IVF0015734 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTGCAGTGGAATATTTTTCCATTTGGTCTTCTCCTTCCTCCTCCGAACGATCCAAGAAAAAGAGATATCAACAAAGAGATTCTCATCGCGATCTTCTCGCTGTAATCAAATTCTCATTTTGGAGGGTTTTTCTTCCGAATTCCGGCGTCGTTTCTCGTCTTTCTGAGTTAATCGACGTCGAATACCTCCTTTTTTTTTTGGCAGTGAAGGAATAGGGAGAAGAACAGAAAGATGAAGAGGGTTTTTGGTGTCAAGAAAGACAAAGAACCGCCTCCTTCTATTCAAGATGCCTCCGATAGGGTATAACCGTTATAATTTTTGCCATCTTGGGTTTTGGTTTTGGTTTTGATTTTGATTTTAATCGATTTGTTTCAATTGGGGTTGAGCGTGTTCTGTTTTTCAGATTAATAAAAGGGGTGAATCAGTTGATGATAAGATAAAGAAGCTTGATGTTGAACTCAGTAGATATAAGGAGCAGATCAAGAAAACGAGGCCAGGTCCAGCTCAAGAAGCTGTTAAAGCTCGAGCGATGAGAGTTCTAAAGCAAAAACGAATGTATGTCCCAACCTTCATATTCTTTCAGTTAAAAAGTAGTTTGGCTTGGAGATCTACCATAAGCCTGTATGTCAACATTGTTCCTGTTTTAAGGCATATATATATATATACTTAAACATGTTTCCTTGGGACTTGTTTTCTGTCTAACCTTGGCCTATAATATATGACTATGAACTTCTGTTTTTCCCTGTGCTTTTATTGTACTTCTTTAACCTTTTCGTAGTTAACTGTTAGGTTCCCGGGAATCCCATGTCTTCTTTTTCCAGAATTCCTTAAACTTTGGTTCACTTGACCATAACTTAACGAATCTTGTTTATGGAATAAAGCTTGTAGATTTAATTGCTTGCTGTCGAACTGAACAGGAAAGTCGTCTGACTAAAATTGGATTGGGATTATTTTGTTCTAAACTTAAAATTGTTCACCATGCTATGTATGATTACTTTCTCTTGTTTACTATCAGAATGGTTATTAAGATATTTCTTTTGCTTTTGAACAGGTATGAAGGACAACGTGACATGCTTTACAATCAGACATTTAACTTAGATCAAGTTGCATTTGCCTCGGAGGGCATTAAAGATGCTCAACAAACGGTAACATCTGTTGAATATATTTGTGATCATTAGTCTTCTCATTTTTCAGCCATAAAAAAAAATTGATGATAAAATTTGAGTCTTCCATGGCAGATTTGGACTTAAAGATCTAATGTTAGACAAAGGAAATCATAGGTTTGGATAGGGGAAATGACTGGCTTACTTGCATACTTAATAATTGTTCGACTAGATATCGCGCGTTTAAGTTTGTGTTTATTACGTGAGTCAGATGACCAAGAAATCTGGGTTGCGGTAATTCCTATTAATGCATCAGTTAATTCTTGCCAAAAATTTCTTTTCTTGGTACAAGTACAGAGTTCAGGGCAGTTCAGGTGGAGCTTTGTCTGTCTAATTGGAACCTGCTGCCTACCTCGTGAGAGAACGAGGTAGGGGACAAACATCTGTCATTAGGAAGGCATTTCTTGAAGTTCAATAAAATTCTATCTAGATTCTATCTTATGGTTCTTCCTAATATCAGCTCAGCTCGGATTGTGGATTGATATCCTGGTTTTATTTATTTATTTAATCAAATAGGAGTCACTTTTATCTGTCAAACTAACGTTGGTTTTGTATTTTCCAGATGTCGGCCTTGAAATCCGCCAATAAGGAGTTGAAAGGAATGATGAAAACAGTCAGGATACAAGACATAGATGTCAGTAGCAATCAATTCTTTTTAGCATCCCTAGTTTTATTTTGGCATTTGTTGAGAGATTTGTGTTGCCTGCAGAACTTACAAGATGAGATGATGGATCTGATGGATGTGAGCAATGAAATTCAAGAGACTCTTGGTAGGAGCTACAATGTACCTGATGACATTGATGAGGACGAACTTTTGGGTGGTAAGATTACTGCATTTTAGCTCAGTGTCGATGAAATATATGGTACCCTAGTAATCTTACACTGTGCCTACGTTTTGGATTATTATAGAGCTTGATGCCTTGGAAGCAGACATGGGATTTGAAACTGAAGCTGATGGGGTTCCATCTTATCTCCAGCCTGACAAGGAATCTGATTTTGAAGGAGAGCTCAACTTGCCTGCCGCCCCGATAGGGCATGCAGCAGTTCCTGCTGGCAGAAACAATGCACAGGTAATGATCGTTGAAAAACATGATCCAATTTCTGAGTCAATAATCATGAACTTATTCGTTTTAGAAACGATTGTGAAATGAATATTACTTAAATATTACAGGATGCATGCTAATGCCAACACCCTTTTTTCTCTTTCTTGAGAAAATCCCTGTATAGTTCAACATGAATTGCATATGCATCCATTAACATGAAGTTACACATCTGTGAAGTTACACATCTGTCGTATGTTCAAGAGAATGTCAGGATCCATCGGTTCTAAATTACATATTGTCATTGATATGGTTTAATTTTACCTTCGCACCTTCGGCTCTTTTACATGCATTGAGTTCTTTTTTTTCCGCTTAATTTGATGGGCAGGCCGAGGATGAATTAGGTTTACCCGCTGTTCCTCGCGCATCCCTTCGAGGCTAAAAGTTGCATTTGTCTCATCTGGACCATCTCTTACCGGGAGGCCAAAAATTGGAGTGAATCTTTGTATACATATTGTGCAGAGCTTATATTGATTCATATATAAATGGATGATCAATTCATCGTTTGATTATTTACTCCATGTATTTGATAACAACCTGCATTTGGAATTGTTCCTCCAGGCAGTCTGAAGTCTTTGGCTCAAACTATATATATATAGGCACATTCTTGGTATCATTTTTTTGCGTTGACATTTCATGTAGTTTATAGTTTATATTGCCAGATGAAACTATATAATGTGTAGCCACATTATTCGTGTTCGTTTATTTCATTTATGGTCAACTTCAAAGAACAATTGTTCTAATTTAACATGCCAACCGCTTGGATTGATGAATAATAGTAAAAGACTA GTGCAGTGGAATATTTTTCCATTTGGTCTTCTCCTTCCTCCTCCGAACGATCCAAGAAAAAGAGATATCAACAAAGAGATTCTCATCGCGATCTTCTCGCTGTAATCAAATTCTCATTTTGGAGGGTTTTTCTTCCGAATTCCGGCGTCGTTTCTCGTCTTTCTGAGTTAATCGACGTCGAATACCTCCTTTTTTTTTTGGCAGTGAAGGAATAGGGAGAAGAACAGAAAGATGAAGAGGGTTTTTGGTGTCAAGAAAGACAAAGAACCGCCTCCTTCTATTCAAGATGCCTCCGATAGGATTAATAAAAGGGGTGAATCAGTTGATGATAAGATAAAGAAGCTTGATGTTGAACTCAGTAGATATAAGGAGCAGATCAAGAAAACGAGGCCAGGTCCAGCTCAAGAAGCTGTTAAAGCTCGAGCGATGAGAGTTCTAAAGCAAAAACGAATGTATGAAGGACAACGTGACATGCTTTACAATCAGACATTTAACTTAGATCAAGTTGCATTTGCCTCGGAGGGCATTAAAGATGCTCAACAAACGATGTCGGCCTTGAAATCCGCCAATAAGGAGTTGAAAGGAATGATGAAAACAGTCAGGATACAAGACATAGATAACTTACAAGATGAGATGATGGATCTGATGGATGTGAGCAATGAAATTCAAGAGACTCTTGGTAGGAGCTACAATGTACCTGATGACATTGATGAGGACGAACTTTTGGGTGAGCTTGATGCCTTGGAAGCAGACATGGGATTTGAAACTGAAGCTGATGGGGTTCCATCTTATCTCCAGCCTGACAAGGAATCTGATTTTGAAGGAGAGCTCAACTTGCCTGCCGCCCCGATAGGGCATGCAGCAGTTCCTGCTGGCAGAAACAATGCACAGGCCGAGGATGAATTAGGTTTACCCGCTGTTCCTCGCGCATCCCTTCGAGGCTAAAAGTTGCATTTGTCTCATCTGGACCATCTCTTACCGGGAGGCCAAAAATTGGAGTGAATCTTTGTATACATATTGTGCAGAGCTTATATTGATTCATATATAAATGGATGATCAATTCATCGTTTGATTATTTACTCCATGTATTTGATAACAACCTGCATTTGGAATTGTTCCTCCAGGCAGTCTGAAGTCTTTGGCTCAAACTATATATATATAGGCACATTCTTGGTATCATTTTTTTGCGTTGACATTTCATGTAGTTTATAGTTTATATTGCCAGATGAAACTATATAATGTGTAGCCACATTATTCGTGTTCGTTTATTTCATTTATGGTCAACTTCAAAGAACAATTGTTCTAATTTAACATGCCAACCGCTTGGATTGATGAATAATAGTAAAAGACTA ATGAAGAGGGTTTTTGGTGTCAAGAAAGACAAAGAACCGCCTCCTTCTATTCAAGATGCCTCCGATAGGATTAATAAAAGGGGTGAATCAGTTGATGATAAGATAAAGAAGCTTGATGTTGAACTCAGTAGATATAAGGAGCAGATCAAGAAAACGAGGCCAGGTCCAGCTCAAGAAGCTGTTAAAGCTCGAGCGATGAGAGTTCTAAAGCAAAAACGAATGTATGAAGGACAACGTGACATGCTTTACAATCAGACATTTAACTTAGATCAAGTTGCATTTGCCTCGGAGGGCATTAAAGATGCTCAACAAACGATGTCGGCCTTGAAATCCGCCAATAAGGAGTTGAAAGGAATGATGAAAACAGTCAGGATACAAGACATAGATAACTTACAAGATGAGATGATGGATCTGATGGATGTGAGCAATGAAATTCAAGAGACTCTTGGTAGGAGCTACAATGTACCTGATGACATTGATGAGGACGAACTTTTGGGTGAGCTTGATGCCTTGGAAGCAGACATGGGATTTGAAACTGAAGCTGATGGGGTTCCATCTTATCTCCAGCCTGACAAGGAATCTGATTTTGAAGGAGAGCTCAACTTGCCTGCCGCCCCGATAGGGCATGCAGCAGTTCCTGCTGGCAGAAACAATGCACAGGCCGAGGATGAATTAGGTTTACCCGCTGTTCCTCGCGCATCCCTTCGAGGCTAA MKRVFGVKKDKEPPPSIQDASDRINKRGESVDDKIKKLDVELSRYKEQIKKTRPGPAQEAVKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMMKTVRIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETEADGVPSYLQPDKESDFEGELNLPAAPIGHAAVPAGRNNAQAEDELGLPAVPRASLRG Homology
BLAST of IVF0015734 vs. ExPASy Swiss-Prot
Match: Q9LPN5 (Vacuolar protein sorting-associated protein 60.1 OS=Arabidopsis thaliana OX=3702 GN=VPS60-1 PE=1 SV=1) HSP 1 Score: 389.4 bits (999), Expect = 2.9e-107 Identity = 200/237 (84.39%), Postives = 222/237 (93.67%), Query Frame = 0
BLAST of IVF0015734 vs. ExPASy Swiss-Prot
Match: Q9FMC5 (Vacuolar protein sorting-associated protein 60.2 OS=Arabidopsis thaliana OX=3702 GN=VPS60-2 PE=2 SV=1) HSP 1 Score: 384.4 bits (986), Expect = 9.2e-106 Identity = 197/237 (83.12%), Postives = 219/237 (92.41%), Query Frame = 0
BLAST of IVF0015734 vs. ExPASy Swiss-Prot
Match: Q9D7S9 (Charged multivesicular body protein 5 OS=Mus musculus OX=10090 GN=Chmp5 PE=1 SV=1) HSP 1 Score: 176.8 bits (447), Expect = 2.9e-43 Identity = 109/233 (46.78%), Postives = 143/233 (61.37%), Query Frame = 0
BLAST of IVF0015734 vs. ExPASy Swiss-Prot
Match: Q4QQV8 (Charged multivesicular body protein 5 OS=Rattus norvegicus OX=10116 GN=Chmp5 PE=2 SV=1) HSP 1 Score: 176.8 bits (447), Expect = 2.9e-43 Identity = 109/233 (46.78%), Postives = 143/233 (61.37%), Query Frame = 0
BLAST of IVF0015734 vs. ExPASy Swiss-Prot
Match: Q7T339 (Charged multivesicular body protein 5 OS=Danio rerio OX=7955 GN=chmp5 PE=2 SV=1) HSP 1 Score: 176.0 bits (445), Expect = 5.0e-43 Identity = 106/231 (45.89%), Postives = 143/231 (61.90%), Query Frame = 0
BLAST of IVF0015734 vs. ExPASy TrEMBL
Match: A0A5D3CBJ0 (Charged multivesicular body protein 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G001830 PE=4 SV=1) HSP 1 Score: 452.2 bits (1162), Expect = 1.3e-123 Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 0
BLAST of IVF0015734 vs. ExPASy TrEMBL
Match: A0A1S3BFT5 (charged multivesicular body protein 5 OS=Cucumis melo OX=3656 GN=LOC103489370 PE=4 SV=1) HSP 1 Score: 452.2 bits (1162), Expect = 1.3e-123 Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 0
BLAST of IVF0015734 vs. ExPASy TrEMBL
Match: A0A0A0KWL4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G613490 PE=4 SV=1) HSP 1 Score: 450.3 bits (1157), Expect = 5.0e-123 Identity = 236/237 (99.58%), Postives = 236/237 (99.58%), Query Frame = 0
BLAST of IVF0015734 vs. ExPASy TrEMBL
Match: A0A5A7SZW9 (Charged multivesicular body protein 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G006570 PE=4 SV=1) HSP 1 Score: 438.3 bits (1126), Expect = 2.0e-119 Identity = 237/262 (90.46%), Postives = 237/262 (90.46%), Query Frame = 0
BLAST of IVF0015734 vs. ExPASy TrEMBL
Match: A0A6J1JDD4 (vacuolar protein sorting-associated protein 60.2 OS=Cucurbita maxima OX=3661 GN=LOC111483361 PE=4 SV=1) HSP 1 Score: 436.0 bits (1120), Expect = 9.8e-119 Identity = 227/237 (95.78%), Postives = 232/237 (97.89%), Query Frame = 0
BLAST of IVF0015734 vs. NCBI nr
Match: XP_008446740.1 (PREDICTED: charged multivesicular body protein 5 [Cucumis melo] >TYK09191.1 charged multivesicular body protein 5 [Cucumis melo var. makuwa]) HSP 1 Score: 450 bits (1158), Expect = 3.34e-159 Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 0
BLAST of IVF0015734 vs. NCBI nr
Match: XP_004135046.1 (vacuolar protein sorting-associated protein 60.1 [Cucumis sativus] >XP_031741404.1 vacuolar protein sorting-associated protein 60.1 [Cucumis sativus]) HSP 1 Score: 448 bits (1153), Expect = 1.93e-158 Identity = 236/237 (99.58%), Postives = 236/237 (99.58%), Query Frame = 0
BLAST of IVF0015734 vs. NCBI nr
Match: XP_038891460.1 (vacuolar protein sorting-associated protein 60.1 [Benincasa hispida]) HSP 1 Score: 443 bits (1139), Expect = 2.63e-156 Identity = 233/237 (98.31%), Postives = 234/237 (98.73%), Query Frame = 0
BLAST of IVF0015734 vs. NCBI nr
Match: KAA0034639.1 (charged multivesicular body protein 5 [Cucumis melo var. makuwa]) HSP 1 Score: 436 bits (1122), Expect = 2.53e-153 Identity = 237/262 (90.46%), Postives = 237/262 (90.46%), Query Frame = 0
BLAST of IVF0015734 vs. NCBI nr
Match: XP_023541762.1 (vacuolar protein sorting-associated protein 60.1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 434 bits (1117), Expect = 5.93e-153 Identity = 228/237 (96.20%), Postives = 233/237 (98.31%), Query Frame = 0
BLAST of IVF0015734 vs. TAIR 10
Match: AT3G10640.1 (SNF7 family protein ) HSP 1 Score: 389.4 bits (999), Expect = 2.0e-108 Identity = 200/237 (84.39%), Postives = 222/237 (93.67%), Query Frame = 0
BLAST of IVF0015734 vs. TAIR 10
Match: AT5G04850.1 (SNF7 family protein ) HSP 1 Score: 384.4 bits (986), Expect = 6.5e-107 Identity = 197/237 (83.12%), Postives = 219/237 (92.41%), Query Frame = 0
BLAST of IVF0015734 vs. TAIR 10
Match: AT5G04850.2 (SNF7 family protein ) HSP 1 Score: 365.9 bits (938), Expect = 2.4e-101 Identity = 197/274 (71.90%), Postives = 219/274 (79.93%), Query Frame = 0
BLAST of IVF0015734 vs. TAIR 10
Match: AT3G10640.2 (SNF7 family protein ) HSP 1 Score: 282.0 bits (720), Expect = 4.6e-76 Identity = 144/172 (83.72%), Postives = 160/172 (93.02%), Query Frame = 0
BLAST of IVF0015734 vs. TAIR 10
Match: AT4G29160.1 (SNF7 family protein ) HSP 1 Score: 77.0 bits (188), Expect = 2.2e-14 Identity = 71/224 (31.70%), Postives = 104/224 (46.43%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|