IVF0015669 (gene) Melon (IVF77) v1

Overview
NameIVF0015669
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Locationchr05: 19396346 .. 19396645 (+)
RNA-Seq ExpressionIVF0015669
SyntenyIVF0015669
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGCACAGGGCGACTCGACCAGGCGCGCACGACTCGAGAAAACGCGTACGACTCGCGTGCGTGCTCGGCTGGGGCAGCTCGGCTCTTCGCGCGACTTGCAGGAATGCGCGTGCGACTGGCCGCTGGCGAGTCGACGTCATGCGGCTATGGAGGCACGCAGACTTTTCGAGGCACGGAATGGCTGGAGGCGGATTGGCTCGTGGAGAATGGTGCGGGTGTGCGGGTCGGTTTTCTGAGTTTGGGTATGGGCGACGGACTGAGCGCTCGGTCTTCTGACGACGCGGTGCTGACCAGGTAG

mRNA sequence

ATGCGCACAGGGCGACTCGACCAGGCGCGCACGACTCGAGAAAACGCGTACGACTCGCGTGCGTGCTCGGCTGGGGCAGCTCGGCTCTTCGCGCGACTTGCAGGAATGCGCGTGCGACTGGCCGCTGGCGAGTCGACGTCATGCGGCTATGGAGGCACGCAGACTTTTCGAGGCACGGAATGGCTGGAGGCGGATTGGCTCGTGGAGAATGGTGCGGGTGTGCGGGTCGGTTTTCTGAGTTTGGGTATGGGCGACGGACTGAGCGCTCGGTCTTCTGACGACGCGGTGCTGACCAGGTAG

Coding sequence (CDS)

ATGCGCACAGGGCGACTCGACCAGGCGCGCACGACTCGAGAAAACGCGTACGACTCGCGTGCGTGCTCGGCTGGGGCAGCTCGGCTCTTCGCGCGACTTGCAGGAATGCGCGTGCGACTGGCCGCTGGCGAGTCGACGTCATGCGGCTATGGAGGCACGCAGACTTTTCGAGGCACGGAATGGCTGGAGGCGGATTGGCTCGTGGAGAATGGTGCGGGTGTGCGGGTCGGTTTTCTGAGTTTGGGTATGGGCGACGGACTGAGCGCTCGGTCTTCTGACGACGCGGTGCTGACCAGGTAG

Protein sequence

MRTGRLDQARTTRENAYDSRACSAGAARLFARLAGMRVRLAAGESTSCGYGGTQTFRGTEWLEADWLVENGAGVRVGFLSLGMGDGLSARSSDDAVLTR
Homology
[Close]
BLAST of IVF0015669 vs. NCBI nr
Match: KAA0032400.1 (hypothetical protein E6C27_scaffold219G002780 [Cucumis melo var. makuwa] >TYJ96350.1 hypothetical protein E5676_scaffold1159G00080 [Cucumis melo var. makuwa])

HSP 1 Score: 49.3 bits (116), Expect = 2.49e-04
Identity = 34/67 (50.75%), Postives = 40/67 (59.70%), Query Frame = 0 

Query: 8   QARTTRENAYDSRACSAGAARL-FARLAGMRVRLAAGESTSCGYGGTQTFRGTEWLEADW 67
           Q  T R N +DS A S G + +    LAGMRVRLAAG STS GYGG +  RG + LEA  
Sbjct: 54  QTHTARGNVHDSHASSTGGSSVPRVPLAGMRVRLAAGGSTSRGYGGVRMARGAKRLEAGV 113

Query: 68  LVENGAG 73
              +G G
Sbjct: 114 AQVSGFG 120

The following BLAST results are available for this feature:
BLAST of IVF0015669 vs.
Match NameE-valueIdentityDescription
BLAST of IVF0015669 vs.
Match NameE-valueIdentityDescription
BLAST of IVF0015669 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0032400.12.49e-0450.75hypothetical protein E6C27_scaffold219G002780 [Cucumis melo var. makuwa] >TYJ963... [more]
BLAST of IVF0015669 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0015669.1IVF0015669.1mRNA