IVF0015622 (gene) Melon (IVF77) v1

Overview


Name	IVF0015622
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	E3 ubiquitin-protein ligase RNF4-like
Location	chr04: 19642179 .. 19655104 (+)
RNA-Seq Expression	IVF0015622
Synteny	IVF0015622

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCACCAACTGAGAACCGAGATCAAGGAGAAACATCTCAACTGCGGCTTCAGGATGCACAGGTTAATCAACAACAGCCTGTACAGCCTGCAATGATCGACATTGAGGCCATTGATGACGATGTCATTGAATCATCCGCCAGAGCTTTTGCTGAAGTATGTTTCCTGTAGCTTCTCTTGAATGTTTAAATACTCACGGTTGTTCTATCCTTATTATATTCTTTTTCTATTGATTCTGATCTTTATTTCATGAATTCCATTGTTTATCTGTTAGGCTAAAAATAAATCCAGACGAAATGCTAGGAAGAATGTAGTTGACGTGGATGCAGGTATGTTTATTCCAGCTGGTGGAGCACTATAGCTAAGCAGATTTTTTTCATTACTTAGAAATTGGTAGCATGTTGGTCTATCAATTTTATTGTCATATCACTTTCAAATTTGCAATGCAATTTTTTAATTTTATTCTATATAAGCTTTTTTTAATAAATTCTAAAGGTATGCAGTTTTCTGCTTGTTCATTATGAAAGGAAGCTTGGAAATTTGTTATATAAGAAAATTGAACTTTGTTATCAATTCGGAAAGTAGTTCGTTAGGATTGGTGGTCACAGAAGTAGCATTTGAAACAGCCTTTAGATTTGGTGATTCCTGTTTTCAAACATACCCACATTATGACGATCTTAATTTTAGGATGATTAAGAAGTTTGACATCTTGAAGCATTAATAGCTTAGAAATTGTGAAGGTACAGAAGGTGTAGTTGTATTCCATCATTGAGATGTCTTCTAAATCTTAGCATCCATTAGTAGTTAGACCCATTCTAGCACTGATTTTTTGAAGACCATGTACTCCTGTCTAGAGCATAGTAAGAGAAATTAATAGAAGAAAGATTTCCAGTCAATCCGTACATCCTTCCCAAAATACATCATTATACCAAATTTCCAATGACCATCTAGGTTGGAGTCAGTGTTTTGAAAGGCGCGCTGAGGCGCGCGCCTAGGCGCGCCTAGGCGCAAGGCACACCCCCAGCGCTTCTCTGTGGGTAGGCGAGGCGCCGATGGAAAGGCGCGGCTGAGGCGCGCGCCTTCCTCAAGGCGCCGTAGGCGCAAAAAGCCCACAGGCGCGGGCTTTATAACGTGGGCTGGGCTTAATTAAAAAAAACAAATATTTACCTATTTTAAACCTATTTAACTTTTACTTAATATATTCACCTAATATATTTACCTAGTACGTGTAACGTGACTGTGAAGAAACGAAACGACGGCTCGGCTCGACTTGAAGATGAAGACAACGAAACGATCGACTGCTGCTTTGTTTTCTTCTTCTTCTTAAAGATCGACTGCCATTAAAAATCTTAATAAAAAAAATCCTAAGGTGTGCTGCTCTGTTTTCTTCTTCTTCTTTCTCTTTTTCTTCTTTTTCTTTTTCCTTTGGTGCTGACTGCTGTCATTAAAAAAAATCCATTCTTCTTCTTCTTCTTTTTCTTTTTCCTTTGGTGCTGACTGCTGCCATTAAAAAAAATCCATTCTTCTTCTTCTTCTTTTCTTTTTCCTTTGGTTCTTTTCCTTTGGTGCTGACTGCTGCCATTAAAAAAATCCATTCTTCTTTTTCTTTTTCTTTTTCCTTTGGTTCTTTTCCTTTGGTGCTGACTGCTGCCATTAAAAAAAATCCATTCTTCTTCTTCTTCTTTTTCTTTTTCCTTTGGTGCTGACTGCTGCCATTACTGTTGTGCTGCCAGCCTCCCATTACTCTTGTTTTTTGCCATCCAATCTTCTTCTTTGGTGCTTCTTTTGCTGCCATTAGATTACTATTAAAAAACATGGCTGATGAAAGTTCTAAAAAAGATCCGGCATGGAAATATGGTCGATTGCAAAATGAACAAGATATAAATACGTTTGTCTGTGGATTTTGTTCGAAAGTAACAAAAGGAGGGGTGTATCGATTGAAACAACACCTCGTTGGTGGTTATAGAAATGCCATAGCTTGTAAAAAATGTCCGGATCATGTAAAGGAAGAAATTAGAGATTACATGTCCAAGAAAAAGGAGATCAAAGAACAAAGAAATTTGATTGTGGACATTGATGTACAAGATTACGGTATGGAGGATGAAGATGAAGGGAGTATTAGTGTAAATAACAGAGCAACATCAAGTGGCTCGAGCTTGAAGAAGCCAAGACAAAAGGGTCCAATGGATGCATTTTTTACTCCCAATCCAGAAAGTGTGGTTCAAAATAGAAAGAACGACAAAGGAAAACAAACTTCGTTGAATGCGGCGTACAAGAAGGAAATGAGGGAGCACACCATCCAAAGAATTGCTCGATGGTTTTATGATGCAGGAGTGCCTTTGAATGCTTGCACATATGATAGTTTTGCCCCTATGATTGAGTCAATTGGGCAATTTGGTCCTGGATTGAAACCACCAACATATCATGAGTTGAGAGTCCCATGTTTGAAGAAGGAATTAGAAGCAACAAATGAGTTGATGAGCAGCCATAAAGCAGAGTGGGCTATGGTTGGATGCACTGTTATGGCTGATGGGTGGACCGATAGAAGAAATAGGACATTGATTAACTTTTTAGTTAATAGTCCTAAGGGCACCATGTTTATTGAGTCCATCGATGCTTCATCTTATGTGAAGGATGGAAAGAAGATGTTCGAGCTACTTGACAATTTTGTAGAGCGCATTGGAGAAGCAAATGTTGTACAAGTAGTTACTGATAGTGCCTCAGCAAATGTGATGGCAGGTAAGAATGTAAACTATTATGCTATTAGGGAGATTGTTTGATTTAGTGAGTTCTATGCTAAATGTATACTTATTTTCTTTGTTAATAGGGAGATTGTTAGAAGCAAAGCGACCACAATTGATATGGTCTCCATGTGCTGCTCATTGCTTAGATTTAATGTTGGAGGATATATACAAGATCTCCAATATTCGCAAAGCATTGAAAAGAGGCATGGAGATTAGCAACTTCATCTATGTTCGTCCTGGATTATTAAACATGATGCGACGATTTACTAACCAAAAGGAGTTAGTTAGACCAGCTAATACTCGCTTTGCTACTGCTTGCATTACATTATCGAGTATACATCATCAAAAGAACAACTTAAGGAAGATGTTTACTTCAGATGAATGGAAGGATAGCAAATGGAGCAAGGAGCAACAAGGAAGGCGAGTAGTTCAAACTATTTTGTTGGCTAGTTTTTGGACTACAATTGTGTTTGCTCTTAAAGTGTCTGGCCCACTAGTTCGAGTTCTTAGATTGGTTGATGGCGAAAAGAAGCCACCTATGGGATATATTTATGAGGCCATGGATAGAGCTAAAGAAGCTATTGCTAAGTCGTTCAATAATAATGAAGAAAAATACAAGGACATTTTCACCATAATTGATAGAAGATGGGAGCTTCAGTTGCATCGTCCTCTGCATGCAGCGGGGTATTATTTAAACCCGTCATTCTATTATTCGAATCCTAGCATCCAAGAGGATGATGAAATAGTTAATGGGCTCTACTCATGCATAACAAAAATGGTTGCTTCATTAGACATCCAAGACAAAATACTTGCAGAACTAAGCAAGTATAAGAGAGCTGAAGCATTGTTTGGACAACCTTTAGCAATCAGACAAAGGGACAAAATATCTCCAGGTAAATTTCAACTAACCGATTAGTCGATTACTCAACAATAATTATTTTATTAATATATATTTTTTGCCTATAGTGGAATGGTGGGATAATTTTGGACAATCAACTCCAAACTTGCAAAAGTTTGCTATTCGCATTTTAGGTCTTACTTGTAGTGCTTCTGGATGCGAACGTAATTGGAGTGTGTTTGAGTAGGTTAGCTTTCCTCTTCTTTACATGCGAATGTAATTTTGTTGATTCACTGGCAGTGACAATGACTTTTCTAATTTTGTAGCTTCATAGCAAGAAACGAAATAGGCTTGCTCAAAGTCGTTTGAATGATTTAGTGTTCATCAAATACAATAGAGCATTAAAACGTCGATACAACCTTCGAGATATCGTCGATCCCATCTCTTTAAGAGATATTGATGATAGTAACGAATGGTTGATTGGAAGATTGGATGATGATTCTGAGGAGGAGGATGAGCTGGTATTTGACGATGATATTTTAACGTGGGGTGATGTTTCAAGAGCTGCCGGAGCAAAAGAACCAACCTTCTATTCTAGAGCTAGGGCCTCAGGAGCGACTAATGTTTCATGTTCATACTCGTCTACCACACAACCCACACCCAAACAAATAAATTTGGATGACTCTGATCAGGAAGAAGAAGATACCGATGGCTATAAGTCCAACGAAGGAGTGAATGAAGATGAGGATCAATTTAGTGATGATGAGTTTGATCTTTAGGAATGAACTTCTATTGTGTTTTGTTTTTTGGGTAGAAAACTTATATTATAATATTTTATACATTAGAGTTAAATCTCATTTCTATATTGGTTATTTACTTATATTTTATACATTGTTGTTCCTTTCAATTTTGTATGTATATATATATATATATATATATTTTTTTTTTTATATAGTGCGCCTCATGAAAAAAAGCTCGCGCCTTTTTGTGCGCCTTGCGCCTAGGCCCCAGAGGACCATTGCGCCTTAGTGCGCCTTGAGCCTTAAAAACACTGGTTGGAGTTAATGATCATAGTAGTTCTTAGCTTGGATATCTGTAACCCCGGTTTGTAGTTGCTTGTCTACAGTCTGCTATTAGCAAGCCTCCATAATTCTGCCATTACATACTCTTTTGCTGTGACATGAGTGTATTCCACATTAGCATCACTTAGAATGGGTACCTCTTAGCCATTTGGTTGAAAAATTGTTGTTGAGTTTAGTCAGCTTCTCTATTAAATCTTTGGACTTCATCTTTGCATGACTGAACATTGAACTATCCATTTTTTTAATAAGAAACTGATAGACCCCCTATCATCCAGCAATACAGCGGAAGAGGAAGATAGCCAAGAAATAGATAAGTCTGTTAAAAAATCTGTTAGAGAAGTCCGTTATAAAGTTAGTTAGATGAGTAGCTTAAATAGCACCTTAGTCTGAAGGAATAGGCAGTGAAGTTTTGAGAAGAGTATTCCTTTATTCTTGAAAGATAGAATAACAAGGAGAGAGAAATCTACTTTCTGTGTAAGATTTCTATTATCAACAAAGCATTCATACTTGGAATACAACTGAAAAGTACAAAAATCCTATTCCACCCTTTGGAAGCGAACTTGCAGTGTAAGAATAAATTGTCTAAGGTCCCTATCTCCTTTTGGTAGAGAAGACACATGGAAGGGGAAAGAGACCAATTAGGGAACTTTTTTGGAGCTCATCATGGTTGTTCAAAGCTTCTATAAGCAAGTGACCAAAGGGAAAACTTCATTTTTCTAGGAATTTTCAGTTTCCAATAAGATTGACCAAAGGGAGGTTAATTTTTGGGGCTCCTGTAGCCATCTTAAGGAAAGTGAACTTGGTTGAAAACCGACTAGAAGCCTTCACCACGTCGAACTATCCATGAAATGAATGTGTGATCCGTACTTCCAACATCCACGGAAATAAGGATCTCAAATTCATTCACTCACCTATTCTCATATTCACAAGGTAGAAGACCCTAGTTCAATTTATTGCGCTTAACGGAAGTGGAAAGTGATTGGGGGTGTTATGTTACTTCTAGTATGTCGGTGTATTCTTTCATTTTTTTCAATGGAAGTCTATGTTTTTTCATTAAAAAAATATTATTAGTTATTGAAAAGAAGAAGATAAGATATATGTGGAAAACCCTAGTACAGGGAGAAAAAATCATGATAGAAGCCGCTCTTATTATTTTCTAATAATCAAAAGAGTACAAGAGGGAAGAATATATGTAGGCTCTAATAAGCACTAATAGTAAAGGAAAATACTAGGGTACAATAAATTACACAAATACCCTTGGGCTAATAAACATTCAACTAGTCCCTAATTTCAAACACTCCATAGGCCCAACTTGCTAACACTATAGTCAAAGCTCAGTGTTAGTAATCCTTTGGTGAGGACATTGACAATTTGTTGACTAGAAGGAATGTATAGGATACAAATACTACCATTGTCAAGTTTCTCCTTTATAAAATGTCTGCCTATCTCCACATGTTTCGTTTGTGATGTTGAATTGGGTTATTGCCGATGCTTAAGCAGCTTTGTTGTCACAGAAGAGCTTGGTAGGTAACTCACAATCTTGGTGAAGATCAGATAAAATTTTCTGTCGCTAGATTTCGTCACAGATTCCCAAACTCATAGCTCTGTATTCGGCTTCAACACCAATCCTAGCAACAATACCAGTCCTAGCAACAACACCTTGCTTCTTACTCCATCAAGTAACAAGATTACCCCTTACAAAGGAATAGTATCATGAAGTGGACTTTTTGTCAGTAACTGATCCTACCTAATCAGAGTTGGTATGAGCCTTAATACATTTTTTGTCAGTTTTTCAGAACATCAGACCTTAACCTAGAGTAGTTTTTAGTATCTTGAAATGCGATTCACAGTTTCCATGTTTTCTTCCTAGGGTGCTTGCATGAACTGACTAACAATGCTAACTGCATAGGAGATATTTGGTCTTGTATGAGATAGACAAATCAACTTTCCCACTAAATGGTGATACTTCTCTTTGTCAATAGGAACTTGTCACTAGAATTTCCCAGTTTTGCATTGAATTGAGTCTGCATCCAGCTAGTCATACCTCTTTCCTTTAACAAGTCAAGAGTATACTTCCTTTGTGAAACAGAGTTCCCTTCCCTCGATCGTGCCACCTCCATCCCAAGGAAGTACTTTAGATTCCCTAGGTCTTTGATTTCAAACTCGTCACCCGTTTTTTTTTCAACCTGATAATCTCAACAATATCATCTCCTAACAACACAATATCATCGACATACACGATCGACACAACAATTGTCCCAGATGTGTGATCAGAATGTTCCTGAGAGAAGCCTTGAGATCTAACAAAGGTGGTAACTCTATCAAACCATTCCCTGGGAGATTGTGTCAAGCTATAAAAAGATTTTCGAAGCTTACAAACCTAGTGGTCAAATGAACTCCAAAGCCTGAAGGAGGACTCATGTACACTTCTTCCAAATCACCATTTAGGAAAGCATTTTTTACATGAAGCTGATAGAGAGGCCACTCTTTATTGACTATAACAAACAGAAGAACCTTGATTGTGTTTAACTTGCCACATGAGAAAAAGTCTCTAAATAATTGGGAGTGAACCCTTTCGCAACAAGCCTAGCCTTGTACCTGTTTAAGGTCCCATTTGCTTTGTACTTTAGAGCAAACATCCATTTGCATCCCACTGTCTTGTGCCCTTTAGGAAGAGTGCAAAGATCCCATGCCTTATTCTTCTCAAGTGCTTCCATTTCTTCCATGACAACCATCTTCCACTCAGGACTTCTCATAGCTTCATTTATGTTCTTTGGTATTATTGCAGTGTCGAGACTTGTAGTGAACACCATATTACTATAAGACGTGTGATTACGCATAGAGTGCTTCGTACAAGATCTAGTACCTTTTCTGAAGGCAATGGGCATGTCAAGAAAGGGATCATGGCTCTTTGGCTTGTTTGAGTCATCCGTGCTAGTCTCAAGCACCTACGTGTTTGTTAGAGTTACATCACTTCTGGCAGTCTTATTCTCTTTTGGAACTGTCATATTAGTCTTGTCATCCTTAACCACATTAACAATATCATCCTCAACACACAAGTTATCATGATCATGTTCAGTAGTTCTTGAGCCTGTGTTGGTTCAGATTCATGAACTGGAGCCGGCAGAGCAATAGGGGGCCCCATTTCCTTTCTAAGATTATTACTTTAGTAAGTTATCCGGGGGACTTGGTTGGTGGGTAAAACAATGTCATGGAGGATGGGTTCAGAAGGCTCAGTAGGGGCTATAGGCATGAAAGGAACGGGCCGGTTAGCCTCTTCACTACTACTCTCTCCTTGAAGATGGCTAACAGGAAAGAAGGCGACGTCCATGGACACAGACTACTTTTGAAGAGGAGGATGGTATTAAGGATACCCCACAAAACACATGATTGAACACGAGGAGCAAATTTAGTGTTGTTAGGCCTATGACTGTGAACAAAGGTAGTGTACTCGAACTCACAGAGAGGAACATCAGGAATAAGCCGTGTGGAAGGGTAGAACTCCTTGAGGCATTCAAGAGGTGTTTGGAGGTGGAGGACCTAAGATTTGCATTCTATTCATAAGATGTCGCAATAAGGACTACATCCCCCATAAGTTAGAAGGAAAAGAAGTTGACAACATGAGAGAATGAGCAACCTCAAGGAAGTGAAGGTTTTCCGGTTTAGCCACGTCGTTCTGTTGCGAGGTATAAGCACAAGAACTCCAGTGAACAATCCCTTTAGAGGACAAAGTCTCAATTAGGAACTCACAACCATTATTGGTATGCAAAGTTGCAATTTTAGCGTTGAAATTGTGTCTCAGTGGTTGTGTAAAATGTTGAAATATTGAAGAGACCTCAGATTTATCAGTGGGGAGAAAGACCCAAGTTAGATGAGAATGATCATCAATACAGGTTACAAACCAATGTTTCCCCGAAGCGGTAGTGACCTGTGAAGGCCCTCAAATATCATTATGAAAGAGGGTAGATGGTTGGGTAGGTTTGCAGGGTTGAGACGCAAACGAGACTTTGTGCCGTTTTGCACGATATACACACATCACAAGACAAAAAGGAGATATCTACTTTAGAAAATAAGTTAGGTAATAGTTGTTTCATATATTGAAAGTTTGGGTGGCCACGATGAAAGTGCCACAACATACAATCTTTTTCAGAAGTAGAAAAATAAGAGGACAACAGACTAGTGTCCTACAACAATCCCTAGACAAAGCATCATCATCAAGGAAATAGAGCCCCTTAGTATGCCTGAAAAGAAATAGTATCAGGTGAGAAGACAGCTTGACAGTGTAGATTCCTGGTTATCTTACTGATAGATAGTAAATTGTAAATTATCTTAGGCACATGTAACACATTCTGTTAAATGAGTCCATCAATAGAGGAAATATGACCCGCCCGCAATAGGAGCAAGGACTTGTCTGAAAATCCTAATTCTTTCATTGCCAACACATGGGAGGTATGATATAAAATGTTAAAGAGGGTCCAGTTAAATGGATAGTAGCACCTGAATCAAGTATAAGAGTTTCTTCCCATCAGTGCTGCTAAGACTAAAGGATTGGGATGTACCTAATTGTGGAATGGCTCCAAGAGGAGTACGAAGATTGTCTTGACTTGACTCCCTCCAGGGGTTGGGGGTTGTGAAGTTCCAGTTTGTTTCACCCATAAAAGCCCTACCAAAATTATGCTTGTCATTTGACGGACGTTTCTTACCATTTGGTGGTCAATCATGTAACTTCCAGCAACGGTCTTTCGTATGCTAAGGTTTCTTACAATGCTCACACACCTACATACTTCCTACTTTGAGGTTCCATACTGCTATCTTAATAGATAGAGACCACAAGAAATTATTCCTATGGATTTCCTATGAGCTAGATAAATAATTTGTTGCAGTTAAGGTAGAGAAAGAAGTTCTCCGAATACATCTTTAAGACTAAAGGAGTGGCAGAATTTGTGGAGTTTGTGGTAGCTCCTAGAGCTGCCTCAATGATTTGTTGCTGAAAACTTGTCTAAAGATTAAACAATTTTGTGTAACCATTACTGGAGATAAAACAACAAAACCTTGATGTTCATAACTAGGCGGCGCATGATGAGGAAACGCAGTTGTTGTGAGAAGCTTGTTTCTGCAATAGAGAATTTACCTTTGTGGTAGGCGGATGACACACTAATCTCGTTTTCATGATGTATGTTTGTTAGAGTTTCCATCAAAGGTTGTGACGGTGCTAGAGTTGAATGGATATGCAAGGATGGAAGATAACAATCAACGACAGCTTGGACAGTACTGATAATATCGGAGTGGAAAAAACGGCGGCTTTAGCGAATTCTCCGACGATTGCTCCAGTGGTGGCAGTTTTGATGACTGCTCCGGCGGCAGTAGTTGTGGCTGAGGCAGGGCTGGTGCAAAACTAAGGTCATCTTGCACCATTTGGTTTTCGTTAATGGGAGCTAGGGTTTTGTCACCACGCTCTGATACTGTATTGAAAAGAAGAAGACGTTATATTCGCGGAAAAACCCTAGTATAGGCAGAAAAATCACGATAGAAGCAGCTCGTATTATTTTCTAATAATCAAAAGAGTACAAGAGGGGAGAATATATATAGACTATAATAAGTTCTAACAAAAAAGGAAATATAACTAGTCCCTAATTACACAACTACTCTTAGGGTTATAAACACTCCACTAGTCCCTAATTTCCAACATTAGTGTACTCTGTAATTTTGAGGACGTGTCCGTTTTATTGTTCGAAGGAATATGTAGCAATCATCATTTGCTGTTTTGAATAGATGCCTCCCAAATCATAGTGAGATTTGGGGGAGAGGAACGAATAGGTGTTTCGTGGTAGGGAATAGGATCGTAATAAGGTTTGGTTTTTCATTAGATCTGATGTTTCTCTTTGGGATTTGATTTCGAACTTTTGTAATTATTCCATCGGTGGCATACTCAATTTGCCCCTCCTTTTAGTTGGGGTGTTTTGTGGGCCGTTTTTTTGGTATGCGCTTGTATTCTTTTATTTTATTCTCAATGAAAGTTTGTTTTTATAAAAAAGAAAAAAAAGAAAAAATAAATAAATTAGATGCCTCCCAAATCTTTGAGATTCTTCTTATGAAATTGGTTCTTCCTTCATTTGAAGCTTGCCCAAAATTTCAGTGAACAAAAGCAAATATTTTTAATGCCACAGGAAGGATCAAACTACATTACAAACAATAATACCCCCTAAAGAACTACAAGAATCAATGTAGCTCAACCAAAATTTTCCTATTTGAAAGATTTTGTTTCCTGCGGAGGATGATAAAATTTGGGCTGGGCTGAGACGTATAACTTGTTGGTGAACTATTAGGAAACCTTTTCGTAAGATGTTAATTATTTATAACCGTACACAATGATTGAAATGTTTGTTGATATTTTGATATTTTCGTTAATTGAAGGGTTGGGCATCGAGTTAATGGTTAATTGATCTCTCCAATATCTTCCCATAAGTACAGATAAAAATGTCAAATTAGTTTGGGGGTAAAAAAAACTATTATTTATTTATAATTTTTTTTGTTTATTGAAATACTTGTCAACATCAAATATCTTATTGAAATATCCATAAAATTAATTCTTATTTTGTTATCGACATCAATACTTTTAATCATGGATTGTACCCTCTGAGGACTGTAGTTCTTAAGAATCTCTTGTTCAATTGATTCGTCTGTCAATCACTTGTTGTGATGCTTGCTTTTCTCATTCTCTCATCTTCTAATTGTTGCAGAAGAGCGGAGCAGGGTGTCAAATAATAACCGGAGCAAGCGTAGGAGAGACGTGTCTAACAGACCGTCTGTAAATTCAGATTTATTAATCAATTTGGAAGCGAGCAACAGTTCTATGGTACTGGACTACTTATATCTTTGTTACTCTTCTTCTTTTGCAAGATTTTTCCTGTGTCGTTAGGTGGATCATATATGTCTTTTCTTGAGGTTGTAGCTTTTAGCACAAAAACCAATTTTAGCATGTTCTCCTTTATCCTGCGGCTATGTCTGTTATCTTTCTCCTGGACTAGTTAGTTCTCATGGCTTGTTCTTGCATATACAATACATCATTATTTATATTATGATCAAACATTCAAGAAAAAGTCGAGAAAAAATGGATAGGGTGAGCTTAATTTTGGAGTTGTTATGTTTGTGAGAAATGTCATCACCCTAGAAGCATGGAGGTGGAAATGGGGAATATCCATGACACCACTAGGGCATGTGACAAGGACTCCACAAGACATAAAATGGTGCATGCCATATCAGAAATATTTTTCTTCAAATACTTCCGCAAGTTCCCAATGCTTCAAACAAGTTGGATTATAAATAGTTTAAAAATTTATGGTATTGGTATGTAGGTTAGAAATATTGAGACGACATATTTGGTCTGATACAATACTCAATAATGTGAGCTCTTGAAAATTGAATAACAAAATATGTCTATCTTTTGAAGACAGACCAAGTTTTGTGTGCCACCACTGGAGTGGAAATTCCCCCAATGAGTTGCTGCTGAGCTCTTTCTCTCCTGGACCTTGGTTTATCAGCTGATTGGGTTCGGTAGCTTTTGTTTCTCCCCTTTGGAGAAGTTAAGTTAGTTTGTTTTAACAATAATTTATTACCTCTTTCTCTCTCTCCTTCTATGTGTGAGTGCTGCTGTTCTTTTGGTTGGTTATGTTCAAAGTTAGGGTTGTTCACAGGTAACAGACAATGAGAGAGGAAGAATAGAAATAATTAAAAAATGTAAGGTTGGGTTGGGCAGCCGTTTTCTCTGTAGGAAAAATAGACTATGATCACTGTATCCATAAAACCAATCGTTTGATGTTGGTTTCAGTTGGTCATCGCAGTTTTCGGTCCAACTTTGTTCTGTTGGTTAATTCTTCAATTTCTGGAACCATCATGGATTGATCTTTATTTTCAGTGGTAGCATCTTATTAGCTGTTATTGTTGAAAATGTCATTTTGTAAGGATAAATAAAGTATATGCTGAAAATGGAATTATGTCTCTACTGCTTAATATTGAGCCAACATGTGATTTCTGTGCTATTGGCAGAAAGTGAAGCCTGCTCCACCGAAAGAGCCCAAATTCAGTTGTCCAATATGCATGGGTCCGTTAGTAGAAGAAACATCAACAAAGTGTGGTCATATTTTCTGTAAGGCATGCATCAGGGCTGCAATAGGCGTCCAGAGTAAATGCCCAACATGTAGGAAGAGAGTAACTGCCAAAGAACTGATTAGAGTATTCCTTCCTGGGACAAGCTTGGAGTGA

mRNA sequence

ATGCCACCAACTGAGAACCGAGATCAAGGAGAAACATCTCAACTGCGGCTTCAGGATGCACAGGTTAATCAACAACAGCCTGTACAGCCTGCAATGATCGACATTGAGGCCATTGATGACGATGTCATTGAATCATCCGCCAGAGCTTTTGCTGAAGCTAAAAATAAATCCAGACGAAATGCTAGGAAGAATGTAGTTGACGTGGATGCAGAAGAGCGGAGCAGGGTGTCAAATAATAACCGGAGCAAGCGTAGGAGAGACGTGTCTAACAGACCGTCTGTAAATTCAGATTTATTAATCAATTTGGAAGCGAGCAACAGTTCTATGAAAGTGAAGCCTGCTCCACCGAAAGAGCCCAAATTCAGTTGTCCAATATGCATGGGTCCGTTAGTAGAAGAAACATCAACAAAGTGTGGTCATATTTTCTGTAAGGCATGCATCAGGGCTGCAATAGGCGTCCAGAGTAAATGCCCAACATGTAGGAAGAGAGTAACTGCCAAAGAACTGATTAGAGTATTCCTTCCTGGGACAAGCTTGGAGTGA

Coding sequence (CDS)

ATGCCACCAACTGAGAACCGAGATCAAGGAGAAACATCTCAACTGCGGCTTCAGGATGCACAGGTTAATCAACAACAGCCTGTACAGCCTGCAATGATCGACATTGAGGCCATTGATGACGATGTCATTGAATCATCCGCCAGAGCTTTTGCTGAAGCTAAAAATAAATCCAGACGAAATGCTAGGAAGAATGTAGTTGACGTGGATGCAGAAGAGCGGAGCAGGGTGTCAAATAATAACCGGAGCAAGCGTAGGAGAGACGTGTCTAACAGACCGTCTGTAAATTCAGATTTATTAATCAATTTGGAAGCGAGCAACAGTTCTATGAAAGTGAAGCCTGCTCCACCGAAAGAGCCCAAATTCAGTTGTCCAATATGCATGGGTCCGTTAGTAGAAGAAACATCAACAAAGTGTGGTCATATTTTCTGTAAGGCATGCATCAGGGCTGCAATAGGCGTCCAGAGTAAATGCCCAACATGTAGGAAGAGAGTAACTGCCAAAGAACTGATTAGAGTATTCCTTCCTGGGACAAGCTTGGAGTGA

Protein sequence

MPPTENRDQGETSQLRLQDAQVNQQQPVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRNARKNVVDVDAEERSRVSNNNRSKRRRDVSNRPSVNSDLLINLEASNSSMKVKPAPPKEPKFSCPICMGPLVEETSTKCGHIFCKACIRAAIGVQSKCPTCRKRVTAKELIRVFLPGTSLE

Homology

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BLAST of IVF0015622 vs. ExPASy Swiss-Prot
Match: Q9CQ29 (RING finger protein 151 OS=Mus musculus OX=10090 GN=Rnf151 PE=1 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 5.1e-08
Identity = 26/59 (44.07%), Postives = 34/59 (57.63%), Query Frame = 0


Query: 114 APPKEPKFSCPICMGPLVEETSTKCGHIFCKACIRAAIGVQSKCPTCRKRVTAKELIRV 173
           A P + KF C +C G L   T   C HIFCK CI   +  Q+ CP CRK VT ++++ V
Sbjct: 11  ASPPDCKFLCSVCHGVLKRPTRLPCSHIFCKKCIFRWLARQNTCPCCRKEVTRRKMVEV 69

[Close]

BLAST of IVF0015622 vs. ExPASy Swiss-Prot
Match: Q3MV19 (TNF receptor-associated factor 6-A OS=Xenopus laevis OX=8355 GN=traf6-a PE=1 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 6.3e-06
Identity = 25/56 (44.64%), Postives = 32/56 (57.14%), Query Frame = 0


Query: 115 PPKEPKFSCPICMGPLVEETSTKCGHIFCKACIRAAI-GVQSKCPTCRKRVTAKEL 170
           PP E K+ CPIC+  L E   T CGH FCKACI  ++     KCP   + +  K+L
Sbjct: 64  PPLESKYECPICLMALREAVQTPCGHRFCKACILKSLRNAGHKCPVDNEILMEKQL 119

[Close]

BLAST of IVF0015622 vs. ExPASy Swiss-Prot
Match: B5DF45 (TNF receptor-associated factor 6 OS=Rattus norvegicus OX=10116 GN=Traf6 PE=2 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 1.1e-05
Identity = 24/45 (53.33%), Postives = 27/45 (60.00%), Query Frame = 0


Query: 115 PPKEPKFSCPICMGPLVEETSTKCGHIFCKACIRAAI-GVQSKCP 159
           PP E K+ CPIC+  L E   T CGH FCKACI  +I     KCP
Sbjct: 62  PPLESKYECPICLMALREAVQTPCGHRFCKACITKSIRDAGHKCP 106

[Close]

BLAST of IVF0015622 vs. ExPASy Swiss-Prot
Match: Q28DL4 (TNF receptor-associated factor 6 OS=Xenopus tropicalis OX=8364 GN=traf6 PE=2 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 1.1e-05
Identity = 25/56 (44.64%), Postives = 31/56 (55.36%), Query Frame = 0


Query: 115 PPKEPKFSCPICMGPLVEETSTKCGHIFCKACIRAAI-GVQSKCPTCRKRVTAKEL 170
           PP E K+ CPIC+  L E   T CGH FCKACI  +I     KCP   + +   +L
Sbjct: 64  PPLESKYECPICLMALREAVQTPCGHRFCKACILKSIRDAGHKCPVDNESLMENQL 119

[Close]

BLAST of IVF0015622 vs. ExPASy Swiss-Prot
Match: Q3ZCC3 (TNF receptor-associated factor 6 OS=Bos taurus OX=9913 GN=TRAF6 PE=2 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 1.8e-05
Identity = 24/45 (53.33%), Postives = 27/45 (60.00%), Query Frame = 0


Query: 115 PPKEPKFSCPICMGPLVEETSTKCGHIFCKACIRAAI-GVQSKCP 159
           PP E K+ CPIC+  L E   T CGH FCKACI  +I     KCP
Sbjct: 63  PPLESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCP 107

[Close]

BLAST of IVF0015622 vs. ExPASy TrEMBL
Match: A0A1S3CCB4 (E3 ubiquitin-protein ligase RNF4-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499213 PE=4 SV=1)

HSP 1 Score: 345.1 bits (884), Expect = 1.7e-91
Identity = 180/180 (100.00%), Postives = 180/180 (100.00%), Query Frame = 0


Query: 1   MPPTENRDQGETSQLRLQDAQVNQQQPVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRN 60
           MPPTENRDQGETSQLRLQDAQVNQQQPVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRN
Sbjct: 27  MPPTENRDQGETSQLRLQDAQVNQQQPVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRN 86

Query: 61  ARKNVVDVDAEERSRVSNNNRSKRRRDVSNRPSVNSDLLINLEASNSSMKVKPAPPKEPK 120
           ARKNVVDVDAEERSRVSNNNRSKRRRDVSNRPSVNSDLLINLEASNSSMKVKPAPPKEPK
Sbjct: 87  ARKNVVDVDAEERSRVSNNNRSKRRRDVSNRPSVNSDLLINLEASNSSMKVKPAPPKEPK 146

Query: 121 FSCPICMGPLVEETSTKCGHIFCKACIRAAIGVQSKCPTCRKRVTAKELIRVFLPGTSLE 180
           FSCPICMGPLVEETSTKCGHIFCKACIRAAIGVQSKCPTCRKRVTAKELIRVFLPGTSLE
Sbjct: 147 FSCPICMGPLVEETSTKCGHIFCKACIRAAIGVQSKCPTCRKRVTAKELIRVFLPGTSLE 206

[Close]

BLAST of IVF0015622 vs. ExPASy TrEMBL
Match: A0A1S3CBW2 (E3 ubiquitin-protein ligase RNF4-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499213 PE=4 SV=1)

HSP 1 Score: 338.6 bits (867), Expect = 1.6e-89
Identity = 179/180 (99.44%), Postives = 179/180 (99.44%), Query Frame = 0


Query: 1   MPPTENRDQGETSQLRLQDAQVNQQQPVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRN 60
           MPPTENRDQGETSQLRLQDAQVNQQQPVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRN
Sbjct: 27  MPPTENRDQGETSQLRLQDAQVNQQQPVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRN 86

Query: 61  ARKNVVDVDAEERSRVSNNNRSKRRRDVSNRPSVNSDLLINLEASNSSMKVKPAPPKEPK 120
           ARKNVVDVDA ERSRVSNNNRSKRRRDVSNRPSVNSDLLINLEASNSSMKVKPAPPKEPK
Sbjct: 87  ARKNVVDVDA-ERSRVSNNNRSKRRRDVSNRPSVNSDLLINLEASNSSMKVKPAPPKEPK 146

Query: 121 FSCPICMGPLVEETSTKCGHIFCKACIRAAIGVQSKCPTCRKRVTAKELIRVFLPGTSLE 180
           FSCPICMGPLVEETSTKCGHIFCKACIRAAIGVQSKCPTCRKRVTAKELIRVFLPGTSLE
Sbjct: 147 FSCPICMGPLVEETSTKCGHIFCKACIRAAIGVQSKCPTCRKRVTAKELIRVFLPGTSLE 205

[Close]

BLAST of IVF0015622 vs. ExPASy TrEMBL
Match: A0A6J1HQI7 (E3 ubiquitin-protein ligase RNF4-like OS=Cucurbita maxima OX=3661 GN=LOC111466888 PE=4 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 2.1e-81
Identity = 162/180 (90.00%), Postives = 168/180 (93.33%), Query Frame = 0


Query: 1   MPPTENRDQGETSQLRLQDAQVNQQQPVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRN 60
           MPPTENRDQGETSQ   Q+AQVNQQQ VQPAMIDIEAIDDDVIESSARAFAEAKNKSRRN
Sbjct: 27  MPPTENRDQGETSQFGFQEAQVNQQQSVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRN 86

Query: 61  ARKNVVDVDAEERSRVSNNNRSKRRRDVSNRPSVNSDLLINLEASNSSMKVKPAPPKEPK 120
           ARKN+VDVDAEERSR SNNNRSKRRRDV N+ +VNSDLLINLEASNSSMK K APPKEP 
Sbjct: 87  ARKNIVDVDAEERSRASNNNRSKRRRDVPNQQTVNSDLLINLEASNSSMKEKAAPPKEPN 146

Query: 121 FSCPICMGPLVEETSTKCGHIFCKACIRAAIGVQSKCPTCRKRVTAKELIRVFLPGTSLE 180
           FSCPICMGPLVEETST+CGHIFCKACI+ AI VQSKCPTCRKRVTAKELIRVFLPGTSLE
Sbjct: 147 FSCPICMGPLVEETSTRCGHIFCKACIKTAIAVQSKCPTCRKRVTAKELIRVFLPGTSLE 206

[Close]

BLAST of IVF0015622 vs. ExPASy TrEMBL
Match: A0A6J1HFU4 (E3 ubiquitin-protein ligase RNF4-like OS=Cucurbita moschata OX=3662 GN=LOC111463920 PE=4 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 3.1e-80
Identity = 160/180 (88.89%), Postives = 166/180 (92.22%), Query Frame = 0


Query: 1   MPPTENRDQGETSQLRLQDAQVNQQQPVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRN 60
           MPPTENRDQGETSQ    +AQVNQQQ VQPAMIDIEAIDDDVIESSARAFAEAKNKSRRN
Sbjct: 27  MPPTENRDQGETSQFGFPEAQVNQQQSVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRN 86

Query: 61  ARKNVVDVDAEERSRVSNNNRSKRRRDVSNRPSVNSDLLINLEASNSSMKVKPAPPKEPK 120
           ARKN+VDVDAEERSR SNNNRSKRRRDV N+ +VNSDLLINLE SNSSMK K APPKEP 
Sbjct: 87  ARKNIVDVDAEERSRASNNNRSKRRRDVPNQQTVNSDLLINLEGSNSSMKEKAAPPKEPN 146

Query: 121 FSCPICMGPLVEETSTKCGHIFCKACIRAAIGVQSKCPTCRKRVTAKELIRVFLPGTSLE 180
           FSCPICMGPLVEETST+CGHIFCKACI+ AI VQSKCPTCRKRVTAKELIRVFLPGTSLE
Sbjct: 147 FSCPICMGPLVEETSTRCGHIFCKACIKTAIAVQSKCPTCRKRVTAKELIRVFLPGTSLE 206

[Close]

BLAST of IVF0015622 vs. ExPASy TrEMBL
Match: A0A6J1E010 (E3 ubiquitin-protein ligase RNF4 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111024653 PE=4 SV=1)

HSP 1 Score: 307.0 bits (785), Expect = 5.2e-80
Identity = 159/180 (88.33%), Postives = 170/180 (94.44%), Query Frame = 0


Query: 1   MPPTENRDQGETSQLRLQDAQVNQQQPVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRN 60
           MPP+ENRDQGE SQL LQ+A  NQQQP+QP MIDIEAIDDDVIESSARAFAEAKNKSRRN
Sbjct: 27  MPPSENRDQGEPSQLGLQEAHSNQQQPLQPTMIDIEAIDDDVIESSARAFAEAKNKSRRN 86

Query: 61  ARKNVVDVDAEERSRVSNNNRSKRRRDVSNRPSVNSDLLINLEASNSSMKVKPAPPKEPK 120
           ARKN+VDVDAEERSRVSNN RSKRRR+VSN+ +VNS+LLINLEASNSS+K KP PPKEPK
Sbjct: 87  ARKNIVDVDAEERSRVSNNIRSKRRREVSNQRTVNSNLLINLEASNSSLKEKPVPPKEPK 146

Query: 121 FSCPICMGPLVEETSTKCGHIFCKACIRAAIGVQSKCPTCRKRVTAKELIRVFLPGTSLE 180
           FSCPICMGPLVEETST+CGHIFCKACI+AAI VQSKCPTCRKRVTAKELIRVFLPGTSLE
Sbjct: 147 FSCPICMGPLVEETSTRCGHIFCKACIKAAIAVQSKCPTCRKRVTAKELIRVFLPGTSLE 206

[Close]

BLAST of IVF0015622 vs. NCBI nr
Match: XP_008460369.1 (PREDICTED: E3 ubiquitin-protein ligase RNF4-like isoform X1 [Cucumis melo] >XP_008460370.1 PREDICTED: E3 ubiquitin-protein ligase RNF4-like isoform X1 [Cucumis melo] >XP_008460371.1 PREDICTED: E3 ubiquitin-protein ligase RNF4-like isoform X1 [Cucumis melo] >XP_008460372.1 PREDICTED: E3 ubiquitin-protein ligase RNF4-like isoform X1 [Cucumis melo] >XP_016902544.1 PREDICTED: E3 ubiquitin-protein ligase RNF4-like isoform X1 [Cucumis melo])

HSP 1 Score: 344 bits (883), Expect = 9.06e-119
Identity = 180/180 (100.00%), Postives = 180/180 (100.00%), Query Frame = 0


Query: 1   MPPTENRDQGETSQLRLQDAQVNQQQPVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRN 60
           MPPTENRDQGETSQLRLQDAQVNQQQPVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRN
Sbjct: 27  MPPTENRDQGETSQLRLQDAQVNQQQPVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRN 86

Query: 61  ARKNVVDVDAEERSRVSNNNRSKRRRDVSNRPSVNSDLLINLEASNSSMKVKPAPPKEPK 120
           ARKNVVDVDAEERSRVSNNNRSKRRRDVSNRPSVNSDLLINLEASNSSMKVKPAPPKEPK
Sbjct: 87  ARKNVVDVDAEERSRVSNNNRSKRRRDVSNRPSVNSDLLINLEASNSSMKVKPAPPKEPK 146

Query: 121 FSCPICMGPLVEETSTKCGHIFCKACIRAAIGVQSKCPTCRKRVTAKELIRVFLPGTSLE 180
           FSCPICMGPLVEETSTKCGHIFCKACIRAAIGVQSKCPTCRKRVTAKELIRVFLPGTSLE
Sbjct: 147 FSCPICMGPLVEETSTKCGHIFCKACIRAAIGVQSKCPTCRKRVTAKELIRVFLPGTSLE 206

[Close]

BLAST of IVF0015622 vs. NCBI nr
Match: XP_004144388.1 (E3 ubiquitin-protein ligase RNF4 [Cucumis sativus] >XP_031738436.1 E3 ubiquitin-protein ligase RNF4 [Cucumis sativus] >KAE8650852.1 hypothetical protein Csa_000772 [Cucumis sativus])

HSP 1 Score: 343 bits (880), Expect = 2.60e-118
Identity = 179/180 (99.44%), Postives = 180/180 (100.00%), Query Frame = 0


Query: 1   MPPTENRDQGETSQLRLQDAQVNQQQPVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRN 60
           MPPTENRDQGETSQLRLQDAQVNQQQPVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRN
Sbjct: 27  MPPTENRDQGETSQLRLQDAQVNQQQPVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRN 86

Query: 61  ARKNVVDVDAEERSRVSNNNRSKRRRDVSNRPSVNSDLLINLEASNSSMKVKPAPPKEPK 120
           ARKNVVDVDAEERSRVSNNNRSKRRRDVSNRPSVNSDLLINLEASNSSMKVKPAPPKEPK
Sbjct: 87  ARKNVVDVDAEERSRVSNNNRSKRRRDVSNRPSVNSDLLINLEASNSSMKVKPAPPKEPK 146

Query: 121 FSCPICMGPLVEETSTKCGHIFCKACIRAAIGVQSKCPTCRKRVTAKELIRVFLPGTSLE 180
           FSCPICMGPLVEETST+CGHIFCKACIRAAIGVQSKCPTCRKRVTAKELIRVFLPGTSLE
Sbjct: 147 FSCPICMGPLVEETSTRCGHIFCKACIRAAIGVQSKCPTCRKRVTAKELIRVFLPGTSLE 206

[Close]

BLAST of IVF0015622 vs. NCBI nr
Match: XP_008460373.1 (PREDICTED: E3 ubiquitin-protein ligase RNF4-like isoform X2 [Cucumis melo])

HSP 1 Score: 338 bits (867), Expect = 2.40e-116
Identity = 179/180 (99.44%), Postives = 179/180 (99.44%), Query Frame = 0


Query: 1   MPPTENRDQGETSQLRLQDAQVNQQQPVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRN 60
           MPPTENRDQGETSQLRLQDAQVNQQQPVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRN
Sbjct: 27  MPPTENRDQGETSQLRLQDAQVNQQQPVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRN 86

Query: 61  ARKNVVDVDAEERSRVSNNNRSKRRRDVSNRPSVNSDLLINLEASNSSMKVKPAPPKEPK 120
           ARKNVVDVDAE RSRVSNNNRSKRRRDVSNRPSVNSDLLINLEASNSSMKVKPAPPKEPK
Sbjct: 87  ARKNVVDVDAE-RSRVSNNNRSKRRRDVSNRPSVNSDLLINLEASNSSMKVKPAPPKEPK 146

Query: 121 FSCPICMGPLVEETSTKCGHIFCKACIRAAIGVQSKCPTCRKRVTAKELIRVFLPGTSLE 180
           FSCPICMGPLVEETSTKCGHIFCKACIRAAIGVQSKCPTCRKRVTAKELIRVFLPGTSLE
Sbjct: 147 FSCPICMGPLVEETSTKCGHIFCKACIRAAIGVQSKCPTCRKRVTAKELIRVFLPGTSLE 205

[Close]

BLAST of IVF0015622 vs. NCBI nr
Match: XP_038888129.1 (E3 ubiquitin-protein ligase RNF4-like [Benincasa hispida] >XP_038888130.1 E3 ubiquitin-protein ligase RNF4-like [Benincasa hispida] >XP_038888131.1 E3 ubiquitin-protein ligase RNF4-like [Benincasa hispida] >XP_038888132.1 E3 ubiquitin-protein ligase RNF4-like [Benincasa hispida] >XP_038888133.1 E3 ubiquitin-protein ligase RNF4-like [Benincasa hispida] >XP_038888134.1 E3 ubiquitin-protein ligase RNF4-like [Benincasa hispida] >XP_038888135.1 E3 ubiquitin-protein ligase RNF4-like [Benincasa hispida])

HSP 1 Score: 321 bits (822), Expect = 1.79e-109
Identity = 167/180 (92.78%), Postives = 174/180 (96.67%), Query Frame = 0


Query: 1   MPPTENRDQGETSQLRLQDAQVNQQQPVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRN 60
           MPPTENRDQGETSQLR Q+AQVNQQQ VQPAMIDIEAIDDDVIESSARAFAEAKNKSRRN
Sbjct: 27  MPPTENRDQGETSQLRFQEAQVNQQQHVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRN 86

Query: 61  ARKNVVDVDAEERSRVSNNNRSKRRRDVSNRPSVNSDLLINLEASNSSMKVKPAPPKEPK 120
           ARKN+VDVDAEE ++VSNNNRSKRRRDVSN+  VNSDLLINLEASNSSMKVKPAPPKEPK
Sbjct: 87  ARKNIVDVDAEEWTKVSNNNRSKRRRDVSNQQPVNSDLLINLEASNSSMKVKPAPPKEPK 146

Query: 121 FSCPICMGPLVEETSTKCGHIFCKACIRAAIGVQSKCPTCRKRVTAKELIRVFLPGTSLE 180
           FSCPICMGPLVEETST+CGHIFCKACIRAAI VQ+KCPTCRKRVTAKELIRVFLPGTSLE
Sbjct: 147 FSCPICMGPLVEETSTRCGHIFCKACIRAAIAVQNKCPTCRKRVTAKELIRVFLPGTSLE 206

[Close]

BLAST of IVF0015622 vs. NCBI nr
Match: XP_022967334.1 (E3 ubiquitin-protein ligase RNF4-like [Cucurbita maxima] >XP_022967335.1 E3 ubiquitin-protein ligase RNF4-like [Cucurbita maxima] >XP_022967336.1 E3 ubiquitin-protein ligase RNF4-like [Cucurbita maxima] >XP_022967337.1 E3 ubiquitin-protein ligase RNF4-like [Cucurbita maxima] >XP_022967338.1 E3 ubiquitin-protein ligase RNF4-like [Cucurbita maxima] >XP_022967339.1 E3 ubiquitin-protein ligase RNF4-like [Cucurbita maxima])

HSP 1 Score: 311 bits (796), Expect = 1.64e-105
Identity = 162/180 (90.00%), Postives = 168/180 (93.33%), Query Frame = 0


Query: 1   MPPTENRDQGETSQLRLQDAQVNQQQPVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRN 60
           MPPTENRDQGETSQ   Q+AQVNQQQ VQPAMIDIEAIDDDVIESSARAFAEAKNKSRRN
Sbjct: 27  MPPTENRDQGETSQFGFQEAQVNQQQSVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRN 86

Query: 61  ARKNVVDVDAEERSRVSNNNRSKRRRDVSNRPSVNSDLLINLEASNSSMKVKPAPPKEPK 120
           ARKN+VDVDAEERSR SNNNRSKRRRDV N+ +VNSDLLINLEASNSSMK K APPKEP 
Sbjct: 87  ARKNIVDVDAEERSRASNNNRSKRRRDVPNQQTVNSDLLINLEASNSSMKEKAAPPKEPN 146

Query: 121 FSCPICMGPLVEETSTKCGHIFCKACIRAAIGVQSKCPTCRKRVTAKELIRVFLPGTSLE 180
           FSCPICMGPLVEETST+CGHIFCKACI+ AI VQSKCPTCRKRVTAKELIRVFLPGTSLE
Sbjct: 147 FSCPICMGPLVEETSTRCGHIFCKACIKTAIAVQSKCPTCRKRVTAKELIRVFLPGTSLE 206

[Close]

BLAST of IVF0015622 vs. TAIR 10
Match: AT5G48655.2 (RING/U-box superfamily protein )

HSP 1 Score: 156.8 bits (395), Expect = 1.7e-38
Identity = 95/178 (53.37%), Postives = 119/178 (66.85%), Query Frame = 0


Query: 9   QGETSQLRLQDAQVNQQQPVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRNARKN--VV 68
           +G ++ +R     +   QP  P MID++AI+DDVIESSA AFAEAK+KS RNAR+   +V
Sbjct: 29  EGTSASVRTLTVPITPSQPA-PTMIDVDAIEDDVIESSASAFAEAKSKS-RNARRRPLMV 88

Query: 69  DVDAEERSRVSNNNRSKRRRDVSN-------RPSVNSDLLINLEASNSSMKVKPAPPKEP 128
           DV++   +R   N  +KRRR  S+         SVN +  +N+ +  S  K    PP+EP
Sbjct: 89  DVESGGTTRFPANISNKRRRIPSSESVIDCEHASVNDE--VNMSSRVSRSKAPAPPPEEP 148

Query: 129 KFSCPICMGPLVEETSTKCGHIFCKACIRAAIGVQSKCPTCRKRVTAKELIRVFLPGT 178
           KF+CPICM P  EE STKCGHIFCK CI+ AI  Q KCPTCRK+VTAKELIRVFLP T
Sbjct: 149 KFTCPICMCPFTEEMSTKCGHIFCKGCIKMAISRQGKCPTCRKKVTAKELIRVFLPTT 202

[Close]

BLAST of IVF0015622 vs. TAIR 10
Match: AT5G48655.1 (RING/U-box superfamily protein )

HSP 1 Score: 156.8 bits (395), Expect = 1.7e-38
Identity = 95/178 (53.37%), Postives = 119/178 (66.85%), Query Frame = 0


Query: 9   QGETSQLRLQDAQVNQQQPVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRNARKN--VV 68
           +G ++ +R     +   QP  P MID++AI+DDVIESSA AFAEAK+KS RNAR+   +V
Sbjct: 29  EGTSASVRTLTVPITPSQPA-PTMIDVDAIEDDVIESSASAFAEAKSKS-RNARRRPLMV 88

Query: 69  DVDAEERSRVSNNNRSKRRRDVSN-------RPSVNSDLLINLEASNSSMKVKPAPPKEP 128
           DV++   +R   N  +KRRR  S+         SVN +  +N+ +  S  K    PP+EP
Sbjct: 89  DVESGGTTRFPANISNKRRRIPSSESVIDCEHASVNDE--VNMSSRVSRSKAPAPPPEEP 148

Query: 129 KFSCPICMGPLVEETSTKCGHIFCKACIRAAIGVQSKCPTCRKRVTAKELIRVFLPGT 178
           KF+CPICM P  EE STKCGHIFCK CI+ AI  Q KCPTCRK+VTAKELIRVFLP T
Sbjct: 149 KFTCPICMCPFTEEMSTKCGHIFCKGCIKMAISRQGKCPTCRKKVTAKELIRVFLPTT 202

[Close]

BLAST of IVF0015622 vs. TAIR 10
Match: AT5G48655.3 (RING/U-box superfamily protein )

HSP 1 Score: 156.8 bits (395), Expect = 1.7e-38
Identity = 95/178 (53.37%), Postives = 119/178 (66.85%), Query Frame = 0


Query: 9   QGETSQLRLQDAQVNQQQPVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRNARKN--VV 68
           +G ++ +R     +   QP  P MID++AI+DDVIESSA AFAEAK+KS RNAR+   +V
Sbjct: 29  EGTSASVRTLTVPITPSQPA-PTMIDVDAIEDDVIESSASAFAEAKSKS-RNARRRPLMV 88

Query: 69  DVDAEERSRVSNNNRSKRRRDVSN-------RPSVNSDLLINLEASNSSMKVKPAPPKEP 128
           DV++   +R   N  +KRRR  S+         SVN +  +N+ +  S  K    PP+EP
Sbjct: 89  DVESGGTTRFPANISNKRRRIPSSESVIDCEHASVNDE--VNMSSRVSRSKAPAPPPEEP 148

Query: 129 KFSCPICMGPLVEETSTKCGHIFCKACIRAAIGVQSKCPTCRKRVTAKELIRVFLPGT 178
           KF+CPICM P  EE STKCGHIFCK CI+ AI  Q KCPTCRK+VTAKELIRVFLP T
Sbjct: 149 KFTCPICMCPFTEEMSTKCGHIFCKGCIKMAISRQGKCPTCRKKVTAKELIRVFLPTT 202

[Close]

BLAST of IVF0015622 vs. TAIR 10
Match: AT3G07200.1 (RING/U-box superfamily protein )

HSP 1 Score: 136.0 bits (341), Expect = 3.1e-32
Identity = 90/179 (50.28%), Postives = 113/179 (63.13%), Query Frame = 0


Query: 7   RDQGETSQLRLQDAQVNQQQPVQPAM------IDIEAI--DDDVIESSARAFAEAKNKSR 66
           R  G T      D QV  Q P  P +      I++ AI  DDDV+ES+A AFA+AKNKS 
Sbjct: 14  RRDGVTQNEHQGDQQVADQAPTVPQIVATPPRINVVAIEDDDDVVESTASAFAQAKNKS- 73

Query: 67  RNARKNVVDVDAEERSRVSNNNRSKRRRDVSNRPSVNSDLLINLEASNSSMKVKPAPPKE 126
           R+AR+    VD E     +  NRS RRR  S++ SV+S   + L     S  V P P +E
Sbjct: 74  RSARRGSQVVDVES----AGANRSTRRR--SDQTSVDS---VELNKPRKSKAVAP-PVEE 133

Query: 127 PKFSCPICMGPLVEETSTKCGHIFCKACIRAAIGVQSKCPTCRKRVTAKELIRVFLPGT 178
           PKFSCPIC+ P  +E STKCGHIFCK CI+ A+ +Q+KCPTCRK++T K+LIRVFLP T
Sbjct: 134 PKFSCPICLCPFTQEVSTKCGHIFCKKCIKNALSLQAKCPTCRKKITVKDLIRVFLPTT 181

[Close]

BLAST of IVF0015622 vs. TAIR 10
Match: AT3G07200.2 (RING/U-box superfamily protein )

HSP 1 Score: 136.0 bits (341), Expect = 3.1e-32
Identity = 90/179 (50.28%), Postives = 113/179 (63.13%), Query Frame = 0


Query: 7   RDQGETSQLRLQDAQVNQQQPVQPAM------IDIEAI--DDDVIESSARAFAEAKNKSR 66
           R  G T      D QV  Q P  P +      I++ AI  DDDV+ES+A AFA+AKNKS 
Sbjct: 14  RRDGVTQNEHQGDQQVADQAPTVPQIVATPPRINVVAIEDDDDVVESTASAFAQAKNKS- 73

Query: 67  RNARKNVVDVDAEERSRVSNNNRSKRRRDVSNRPSVNSDLLINLEASNSSMKVKPAPPKE 126
           R+AR+    VD E     +  NRS RRR  S++ SV+S   + L     S  V P P +E
Sbjct: 74  RSARRGSQVVDVES----AGANRSTRRR--SDQTSVDS---VELNKPRKSKAVAP-PVEE 133

Query: 127 PKFSCPICMGPLVEETSTKCGHIFCKACIRAAIGVQSKCPTCRKRVTAKELIRVFLPGT 178
           PKFSCPIC+ P  +E STKCGHIFCK CI+ A+ +Q+KCPTCRK++T K+LIRVFLP T
Sbjct: 134 PKFSCPICLCPFTQEVSTKCGHIFCKKCIKNALSLQAKCPTCRKKITVKDLIRVFLPTT 181

The following BLAST results are available for this feature:

BLAST of IVF0015622 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9CQ29	5.1e-08	44.07	RING finger protein 151 OS=Mus musculus OX=10090 GN=Rnf151 PE=1 SV=1	[more]
Q3MV19	6.3e-06	44.64	TNF receptor-associated factor 6-A OS=Xenopus laevis OX=8355 GN=traf6-a PE=1 SV=...	[more]
B5DF45	1.1e-05	53.33	TNF receptor-associated factor 6 OS=Rattus norvegicus OX=10116 GN=Traf6 PE=2 SV=...	[more]
Q28DL4	1.1e-05	44.64	TNF receptor-associated factor 6 OS=Xenopus tropicalis OX=8364 GN=traf6 PE=2 SV=...	[more]
Q3ZCC3	1.8e-05	53.33	TNF receptor-associated factor 6 OS=Bos taurus OX=9913 GN=TRAF6 PE=2 SV=1	[more]

BLAST of IVF0015622 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CCB4	1.7e-91	100.00	E3 ubiquitin-protein ligase RNF4-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A1S3CBW2	1.6e-89	99.44	E3 ubiquitin-protein ligase RNF4-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A6J1HQI7	2.1e-81	90.00	E3 ubiquitin-protein ligase RNF4-like OS=Cucurbita maxima OX=3661 GN=LOC11146688...	[more]
A0A6J1HFU4	3.1e-80	88.89	E3 ubiquitin-protein ligase RNF4-like OS=Cucurbita moschata OX=3662 GN=LOC111463...	[more]
A0A6J1E010	5.2e-80	88.33	E3 ubiquitin-protein ligase RNF4 isoform X2 OS=Momordica charantia OX=3673 GN=LO...	[more]

BLAST of IVF0015622 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008460369.1	9.06e-119	100.00	PREDICTED: E3 ubiquitin-protein ligase RNF4-like isoform X1 [Cucumis melo] >XP_0...	[more]
XP_004144388.1	2.60e-118	99.44	E3 ubiquitin-protein ligase RNF4 [Cucumis sativus] >XP_031738436.1 E3 ubiquitin-...	[more]
XP_008460373.1	2.40e-116	99.44	PREDICTED: E3 ubiquitin-protein ligase RNF4-like isoform X2 [Cucumis melo]	[more]
XP_038888129.1	1.79e-109	92.78	E3 ubiquitin-protein ligase RNF4-like [Benincasa hispida] >XP_038888130.1 E3 ubi...	[more]
XP_022967334.1	1.64e-105	90.00	E3 ubiquitin-protein ligase RNF4-like [Cucurbita maxima] >XP_022967335.1 E3 ubiq...	[more]

BLAST of IVF0015622 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G48655.2	1.7e-38	53.37	RING/U-box superfamily protein	[more]
AT5G48655.1	1.7e-38	53.37	RING/U-box superfamily protein	[more]
AT5G48655.3	1.7e-38	53.37	RING/U-box superfamily protein	[more]
AT3G07200.1	3.1e-32	50.28	RING/U-box superfamily protein	[more]
AT3G07200.2	3.1e-32	50.28	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 123..160 e-value: 2.5E-5 score: 33.7
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 123..161 score: 12.504031
None	No IPR available	PFAM	PF13923	zf-C3HC4_2	coord: 123..160 e-value: 3.3E-10 score: 39.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 52..98
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 52..91
None	No IPR available	PANTHER	PTHR47094	ELFLESS, ISOFORM B	coord: 13..178
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 116..167
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 99..176 e-value: 6.0E-18 score: 66.7
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 138..147

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0015622.2	IVF0015622.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding