: 421 DHEMENDYDDNYDDGFESLFQYEDLDFEDENSGVPSIWSNGDFWTTNNVDISNDTDESHI 480
           DHEMENDYDDNYDDGFESLFQYEDLDFEDENSGVPSIWSNGDFWTTNNVDISNDTDESHI
Sbjct: 421 DHEMENDYDDNYDDGFESLFQYEDLDFEDENSGVPSIWSNGDFWTTNNVDISNDTDESHI 480

Query: 481 EPW 484
           EPW
Sbjct: 481 EPW 483

[Close]

BLAST of IVF0015743 vs. ExPASy TrEMBL
Match: A0A5A7TP08 (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G003590 PE=4 SV=1)

HSP 1 Score: 955.7 bits (2469), Expect = 7.5e-275
Identity = 478/483 (98.96%), Postives = 479/483 (99.17%), Query Frame = 0


Query: 1   MALSSHFLTPADWHASLSSNLLSGSPLWLHSKVDLKCQRKENFITHYTLTPCSSIKIVRS 60
           MALSS FLTP DWHASLSSNLLSGSPLWLHSKVD KCQRKENFITHYTLTPCSSIKIVRS
Sbjct: 1   MALSSRFLTPTDWHASLSSNLLSGSPLWLHSKVDFKCQRKENFITHYTLTPCSSIKIVRS 60

Query: 61  RSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSMIHRYPS 120
           RSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSMIHRYPS
Sbjct: 61  RSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSMIHRYPS 120

Query: 121 IFELFSIPYPPTPLNATKLYPQLCVRLTAAAASIAKQDSDLKLVISNTLAEKLQKLLMLS 180
           IFELFSIPYPPTPLNATKLYPQLCVRLTAAAASIAKQDSDLKLVISNTLAEKLQKLLMLS
Sbjct: 121 IFELFSIPYPPTPLNATKLYPQLCVRLTAAAASIAKQDSDLKLVISNTLAEKLQKLLMLS 180

Query: 181 SHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVSWDPELAKPLP 240
           SHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVSWDPELAKPLP
Sbjct: 181 SHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVSWDPELAKPLP 240

Query: 241 CIQVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPDVCPYKTPASELAKESL 300
           CIQVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPD+CPYKTPASELAKESL
Sbjct: 241 CIQVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPDICPYKTPASELAKESL 300

Query: 301 ESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQRD 360
           ESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQRD
Sbjct: 301 ESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQRD 360

Query: 361 SVFLVEGFDDKGALLEKDETLAIKNRWMALLKEGKRMRREKKKAQIYDSKYGNDHENNNH 420
           SVFLVEGFDDKGALLEKDETLAIKNRWMALLKEGKRMRREKKKAQIYDSKYGNDHENNNH
Sbjct: 361 SVFLVEGFDDKGALLEKDETLAIKNRWMALLKEGKRMRREKKKAQIYDSKYGNDHENNNH 420

Query: 421 DHEMENDYDDNYDDGFESLFQYEDLDFEDENSGVPSIWSNGDFWTTNNVDISNDTDESHI 480
           DHEMENDYDDNYDDGFESLFQYEDLDFEDENSGVPSIWSNGDFWTTNNVDISNDTD SHI
Sbjct: 421 DHEMENDYDDNYDDGFESLFQYEDLDFEDENSGVPSIWSNGDFWTTNNVDISNDTDGSHI 480

Query: 481 EPW 484
           EPW
Sbjct: 481 EPW 483

[Close]

BLAST of IVF0015743 vs. ExPASy TrEMBL
Match: A0A0A0KU86 (PORR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G015830 PE=4 SV=1)

HSP 1 Score: 926.4 bits (2393), Expect = 4.9e-266
Identity = 463/484 (95.66%), Postives = 469/484 (96.90%), Query Frame = 0


Query: 1   MALSSHFLTPADWH-ASLSSNLLSGSPLWLHSKVDLKCQRKENFITHYTLTPCSSIKIVR 60
           MAL SHFLTP DWH  SLSSNLLSGSPLWLHSKVD KCQRKENF THYTLTPCSSIKIVR
Sbjct: 1   MALCSHFLTPTDWHVTSLSSNLLSGSPLWLHSKVDFKCQRKENFRTHYTLTPCSSIKIVR 60

Query: 61  SRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSMIHRYP 120
           SRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSMIHRYP
Sbjct: 61  SRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSMIHRYP 120

Query: 121 SIFELFSIPYPPTPLNATKLYPQLCVRLTAAAASIAKQDSDLKLVISNTLAEKLQKLLML 180
           SIFELFSIPYPPTPLNATKLYPQLCVRLT AAASIAKQDSDLK+VISN LAEKLQKLLML
Sbjct: 121 SIFELFSIPYPPTPLNATKLYPQLCVRLTPAAASIAKQDSDLKMVISNKLAEKLQKLLML 180

Query: 181 SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVSWDPELAKPL 240
           SSHHRILLSKLVHLAPDLS+PPNFRSRLCNDYPEKFRTVDTSYGRALELVSWDPELAKPL
Sbjct: 181 SSHHRILLSKLVHLAPDLSLPPNFRSRLCNDYPEKFRTVDTSYGRALELVSWDPELAKPL 240

Query: 241 PCIQVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPDVCPYKTPASELAKES 300
           PCIQVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPDVCPYK PASELAKES
Sbjct: 241 PCIQVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPDVCPYKNPASELAKES 300

Query: 301 LESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR 360
           LESEKRACAVVREVLGMM+EKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR
Sbjct: 301 LESEKRACAVVREVLGMMVEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR 360

Query: 361 DSVFLVEGFDDKGALLEKDETLAIKNRWMALLKEGKRMRREKKKAQIYDSKYGNDHENNN 420
           DSVFLVEGFDDKG LLEKDETLAIKN+WM LLKE KR+RREKKKAQIYDSKYGNDHENNN
Sbjct: 361 DSVFLVEGFDDKGVLLEKDETLAIKNQWMTLLKEAKRLRREKKKAQIYDSKYGNDHENNN 420

Query: 421 HDHEMENDYDDNYDDGFESLFQYEDLDFEDENSGVPSIWSNGDFWTTNNVDISNDTDESH 480
           HDHEMENDYDD+YDDGFESLFQYEDLDFEDENSGVPSIWSNGDFWTTNNVDISND D  H
Sbjct: 421 HDHEMENDYDDDYDDGFESLFQYEDLDFEDENSGVPSIWSNGDFWTTNNVDISNDADGGH 480

Query: 481 IEPW 484
           IEPW
Sbjct: 481 IEPW 484

[Close]

BLAST of IVF0015743 vs. ExPASy TrEMBL
Match: A0A6J1GVP1 (protein WHAT'S THIS FACTOR 1 OS=Cucurbita moschata OX=3662 GN=LOC111457587 PE=4 SV=1)

HSP 1 Score: 849.4 bits (2193), Expect = 7.6e-243
Identity = 431/485 (88.87%), Postives = 452/485 (93.20%), Query Frame = 0


Query: 1   MALSSHFLTPADWH-ASLSSNLLSGSPLWLHSKVDLKCQRKENFITHYTLTPCSSIKIVR 60
           MALSS FLTP DWH  SLSSNLL G+PLWLHS V  K QRKENF T YTLTP +S+KIVR
Sbjct: 1   MALSSQFLTPRDWHVTSLSSNLLCGTPLWLHSNVGCKYQRKENFKTCYTLTPRASVKIVR 60

Query: 61  SRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSMIHRYP 120
           SR LDRHAVKHNKTRFVQKLIILLLSKPKHYIP+HILSKCRGYLSLP+PRSLLSMIHRYP
Sbjct: 61  SRPLDRHAVKHNKTRFVQKLIILLLSKPKHYIPIHILSKCRGYLSLPKPRSLLSMIHRYP 120

Query: 121 SIFELFSIPYPPTPLNATKLYPQLCVRLTAAAASIAKQDSDLKLVISNTLAEKLQKLLML 180
           SIFELFSIPYPPTPLNATKLYPQLCVRLT  AAS+AKQDS+LKLVISNTLAEKLQKLLML
Sbjct: 121 SIFELFSIPYPPTPLNATKLYPQLCVRLTPVAASLAKQDSNLKLVISNTLAEKLQKLLML 180

Query: 181 SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVSWDPELAKPL 240
           SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELV WDPELAKPL
Sbjct: 181 SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVFWDPELAKPL 240

Query: 241 PCIQVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPDVCPYKTPASELAKES 300
           PC+QV SRELIVDRPLKFNLL+LRKGLNLKR HQEFLIKFRDLPDVCPYKTPASELAKES
Sbjct: 241 PCLQVSSRELIVDRPLKFNLLKLRKGLNLKRAHQEFLIKFRDLPDVCPYKTPASELAKES 300

Query: 301 LESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR 360
           LESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR
Sbjct: 301 LESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR 360

Query: 361 DSVFLVEGFDDKGALLEKDETLAIKNRWMALLKEGKRMRREKKKAQIYDSKYGNDHENNN 420
           DSVFLVEGF+DKG L+EKDETLAIKN+WM LL EGKRMRREK+KAQIYDS+YGNDHEN++
Sbjct: 361 DSVFLVEGFNDKGHLIEKDETLAIKNQWMKLLMEGKRMRREKRKAQIYDSRYGNDHENHS 420

Query: 421 HDHEMENDYDDNYDDGFESLFQYEDLDFEDENSGVPSIWSNGDFWTTNN-VDISNDTDES 480
           HDHEME DYDD+Y+DGFESLFQYEDLDFEDE S +PS  SNGDFWTTNN  DI N  +  
Sbjct: 421 HDHEMETDYDDDYEDGFESLFQYEDLDFEDEESDLPSNRSNGDFWTTNNAADIINGENGG 480

Query: 481 HIEPW 484
           HI+PW
Sbjct: 481 HIKPW 485

[Close]

BLAST of IVF0015743 vs. NCBI nr
Match: XP_008453967.1 (PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo] >XP_016901446.1 PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo] >XP_016901447.1 PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo] >TYK16978.1 protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo var. makuwa])

HSP 1 Score: 967 bits (2501), Expect = 0.0
Identity = 483/483 (100.00%), Postives = 483/483 (100.00%), Query Frame = 0


Query: 1   MALSSHFLTPADWHASLSSNLLSGSPLWLHSKVDLKCQRKENFITHYTLTPCSSIKIVRS 60
           MALSSHFLTPADWHASLSSNLLSGSPLWLHSKVDLKCQRKENFITHYTLTPCSSIKIVRS
Sbjct: 1   MALSSHFLTPADWHASLSSNLLSGSPLWLHSKVDLKCQRKENFITHYTLTPCSSIKIVRS 60

Query: 61  RSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSMIHRYPS 120
           RSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSMIHRYPS
Sbjct: 61  RSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSMIHRYPS 120

Query: 121 IFELFSIPYPPTPLNATKLYPQLCVRLTAAAASIAKQDSDLKLVISNTLAEKLQKLLMLS 180
           IFELFSIPYPPTPLNATKLYPQLCVRLTAAAASIAKQDSDLKLVISNTLAEKLQKLLMLS
Sbjct: 121 IFELFSIPYPPTPLNATKLYPQLCVRLTAAAASIAKQDSDLKLVISNTLAEKLQKLLMLS 180

Query: 181 SHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVSWDPELAKPLP 240
           SHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVSWDPELAKPLP
Sbjct: 181 SHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVSWDPELAKPLP 240

Query: 241 CIQVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPDVCPYKTPASELAKESL 300
           CIQVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPDVCPYKTPASELAKESL
Sbjct: 241 CIQVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPDVCPYKTPASELAKESL 300

Query: 301 ESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQRD 360
           ESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQRD
Sbjct: 301 ESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQRD 360

Query: 361 SVFLVEGFDDKGALLEKDETLAIKNRWMALLKEGKRMRREKKKAQIYDSKYGNDHENNNH 420
           SVFLVEGFDDKGALLEKDETLAIKNRWMALLKEGKRMRREKKKAQIYDSKYGNDHENNNH
Sbjct: 361 SVFLVEGFDDKGALLEKDETLAIKNRWMALLKEGKRMRREKKKAQIYDSKYGNDHENNNH 420

Query: 421 DHEMENDYDDNYDDGFESLFQYEDLDFEDENSGVPSIWSNGDFWTTNNVDISNDTDESHI 480
           DHEMENDYDDNYDDGFESLFQYEDLDFEDENSGVPSIWSNGDFWTTNNVDISNDTDESHI
Sbjct: 421 DHEMENDYDDNYDDGFESLFQYEDLDFEDENSGVPSIWSNGDFWTTNNVDISNDTDESHI 480

Query: 481 EPW 483
           EPW
Sbjct: 481 EPW 483

[Close]

BLAST of IVF0015743 vs. NCBI nr
Match: KAA0044608.1 (protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo var. makuwa])

HSP 1 Score: 958 bits (2477), Expect = 0.0
Identity = 478/483 (98.96%), Postives = 479/483 (99.17%), Query Frame = 0


Query: 1   MALSSHFLTPADWHASLSSNLLSGSPLWLHSKVDLKCQRKENFITHYTLTPCSSIKIVRS 60
           MALSS FLTP DWHASLSSNLLSGSPLWLHSKVD KCQRKENFITHYTLTPCSSIKIVRS
Sbjct: 1   MALSSRFLTPTDWHASLSSNLLSGSPLWLHSKVDFKCQRKENFITHYTLTPCSSIKIVRS 60

Query: 61  RSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSMIHRYPS 120
           RSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSMIHRYPS
Sbjct: 61  RSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSMIHRYPS 120

Query: 121 IFELFSIPYPPTPLNATKLYPQLCVRLTAAAASIAKQDSDLKLVISNTLAEKLQKLLMLS 180
           IFELFSIPYPPTPLNATKLYPQLCVRLTAAAASIAKQDSDLKLVISNTLAEKLQKLLMLS
Sbjct: 121 IFELFSIPYPPTPLNATKLYPQLCVRLTAAAASIAKQDSDLKLVISNTLAEKLQKLLMLS 180

Query: 181 SHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVSWDPELAKPLP 240
           SHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVSWDPELAKPLP
Sbjct: 181 SHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVSWDPELAKPLP 240

Query: 241 CIQVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPDVCPYKTPASELAKESL 300
           CIQVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPD+CPYKTPASELAKESL
Sbjct: 241 CIQVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPDICPYKTPASELAKESL 300

Query: 301 ESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQRD 360
           ESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQRD
Sbjct: 301 ESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQRD 360

Query: 361 SVFLVEGFDDKGALLEKDETLAIKNRWMALLKEGKRMRREKKKAQIYDSKYGNDHENNNH 420
           SVFLVEGFDDKGALLEKDETLAIKNRWMALLKEGKRMRREKKKAQIYDSKYGNDHENNNH
Sbjct: 361 SVFLVEGFDDKGALLEKDETLAIKNRWMALLKEGKRMRREKKKAQIYDSKYGNDHENNNH 420

Query: 421 DHEMENDYDDNYDDGFESLFQYEDLDFEDENSGVPSIWSNGDFWTTNNVDISNDTDESHI 480
           DHEMENDYDDNYDDGFESLFQYEDLDFEDENSGVPSIWSNGDFWTTNNVDISNDTD SHI
Sbjct: 421 DHEMENDYDDNYDDGFESLFQYEDLDFEDENSGVPSIWSNGDFWTTNNVDISNDTDGSHI 480

Query: 481 EPW 483
           EPW
Sbjct: 481 EPW 483

[Close]

BLAST of IVF0015743 vs. NCBI nr
Match: XP_004152293.1 (protein WHAT'S THIS FACTOR 1, chloroplastic [Cucumis sativus] >XP_031739932.1 protein WHAT'S THIS FACTOR 1, chloroplastic [Cucumis sativus] >KGN53093.1 hypothetical protein Csa_015066 [Cucumis sativus])

HSP 1 Score: 929 bits (2401), Expect = 0.0
Identity = 463/484 (95.66%), Postives = 469/484 (96.90%), Query Frame = 0


Query: 1   MALSSHFLTPADWHA-SLSSNLLSGSPLWLHSKVDLKCQRKENFITHYTLTPCSSIKIVR 60
           MAL SHFLTP DWH  SLSSNLLSGSPLWLHSKVD KCQRKENF THYTLTPCSSIKIVR
Sbjct: 1   MALCSHFLTPTDWHVTSLSSNLLSGSPLWLHSKVDFKCQRKENFRTHYTLTPCSSIKIVR 60

Query: 61  SRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSMIHRYP 120
           SRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSMIHRYP
Sbjct: 61  SRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSMIHRYP 120

Query: 121 SIFELFSIPYPPTPLNATKLYPQLCVRLTAAAASIAKQDSDLKLVISNTLAEKLQKLLML 180
           SIFELFSIPYPPTPLNATKLYPQLCVRLT AAASIAKQDSDLK+VISN LAEKLQKLLML
Sbjct: 121 SIFELFSIPYPPTPLNATKLYPQLCVRLTPAAASIAKQDSDLKMVISNKLAEKLQKLLML 180

Query: 181 SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVSWDPELAKPL 240
           SSHHRILLSKLVHLAPDLS+PPNFRSRLCNDYPEKFRTVDTSYGRALELVSWDPELAKPL
Sbjct: 181 SSHHRILLSKLVHLAPDLSLPPNFRSRLCNDYPEKFRTVDTSYGRALELVSWDPELAKPL 240

Query: 241 PCIQVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPDVCPYKTPASELAKES 300
           PCIQVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPDVCPYK PASELAKES
Sbjct: 241 PCIQVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPDVCPYKNPASELAKES 300

Query: 301 LESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR 360
           LESEKRACAVVREVLGMM+EKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR
Sbjct: 301 LESEKRACAVVREVLGMMVEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR 360

Query: 361 DSVFLVEGFDDKGALLEKDETLAIKNRWMALLKEGKRMRREKKKAQIYDSKYGNDHENNN 420
           DSVFLVEGFDDKG LLEKDETLAIKN+WM LLKE KR+RREKKKAQIYDSKYGNDHENNN
Sbjct: 361 DSVFLVEGFDDKGVLLEKDETLAIKNQWMTLLKEAKRLRREKKKAQIYDSKYGNDHENNN 420

Query: 421 HDHEMENDYDDNYDDGFESLFQYEDLDFEDENSGVPSIWSNGDFWTTNNVDISNDTDESH 480
           HDHEMENDYDD+YDDGFESLFQYEDLDFEDENSGVPSIWSNGDFWTTNNVDISND D  H
Sbjct: 421 HDHEMENDYDDDYDDGFESLFQYEDLDFEDENSGVPSIWSNGDFWTTNNVDISNDADGGH 480

Query: 481 IEPW 483
           IEPW
Sbjct: 481 IEPW 484

[Close]

BLAST of IVF0015743 vs. NCBI nr
Match: XP_038904265.1 (protein WHAT'S THIS FACTOR 1, chloroplastic [Benincasa hispida] >XP_038904305.1 protein WHAT'S THIS FACTOR 1, chloroplastic [Benincasa hispida])

HSP 1 Score: 877 bits (2267), Expect = 0.0
Identity = 438/484 (90.50%), Postives = 456/484 (94.21%), Query Frame = 0


Query: 1   MALSSHFLTPADWHASL-SSNLLSGSPLWLHSKVDLKCQRKENFITHYTLTPCSSIKIVR 60
           M LSSHFLTP DWH +L SSNLL G+PLWLHS V  K QRKENF T YTLTPCSS+KIVR
Sbjct: 1   MVLSSHFLTPTDWHVTLLSSNLLCGNPLWLHSNVSCKYQRKENFETRYTLTPCSSLKIVR 60

Query: 61  SRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSMIHRYP 120
           SRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSMIHRYP
Sbjct: 61  SRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSMIHRYP 120

Query: 121 SIFELFSIPYPPTPLNATKLYPQLCVRLTAAAASIAKQDSDLKLVISNTLAEKLQKLLML 180
           SIFELFSIPYPPTPLNATK+YPQLCVRLT AAAS+AKQDSDLKLVISNTLAEKLQKLLML
Sbjct: 121 SIFELFSIPYPPTPLNATKVYPQLCVRLTPAAASLAKQDSDLKLVISNTLAEKLQKLLML 180

Query: 181 SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVSWDPELAKPL 240
           SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVSWDPELAKPL
Sbjct: 181 SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVSWDPELAKPL 240

Query: 241 PCIQVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPDVCPYKTPASELAKES 300
           PC+QVPSRELIVDRPLKFNLLRLRKGLNLKR HQEFLIKFRDLPDVCPYKTPASELAKES
Sbjct: 241 PCLQVPSRELIVDRPLKFNLLRLRKGLNLKRAHQEFLIKFRDLPDVCPYKTPASELAKES 300

Query: 301 LESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR 360
           LESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR
Sbjct: 301 LESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR 360

Query: 361 DSVFLVEGFDDKGALLEKDETLAIKNRWMALLKEGKRMRREKKKAQIYDSKYGNDHENNN 420
           DSVFLVEGFD+KG L++KDETLAIKN+WM LL EGKRMR+EKKKA+ YDSKYGN+H+N+N
Sbjct: 361 DSVFLVEGFDEKGVLVKKDETLAIKNQWMKLLMEGKRMRQEKKKARKYDSKYGNEHKNDN 420

Query: 421 HDHEMENDYDDNYDDGFESLFQYEDLDFEDENSGVPSIWSNGDFWTTNNVDISNDTDESH 480
           HDHEME D+DD+YDDGFESLFQYEDLDFEDE S +PS W NGDFW TNNVDI ND D   
Sbjct: 421 HDHEMETDFDDDYDDGFESLFQYEDLDFEDERSDLPSNWLNGDFWITNNVDIINDADGGR 480

Query: 481 IEPW 483
           IEPW
Sbjct: 481 IEPW 484

[Close]

BLAST of IVF0015743 vs. NCBI nr
Match: XP_022955645.1 (protein WHAT'S THIS FACTOR 1 [Cucurbita moschata] >XP_022955646.1 protein WHAT'S THIS FACTOR 1 [Cucurbita moschata] >KAG7018490.1 Protein ROOT PRIMORDIUM DEFECTIVE 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 852 bits (2201), Expect = 7.59e-310
Identity = 431/485 (88.87%), Postives = 452/485 (93.20%), Query Frame = 0


Query: 1   MALSSHFLTPADWHA-SLSSNLLSGSPLWLHSKVDLKCQRKENFITHYTLTPCSSIKIVR 60
           MALSS FLTP DWH  SLSSNLL G+PLWLHS V  K QRKENF T YTLTP +S+KIVR
Sbjct: 1   MALSSQFLTPRDWHVTSLSSNLLCGTPLWLHSNVGCKYQRKENFKTCYTLTPRASVKIVR 60

Query: 61  SRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSMIHRYP 120
           SR LDRHAVKHNKTRFVQKLIILLLSKPKHYIP+HILSKCRGYLSLP+PRSLLSMIHRYP
Sbjct: 61  SRPLDRHAVKHNKTRFVQKLIILLLSKPKHYIPIHILSKCRGYLSLPKPRSLLSMIHRYP 120

Query: 121 SIFELFSIPYPPTPLNATKLYPQLCVRLTAAAASIAKQDSDLKLVISNTLAEKLQKLLML 180
           SIFELFSIPYPPTPLNATKLYPQLCVRLT  AAS+AKQDS+LKLVISNTLAEKLQKLLML
Sbjct: 121 SIFELFSIPYPPTPLNATKLYPQLCVRLTPVAASLAKQDSNLKLVISNTLAEKLQKLLML 180

Query: 181 SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVSWDPELAKPL 240
           SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELV WDPELAKPL
Sbjct: 181 SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVFWDPELAKPL 240

Query: 241 PCIQVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPDVCPYKTPASELAKES 300
           PC+QV SRELIVDRPLKFNLL+LRKGLNLKR HQEFLIKFRDLPDVCPYKTPASELAKES
Sbjct: 241 PCLQVSSRELIVDRPLKFNLLKLRKGLNLKRAHQEFLIKFRDLPDVCPYKTPASELAKES 300

Query: 301 LESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR 360
           LESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR
Sbjct: 301 LESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR 360

Query: 361 DSVFLVEGFDDKGALLEKDETLAIKNRWMALLKEGKRMRREKKKAQIYDSKYGNDHENNN 420
           DSVFLVEGF+DKG L+EKDETLAIKN+WM LL EGKRMRREK+KAQIYDS+YGNDHEN++
Sbjct: 361 DSVFLVEGFNDKGHLIEKDETLAIKNQWMKLLMEGKRMRREKRKAQIYDSRYGNDHENHS 420

Query: 421 HDHEMENDYDDNYDDGFESLFQYEDLDFEDENSGVPSIWSNGDFWTTNNV-DISNDTDES 480
           HDHEME DYDD+Y+DGFESLFQYEDLDFEDE S +PS  SNGDFWTTNN  DI N  +  
Sbjct: 421 HDHEMETDYDDDYEDGFESLFQYEDLDFEDEESDLPSNRSNGDFWTTNNAADIINGENGG 480

Query: 481 HIEPW 483
           HI+PW
Sbjct: 481 HIKPW 485

[Close]

BLAST of IVF0015743 vs. TAIR 10
Match: AT5G62990.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 502.3 bits (1292), Expect = 4.4e-142
Identity = 273/442 (61.76%), Postives = 330/442 (74.66%), Query Frame = 0


Query: 52  CSSIKIVRSRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSL 111
           CS+ KIVRS SLDRH VK N+ RFVQKL  LLLSKPKHYIP+ IL KCR YL +  P ++
Sbjct: 54  CSAHKIVRSPSLDRHVVKQNRVRFVQKLNTLLLSKPKHYIPIEILYKCRSYLCIENPLAI 113

Query: 112 LSMIHRYPSIFELFSIPYPPTPLNATKLYPQLCVRLTAAAASIAKQDSDLKLVISNTLAE 171
           LSMI RYP+IFELF+ P P  P+NATK   QLCVRLT+AA+S+A Q+ +LK  IS+ LA 
Sbjct: 114 LSMIRRYPTIFELFTTPTPHLPMNATKPLSQLCVRLTSAASSLAMQELNLKSEISDKLAT 173

Query: 172 KLQKLLMLSSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVSW 231
           KLQKLLMLSSH R+LLSKLVH+APD   PPNFRSRLCNDYP+KF+TVDTSYGRALELVS 
Sbjct: 174 KLQKLLMLSSHRRLLLSKLVHIAPDFGFPPNFRSRLCNDYPDKFKTVDTSYGRALELVSS 233

Query: 232 DPELAKPLPCIQVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPDVCPYKTP 291
           DPELA  +P  +V  R LIVDRPLKF  L LR+GLNLKR HQ FLIKFR+ PDVCPYK  
Sbjct: 234 DPELANQMPSPEV-DRGLIVDRPLKFKRLNLRRGLNLKRRHQGFLIKFRESPDVCPYKMS 293

Query: 292 ASELAKESLESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELF 351
           +  LA ES+E+EKRACAVVREVLG+ +EKRTLIDHLTHFRK+F LPNKLR +IVRHPELF
Sbjct: 294 SDYLASESIEAEKRACAVVREVLGLTVEKRTLIDHLTHFRKEFSLPNKLRDLIVRHPELF 353

Query: 352 YVSLKGQRDSVFLVEGFDDKGALLEKDETLAIKNRWMALLKEGKRMRREKKK--AQIYDS 411
           YVS+KG RDSVFLVE ++D G LL+KDE L I+ R + L++EGKR+RRE+++  A + D 
Sbjct: 354 YVSIKGMRDSVFLVEAYNDNGDLLDKDERLVIRERLIDLIQEGKRIRRERRRKGATLGDK 413

Query: 412 KYGNDHENNNHDHEMENDYDDNYDDGFESLFQYEDLDFE---DENSGVPSIWSNG---DF 471
                 +++    + ++D DD Y+DGFE+LF  EDL  E   DE         NG   ++
Sbjct: 414 SVEEKRKDDETIDDYDSDLDDEYEDGFENLFDSEDLGVEYHFDEEDDDDEAGVNGESVEY 473

Query: 472 WTTNNVDISNDTDE--SHIEPW 484
           W+       + +DE  S +E W
Sbjct: 474 WSRKLSSSGSSSDEANSAVESW 494

[Close]

BLAST of IVF0015743 vs. TAIR 10
Match: AT4G01037.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 220.3 bits (560), Expect = 3.3e-57
Identity = 144/406 (35.47%), Postives = 218/406 (53.69%), Query Frame = 0


Query: 53  SSIKIVRSRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLL 112
           +++K  +  + D    +  K + V  +  +L+S+P   + L  L K R  L L + R  +
Sbjct: 74  AAVKRRKELTFDSVVQRDKKLKLVLNIRKILVSQPDRMMSLRGLGKYRRDLGLKKRRRFI 133

Query: 113 SMIHRYPSIFELFSIPYPPTPLNATKLYPQLCVRLTAAAASIAKQDSDLKLVISNTLAEK 172
           +++ +YP +FE+             +    L  ++T+ A  +   +  ++  + + L  K
Sbjct: 134 ALLRKYPGVFEI-----------VEEGAYSLRFKMTSEAERLYLDEMRIRNELEDVLVVK 193

Query: 173 LQKLLMLSSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVSWD 232
           L+KL+M+S   RILL K+ HL  DL +P  FR  +C  YP+ FR V T  G ALEL  WD
Sbjct: 194 LRKLVMMSIDKRILLEKISHLKTDLGLPLEFRDTICQRYPQYFRVVPTPRGPALELTHWD 253

Query: 233 PELAKPLPCI--------QVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPD 292
           PELA     +        +   R LI+DRP KFN ++L +GLNL ++    + +FRD+  
Sbjct: 254 PELAVSAAELSEDDNRTRESEERNLIIDRPPKFNRVKLPRGLNLSKSETRKISQFRDMQY 313

Query: 293 VCPYKTPASELAKESLESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMI 352
           + PYK   S L   +LE EK AC V+ E+L +  EKRTL+DHLTHFR++F    +LRGM+
Sbjct: 314 ISPYK-DFSHLRSGTLEKEKHACGVIHELLSLTTEKRTLVDHLTHFREEFRFSQQLRGML 373

Query: 353 VRHPELFYVSLKGQRDSVFLVEGFDDKGALLEKDETLAIKNRWMALL-------KEGKRM 412
           +RHP+LFYVSLKG+RDSVFL E + +   L++KD    +K +  AL+       + G R 
Sbjct: 374 IRHPDLFYVSLKGERDSVFLREAYRN-SELIDKDPLTLVKEKMRALVSVPRFPRRGGPRK 433

Query: 413 RREKKKAQIYDSKYGNDHENNNHDHEMENDYD--------DNYDDG 436
             E ++ +I  S    + E    D E  +D D         N DDG
Sbjct: 434 DEEGREVEIDGSDADGEEEEEESDAEEWSDVDGYLEGEDGGNDDDG 466

[Close]

BLAST of IVF0015743 vs. TAIR 10
Match: AT3G63090.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 122.9 bits (307), Expect = 7.2e-28
Identity = 105/358 (29.33%), Postives = 173/358 (48.32%), Query Frame = 0


Query: 53  SSIKIV--RSRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRS 112
           SS+K+V  +   LD    +  + +   +++  +L++P   IPL  L K R  L L     
Sbjct: 32  SSLKVVWKKDTRLDEAIEQDKRYKLCARVVKEVLNEPGQVIPLRYLEKRRERLRLTFKAK 91

Query: 113 LLSMIHRYPSIFELFSIPYPPTPLNATKLYPQLCVRLTAAAASIAKQDSDLKLVISNTLA 172
             S +   PS+FE++     P      K  P   +R T    +   ++  +       L 
Sbjct: 92  --SFVEMNPSLFEIYYDRIKP------KSDPVQFLRPTPRLRAFLDEEQRIYSENEPLLV 151

Query: 173 EKLQKLLMLSSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFR-TVDTSYGRA-LEL 232
            KL +LLM++    I   KLVH+  D   P +F  +L   YP  FR T     G++ LEL
Sbjct: 152 SKLCQLLMMAKDKVISADKLVHVKRDFGFPNDFLMKLVQKYPNYFRLTGLPEEGKSFLEL 211

Query: 233 VSWDPELAKPLPCIQVPSRELIVDRPLKFNL-LRLRKGLNLKRTHQEFLIKFRDLPDVCP 292
           VSW+P+ AK    ++     L     ++ N  ++L  G  L++  +E+   + +   + P
Sbjct: 212 VSWNPDFAKSKIELRAEDETLKTGVRIRPNYNVKLPSGFFLRKEMREWTRDWLEQDYISP 271

Query: 293 YKTPASELAKESLESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRH 352
           Y+   S L + S E EKR   VV E+L + + KR  +  L  F  +F   N    +  RH
Sbjct: 272 YE-DVSHLDQASKEMEKRTVGVVHELLSLSLLKRVPVPTLGKFCDEFRFSNAFSSVFTRH 331

Query: 353 PELFYVSLKGQRDSVFLVEGFDDKGALLEKDETLAIKNRWMALLKEGKRMRREKKKAQ 406
             +FY+SLKG   +  L E + D   L+++D  LAIK++++ LL+EG + R+++ K Q
Sbjct: 332 SGIFYLSLKGGIKTAVLREAYKD-DELVDRDPLLAIKDKFLRLLEEGWQERKDRLKLQ 379

[Close]

BLAST of IVF0015743 vs. TAIR 10
Match: AT5G48040.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 122.5 bits (306), Expect = 9.4e-28
Identity = 112/387 (28.94%), Postives = 185/387 (47.80%), Query Frame = 0


Query: 55  IKIVRSRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSM 114
           +K V+ R LD   V+    R V  L+ ++ + P   +P+  L   RG L LP+   L + 
Sbjct: 37  LKWVKDRELDAVVVREKHLRAVCNLVSVISASPDLRLPIFKLLPHRGQLGLPQELKLSAF 96

Query: 115 IHRYPSIFELFSIPYPPTPLNATKLYPQLCVRLTAAAASIAKQDSDLKLVISNTLAEKLQ 174
           I RYP+IF    + +       T +    C  LT     +  ++ D+  V    +  +L 
Sbjct: 97  IRRYPNIF----VEHCYWDSAGTSV---PCFGLTRETIDLYYEEVDVSRVNERDVLVRLC 156

Query: 175 KLLMLSSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYG-RALELVSWDP 234
           KLLML+    + L  + HL  DL +P ++R  L   +P+ F  V  S     L+L+ WD 
Sbjct: 157 KLLMLTCERTLSLHSIDHLRWDLGLPYDYRDSLITKHPDLFSLVKLSSDLDGLKLIHWDE 216

Query: 235 ELAKPLPCIQVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPDVCPYKTPAS 294
            LA      Q+  RE + +       ++  +G  LKR   E+L +++ LP   PY   AS
Sbjct: 217 HLA----VSQMQLREDVGNDERMAFPVKFTRGFGLKRKSIEWLQEWQRLPYTSPY-VDAS 276

Query: 295 ELAKESLESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYV 354
            L   +  SEKR   V  E+L + I K+T   ++++ RK F LP K   +  RHP +FY+
Sbjct: 277 HLDPRTDLSEKRNVGVFHELLHLTIGKKTERKNVSNLRKPFALPQKFTKVFERHPGIFYI 336

Query: 355 SLKGQRDSVFLVEGFDDKGALLEKDETLAIKNRWMALLKEG--KRMRREKKKAQIYDSKY 414
           S+K    +V L E + D+  L+EK   + ++ ++  ++ EG   R R   +K+   D + 
Sbjct: 337 SMKCDTQTVILREAY-DRRHLIEKHPLVEVREKFANMMNEGFLDRSRGLYQKSVEADLEK 396

Query: 415 GNDHENNNHDHEMENDYDDNYDDGFES 439
            N   +     + E + D+N   G++S
Sbjct: 397 NNIKTSYPVWSDEEEELDNNLISGYDS 410

[Close]

BLAST of IVF0015743 vs. TAIR 10
Match: AT5G45790.2 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 115.9 bits (289), Expect = 8.8e-26
Identity = 99/370 (26.76%), Postives = 181/370 (48.92%), Query Frame = 0


Query: 59  RSRSLDRHAVKHNKTRFVQKLIILLLSKPK-HYIPLHILSKCRGYLSLPRPRSLLSMIHR 118
           R   LD+   +  K   + ++  L+ SK +  ++ L ++S+ +  + L    ++ + I +
Sbjct: 70  RDHQLDKIIPQIRKLNIILEISKLMSSKKRGPFVSLQLMSRWKNLVGL--NVNVGAFIGK 129

Query: 119 YPSIFELFSIPYPPTPLNATKLYPQLCVRLTAAAASIAKQDSDLKLVISNTLAEKLQKLL 178
           YP  FE+F+ P+             LC ++T     +  ++ ++         ++++KLL
Sbjct: 130 YPHAFEIFTHPFS----------KNLCCKITEKFKVLIDEEENVVRECEVDAVKRVKKLL 189

Query: 179 MLSSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVSWDPE--- 238
           +LS H  + +  L  +  +L +P +FR  +   Y  +FR VD      LELV  D E   
Sbjct: 190 LLSKHGVLRVHALRLIRKELGLPEDFRDSILAKYSSEFRLVDL---ETLELVDRDDESLC 249

Query: 239 LAKPLPCIQVPSRELIVDRPLKFNL---LRLRKGLNLKRTHQEFLIKFRDLPDVCPYKTP 298
           +AK     +V  RE  + +  + N    + L  G  +++  +E L  ++ +P V PY   
Sbjct: 250 VAKVEEWREVEYREKWLSK-FETNYAFPIHLPTGFKIEKGFREELKNWQRVPYVKPY--D 309

Query: 299 ASELAKESLESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELF 358
             E+++     EKR  AV+ E+L + +EK   ++ L HFRKD G+   +R +I++HP +F
Sbjct: 310 RKEISRGLERFEKRVVAVIHELLSLTVEKMVEVERLAHFRKDLGIEVNVREVILKHPGIF 369

Query: 359 YVSLKGQRDSVFLVEGFDDKGALLEKD----------ETLAIKNRW--MALLKEGKRMRR 410
           YVS KG   ++FL E +  KG L+E +          + + +K R+  M L +E +  R 
Sbjct: 370 YVSTKGSSQTLFLREAY-SKGCLIEPNPIYNVRRKMLDLVLLKTRYSRMLLQREDETHRE 420

The following BLAST results are available for this feature:

BLAST of IVF0015743 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B6TTV8	5.9e-59	36.07	Protein WHAT'S THIS FACTOR 1, chloroplastic OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=...	[more]
Q65XL5	1.1e-57	35.80	Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Oryza sativa subsp. japon...	[more]
A0MFS5	4.7e-56	35.47	Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3...	[more]
Q689D6	6.6e-18	25.13	Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1...	[more]
Q9ZUZ6	1.2e-16	23.92	Protein WHAT'S THIS FACTOR 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=W...	[more]

BLAST of IVF0015743 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BYB2	1.2e-277	100.00	protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo OX=3656 GN=LOC103494529 PE=4...	[more]
A0A5D3D0F7	1.2e-277	100.00	Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A5A7TP08	7.5e-275	98.96	Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6...	[more]
A0A0A0KU86	4.9e-266	95.66	PORR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G015830 PE=4 S...	[more]
A0A6J1GVP1	7.6e-243	88.87	protein WHAT'S THIS FACTOR 1 OS=Cucurbita moschata OX=3662 GN=LOC111457587 PE=4 ...	[more]

BLAST of IVF0015743 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008453967.1	0.0	100.00	PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo] >XP_016901446.1 PR...	[more]
KAA0044608.1	0.0	98.96	protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo var. makuwa]	[more]
XP_004152293.1	0.0	95.66	protein WHAT'S THIS FACTOR 1, chloroplastic [Cucumis sativus] >XP_031739932.1 pr...	[more]
XP_038904265.1	0.0	90.50	protein WHAT'S THIS FACTOR 1, chloroplastic [Benincasa hispida] >XP_038904305.1 ...	[more]
XP_022955645.1	7.59e-310	88.87	protein WHAT'S THIS FACTOR 1 [Cucurbita moschata] >XP_022955646.1 protein WHAT'S...	[more]

BLAST of IVF0015743 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G62990.1	4.4e-142	61.76	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT4G01037.1	3.3e-57	35.47	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT3G63090.1	7.2e-28	29.33	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT5G48040.1	9.4e-28	28.94	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT5G45790.2	8.8e-26	26.76	Ubiquitin carboxyl-terminal hydrolase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021099	Plant organelle RNA recognition domain	PFAM	PF11955	PORR	coord: 58..396 e-value: 7.2E-93 score: 311.1
IPR045040	PORR family	PANTHER	PTHR31476	PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC	coord: 25..447
None	No IPR available	PANTHER	PTHR31476:SF2	UBIQUITIN CARBOXYL-TERMINAL HYDROLASE FAMILY PROTEIN	coord: 25..447

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0015743.2	IVF0015743.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding