IVF0015738 (gene) Melon (IVF77) v1

Overview
NameIVF0015738
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionS4 RNA-binding domain-containing protein
Locationchr03: 20416734 .. 20424734 (-)
RNA-Seq ExpressionIVF0015738
SyntenyIVF0015738
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCCAATCGTATAAACACGAAGGCGAGTTCGCGAATTCAATAAACTGTTTCACAGAACAAGAATTTCCATTCAAGAAATGGTTTCATTAGCATCTTCTTCACTCTCATTTCTCTCAAAACCTTCGTTAATCTTCAACCGCATTCGCGCCATTCCTCGTATTTCATGTTCACTTTCATCCAATTCCACTCCCAACGCCTCCTCTTCATCTTCATTTGAGTTCAACATCACATTCGCTCCCCCAAAACCCAAGCCCAAATCCGATGTTGAAGACCCTTTTCAGTTCATCGATCGAAATACCGGCGGTCAGCTCTTCATTCCGTGGATAGTTCGCGGCGAAGATGGGAACCTCAAGCTCCAGTCTCATCCGCCTACACGGTTCCTTCATTCCATGTCGGAGGATGAAACCAAACCCAAGAAGAAGAAGGTTTCTGCTGGTAAACCCATAACCGAACCCCCTAAGCATTCGAAGGCTGCGCGAAGGTTTTATAATGAGAACATTAGGGAGTCGTCGCAACGTCTCAGTAAAGTTCTTGCTGCCGCTGGAGGTTTGTGCTTCTCTAACCAAAATGCTAATTCTGTTACTCTGCATTCCTTTCTGTGTTATGTGCTCTTTTCTTGTTGGTGTTTGGTTCTTGGCGTGGTGGGTAGAAGTCTTGTTATTTTCGGAAACTATTTAGTTATGTCGACAACAGGTTTTGGCAATAGGACGGAAGCAATAGGCATCTACTTCTAGTTTAGTTAGTAGAATTTGTAAGTATAATTGTCAAATCGGTGCTAATTTTGATTTACTTGGCATGAACTTCAAGTTATTCATTACACGTGGATAGAAATGGAGAGATTGAACAAACTGAGCGGTTTCTACACTAGTGTTATGCGGTATACTAGCTTAAATATGGTCTCCATCAACAACTATACTCCAAGAAAAAAGAATCAAAACAGCACGACGGACCCAGACTAACGAAGGCTCTAATAAATTGTGTAGAGGAAAATATAATAGGAGCTTAAGCTCTTGTTGGAATGCAACGTATGTGACTCTTTCTTTAGGGGCGGATCCTTTCAATTCGTTCAGTTGCATTCTTTCACGAGTGGATATATCTTTTCAAGTCTTAACCAACTTGAAGAAGGGTCATATTTTTTTAGAAACATTTGCTTTTATTGAGAAAGAACGAAATAATATAAGACAATAAAAAGAACCAAGCCCACAAAAGCTCTACCAAAAGAAAGAGTTTCCAACTAGGTAAAATAGTGCGAGAGTAACTTGAAGATGGGACATGATTATTTGGATGACCACTAATTAATCTATAGTATATATCTTATTCAAATTGGATCTTAACCTTTTTCACTAGTACTATTTTCAATGAGACTTTTTCACTTTTTATTTATGAAGTCGTTGACAATTGGTTTATTCTCCACAAAGTTGAATTAATTGGATATTGTGAACGAGGTACTGATTTGTTGGGCTTAGACTCTCTTCTGTGTACAAGGTTCGGTATTTTCTGATTTTTGGTGATATTATTCATATGACAGCTTCATAGAACACTAGGGCAGATGTTCTTTATTCAATTTAGTAAAAGAAACTTCAGTACAATGAAAGATGGACAGATTATCAATCTGGAAATAAAACACAAATACTATAAAAAAAAACCAGAACAACACTCTGTTATCCTTCTCTCAAGGATGAACTGCCCACTCACAAAATAACCAAAATCCCCCTCACAGACTCCTCTCCTTCCCTTAAACTACCCCTTCCCTCCTCAACCGTAAGACTCAAAAACTGTAAAAATAACAGCACTATCCTAACCGAAGACTAAATAGTAAAACAGTCCCCGAGTTCACCCCGAGATTGCCCCGAGTTACAACAATCCACCCTGAGATTGGCCGAGATTGTCTCGAGTTACAACATTTCACCCCGAGATTGTCCCGAGTTACATTAGAACTACCCAATAACTTCTGACATCTCTTTCTTCTTTCTCCTACTATATTGAAATAATATTGGAAGTCTAACACAGCTCTTCCATCTCGAACCTTCTATTATTCTTTGTTCTTGCAACATCTACTTACTTGTGGCCTTATATTTTTCTCACCGTCTATGCATACTTTCTGATTTTGCATGTTCGGTAGTCTGTGATCTTTTATTTGCTATTGGTTAGGTTTAAGGGAAATTCTTCTCTTTGAGTTCCATTCTCATAGTAAAACCACGAATGGCCGACTATGTAAATTGACATGTACCGTAAAAATGCGTTTGGCAGGCCATGGTAATAAGATCAATTGTTTATAAAATTAATGTTGGAACATGTTGGATAATGCGTTTTGTAAGCCATGGTGTACTCTCTCAAAGCTCTTCGGCAACTACAGCATCCAAAATCTAAATTTAAATGGAGTGCTTTTATTTTTACAGCTTGATAATGGATCTTTTGTCTTTATTGTACTGTTTTTGAATTCTCCTTCTTCTGCGTTACTATTACTTTGTATTAGATCTTTTAATAGTCAAGATTTTCATTTTGAAAGCTCCAGATTTATGAGGGCACTAAGGGGGTGTCAACCTAGTTGAGATGTTTGAGTGCGCTAGTTGATCCTTTATAAAAAGCTATTGTACAATCCACTCGTACTCTAAGCTTTTGTCTCATTTTGACTTATTAATAAAGAGACTTGTTTCCGTTAAAAAAAAACATTTGGCCCAAGAGAAAGAAAGAGGTAGAGATATCTTGTGGAGGTCTGGACTACAACCTGGTTAATATTTGCTCCCCTTTTGGTATTTGTTTTAAAAGTTGTATTTATCCTCTATCCATTCTCCCCAACAACTGGATCCTTTTTTACAATGGTAGGCACTTAAGTTGGAATCTTTCTATAGAATACCTTGTTGTTTCTAGCTAGCCTCAATCCCTGTTAGGACGGGGGCTGATGAAAATTCAGTTGTATACAATTTGGTCGAGCTTGTAAGGATAAATTTTTATTTTTATTTATTATTTTTTTTTTGTGTTCTATTGTTTAGCATTGGTCATGGAGTGTTCTGTTTCGTCTTCCTCTGCAGTGTCCTTTTATATATTAAAACAATTGCTTTCATTATGAAAAAAATGAAAGAATATAGTGGCGTACAAAAAAACAAGCCCACAAAATGAAAGGGTTCTAGCTAAGTAAATTGTTTCATAGAGCATAGTTTAAAAAAAAACTTCAAAACAGAAGCCTAAAGGGACACATAAAATCTCACCATAGATCAAAGCTCACAAGGGTTCTTGTCCCTACCGCTAAACACTCTATCATTCCTCTCCCTCAATATTCCAAACAATTGCACACACCCCAACAAGCCACAAAAAACTGTCTCTCTCTCTAAAAGGCGGATGGAGGAGAAACTTCTCGATTTCTGCACAAACATCTCTCTGCCCAGCAATGTCCTGTTTACAGTAATTACCATTGTGCTCTTAAGATCTCATAGTTGGTATTATACTCGTTTTTCAGTGGCATCAAGACGGAGTAGTGAAGAGCTTATATTTGGAGGCCGCGTTACTGTTAATGGTTCTGTTTGCAATACTCCTCAGGTTGGTTTTTATGTAATTTGGGTTGTATGGATTTTGTCTCAACTATGAAGGTATAAATGATTTCACCTTTCTGCAGACTCGGGTGGATCCTGCAAGAGACATTATTTACGTGAATGGAAATAGGCTTCCTAAGAAACTACCACCAAAAGTTTATCTAGCTCTGAACAAGCCAAAAGGGTAGGTCACTTATTCTCTAAGACCAATTTCCCTTTCCTACCCCAAGCTTCTCTTGGGAACTTGGCTTTTATGTTCTTCCGTTGCTAATCTATAAAGGAATGCCATGGCAGGTATATTTGTTCATCTGGGAAAAAAGAGTCAAAGTCTGTGATAAGTCTATTTGATGATTATTTGAAGAGTTGGGTACGTCAAACTCAAACCTACTGATCATACCGTTTTCAAGCAAAAGAGTGATAACCTTATGATCATTTTGATGGAAGAAATATAGTTTGCAAGTTATTGAACTACAACTTTGCATTTGCAGGATAAAACATATCCAGGGCAACCCAAACCACGGCTCTTTACAGTTGGCAGACTTGATGTTGCAACGACTGGGTTGATTATAGTGACAAATGATGGTATGCTATACATACTTCTCATGGTTGCCTCCTTATTTAGGATTGCTGTACAAAAGGTTTGGAGTTTAAAGGATAGATCTTGAACCCTTTGCAAAATTACCATTGGTTTTCTTTTTCAGGAGATTTTGCTCAAAGTATCTCACATCCTTCATCTGGTTTATCGAAGGAGTAAGTGATTTAAATTTATTTCCATACTCTTTCTAATGCATTGTAAAGGTAACTACAGAAGTAACTTCTGGCATTATTTTCAGGGAGTAATCTAGAGATAAACTGTTTTGAAAAAATCTTTGAGAGTATATATGAGGAATGATTGTGGGTTATGGCCTATAAATCTGTGGCGTATTTATTGAATGAAAATTACTGGAACCTTTATCTACTGACTATTTCAGGGATGAGAAATATTGTACCGATCTTCTTTTTTAGTTCTTTTTTCCTTATAATATTTTGCATTAGAGCATTTACTCTTTTATATTGTGCTTCCCAGTACATATAGCTTTTAAAGTTTTGAATGTTGGATTTCTGAAATATTAAAATGTAACATTTGCCCTCTATAATTGTAGATACATTGCAGCAATAGATGGCGATGTTAGTAAGCAGAACCTGATAGCAATTAGTGAGGGAACAACAATTGATGGTGTCCATTGCACACCGGATTCTGTGGAGTTGCTACCACGGCAGCCAGATATATCAAGGCCTCGTCTGCGTATCGTGGTGCTTTGTCCATTCATATTATATATTTTAAATATCTATTCACTTTCAGTGCGTTCATCACTTCTTGTTTGATCTAATTGGTCATGAAGTAATGATTATATAGAACAACAAAGTCTGCTGCCTTTTACCTTAAATGCTTTTCTTTATCTGTACTCTATTATTGTTGATGCCATACAGCAGTCTGTGGAGGAAAATTTATTAATACCATTTTTTCTGCATGCAGCGCTTGTCATGCATTAGCTTCCGACTAACTTATTGTGCTTTTGCAGGTACATGAAGGAAGGAACCATGAAGTTAGGGAACTTGTAAAAGCTGCTGGTCTAGAGGTTAGCATTTGTTCTGACCTTAGAAGACTGTGCCCATTGCTGTGAGGAAGAAGAAATGTTTCATTACTTTTCTCATGATACTTTCTTAACAATAACGATAAAATGAGGAAGAAGAAATGTTTCATTTCTTTCTGGGGGCATTGATGTATCTTTTTGTTCTTGTTGGTACCTCTGTACTGTAGGCCTTTGTTATAGGTAACTATAGTTCTTCATGAAATATTTTTTTTTGAACTTATAAATATAAACATGTATTTACCTACCTCGTGTGAGTTTTTTTCCTGCCATTTATTCATGATAGCTACACTATATACTGGGACATGAGGAAACTGGGAATATGACATCGAGGGAGATATCTTTTTAGTGCCATTTTAACTACTTGTTCTATTGCTTGCGTTTGTCTGCTAGTTCTATTTGCATGTGTAATTTCTGGAATTTATTGAAACAGATCTATTCTTTAAAGCGTGTAAGGATCGGTGGCTACAGACTTCCATCAGATTTGGGGTAATTTCTTGTTGTGATCACCTTTGATTTGTTTCTTATTTGTCAAACTTATTACTGTTTGGGAATGGGTACAAAATCAGATTAGATGATTCACTTACAAATCATTTTCACACAACAGAAACCAAGTAATAAAGGTAAATAATTTCTCCTATTTTGCATGTAAGTATTCGGAAATGTTGGTGACTAGTATGTTTCAGCATATTATAACTATGATATGCTGTCAGAAAACTAACCAAATAAAAACACCTTTTCAATTGAACAACGAAGATTTTAAAAGTTTATTCTTGAAGATAAATTGAAAATAAAACAATTTTAATCCTTAAAATAAAATTTATCACAAATCATGATCAGGTGGATATAATTCATTCTCTCTGTCCTCAGAGTCTTTCTTCAAGAATTCCCTTTTTATCTTTGGCCACAACCGTCAAGATTGTGCAACAAATTTTCATTTTTTTTACAGTTTTTCGGGGTGAAACTAGAAAGACTTTGAAGTTTTAGCTGCTTACTTGTGAACATGAGTGAGATAAATGTGTTGGCATGTAGATTTATTAAAAATTTCTGCATTATTTCAGGCTTGGAAGTTACACTGAACTAAAGCAAAGTGACCTGAAGGCAATTGGTTGGAAAAGTTGAGTTTCTGATGATTTCAGAGTCGTCCATAGTTGTTGAAGCTTGAATGTGGTAGGAATGATTTCAGACATACCACATGGAAGCCGAGTACTACTTCTCTAACTGCTGGGACAGTATCGACATTTGAAGAGGTTGGATGCTGTTTATTCCAGCTCACGCTTCACACCATGGCCACTGATTATTTAGAATTATGCTTGAGTTGAAGATTTCAATCAACAACATTGAAGGTGCAGGTTGTCAACCATCAAATTTTATAGATAATACGAATGACGTGCGATACCATTCTATTATCCAATTATTCTCATCTCATTGTGTATTATACTGAACAGTAAAGGAACATACAGGTAGTTGCAATGATGCTTTTTCTCTCACCTCACTGAAAGCGAGTGTGGGAGGGTATTCTAACACCCGGCCTTAATCTTGTATTCATTACTCATATATGACTTCACATTTAATTATATTCTTTTCTCAACTCTCTTTAGTCATCTACTCCTGCTTACAAACGCTTCCAGCAGATGCATAGTATCAACATTGCGGACAGATGAGGTTTCTGTATGAAGCTCATAGAAAAGCTTCGTTTAGCAAAGAAATATCTTATATGGATTGCAAGTTCAACATGCTCTGACTTTGAAAGCTTGTATGTTAGAAGGTAAGAGCCTTTACTGACAATATCCTTTCATTTTGTTCTTAACAAAAAAAAAAAAAAAAAAAAAAATCCGTTCATTTTGTTGTTTTTATCTCTTGCATCTATGCCTAATAGAATACAACATATAGTACGAATTTTCCTGGTCTCTATATGACTGTCATCCTATAAGTCTTCTGACTAGTTTTATGTTCTCGATATATTACGCTTCATTTGATTGAAATAAGATTTGCAGTACTGGATCATGTTAAACTAGAAAACTGAAATAAGGATGATCGAAAACAATACTTGAACGGAATGGGGGATTGGAAACAATTTCAAATAAAATATCCAGTGAGTGGGGTGGGGGGGGGGGGGGGGGGGGGCAATAAAAAATCCAAGACGAGCCGATGTGCAACCCAATCAGTTGAAAAAAATACAAATGCACCATAGGGTAGCAGGGTGACATAAAAGGATAGAAGAATAGATAGTTGTAAAACGGATTGACGTTGCAAGAAACCCACACATAAGGGGAAAACTAAACAAAGCAACAATCCCATACACCCCAAAAGCAGGAGAGGAATCAAGCCAAAAACACTCATAGGTAACTCATCACAAAGCCAAAAAGAGGAAGGGAGATATCACAGAGCTAGTAATGGCGTTCAAACCGACAAAGACTCCTCTCGAAGCAAAGATCTAGCCGTTTAATCAAAAGAGATAGAGCTTTCTAGCTTAACTTTCTATTCAGTCCAGCAATTCATTCTTTTTTTTCAAGGTCCATGTTCTTTCTAAAATAACTTGAGATCTGGGAACATGGATTTTGCTCTAATCCCACATATCCAAGACCATAACTGGCCTATTTCTTAGCTTTGTAACTTGTTAGCTTAACTTTCTATTTAGTCCTGCTAGCTTCAATTTTATTAAGATCTATGTACTATTTGAAATAACTTGAGATCTGGTAACATGGTTTTTGTCCAAATTCCAGCTTGCACCGACTACAAACAAAACTGCCATCCCATATCAGCTGAATGAAGCAACAGAAAACAAACGGACAGCAGAGCAGAGCCTCTCTTGTTCTACAGTAGCAACAGAATCGTCC

mRNA sequence

CTCCAATCGTATAAACACGAAGGCGAGTTCGCGAATTCAATAAACTGTTTCACAGAACAAGAATTTCCATTCAAGAAATGGTTTCATTAGCATCTTCTTCACTCTCATTTCTCTCAAAACCTTCGTTAATCTTCAACCGCATTCGCGCCATTCCTCGTATTTCATGTTCACTTTCATCCAATTCCACTCCCAACGCCTCCTCTTCATCTTCATTTGAGTTCAACATCACATTCGCTCCCCCAAAACCCAAGCCCAAATCCGATGTTGAAGACCCTTTTCAGTTCATCGATCGAAATACCGGCGGTCAGCTCTTCATTCCGTGGATAGTTCGCGGCGAAGATGGGAACCTCAAGCTCCAGTCTCATCCGCCTACACGGTTCCTTCATTCCATGTCGGAGGATGAAACCAAACCCAAGAAGAAGAAGGTTTCTGCTGGTAAACCCATAACCGAACCCCCTAAGCATTCGAAGGCTGCGCGAAGGTTTTATAATGAGAACATTAGGGAGTCGTCGCAACGTCTCAGTAAAGTTCTTGCTGCCGCTGGAGTGGCATCAAGACGGAGTAGTGAAGAGCTTATATTTGGAGGCCGCGTTACTGTTAATGGTTCTGTTTGCAATACTCCTCAGACTCGGGTGGATCCTGCAAGAGACATTATTTACGTGAATGGAAATAGGCTTCCTAAGAAACTACCACCAAAAGTTTATCTAGCTCTGAACAAGCCAAAAGGGTATATTTGTTCATCTGGGAAAAAAGAGTCAAAGTCTGTGATAAGTCTATTTGATGATTATTTGAAGAGTTGGGATAAAACATATCCAGGGCAACCCAAACCACGGCTCTTTACAGTTGGCAGACTTGATGTTGCAACGACTGGGTTGATTATAGTGACAAATGATGGAGATTTTGCTCAAAGTATCTCACATCCTTCATCTGGTTTATCGAAGGAATACATTGCAGCAATAGATGGCGATGTTAGTAAGCAGAACCTGATAGCAATTAGTGAGGGAACAACAATTGATGGTGTCCATTGCACACCGGATTCTGTGGAGTTGCTACCACGGCAGCCAGATATATCAAGGCCTCGTCTGCGTATCGTGGTACATGAAGGAAGGAACCATGAAGTTAGGGAACTTGTAAAAGCTGCTGGTCTAGAGATCTATTCTTTAAAGCGTGTAAGGATCGGTGGCTACAGACTTCCATCAGATTTGGGGCTTGGAAGTTACACTGAACTAAAGCAAAGTGACCTGAAGGCAATTGGTTGGAAAAGTTGAGTTTCTGATGATTTCAGAGTCGTCCATAGTTGTTGAAGCTTGAATGTGGTAGGAATGATTTCAGACATACCACATGGAAGCCGAGTACTACTTCTCTAACTGCTGGGACAGTATCGACATTTGAAGAGGTTGGATGCTGTTTATTCCAGCTCACGCTTCACACCATGGCCACTGATTATTTAGAATTATGCTTGAGTTGAAGATTTCAATCAACAACATTGAAGGTGCAGGTTGTCAACCATCAAATTTTATAGATAATACGAATGACGTGCGATACCATTCTATTATCCAATTATTCTCATCTCATTGTGTATTATACTGAACAGTAAAGGAACATACAGATGCATAGTATCAACATTGCGGACAGATGAGGTTTCTGTATGAAGCTCATAGAAAAGCTTCGTTTAGCAAAGAAATATCTTATATGGATTGCAAGTTCAACATGCTCTGACTTTGAAAGCTTGTATGTTAGAAGCTTGCACCGACTACAAACAAAACTGCCATCCCATATCAGCTGAATGAAGCAACAGAAAACAAACGGACAGCAGAGCAGAGCCTCTCTTGTTCTACAGTAGCAACAGAATCGTCC

Coding sequence (CDS)

ATGGTTTCATTAGCATCTTCTTCACTCTCATTTCTCTCAAAACCTTCGTTAATCTTCAACCGCATTCGCGCCATTCCTCGTATTTCATGTTCACTTTCATCCAATTCCACTCCCAACGCCTCCTCTTCATCTTCATTTGAGTTCAACATCACATTCGCTCCCCCAAAACCCAAGCCCAAATCCGATGTTGAAGACCCTTTTCAGTTCATCGATCGAAATACCGGCGGTCAGCTCTTCATTCCGTGGATAGTTCGCGGCGAAGATGGGAACCTCAAGCTCCAGTCTCATCCGCCTACACGGTTCCTTCATTCCATGTCGGAGGATGAAACCAAACCCAAGAAGAAGAAGGTTTCTGCTGGTAAACCCATAACCGAACCCCCTAAGCATTCGAAGGCTGCGCGAAGGTTTTATAATGAGAACATTAGGGAGTCGTCGCAACGTCTCAGTAAAGTTCTTGCTGCCGCTGGAGTGGCATCAAGACGGAGTAGTGAAGAGCTTATATTTGGAGGCCGCGTTACTGTTAATGGTTCTGTTTGCAATACTCCTCAGACTCGGGTGGATCCTGCAAGAGACATTATTTACGTGAATGGAAATAGGCTTCCTAAGAAACTACCACCAAAAGTTTATCTAGCTCTGAACAAGCCAAAAGGGTATATTTGTTCATCTGGGAAAAAAGAGTCAAAGTCTGTGATAAGTCTATTTGATGATTATTTGAAGAGTTGGGATAAAACATATCCAGGGCAACCCAAACCACGGCTCTTTACAGTTGGCAGACTTGATGTTGCAACGACTGGGTTGATTATAGTGACAAATGATGGAGATTTTGCTCAAAGTATCTCACATCCTTCATCTGGTTTATCGAAGGAATACATTGCAGCAATAGATGGCGATGTTAGTAAGCAGAACCTGATAGCAATTAGTGAGGGAACAACAATTGATGGTGTCCATTGCACACCGGATTCTGTGGAGTTGCTACCACGGCAGCCAGATATATCAAGGCCTCGTCTGCGTATCGTGGTACATGAAGGAAGGAACCATGAAGTTAGGGAACTTGTAAAAGCTGCTGGTCTAGAGATCTATTCTTTAAAGCGTGTAAGGATCGGTGGCTACAGACTTCCATCAGATTTGGGGCTTGGAAGTTACACTGAACTAAAGCAAAGTGACCTGAAGGCAATTGGTTGGAAAAGTTGA

Protein sequence

MVSLASSSLSFLSKPSLIFNRIRAIPRISCSLSSNSTPNASSSSSFEFNITFAPPKPKPKSDVEDPFQFIDRNTGGQLFIPWIVRGEDGNLKLQSHPPTRFLHSMSEDETKPKKKKVSAGKPITEPPKHSKAARRFYNENIRESSQRLSKVLAAAGVASRRSSEELIFGGRVTVNGSVCNTPQTRVDPARDIIYVNGNRLPKKLPPKVYLALNKPKGYICSSGKKESKSVISLFDDYLKSWDKTYPGQPKPRLFTVGRLDVATTGLIIVTNDGDFAQSISHPSSGLSKEYIAAIDGDVSKQNLIAISEGTTIDGVHCTPDSVELLPRQPDISRPRLRIVVHEGRNHEVRELVKAAGLEIYSLKRVRIGGYRLPSDLGLGSYTELKQSDLKAIGWKS
Homology
[Close]
BLAST of IVF0015738 vs. ExPASy Swiss-Prot
Match: Q8L960 (Putative ribosomal large subunit pseudouridine synthase SVR1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SVR1 PE=1 SV=1)

HSP 1 Score: 510.8 bits (1314), Expect = 1.4e-143
Identity = 275/422 (65.17%), Postives = 315/422 (74.64%), Query Frame = 0 

Query: 5   ASSSLSFLSKPSLIFNRIRAIP---------RISCSLSSNSTPNASSSSSFEFNITFAPP 64
           ASSS+SF +     F +I+A P          + CS+SS      SSS   EF+I+FAPP
Sbjct: 6   ASSSISFAAS----FLKIKAFPLSPRFFPIRTLRCSVSS------SSSEPIEFDISFAPP 65

Query: 65  KPKPKSDVEDPFQFIDRNTGGQLFIPWIVRGEDGNLKLQSHPPTRFLHSMSEDET--KPK 124
           KPKP S            T  QLFIPWIVR +DG LKLQS PP R +H+++ D T   PK
Sbjct: 66  KPKPSSTHGGV-------TPQQLFIPWIVRSDDGTLKLQSQPPARLIHNLAIDATTQNPK 125

Query: 125 KKKVS----------------AGKPITE---PPKHSKAARRFYNENIRESSQRLSKVLAA 184
           KK  S                A  P +     PK SKAARRFYNEN +E  QRLSKVLAA
Sbjct: 126 KKDKSKKKQPQATSSSSATTTASSPASHSEVKPKLSKAARRFYNENFKEQPQRLSKVLAA 185

Query: 185 AGVASRRSSEELIFGGRVTVNGSVCNTPQTRVDPARDIIYVNGNRLPKKLPPKVYLALNK 244
           AGVASRR+SEELIF G+VTVNG +CNTPQTRVDP+RDIIYVNGNR+PKKLPPKVY ALNK
Sbjct: 186 AGVASRRTSEELIFDGKVTVNGILCNTPQTRVDPSRDIIYVNGNRIPKKLPPKVYFALNK 245

Query: 245 PKGYICSSGKKESKSVISLFDDYLKSWDKTYPGQPKPRLFTVGRLDVATTGLIIVTNDGD 304
           PKGYICSSG+KE KS ISLFD+YL SWDK  PG PKPRLFTVGRLDVATTGLI+VTNDGD
Sbjct: 246 PKGYICSSGEKEIKSAISLFDEYLSSWDKRNPGTPKPRLFTVGRLDVATTGLIVVTNDGD 305

Query: 305 FAQSISHPSSGLSKEYIAAIDGDVSKQNLIAISEGTTIDGVHCTPDSVELLPRQPDISRP 364
           FAQ +SHPSS L KEYI  + GD+ K++L+AISEGT ++GVHC PDSVEL+P+Q DI R 
Sbjct: 306 FAQKLSHPSSSLPKEYITTVVGDIHKRHLMAISEGTMVEGVHCVPDSVELMPKQHDIPRA 365

Query: 365 RLRIVVHEGRNHEVRELVKAAGLEIYSLKRVRIGGYRLPSDLGLGSYTELKQSDLKAIGW 397
           RLRIVVHEGRNHEVRELVK AGLE++SLKRVRIGG+RLPSDLGLG + ELKQS+LKA+GW
Sbjct: 366 RLRIVVHEGRNHEVRELVKNAGLEVHSLKRVRIGGFRLPSDLGLGKHVELKQSELKALGW 410

[Close]
BLAST of IVF0015738 vs. ExPASy Swiss-Prot
Match: O67444 (Uncharacterized RNA pseudouridine synthase aq_1464 OS=Aquifex aeolicus (strain VF5) OX=224324 GN=aq_1464 PE=3 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 1.6e-33
Identity = 94/255 (36.86%), Postives = 137/255 (53.73%), Query Frame = 0 

Query: 147 RLSKVLAAAGVASRRSSEELIFGGRVTVNGSVCNTPQTRVDPARDIIYVNGNRLPKKLPP 206
           R++K L+ AGVASRR +E+LI  GRV VNG V  +   +V+P  DI+ V+G   P K   
Sbjct: 5   RINKFLSEAGVASRRKAEKLILEGRVKVNGEVVRSLGVKVNPEVDIVEVDGK--PVKPQR 64

Query: 207 KVYLALNKPKGYICSSGKKES--KSVISLFDDYLKSWDKTYPGQPKPRLFTVGRLDVATT 266
           K Y+ LNKP  Y+   G+     K++  L  D               R+F VGRLD  T 
Sbjct: 65  KRYIILNKPCCYLTQLGRSPDGRKTIEELIKDI------------PERVFPVGRLDYNTE 124

Query: 267 GLIIVTNDGDFAQSISHPSSGLSKEYIAAIDGDVSKQNLIAISEGTTIDGVHCTPDSVEL 326
           GL+I+TNDG+ A  I HP   L K Y+A ++G V ++ L  + +G  ++     PD++ +
Sbjct: 125 GLLILTNDGELANRILHPRYKLPKVYLALVEGKVDQKTLKRMKQGIELEDGFAKPDNIRI 184

Query: 327 LPRQPDISRPRLRIVVHEGRNHEVRELVKAAGLEIYSLKRVRIGGYRLPSDLGLGSYTEL 386
           +  + +     L I  HEGR H V+  + A G ++  LKR+ IG  +L   L  G + EL
Sbjct: 185 V--RYEGKNTLLEITFHEGRKHLVKRFLGAFGHKVKRLKRIAIGPIKL-GKLSPGKWREL 242

Query: 387 KQSDL----KAIGWK 396
            Q +L    KA+G K
Sbjct: 245 NQGELAQLFKAVGLK 242

[Close]
BLAST of IVF0015738 vs. ExPASy Swiss-Prot
Match: P35159 (Ribosomal large subunit pseudouridine synthase B OS=Bacillus subtilis (strain 168) OX=224308 GN=rluB PE=1 SV=2)

HSP 1 Score: 133.7 bits (335), Expect = 4.7e-30
Identity = 84/247 (34.01%), Postives = 131/247 (53.04%), Query Frame = 0 

Query: 146 QRLSKVLAAAGVASRRSSEELIFGGRVTVNGSVCNTPQTRVDPARDIIYVNGNRLPKKLP 205
           +RL KV+A AGVASRR +EELI  G+V VNG V      +V    D I VNG ++ ++ P
Sbjct: 2   ERLQKVIAHAGVASRRKAEELIKEGKVKVNGKVVTELGVKV-TGSDQIEVNGLKVEREEP 61

Query: 206 PKVYLALNKPKGYICSSGKKESKSVISLFDDYLKSWDKTYPGQPKPRLFTVGRLDVATTG 265
             VY  L KP+G I ++   + + V++   D+ K+  +        R++ +GRLD  T+G
Sbjct: 62  --VYFLLYKPRGVISAAQDDKGRKVVT---DFFKNIPQ--------RIYPIGRLDYDTSG 121

Query: 266 LIIVTNDGDFAQSISHPSSGLSKEYIAAIDGDVSKQNLIAISEGTTIDGVHCTPDSVELL 325
           L+++TNDG+FA  + HP   + K Y+A + G   K+ L  +  G  ++     P   +LL
Sbjct: 122 LLLLTNDGEFANKLMHPKYEIDKTYVAKVKGIPPKELLRKLERGIRLEEGKTAPAKAKLL 181

Query: 326 PRQPDISRPRLRIVVHEGRNHEVRELVKAAGLEIYSLKRVRIGGYRLPSDLGLGSYTELK 385
                     +++ +HEGRN +VR + +A G E+  LKR       L   L  G   EL 
Sbjct: 182 SLDKKKQTSIIQLTIHEGRNRQVRRMFEAIGHEVIKLKREEYAFLNL-RGLHTGDARELT 233

Query: 386 QSDLKAI 393
             ++K +
Sbjct: 242 PHEVKRL 233

[Close]
BLAST of IVF0015738 vs. ExPASy Swiss-Prot
Match: Q9HZ55 (Ribosomal large subunit pseudouridine synthase B OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=rluB PE=3 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 2.0e-28
Identity = 87/247 (35.22%), Postives = 128/247 (51.82%), Query Frame = 0 

Query: 146 QRLSKVLAAAGVASRRSSEELIFGGRVTVNGSVCNTPQTRVDPARDIIYVNGNRLPKKLP 205
           ++L KVLA  GV SRR  E  I  GRV VNGSV +  Q RVD + D I V+G+ + ++  
Sbjct: 14  EKLQKVLARLGVGSRRDVEVWIAEGRVNVNGSVASLGQ-RVD-SHDAITVDGHLIRREEA 73

Query: 206 P---KVYLALNKPKGYICSSGKKESKSVISLFDDYLKSWDKTYPGQPKPRLFTVGRLDVA 265
               +  L  NKP+G +C+    E +  I  FD          P     R   VGRLD+ 
Sbjct: 74  AESVRRVLIYNKPEGEVCTRDDPEGRPTI--FD--------RLPRLRTGRWINVGRLDIN 133

Query: 266 TTGLIIVTNDGDFAQSISHPSSGLSKEYIAAIDGDVSKQNLIAISEGTTIDGVHCTPDSV 325
           TTGL++ T DG+ A  + HPS  + +EY   + G+V+++ +  +  G  ++        +
Sbjct: 134 TTGLLLFTTDGELANRLMHPSYEMDREYAVRVRGEVTEEMIERLLNGVMLEDGPAKFSDI 193

Query: 326 ELLPRQPDISRPRLRIVVHEGRNHEVRELVKAAGLEIYSLKRVRIGGYRLPSDLGLGSYT 385
           +  P     +      VV EGRN EVR L ++ GL +  LKRVR G   L S+L +G Y 
Sbjct: 194 QQAPGGEGFNH-WYHCVVMEGRNREVRRLWESQGLVVSRLKRVRFGPVFLTSELTMGRYR 247

Query: 386 ELKQSDL 390
           E+ Q ++
Sbjct: 254 EMDQREI 247

[Close]
BLAST of IVF0015738 vs. ExPASy Swiss-Prot
Match: O66829 (Uncharacterized RNA pseudouridine synthase aq_554 OS=Aquifex aeolicus (strain VF5) OX=224324 GN=aq_554 PE=3 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 2.0e-28
Identity = 80/247 (32.39%), Postives = 131/247 (53.04%), Query Frame = 0 

Query: 147 RLSKVLAAAGVASRRSSEELIFGGRVTVNGSVCNTPQTRVDPARDIIYVNGNRLPKKLPP 206
           RL K L+ +   SR+ ++ELI  GRV V+G V    + RV    ++     +  PKK   
Sbjct: 2   RLDKYLSKSLHISRKEAKELIREGRVKVSGKVVKQAEYRVKEGEEVEVEGKSVKPKK--- 61

Query: 207 KVYLALNKPKGYICSSGK-KESKSVISLFDDYLKSWDKTYPGQPKPRLFTVGRLDVATTG 266
            VYL L KPKGY+ ++ + K+  S + L  ++           P  +LF+ GRLDV   G
Sbjct: 62  NVYLMLYKPKGYLSTTEEDKKYPSFLELIREHF----------PSRKLFSAGRLDVDAEG 121

Query: 267 LIIVTNDGDFAQSISHPSSGLSKEYIAAIDGDVSKQNLIAISEGTTIDGVHCTPDSVELL 326
           L+++T+DG+ A  ++HP   + KEYI  +D D+  + L  + E      V      V+L+
Sbjct: 122 LLLITDDGELAHRLTHPKWKVEKEYIVRLDRDIGDEELKKLYE------VKLEEKPVQLV 181

Query: 327 PRQPDISRPRLRIVVHEGRNHEVRELVKAAGLEIYSLKRVRIGGYRLPSDLGLGSYTELK 386
            +   +S   ++ ++ EGR+H V+ L KA G  +  LKR R+G  RL  ++  G + EL 
Sbjct: 182 -KAEKLSGDTVKAILTEGRHHVVKRLFKAVGHNVVYLKRTRVGNLRLDENMEPGEWRELT 228

Query: 387 QSDLKAI 393
           + ++K +
Sbjct: 242 EEEVKEL 228

[Close]
BLAST of IVF0015738 vs. ExPASy TrEMBL
Match: A0A1S3C3I9 (uncharacterized RNA pseudouridine synthase aq_1464 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496448 PE=3 SV=1)

HSP 1 Score: 782.3 bits (2019), Expect = 9.3e-223
Identity = 396/396 (100.00%), Postives = 396/396 (100.00%), Query Frame = 0 

Query: 1   MVSLASSSLSFLSKPSLIFNRIRAIPRISCSLSSNSTPNASSSSSFEFNITFAPPKPKPK 60
           MVSLASSSLSFLSKPSLIFNRIRAIPRISCSLSSNSTPNASSSSSFEFNITFAPPKPKPK
Sbjct: 1   MVSLASSSLSFLSKPSLIFNRIRAIPRISCSLSSNSTPNASSSSSFEFNITFAPPKPKPK 60

Query: 61  SDVEDPFQFIDRNTGGQLFIPWIVRGEDGNLKLQSHPPTRFLHSMSEDETKPKKKKVSAG 120
           SDVEDPFQFIDRNTGGQLFIPWIVRGEDGNLKLQSHPPTRFLHSMSEDETKPKKKKVSAG
Sbjct: 61  SDVEDPFQFIDRNTGGQLFIPWIVRGEDGNLKLQSHPPTRFLHSMSEDETKPKKKKVSAG 120

Query: 121 KPITEPPKHSKAARRFYNENIRESSQRLSKVLAAAGVASRRSSEELIFGGRVTVNGSVCN 180
           KPITEPPKHSKAARRFYNENIRESSQRLSKVLAAAGVASRRSSEELIFGGRVTVNGSVCN
Sbjct: 121 KPITEPPKHSKAARRFYNENIRESSQRLSKVLAAAGVASRRSSEELIFGGRVTVNGSVCN 180

Query: 181 TPQTRVDPARDIIYVNGNRLPKKLPPKVYLALNKPKGYICSSGKKESKSVISLFDDYLKS 240
           TPQTRVDPARDIIYVNGNRLPKKLPPKVYLALNKPKGYICSSGKKESKSVISLFDDYLKS
Sbjct: 181 TPQTRVDPARDIIYVNGNRLPKKLPPKVYLALNKPKGYICSSGKKESKSVISLFDDYLKS 240

Query: 241 WDKTYPGQPKPRLFTVGRLDVATTGLIIVTNDGDFAQSISHPSSGLSKEYIAAIDGDVSK 300
           WDKTYPGQPKPRLFTVGRLDVATTGLIIVTNDGDFAQSISHPSSGLSKEYIAAIDGDVSK
Sbjct: 241 WDKTYPGQPKPRLFTVGRLDVATTGLIIVTNDGDFAQSISHPSSGLSKEYIAAIDGDVSK 300

Query: 301 QNLIAISEGTTIDGVHCTPDSVELLPRQPDISRPRLRIVVHEGRNHEVRELVKAAGLEIY 360
           QNLIAISEGTTIDGVHCTPDSVELLPRQPDISRPRLRIVVHEGRNHEVRELVKAAGLEIY
Sbjct: 301 QNLIAISEGTTIDGVHCTPDSVELLPRQPDISRPRLRIVVHEGRNHEVRELVKAAGLEIY 360

Query: 361 SLKRVRIGGYRLPSDLGLGSYTELKQSDLKAIGWKS 397
           SLKRVRIGGYRLPSDLGLGSYTELKQSDLKAIGWKS
Sbjct: 361 SLKRVRIGGYRLPSDLGLGSYTELKQSDLKAIGWKS 396

[Close]
BLAST of IVF0015738 vs. ExPASy TrEMBL
Match: A0A1S4E166 (ribosomal large subunit pseudouridine synthase B isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496448 PE=3 SV=1)

HSP 1 Score: 743.8 bits (1919), Expect = 3.7e-211
Identity = 377/377 (100.00%), Postives = 377/377 (100.00%), Query Frame = 0 

Query: 1   MVSLASSSLSFLSKPSLIFNRIRAIPRISCSLSSNSTPNASSSSSFEFNITFAPPKPKPK 60
           MVSLASSSLSFLSKPSLIFNRIRAIPRISCSLSSNSTPNASSSSSFEFNITFAPPKPKPK
Sbjct: 1   MVSLASSSLSFLSKPSLIFNRIRAIPRISCSLSSNSTPNASSSSSFEFNITFAPPKPKPK 60

Query: 61  SDVEDPFQFIDRNTGGQLFIPWIVRGEDGNLKLQSHPPTRFLHSMSEDETKPKKKKVSAG 120
           SDVEDPFQFIDRNTGGQLFIPWIVRGEDGNLKLQSHPPTRFLHSMSEDETKPKKKKVSAG
Sbjct: 61  SDVEDPFQFIDRNTGGQLFIPWIVRGEDGNLKLQSHPPTRFLHSMSEDETKPKKKKVSAG 120

Query: 121 KPITEPPKHSKAARRFYNENIRESSQRLSKVLAAAGVASRRSSEELIFGGRVTVNGSVCN 180
           KPITEPPKHSKAARRFYNENIRESSQRLSKVLAAAGVASRRSSEELIFGGRVTVNGSVCN
Sbjct: 121 KPITEPPKHSKAARRFYNENIRESSQRLSKVLAAAGVASRRSSEELIFGGRVTVNGSVCN 180

Query: 181 TPQTRVDPARDIIYVNGNRLPKKLPPKVYLALNKPKGYICSSGKKESKSVISLFDDYLKS 240
           TPQTRVDPARDIIYVNGNRLPKKLPPKVYLALNKPKGYICSSGKKESKSVISLFDDYLKS
Sbjct: 181 TPQTRVDPARDIIYVNGNRLPKKLPPKVYLALNKPKGYICSSGKKESKSVISLFDDYLKS 240

Query: 241 WDKTYPGQPKPRLFTVGRLDVATTGLIIVTNDGDFAQSISHPSSGLSKEYIAAIDGDVSK 300
           WDKTYPGQPKPRLFTVGRLDVATTGLIIVTNDGDFAQSISHPSSGLSKEYIAAIDGDVSK
Sbjct: 241 WDKTYPGQPKPRLFTVGRLDVATTGLIIVTNDGDFAQSISHPSSGLSKEYIAAIDGDVSK 300

Query: 301 QNLIAISEGTTIDGVHCTPDSVELLPRQPDISRPRLRIVVHEGRNHEVRELVKAAGLEIY 360
           QNLIAISEGTTIDGVHCTPDSVELLPRQPDISRPRLRIVVHEGRNHEVRELVKAAGLEIY
Sbjct: 301 QNLIAISEGTTIDGVHCTPDSVELLPRQPDISRPRLRIVVHEGRNHEVRELVKAAGLEIY 360

Query: 361 SLKRVRIGGYRLPSDLG 378
           SLKRVRIGGYRLPSDLG
Sbjct: 361 SLKRVRIGGYRLPSDLG 377

[Close]
BLAST of IVF0015738 vs. ExPASy TrEMBL
Match: A0A6J1BVE6 (putative ribosomal large subunit pseudouridine synthase SVR1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111006060 PE=3 SV=1)

HSP 1 Score: 707.6 bits (1825), Expect = 2.9e-200
Identity = 363/399 (90.98%), Postives = 375/399 (93.98%), Query Frame = 0 

Query: 1   MVSLAS--SSLSFLSKPSLIFNRIRAIPRISCSLSSNSTPNASSSSSFEFNITFAPPKPK 60
           M SLA+  SSLS LSKPS I N IRAIPRISCSLSSNS PNASSSS  EFNITFAPPKPK
Sbjct: 1   MASLAAALSSLSILSKPSFILNPIRAIPRISCSLSSNSAPNASSSSPLEFNITFAPPKPK 60

Query: 61  PKSDVEDPFQFIDRNTGGQLFIPWIVRGEDGNLKLQSHPPTRFLHSMSEDETKPKKKKVS 120
           PKS+++ PFQFID NTGGQL IPWIVRGEDGNL+LQSHPPTRFL SMSE ETKP++KK S
Sbjct: 61  PKSEIQHPFQFIDPNTGGQLLIPWIVRGEDGNLQLQSHPPTRFLQSMSEAETKPRRKKGS 120

Query: 121 AGKPITE-PPKHSKAARRFYNENIRESSQRLSKVLAAAGVASRRSSEELIFGGRVTVNGS 180
           A K + E PPKHSKAARRFYNENIR+SSQRLSKVLAAAGVASRRSSEELIF GRVTVNGS
Sbjct: 121 ADKRVPEPPPKHSKAARRFYNENIRDSSQRLSKVLAAAGVASRRSSEELIFEGRVTVNGS 180

Query: 181 VCNTPQTRVDPARDIIYVNGNRLPKKLPPKVYLALNKPKGYICSSGKKESKSVISLFDDY 240
           VCNTPQTRVDPARD+IYVNGNRLPKKLPPKVYLALNKPKGYICSSGKKESKSVISLFDDY
Sbjct: 181 VCNTPQTRVDPARDVIYVNGNRLPKKLPPKVYLALNKPKGYICSSGKKESKSVISLFDDY 240

Query: 241 LKSWDKTYPGQPKPRLFTVGRLDVATTGLIIVTNDGDFAQSISHPSSGLSKEYIAAIDGD 300
           LKSWDKTYPGQPKPRLFTVGRLDVATTGLIIVTNDGDFAQSISHPSSGLSKEYIAAIDG 
Sbjct: 241 LKSWDKTYPGQPKPRLFTVGRLDVATTGLIIVTNDGDFAQSISHPSSGLSKEYIAAIDGA 300

Query: 301 VSKQNLIAISEGTTIDGVHCTPDSVELLPRQPDISRPRLRIVVHEGRNHEVRELVKAAGL 360
           VSKQNLIAISEGT IDGVHCTPDSVELLPRQPD+SR RLRIVVHEGRNHEVRELVKAAGL
Sbjct: 301 VSKQNLIAISEGTIIDGVHCTPDSVELLPRQPDVSRSRLRIVVHEGRNHEVRELVKAAGL 360

Query: 361 EIYSLKRVRIGGYRLPSDLGLGSYTELKQSDLKAIGWKS 397
           EIYSLKRVRIGG+RLPSDLGLGSYTELKQSDLKAIGWKS
Sbjct: 361 EIYSLKRVRIGGFRLPSDLGLGSYTELKQSDLKAIGWKS 399

[Close]
BLAST of IVF0015738 vs. ExPASy TrEMBL
Match: A0A6J1GVH4 (putative ribosomal large subunit pseudouridine synthase SVR1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111457913 PE=3 SV=1)

HSP 1 Score: 696.0 bits (1795), Expect = 8.8e-197
Identity = 357/398 (89.70%), Postives = 369/398 (92.71%), Query Frame = 0 

Query: 1   MVSLASSSLSFLSKPSLIFNRIRAIPRISCSLSSNSTPN--ASSSSSFEFNITFAPPKPK 60
           MVSLA+SSLS LSKPSLI N IRAI RISCSLSSNS PN  +SSSSS EFNITFAPP PK
Sbjct: 1   MVSLAASSLSVLSKPSLILNPIRAISRISCSLSSNSAPNGSSSSSSSLEFNITFAPPTPK 60

Query: 61  PKSDVEDPFQFIDRNTGGQLFIPWIVRGEDGNLKLQSHPPTRFLHSMSEDETKPKKKKVS 120
           PKS  +D FQFID+NTGGQLFIPWIVRGEDGNLKLQSHPPTRFLHSMSE E KPKKKKVS
Sbjct: 61  PKSKTDDSFQFIDQNTGGQLFIPWIVRGEDGNLKLQSHPPTRFLHSMSEAEAKPKKKKVS 120

Query: 121 AGKPITEPPKHSKAARRFYNENIRESSQRLSKVLAAAGVASRRSSEELIFGGRVTVNGSV 180
             K + EPPK+SKAARRFYNENIR+SSQRLSKVLAAAGVASRRSSEELIF GRVTVNGSV
Sbjct: 121 VDKRVPEPPKYSKAARRFYNENIRDSSQRLSKVLAAAGVASRRSSEELIFEGRVTVNGSV 180

Query: 181 CNTPQTRVDPARDIIYVNGNRLPKKLPPKVYLALNKPKGYICSSGKKESKSVISLFDDYL 240
           CNTPQTRVDPARDIIYVNGNRLPKKLP KVYLALNKPKGYICSSGKKESKSVI+LFDDYL
Sbjct: 181 CNTPQTRVDPARDIIYVNGNRLPKKLPSKVYLALNKPKGYICSSGKKESKSVINLFDDYL 240

Query: 241 KSWDKTYPGQPKPRLFTVGRLDVATTGLIIVTNDGDFAQSISHPSSGLSKEYIAAIDGDV 300
           KSW KTYPGQPKPRLFTVGRLDVATTGLIIVTNDGDFAQSISHPSSG+SKEYIAAIDG V
Sbjct: 241 KSWHKTYPGQPKPRLFTVGRLDVATTGLIIVTNDGDFAQSISHPSSGISKEYIAAIDGAV 300

Query: 301 SKQNLIAISEGTTIDGVHCTPDSVELLPRQPDISRPRLRIVVHEGRNHEVRELVKAAGLE 360
           SKQNLI ISEGT IDGVHC PD+VELLP+QPDI R RLRI VHEGRNHEVRELVKAAGLE
Sbjct: 301 SKQNLITISEGTVIDGVHCIPDAVELLPQQPDIPRSRLRITVHEGRNHEVRELVKAAGLE 360

Query: 361 IYSLKRVRIGGYRLPSDLGLGSYTELKQSDLKAIGWKS 397
           IYSLKRVRIGG+RLPSDLGLGSY ELKQSDLKAIGWKS
Sbjct: 361 IYSLKRVRIGGFRLPSDLGLGSYIELKQSDLKAIGWKS 398

[Close]
BLAST of IVF0015738 vs. ExPASy TrEMBL
Match: A0A6J1JT41 (putative ribosomal large subunit pseudouridine synthase SVR1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111487252 PE=3 SV=1)

HSP 1 Score: 694.1 bits (1790), Expect = 3.3e-196
Identity = 356/398 (89.45%), Postives = 368/398 (92.46%), Query Frame = 0 

Query: 1   MVSLASSSLSFLSKPSLIFNRIRAIPRISCSLSSNSTPN--ASSSSSFEFNITFAPPKPK 60
           MVSLA+SSLS LSKPSLI N IRAI RISCSLSSNS PN  +SSSSS EFNITFAPP PK
Sbjct: 1   MVSLAASSLSVLSKPSLILNPIRAISRISCSLSSNSAPNGSSSSSSSMEFNITFAPPTPK 60

Query: 61  PKSDVEDPFQFIDRNTGGQLFIPWIVRGEDGNLKLQSHPPTRFLHSMSEDETKPKKKKVS 120
           PKS  +D FQFID+NTGGQLFIPWIVRGEDGNLKLQSHPPTRFLHSMSE E KPKKKKVS
Sbjct: 61  PKSKTDDSFQFIDQNTGGQLFIPWIVRGEDGNLKLQSHPPTRFLHSMSEAEAKPKKKKVS 120

Query: 121 AGKPITEPPKHSKAARRFYNENIRESSQRLSKVLAAAGVASRRSSEELIFGGRVTVNGSV 180
             K + EPPK+SKAARRFYNENIR+SSQRLSKVLAAAGVASRRSSEELIF GRVTVNGSV
Sbjct: 121 VDKRVPEPPKYSKAARRFYNENIRDSSQRLSKVLAAAGVASRRSSEELIFEGRVTVNGSV 180

Query: 181 CNTPQTRVDPARDIIYVNGNRLPKKLPPKVYLALNKPKGYICSSGKKESKSVISLFDDYL 240
           CNTPQTRVDPARDIIYVNGNRLPKKLP KVYLALNKPKGYICSSGKKESKSVI+LFDDYL
Sbjct: 181 CNTPQTRVDPARDIIYVNGNRLPKKLPSKVYLALNKPKGYICSSGKKESKSVINLFDDYL 240

Query: 241 KSWDKTYPGQPKPRLFTVGRLDVATTGLIIVTNDGDFAQSISHPSSGLSKEYIAAIDGDV 300
           KSW KTYPGQPKPRLFTVGRLDVATTGLIIVTNDGDFAQSISHPSSG+SKEYIAAIDG V
Sbjct: 241 KSWHKTYPGQPKPRLFTVGRLDVATTGLIIVTNDGDFAQSISHPSSGISKEYIAAIDGAV 300

Query: 301 SKQNLIAISEGTTIDGVHCTPDSVELLPRQPDISRPRLRIVVHEGRNHEVRELVKAAGLE 360
           SKQNLI ISEGT IDGVHC PD+VELLP+QPDI R RLRI VHEGRNHEVRELVKAAGLE
Sbjct: 301 SKQNLITISEGTVIDGVHCIPDAVELLPQQPDIPRSRLRITVHEGRNHEVRELVKAAGLE 360

Query: 361 IYSLKRVRIGGYRLPSDLGLGSYTELKQSDLKAIGWKS 397
           IYSLKRVRIGG+RLPSDLGLGSY ELKQ DLKAIGWKS
Sbjct: 361 IYSLKRVRIGGFRLPSDLGLGSYIELKQCDLKAIGWKS 398

[Close]
BLAST of IVF0015738 vs. NCBI nr
Match: XP_008456519.1 (PREDICTED: uncharacterized RNA pseudouridine synthase aq_1464 isoform X1 [Cucumis melo])

HSP 1 Score: 780 bits (2015), Expect = 1.77e-284
Identity = 396/396 (100.00%), Postives = 396/396 (100.00%), Query Frame = 0 

Query: 1   MVSLASSSLSFLSKPSLIFNRIRAIPRISCSLSSNSTPNASSSSSFEFNITFAPPKPKPK 60
           MVSLASSSLSFLSKPSLIFNRIRAIPRISCSLSSNSTPNASSSSSFEFNITFAPPKPKPK
Sbjct: 1   MVSLASSSLSFLSKPSLIFNRIRAIPRISCSLSSNSTPNASSSSSFEFNITFAPPKPKPK 60

Query: 61  SDVEDPFQFIDRNTGGQLFIPWIVRGEDGNLKLQSHPPTRFLHSMSEDETKPKKKKVSAG 120
           SDVEDPFQFIDRNTGGQLFIPWIVRGEDGNLKLQSHPPTRFLHSMSEDETKPKKKKVSAG
Sbjct: 61  SDVEDPFQFIDRNTGGQLFIPWIVRGEDGNLKLQSHPPTRFLHSMSEDETKPKKKKVSAG 120

Query: 121 KPITEPPKHSKAARRFYNENIRESSQRLSKVLAAAGVASRRSSEELIFGGRVTVNGSVCN 180
           KPITEPPKHSKAARRFYNENIRESSQRLSKVLAAAGVASRRSSEELIFGGRVTVNGSVCN
Sbjct: 121 KPITEPPKHSKAARRFYNENIRESSQRLSKVLAAAGVASRRSSEELIFGGRVTVNGSVCN 180

Query: 181 TPQTRVDPARDIIYVNGNRLPKKLPPKVYLALNKPKGYICSSGKKESKSVISLFDDYLKS 240
           TPQTRVDPARDIIYVNGNRLPKKLPPKVYLALNKPKGYICSSGKKESKSVISLFDDYLKS
Sbjct: 181 TPQTRVDPARDIIYVNGNRLPKKLPPKVYLALNKPKGYICSSGKKESKSVISLFDDYLKS 240

Query: 241 WDKTYPGQPKPRLFTVGRLDVATTGLIIVTNDGDFAQSISHPSSGLSKEYIAAIDGDVSK 300
           WDKTYPGQPKPRLFTVGRLDVATTGLIIVTNDGDFAQSISHPSSGLSKEYIAAIDGDVSK
Sbjct: 241 WDKTYPGQPKPRLFTVGRLDVATTGLIIVTNDGDFAQSISHPSSGLSKEYIAAIDGDVSK 300

Query: 301 QNLIAISEGTTIDGVHCTPDSVELLPRQPDISRPRLRIVVHEGRNHEVRELVKAAGLEIY 360
           QNLIAISEGTTIDGVHCTPDSVELLPRQPDISRPRLRIVVHEGRNHEVRELVKAAGLEIY
Sbjct: 301 QNLIAISEGTTIDGVHCTPDSVELLPRQPDISRPRLRIVVHEGRNHEVRELVKAAGLEIY 360

Query: 361 SLKRVRIGGYRLPSDLGLGSYTELKQSDLKAIGWKS 396
           SLKRVRIGGYRLPSDLGLGSYTELKQSDLKAIGWKS
Sbjct: 361 SLKRVRIGGYRLPSDLGLGSYTELKQSDLKAIGWKS 396

[Close]
BLAST of IVF0015738 vs. NCBI nr
Match: XP_004140075.1 (putative ribosomal large subunit pseudouridine synthase SVR1, chloroplastic [Cucumis sativus] >KGN48104.2 hypothetical protein Csa_003766 [Cucumis sativus])

HSP 1 Score: 745 bits (1923), Expect = 2.00e-270
Identity = 381/398 (95.73%), Postives = 387/398 (97.24%), Query Frame = 0 

Query: 1   MVSLASSSLSFLSKPSLIFNRIRAIPRISCSLSSNSTPNASSSSS--FEFNITFAPPKPK 60
           MVSLASSSL  LSKPSLIFN IRAIPRISCSLSSNS PNASSSSS   EFNITFAPPKPK
Sbjct: 1   MVSLASSSLLLLSKPSLIFNPIRAIPRISCSLSSNSKPNASSSSSSSLEFNITFAPPKPK 60

Query: 61  PKSDVEDPFQFIDRNTGGQLFIPWIVRGEDGNLKLQSHPPTRFLHSMSEDETKPKKKKVS 120
           PKS+VEDPFQFIDRN+GGQLFIPWIVRGEDGNLKLQSHPPTRFLHS+SEDETKPKKKKVS
Sbjct: 61  PKSEVEDPFQFIDRNSGGQLFIPWIVRGEDGNLKLQSHPPTRFLHSVSEDETKPKKKKVS 120

Query: 121 AGKPITEPPKHSKAARRFYNENIRESSQRLSKVLAAAGVASRRSSEELIFGGRVTVNGSV 180
           AGKPITEPPKHSKAARRFYNENIRESSQRLSKVLAAAGVASRRSSEELIFGGRVTVNGSV
Sbjct: 121 AGKPITEPPKHSKAARRFYNENIRESSQRLSKVLAAAGVASRRSSEELIFGGRVTVNGSV 180

Query: 181 CNTPQTRVDPARDIIYVNGNRLPKKLPPKVYLALNKPKGYICSSGKKESKSVISLFDDYL 240
           CNTPQTRVDPARDIIYVNGNRLPKKLPPKVYLALNKPKGYICSSGKKESKSVISLFDDYL
Sbjct: 181 CNTPQTRVDPARDIIYVNGNRLPKKLPPKVYLALNKPKGYICSSGKKESKSVISLFDDYL 240

Query: 241 KSWDKTYPGQPKPRLFTVGRLDVATTGLIIVTNDGDFAQSISHPSSGLSKEYIAAIDGDV 300
           KSWDKTYPGQPKPRLFTVGRLDVATTGLIIVTNDGDFAQ ISHPSSGLSKEYIAAIDG V
Sbjct: 241 KSWDKTYPGQPKPRLFTVGRLDVATTGLIIVTNDGDFAQGISHPSSGLSKEYIAAIDGTV 300

Query: 301 SKQNLIAISEGTTIDGVHCTPDSVELLPRQPDISRPRLRIVVHEGRNHEVRELVKAAGLE 360
           SKQNLIAISEGT IDGVHCTPDSVELLPRQPDIS+ RLRIVVHEGRNHEVRELVKAAGLE
Sbjct: 301 SKQNLIAISEGTIIDGVHCTPDSVELLPRQPDISKSRLRIVVHEGRNHEVRELVKAAGLE 360

Query: 361 IYSLKRVRIGGYRLPSDLGLGSYTELKQSDLKAIGWKS 396
           IYSLKRVRIGG+RLPSDLGLGSYTELKQS+LKAIGWKS
Sbjct: 361 IYSLKRVRIGGFRLPSDLGLGSYTELKQSELKAIGWKS 398

[Close]
BLAST of IVF0015738 vs. NCBI nr
Match: XP_016901969.1 (PREDICTED: ribosomal large subunit pseudouridine synthase B isoform X2 [Cucumis melo])

HSP 1 Score: 742 bits (1916), Expect = 1.06e-269
Identity = 377/377 (100.00%), Postives = 377/377 (100.00%), Query Frame = 0 

Query: 1   MVSLASSSLSFLSKPSLIFNRIRAIPRISCSLSSNSTPNASSSSSFEFNITFAPPKPKPK 60
           MVSLASSSLSFLSKPSLIFNRIRAIPRISCSLSSNSTPNASSSSSFEFNITFAPPKPKPK
Sbjct: 1   MVSLASSSLSFLSKPSLIFNRIRAIPRISCSLSSNSTPNASSSSSFEFNITFAPPKPKPK 60

Query: 61  SDVEDPFQFIDRNTGGQLFIPWIVRGEDGNLKLQSHPPTRFLHSMSEDETKPKKKKVSAG 120
           SDVEDPFQFIDRNTGGQLFIPWIVRGEDGNLKLQSHPPTRFLHSMSEDETKPKKKKVSAG
Sbjct: 61  SDVEDPFQFIDRNTGGQLFIPWIVRGEDGNLKLQSHPPTRFLHSMSEDETKPKKKKVSAG 120

Query: 121 KPITEPPKHSKAARRFYNENIRESSQRLSKVLAAAGVASRRSSEELIFGGRVTVNGSVCN 180
           KPITEPPKHSKAARRFYNENIRESSQRLSKVLAAAGVASRRSSEELIFGGRVTVNGSVCN
Sbjct: 121 KPITEPPKHSKAARRFYNENIRESSQRLSKVLAAAGVASRRSSEELIFGGRVTVNGSVCN 180

Query: 181 TPQTRVDPARDIIYVNGNRLPKKLPPKVYLALNKPKGYICSSGKKESKSVISLFDDYLKS 240
           TPQTRVDPARDIIYVNGNRLPKKLPPKVYLALNKPKGYICSSGKKESKSVISLFDDYLKS
Sbjct: 181 TPQTRVDPARDIIYVNGNRLPKKLPPKVYLALNKPKGYICSSGKKESKSVISLFDDYLKS 240

Query: 241 WDKTYPGQPKPRLFTVGRLDVATTGLIIVTNDGDFAQSISHPSSGLSKEYIAAIDGDVSK 300
           WDKTYPGQPKPRLFTVGRLDVATTGLIIVTNDGDFAQSISHPSSGLSKEYIAAIDGDVSK
Sbjct: 241 WDKTYPGQPKPRLFTVGRLDVATTGLIIVTNDGDFAQSISHPSSGLSKEYIAAIDGDVSK 300

Query: 301 QNLIAISEGTTIDGVHCTPDSVELLPRQPDISRPRLRIVVHEGRNHEVRELVKAAGLEIY 360
           QNLIAISEGTTIDGVHCTPDSVELLPRQPDISRPRLRIVVHEGRNHEVRELVKAAGLEIY
Sbjct: 301 QNLIAISEGTTIDGVHCTPDSVELLPRQPDISRPRLRIVVHEGRNHEVRELVKAAGLEIY 360

Query: 361 SLKRVRIGGYRLPSDLG 377
           SLKRVRIGGYRLPSDLG
Sbjct: 361 SLKRVRIGGYRLPSDLG 377

[Close]
BLAST of IVF0015738 vs. NCBI nr
Match: XP_038884576.1 (putative ribosomal large subunit pseudouridine synthase SVR1, chloroplastic [Benincasa hispida])

HSP 1 Score: 736 bits (1901), Expect = 4.51e-267
Identity = 377/398 (94.72%), Postives = 384/398 (96.48%), Query Frame = 0 

Query: 1   MVSLASSSLSFLSKPSLIFNRIRAIPRISCSLSSNSTPNASSSSS--FEFNITFAPPKPK 60
           MVSLASSSLSFLSKPS I N IRAIPRISCSLSSNSTPNASSSSS   EFNITFAPPKPK
Sbjct: 1   MVSLASSSLSFLSKPSFILNPIRAIPRISCSLSSNSTPNASSSSSSSLEFNITFAPPKPK 60

Query: 61  PKSDVEDPFQFIDRNTGGQLFIPWIVRGEDGNLKLQSHPPTRFLHSMSEDETKPKKKKVS 120
           PKS+VE PFQFIDRNTGGQLFIPWIVRGEDGNLKLQSHPPTRFLHSMSEDETKPKKKKVS
Sbjct: 61  PKSEVEGPFQFIDRNTGGQLFIPWIVRGEDGNLKLQSHPPTRFLHSMSEDETKPKKKKVS 120

Query: 121 AGKPITEPPKHSKAARRFYNENIRESSQRLSKVLAAAGVASRRSSEELIFGGRVTVNGSV 180
           A K  TEPPKHSKAARRFYNENIR++SQRLSKVLAAAGVASRRSSEELIF GRVTVNGSV
Sbjct: 121 ADKRPTEPPKHSKAARRFYNENIRDASQRLSKVLAAAGVASRRSSEELIFEGRVTVNGSV 180

Query: 181 CNTPQTRVDPARDIIYVNGNRLPKKLPPKVYLALNKPKGYICSSGKKESKSVISLFDDYL 240
           CNTPQTRVDPARD+IYVNGNRLPKKLP KVYLALNKPKGYICSSGKKESKSVISLFDDYL
Sbjct: 181 CNTPQTRVDPARDVIYVNGNRLPKKLPQKVYLALNKPKGYICSSGKKESKSVISLFDDYL 240

Query: 241 KSWDKTYPGQPKPRLFTVGRLDVATTGLIIVTNDGDFAQSISHPSSGLSKEYIAAIDGDV 300
           KSWDKTYPGQPKPRLFTVGRLDVATTGLI+VTNDGDFAQSISHPSSGLSKEYIAAIDG V
Sbjct: 241 KSWDKTYPGQPKPRLFTVGRLDVATTGLILVTNDGDFAQSISHPSSGLSKEYIAAIDGAV 300

Query: 301 SKQNLIAISEGTTIDGVHCTPDSVELLPRQPDISRPRLRIVVHEGRNHEVRELVKAAGLE 360
           SKQNLIAISEGT IDG+HCTPDSVELLPRQPDISRPRLRIVVHEGRNHEVRELVKAAGLE
Sbjct: 301 SKQNLIAISEGTIIDGIHCTPDSVELLPRQPDISRPRLRIVVHEGRNHEVRELVKAAGLE 360

Query: 361 IYSLKRVRIGGYRLPSDLGLGSYTELKQSDLKAIGWKS 396
           IYSLKRVRIGG+RLPSDLGLGSYTELKQSDLKAIGWKS
Sbjct: 361 IYSLKRVRIGGFRLPSDLGLGSYTELKQSDLKAIGWKS 398

[Close]
BLAST of IVF0015738 vs. NCBI nr
Match: XP_022133495.1 (putative ribosomal large subunit pseudouridine synthase SVR1, chloroplastic [Momordica charantia])

HSP 1 Score: 706 bits (1821), Expect = 7.24e-255
Identity = 363/399 (90.98%), Postives = 375/399 (93.98%), Query Frame = 0 

Query: 1   MVSLAS--SSLSFLSKPSLIFNRIRAIPRISCSLSSNSTPNASSSSSFEFNITFAPPKPK 60
           M SLA+  SSLS LSKPS I N IRAIPRISCSLSSNS PNASSSS  EFNITFAPPKPK
Sbjct: 1   MASLAAALSSLSILSKPSFILNPIRAIPRISCSLSSNSAPNASSSSPLEFNITFAPPKPK 60

Query: 61  PKSDVEDPFQFIDRNTGGQLFIPWIVRGEDGNLKLQSHPPTRFLHSMSEDETKPKKKKVS 120
           PKS+++ PFQFID NTGGQL IPWIVRGEDGNL+LQSHPPTRFL SMSE ETKP++KK S
Sbjct: 61  PKSEIQHPFQFIDPNTGGQLLIPWIVRGEDGNLQLQSHPPTRFLQSMSEAETKPRRKKGS 120

Query: 121 AGKPITEPP-KHSKAARRFYNENIRESSQRLSKVLAAAGVASRRSSEELIFGGRVTVNGS 180
           A K + EPP KHSKAARRFYNENIR+SSQRLSKVLAAAGVASRRSSEELIF GRVTVNGS
Sbjct: 121 ADKRVPEPPPKHSKAARRFYNENIRDSSQRLSKVLAAAGVASRRSSEELIFEGRVTVNGS 180

Query: 181 VCNTPQTRVDPARDIIYVNGNRLPKKLPPKVYLALNKPKGYICSSGKKESKSVISLFDDY 240
           VCNTPQTRVDPARD+IYVNGNRLPKKLPPKVYLALNKPKGYICSSGKKESKSVISLFDDY
Sbjct: 181 VCNTPQTRVDPARDVIYVNGNRLPKKLPPKVYLALNKPKGYICSSGKKESKSVISLFDDY 240

Query: 241 LKSWDKTYPGQPKPRLFTVGRLDVATTGLIIVTNDGDFAQSISHPSSGLSKEYIAAIDGD 300
           LKSWDKTYPGQPKPRLFTVGRLDVATTGLIIVTNDGDFAQSISHPSSGLSKEYIAAIDG 
Sbjct: 241 LKSWDKTYPGQPKPRLFTVGRLDVATTGLIIVTNDGDFAQSISHPSSGLSKEYIAAIDGA 300

Query: 301 VSKQNLIAISEGTTIDGVHCTPDSVELLPRQPDISRPRLRIVVHEGRNHEVRELVKAAGL 360
           VSKQNLIAISEGT IDGVHCTPDSVELLPRQPD+SR RLRIVVHEGRNHEVRELVKAAGL
Sbjct: 301 VSKQNLIAISEGTIIDGVHCTPDSVELLPRQPDVSRSRLRIVVHEGRNHEVRELVKAAGL 360

Query: 361 EIYSLKRVRIGGYRLPSDLGLGSYTELKQSDLKAIGWKS 396
           EIYSLKRVRIGG+RLPSDLGLGSYTELKQSDLKAIGWKS
Sbjct: 361 EIYSLKRVRIGGFRLPSDLGLGSYTELKQSDLKAIGWKS 399

[Close]
BLAST of IVF0015738 vs. TAIR 10
Match: AT2G39140.1 (pseudouridine synthase family protein )

HSP 1 Score: 510.8 bits (1314), Expect = 1.0e-144
Identity = 275/422 (65.17%), Postives = 315/422 (74.64%), Query Frame = 0 

Query: 5   ASSSLSFLSKPSLIFNRIRAIP---------RISCSLSSNSTPNASSSSSFEFNITFAPP 64
           ASSS+SF +     F +I+A P          + CS+SS      SSS   EF+I+FAPP
Sbjct: 6   ASSSISFAAS----FLKIKAFPLSPRFFPIRTLRCSVSS------SSSEPIEFDISFAPP 65

Query: 65  KPKPKSDVEDPFQFIDRNTGGQLFIPWIVRGEDGNLKLQSHPPTRFLHSMSEDET--KPK 124
           KPKP S            T  QLFIPWIVR +DG LKLQS PP R +H+++ D T   PK
Sbjct: 66  KPKPSSTHGGV-------TPQQLFIPWIVRSDDGTLKLQSQPPARLIHNLAIDATTQNPK 125

Query: 125 KKKVS----------------AGKPITE---PPKHSKAARRFYNENIRESSQRLSKVLAA 184
           KK  S                A  P +     PK SKAARRFYNEN +E  QRLSKVLAA
Sbjct: 126 KKDKSKKKQPQATSSSSATTTASSPASHSEVKPKLSKAARRFYNENFKEQPQRLSKVLAA 185

Query: 185 AGVASRRSSEELIFGGRVTVNGSVCNTPQTRVDPARDIIYVNGNRLPKKLPPKVYLALNK 244
           AGVASRR+SEELIF G+VTVNG +CNTPQTRVDP+RDIIYVNGNR+PKKLPPKVY ALNK
Sbjct: 186 AGVASRRTSEELIFDGKVTVNGILCNTPQTRVDPSRDIIYVNGNRIPKKLPPKVYFALNK 245

Query: 245 PKGYICSSGKKESKSVISLFDDYLKSWDKTYPGQPKPRLFTVGRLDVATTGLIIVTNDGD 304
           PKGYICSSG+KE KS ISLFD+YL SWDK  PG PKPRLFTVGRLDVATTGLI+VTNDGD
Sbjct: 246 PKGYICSSGEKEIKSAISLFDEYLSSWDKRNPGTPKPRLFTVGRLDVATTGLIVVTNDGD 305

Query: 305 FAQSISHPSSGLSKEYIAAIDGDVSKQNLIAISEGTTIDGVHCTPDSVELLPRQPDISRP 364
           FAQ +SHPSS L KEYI  + GD+ K++L+AISEGT ++GVHC PDSVEL+P+Q DI R 
Sbjct: 306 FAQKLSHPSSSLPKEYITTVVGDIHKRHLMAISEGTMVEGVHCVPDSVELMPKQHDIPRA 365

Query: 365 RLRIVVHEGRNHEVRELVKAAGLEIYSLKRVRIGGYRLPSDLGLGSYTELKQSDLKAIGW 397
           RLRIVVHEGRNHEVRELVK AGLE++SLKRVRIGG+RLPSDLGLG + ELKQS+LKA+GW
Sbjct: 366 RLRIVVHEGRNHEVRELVKNAGLEVHSLKRVRIGGFRLPSDLGLGKHVELKQSELKALGW 410

[Close]
BLAST of IVF0015738 vs. TAIR 10
Match: AT3G43340.1 (Pseudouridine synthase family protein )

HSP 1 Score: 116.7 bits (291), Expect = 4.2e-26
Identity = 56/74 (75.68%), Postives = 63/74 (85.14%), Query Frame = 0 

Query: 304 IAISEGTTIDGVHCTPDSVELLPRQPDISRPRLRIVVHEGRNHEVRELVKAAGLEIYSLK 363
           +AISEGT ++G+HC PD VEL+P+Q DI R  LRIVVHEGRNHEVRELVK  GLE+ SLK
Sbjct: 1   MAISEGTMVEGIHCVPDLVELMPKQHDIPRAWLRIVVHEGRNHEVRELVKNVGLEVDSLK 60

Query: 364 RVRIGGYRLPSDLG 378
           RVRIGG RLPSDLG
Sbjct: 61  RVRIGGVRLPSDLG 74

The following BLAST results are available for this feature:
BLAST of IVF0015738 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8L9601.4e-14365.17Putative ribosomal large subunit pseudouridine synthase SVR1, chloroplastic OS=A... [more]
O674441.6e-3336.86Uncharacterized RNA pseudouridine synthase aq_1464 OS=Aquifex aeolicus (strain V... [more]
P351594.7e-3034.01Ribosomal large subunit pseudouridine synthase B OS=Bacillus subtilis (strain 16... [more]
Q9HZ552.0e-2835.22Ribosomal large subunit pseudouridine synthase B OS=Pseudomonas aeruginosa (stra... [more]
O668292.0e-2832.39Uncharacterized RNA pseudouridine synthase aq_554 OS=Aquifex aeolicus (strain VF... [more]
BLAST of IVF0015738 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3C3I99.3e-223100.00uncharacterized RNA pseudouridine synthase aq_1464 isoform X1 OS=Cucumis melo OX... [more]
A0A1S4E1663.7e-211100.00ribosomal large subunit pseudouridine synthase B isoform X2 OS=Cucumis melo OX=3... [more]
A0A6J1BVE62.9e-20090.98putative ribosomal large subunit pseudouridine synthase SVR1, chloroplastic OS=M... [more]
A0A6J1GVH48.8e-19789.70putative ribosomal large subunit pseudouridine synthase SVR1, chloroplastic OS=C... [more]
A0A6J1JT413.3e-19689.45putative ribosomal large subunit pseudouridine synthase SVR1, chloroplastic OS=C... [more]
BLAST of IVF0015738 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008456519.11.77e-284100.00PREDICTED: uncharacterized RNA pseudouridine synthase aq_1464 isoform X1 [Cucumi... [more]
XP_004140075.12.00e-27095.73putative ribosomal large subunit pseudouridine synthase SVR1, chloroplastic [Cuc... [more]
XP_016901969.11.06e-269100.00PREDICTED: ribosomal large subunit pseudouridine synthase B isoform X2 [Cucumis ... [more]
XP_038884576.14.51e-26794.72putative ribosomal large subunit pseudouridine synthase SVR1, chloroplastic [Ben... [more]
XP_022133495.17.24e-25590.98putative ribosomal large subunit pseudouridine synthase SVR1, chloroplastic [Mom... [more]
BLAST of IVF0015738 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G39140.11.0e-14465.17pseudouridine synthase family protein [more]
AT3G43340.14.2e-2675.68Pseudouridine synthase family protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002942RNA-binding S4 domainSMARTSM00363s4_6coord: 146..205
e-value: 8.3E-14
score: 61.9
IPR002942RNA-binding S4 domainPFAMPF01479S4coord: 146..188
e-value: 5.9E-11
score: 41.9
IPR002942RNA-binding S4 domainCDDcd00165S4coord: 146..213
e-value: 2.52643E-10
score: 54.1778
IPR036986RNA-binding S4 domain superfamilyGENE3D3.10.290.10coord: 142..202
e-value: 4.6E-18
score: 66.2
IPR042092Pseudouridine synthase, RsuA/RluB/E/F, catalytic domainGENE3D3.30.70.1560coord: 286..371
e-value: 2.0E-46
score: 159.6
IPR006145Pseudouridine synthase, RsuA/RluA-likePFAMPF00849PseudoU_synth_2coord: 209..350
e-value: 6.7E-16
score: 58.8
IPR020094Pseudouridine synthase TruA/RsuA/RluB/E/F, N-terminalGENE3D3.30.70.580coord: 209..388
e-value: 2.0E-46
score: 159.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 102..130
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 101..130
NoneNo IPR availablePANTHERPTHR47683PSEUDOURIDINE SYNTHASE FAMILY PROTEIN-RELATEDcoord: 35..395
NoneNo IPR availablePROSITEPS50889S4coord: 146..215
score: 14.281917
NoneNo IPR availableSUPERFAMILY55174Alpha-L RNA-binding motifcoord: 112..228
IPR018496Pseudouridine synthase, RsuA/RluB/E/F, conserved sitePROSITEPS01149PSI_RSUcoord: 257..271
IPR020103Pseudouridine synthase, catalytic domain superfamilySUPERFAMILY55120Pseudouridine synthasecoord: 208..388

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0015738.3IVF0015738.3mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000488 maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)
biological_process GO:0000489 maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)
biological_process GO:0032544 plastid translation
biological_process GO:0001522 pseudouridine synthesis
biological_process GO:0009451 RNA modification
cellular_component GO:0009507 chloroplast
molecular_function GO:0009982 pseudouridine synthase activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0016866 intramolecular transferase activity