IVF0015582 (gene) Melon (IVF77) v1

Overview
NameIVF0015582
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionsuccinate dehydrogenase subunit 6, mitochondrial
Locationchr02: 7377463 .. 7386545 (-)
RNA-Seq ExpressionIVF0015582
SyntenyIVF0015582
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAACGAGCTTTGAAGAGCGAGATTGGAGAGCTAGAAGAGAGAACAGTTTTCAGGATTCTGATTTCAATCGGATTTAGCTTCTAAAATCTCAATCTTAATCTGTTTTTTGAGGGAGCAATCATGGAAGATTCGTCCTCTCAATCCTTCTTCAGGAAGCACTGGGAAGGCTACAAGGAGTTTTGGTCCGAGAGATTCTCAATTCTCGACAACTATAGCCCCTACGTCCAGCGCCCGACCCCTCTTCCTTCATGGTCTTCCTCCGATGTCGAGGAATTTATTGCTTCTGACCCCGTTCATGGCCCCGTTGTAATTCATCCTTCACTTCTTTCCTCTTTTACTTCTTTTACTTCTTCTGTTGCCTGCTTCTGAGTTGATGTCACTCGGTGTTTCATATCATCTCGTTTGTTTTTTTGATCCATGCATGATGGGGTTTGAGGGTTTTGCTGTTTCTTGAATCCCACAATTAAATTTTCCTTTGAGGGTGAACATATCCAACTTGAGTTTATTCTTAGATTCGTATATCTGAAATTAAATGTGTTCATTAATATTTTGTCTGGAGATTAGGTAATGGAGTTTTTTTTTTTCCTTTGAGCTTGGGATAATCTGAAATTTCCTTGCCCAATGAGTGTTGGTACCCGATGGCTTGAGTTATAATATTGTATGACTCTTAGTAGGGAACTGGACTAAATATTTCCTTTTAGAATGCTTTTTATGGTCTGTTGCTGCCAATTTTACAAGTACATTTTTTAAAATGAAAAGTTGGATAGAAGGGACGATTTCGTTGATAACGAAATAAAGGAGTAAAAACTCCAAGCACCTTATTGGTGAGTTACAAGAAAGAAGATCAATTGGAGATGAAAAAAGATCAGCTATGAAGTGCAAAACAGTGCTGATTTTTACGCCAAAAGAAAACCCTATTCTCAAAAGAAGAGAATACACCATTTCGTTCTCCCCAAAGATGCCACAAGAACATACGGATTTTGGCAACCAAAGAGTCTTCCTCAAACCACAAAATGGGTTCCCGCCCAAACAAAGCAAGGAGATCGTGCTTCCAAAAGTATGTACCAAAAACAAGATGACTAAGAGATTTAGCATTTGAATTGCACATAACACACCAAGAAGGTGTCAAACACATAATAAGGAGATCTTGCTTTCATTTTAGAAGTACCTAATAGTAGTCTTTTGAAACCGTTTCTATCATAACAAGTGAAATAATATTTTCCTTTTGAACTTTTATTTATAATCATGAGTGTCCAGGCCAGTTTACGCAAATCCCGACTAATTTCATGGGACAACTCGCTTGACCCTACAACATTTTGGGTCTCAAAAAAACTTATAGGAAATTAATTCTTAAGTAGGTCACCGCCATGAGTTTTATGGTAAATAGTTAGATCATGGATTCATTATATGATCTTCCTTGCCTTCTTAAGTTCACTACTTGGCCGGGGTGCTTGCTCTATTCTTTTTCTGTTTAGTTTATTCCTACACATTCTTCTGTATGAAATTTTGATAACTACTTAAGTAGCATATCACCTTAAAGACAGGCGGGTTAAGCATGGTTGTCATTTTGTTTCACATTTTTCCAACGTAGCGGGAAGGCAAAGGCAGATTCCTCAAATTTCTGTTAGTAAGAGTTCATGTACATGCTTCTAGATTCCTCATTCATTGGCTGCTTATTGTTCCTTTTCAGTTAAAGACTGCCAGAGAGGCTGTAAACTTTGGTCTCACAGGAAGTGTTATTGGAGCTGTATCGACTGCAGGTGTTGCATGGAAATACTCAAAAAGTTTACATGGTATTCAACTCCCTTGTCTTTCCATTTGACTGCCAACTTCATATCTGTAAAAGGCATACCAGTAGCGTTCAAAATATCCTCTTACTTTACTACTGCTAACATTAACAATTGTTTCTCTTTTTGAATTTTTAAGTATAACGTGGTTCAACCATATCTGCAATCATATCTCTTCAAGTTACATTCCTTTTCTTGTTTCCATCTCTATGCAAGTTCCAATGTCCTTTTCAAACCAATACAGCACATTTTTATTTTCATTCGCTAAAAGTAAAACTTGGGTGGTACTATACTGTACTTACCACTCAAATAGGTCACAAGTTTGGTTGACATGAACGTATACAGTATACTTGCTTAAAGCAATTTGTGATTTATTTAATAGGGTGATTGATAGAACACCAAGTAGTGTGTTCTATTTGTTCATTAATCAACCAAACTTTTACAGAATAACAGTAATCAAACAAGTCTTGAAAACACAGAACAACTTAAGAACAAGTACAGAATTCAACCAATTCAAAATGAAACATCAAACAGAAAGTTACTTTCACGTAAATGGAAACAACTTCTAAACACTATGGTAACTGACACTCTCTGTAATTCCTAGACTCCAGGAAACTACAGCCCTCTACTTCCAGAAACTGATTAACCACCCCCATCTTCCCTTCCTGCTTTCCCTTTTAACTCCATCCCATGTAACTAACCGTGGTTCCCACCAAGGTGGTTTCCACTTCCTCCTCCATTTCCCTTTCTCTTTTGCACGTGTAACTTCTCCCTTTTTCTTCCTACTATATTGTAAAATAATTGGTGGTCTATCAGTGATATATTGATTAGTCTCAAGTTGGAAACGTGCAATGTCCTGTTGTAGAATACTGACATCCTTAAGGCTCCAATTCTTGTTTTAAGAGCTGGCTTTGTTTGTCAAGATCTTAAGAATCTTTTATGTTTAAATCTGCTGCGTCCAAGCAAACAAACTAGCTTGGTTCAATGTTTATTATGAGCATTGTGTTCTATATCATACCAAAGCCACATGATTCATCATACCAAAACCAGAAGATTCCGATGATGGTTCCAATGTTAGTGTCAGCAGTGAAGAGTTAGAGCAACATAGCATTCATACAGTAGAAGAAGAACAATACAGTGATTTATTGGGGGAAGCGTATAAATCAATCCTCCTTCAGCACGAGCAACTTCCACCCTCCCGAATCCCTTCTAAGTTCAGTTCTCTCGTCAATAAATGTGGTCTACAACTGCAGATAATCTCCTCCCCTTGACCATGAAGATTTTAACCTGGAATACAATGATAAATCTGAAGCAACAGCACTGAAGCACTTCTTACAATCTATTCATCTGGACATAGTTCTAATCCAAGAAACAAAGAAGTCGGACATTGACCACCAATTCATCAAATCAATTTGGAGTTCAAATGGAATCGGCTGGATGTTTGTAGAGGCTTTTGGAAGATTGGGTGGCATGCTTACAATGTGGGACGAAAGCAAGGTTGCTCAATTGAATTCCTCAAGGCGGGTATTCTCTTTCAGTAAAATTCAAGACTCAATGCAACAATGTCTGTTGGATGACAAATATATATAGAGCAACTAATTACAGAGAAAGGAAATTCTTTTGGCCAGAACTGATTTCTCTATTACATTACTGTTTGGAACCATGGTGCTTAGGAGAAGACTTCAATATAACCAGATGGGCCTATGAAAGATCACCATTGGGTAGGACAACAAAAGGAATGAAAAAGTTTGACAATTTCTTCAAGGAAGCTGCCTTACAGGACATACCCTTATCAAATGGACTGTTCACTTGGTCTAGAGAAGAAATTTCCAATTCACATTTTCTAATTGATCGTTTCCTTGTTACCAAGGACTGGGACGACTTATTTCCAATTCCACTGTCAATTGAAAAGCAAAAATTCTCTCAGACCGTTTTCCACTGCTAATGGAAACATGTTCGATAAGCTGGGCCCTAGTCCTTTTCGTTTCTGTAACAGCTGGTTGTTTCCAATTGCTCAAGAGAAATTTGTAAAGCGCTAGAGGAAGATCAATCAAATGGTTGCGCAGGATTTGTCTTAAATCTCAAACTTCGAAAAGTCAAGGGAAAAGTAAAAGCATGGCCCGCCGACTATGAAAAAGAAAGACAAGGGAAAGAGAATGATCTTATTCCGGAGTTGGAATTCTTCGATTCAAAGGCTGAACAGAGCACACTCTCTTCAACGGAGTAAGATATTTGTTTTGCAGTCAAATGAGGTTTAATAATATTGCATTACTTGGAAGAAAGAAATCTGATTCAGAAAAGCAAATTGAATTGGTTGAGGTTGGGCGATGAGAATACATCCTTTTTCTATCGTTTTCTTGCAGCAAAAAAGACGAAATTGTTTACTGAAATACTCTCTTTAGACGAAGTACCAATAACCTCATTTAGAGCCATTGAAGGTGAAATTCTGCATTATTTTGAACCCCTCTATAAAAAAGCTCACAGGCCCTAGAATCTTCCTCTCCAATCTATTTTGGAAACAGGTTGGTGCATCTCAAAATTCCTTCTCAATGGCATCATTCAATGCGGAAGAAATCCTACTAGCCATAAAAGCTCTTGGGAAAAATAAGGCACCAGATCCCGACAGTTTCACAGTGGAACTCTTCCTAGAATATTAGAATTTGTTCAAAGAGGTCTTCCAAAAATGTTCCACAAATTTGTGAAAATGGAAGGCTGAATGCTTGCATCAAGGAAAACTTTGTCTTATTCAAAAAAAAAAAAAAAAAAAGAAGAATCCCTCTTTGTCAAAGATTTTTGGCCCATTAGTCTCACCACATCTTCCTACAAAAGCATTACCAAAATCTTGGCAGAAAGAATGGAGAAAGTCATGCCCTCAATAATAGCCAATATTCAAAATAGCCAATATTCAAAGTGCTTTCATAAGAGATGCCAAATTTTGGATCCAATCCTTATAGCAAACGAGGCAGTGGAGGACTACCGAGTAAGGAAGAAAAAAGGTTGGATTCTCAAAATTAACCTCGAAAAGGCATTTGACCGAGTAAAATCTATTTTTCTAGACAGCATCGTCAAGCATATGGGTTTTCATCCAAAATGGATGGAGTGGATAAATGTATCTATCCAACACCTAAAATTCTTGATCTTGATTAATGGTCGACCATGAGGCTACATCTTAGCATCAAAAGATATACGTCAATGGGATCCACTATCCCCCCTTCATATTTCTTCTAATCAGTGAGGTTCTCAGCCTATTAATCTCACAGGCACATCAGAATGGTTTATTCGAAGGCTTTATGGTTGGGACAGACAAAATCCATCTCTCCATCTGATAAGCGCATAAAATGTGCTTAATTTTACTTCTTATTTAGGGCTGATTTTATTGGATTTAATGTGTTTTATAGTGTTTCTTAGCAAATTATGGCTAATTTATCATTTCGGATAAAAATAGACGAAAGCGGGCAAACCCAAGTCAATTTAGAACAAAAATGAAGGATATATGCGAGATTACAAAATTTTCCCTAGAAGAAGGGCTGCGTCGCATCACTACCTATAGAGTAGCAACGAGGCCCACAAGGAGATGATGCGTCGAGTGGTCCCATGCGTGTGATGAGTAGGCATCGAAAGTAGACAGCGTCACAACGTTGTGCAACAGACACCACATAGTGCACTCGGCAAACGACTAGTGCGGTTGGTGAAGATGCCCTACAGCGTCATAATGTGCCTATAGCGTTGCAAGGATATCTCCCTATCCAACATGTATAAATAGGGCTTCAATTTGTCATTTTAAGCTTCCCATTTGATTCCAAAACATCCCAATCATGGGAATCTCTCCTCCATACTTTCTTTCTTTTGTGCTACTTATAGTGTTGTGAGTTAAGGGATTTATTTTGGAGGCCATTTGAGTTCCGGAGGCATAAATCAAGGCATTCTAGGAGGTTTTCAATGAGAATGAAGTATTCAAGATTTGTTCTTTTTTGGTTCCTTCTATTCTTTTCACTATTATGCTTGATATTTCTTATGAGAATATGTCTTTCAAAGCAGCTAATTTTTCTAGTTTTAGGGTGTTTGATTTATTTTCATATGGATTTAAGATTGTAATTTGTGCTTTCATGGATATTGTTGAATTTTATGTTTTTTAATGTTATTATGCTTATCTCATATTAAATTGTCATCAATATATTTTAGGTTGAATGTTGATATCAAGAGATAATATGTTTGCCTGGACTTGTAACGTTAAATCGTTATTGAACCTTTCATGAAAATAGCTAGGTCGATAATGAAAGTTGTTGACGACAATACTGCCTTGCTCTTAATTTGGTATCAAAAAATTAGTTATCAATCAAGTTGCATGAGAATGGGTTGTTTCTTAGAGAAAATAATCTTGATTTAAGTTTCTAGACTTATGCATAATGTTCATAAAAGATTCCATGGTTGCATAAATTACAACTTAATGAAGTATTTAAAAAAATCAGTAGGGAACATTCCATATCTTGAATTTTCATTTTTATTATTGTCTTCTTTATTCAACTCAATTGAAACAAATCTAACCTCATTTTCCATTGCCTTCGATAAAATTAATTCAATTTTAGAATAGCCAAGTTAAAACCTAATTTTGATCCTTGAGGGATACTCGGCCTTCTAAGCAGTTTTATTACAACTTGACCACGTACACTTGCGTGACCCACATCAGCATCTTTCAATTTTCCAATGAAACCGCTTCTGTTTAGTAAATACAACGAGACATCTTTGAACAATCTTATTGATACAGTTGGTTTCCTTGAATGGTGTTCCAGTCAGAAAGTAAGTTGGGAAAAATCAGCTCTGTGAGCAGTCAACATCGATGCTTCCACTATCCAATCAACAGTTGATCGTATGGGTTGTACGACTGGTTCCATTCCATTCTGCATTCGCTTGCTTGGACTACCTCTAGGAGGTTATCCAGCAAAGCTAACCTTCTGGCAGCCTGTCATTGATAAAATTCATCTGAAACCGATCATTGGAATATGTATGATCTGTCTAGAGGTGGCTGCCTAATACTTTGCAATTTGGTTCTTGCTAACCTTCCAACCTATTATTTCTATTATTTATCTGTCTTCCAAATGTCGAGGTCAGCCAATTCTGTTCATTTTTTTCTGGGAAGGACAAAAGGGCAGCCAGCTGAACCACCTTGTGAAATGGAGCACCGCGTCAAAAGCTTTATCTGATGGGGGTCTTGGCTTGGACTGAAAAACGGGAACTTAGCCTTGTTGTTCAAGTGGAATTGGCGTGTTTTAAGGAACTGGAGGCGTTTTGCTGCAAGATCATCAAAAGTATACATGGCAGTGCCACTGATGAATTTCACTGGCCTCTGGGAAGTTTGGGCTTAGTTTATGCAGCCCATGGATTAGTATCTAAAAAGTATGGTCAAAATTTAATCATTTTGCAACCTTTAAATAGGGTGATGGAAGAAGAATTGCATTCTGGGAAGCTCCTTGGTGCTTGGAACAGCTACTAAAGCAGATTTTTCCTAATCTGACCATATTACCAACAAAGAAGGCAATGTATTCTCTCATTGGGACCCTGCAACTTCATCCTGGAATCTTTCTTTTTGACATGCTATAAGAATGAAGAAATTGCAGATTTCCGAGCACTTCTATCTAGCATCCATGGTAAAACTCGATCGTTTCTAACTGAGGCAAAACGATCTAACCAGTCATATGGAATCAAAACGATCGTTTCTAACTGCCTTGCATCCTCTCGAAAAGAACATCTATTGAGCAATATGGAAATCAAAAAGTCCCAAAAGAGCGAACGTTCTAATTTGGGTCATGCTTTTTGGATCCCTTAATTGCTCGGTCACTCTTCAATCAAAACTCCGAGGCCATGTCATTCCCCCTCCATTTTTCCATTTTGTAAAGCTTCTGGAGAGGATCTACAACTTCTTTTCTTTGAATGCTCATTCTCTGGTAAGTGTTGGTGGAAACTATTTTCCCTTTTTCACTTGCAATTGGTCTTTGGACAATCCTTCAAGGACAATGTGCTTCAAGTTCTCAGCAGTCCACATTTACCTCCAAAAGCACAAACGCTATAGTTTAATGTGGTTTAAGCCTTTCCTTCAAAAGCACAAACATCATAGTATAATGCAGTTGAAGCCTTTCTCTTAGAACTCTCGTTCGAATGAAATCAAGGAGTTTTTCATGACAAATTCTATGACTGGTTAGATCGTTTTGCCTCAGCTCGCCTTCTTGCTTCGTCTTGGTGCTCCGTATCTAAACTGTTTGGTGATTGCTTAATTTAAGACATTTGCCTCAATTGGACTGTGTTCATAACCTCTATCTAATTTCACTAGGTTCTTGTATTTTATGTTCCGATATTATGTTGGTAGGCCTCTTTTTGATATTCACCAGGTGTATTTTTCTTTTTCCTTTGAATCCCATTGTATGTACCATCTGAGTTCATGCCTCAGATTTTCATCAATACAATCTGTTTCCTTTTCAAAATAAATAAATAAAAATAAAGAAAGAAAAAGAAAAAGAGCGTTGTGTTCTATGTTTAAAGGTGCATAAAATGCTAGTTAACAACTGGTGTGCTTACCCTGTAGCTGTGTTTTGACAGGTGCTGGGTTGTCGTTCCTTGCGGGAGGTGCATTCGGTTGGACTTTTGGCCAAGAGATAGCAAATCATTGGTATCAACTCTACAGGCTGGACACAATGGCTGCACAAGTTAAGTTTATGGAGTGGTGGAGAAACAAGAGTGAGGGAAGTTCTTAAGACTCTGATTTGCAGTTGAAGCAGCGGAGCGCACACACTGCAGCTGCATCTAAAATAAAAATGTAAGTGCAACCTTGTTGAAATACAATGGTCGATTGGTTTGTGTTGTGATGAACTCTTCTTCCAACCTTTCAAGTTTAGAAAAGTACTGTCTCCTTTTTTATCTTCTGGAAATGACTCATTCATTTGCAAGCTCGTTAGAGAATGTACCCATCTTTACCAAATAACCCCAATTTTGGGTGGCTGTTAGGGTCTAAAGCATGTCCAAAATGGATACACATAGTTTTGTTGAAAGAATATTGGCTAAATTATATATAAATTGGATAACCTTGAAATGTGCTTAGGATAAAAAATAACTGCAAGGTTGCAATAATATGCTTGACCTTTTAAAAATGTTTTGAAACTATCCTTAGAGTAGAAGTTTGATTGAAAGAAACTGAAATTTGGAATGGTGTGGCAGAGATCTAGGATGAAAGTTGAGGCACTATTTCAGATCATTTTGACACAGTATCATATTTCAATTTTTGCTAAATATTCCAATGGCTGTCCA

mRNA sequence

AAACGAGCTTTGAAGAGCGAGATTGGAGAGCTAGAAGAGAGAACAGTTTTCAGGATTCTGATTTCAATCGGATTTAGCTTCTAAAATCTCAATCTTAATCTGTTTTTTGAGGGAGCAATCATGGAAGATTCGTCCTCTCAATCCTTCTTCAGGAAGCACTGGGAAGGCTACAAGGAGTTTTGGTCCGAGAGATTCTCAATTCTCGACAACTATAGCCCCTACGTCCAGCGCCCGACCCCTCTTCCTTCATGGTCTTCCTCCGATGTCGAGGAATTTATTGCTTCTGACCCCGTTCATGGCCCCGTTTTAAAGACTGCCAGAGAGGCTGTAAACTTTGGTCTCACAGGAAGTGTTATTGGAGCTGTATCGACTGCAGGTGTTGCATGGAAATACTCAAAAAGTTTACATGGTGCTGGGTTGTCGTTCCTTGCGGGAGGTGCATTCGGTTGGACTTTTGGCCAAGAGATAGCAAATCATTGGTATCAACTCTACAGGCTGGACACAATGGCTGCACAAGTTAAGTTTATGGAGTGGTGGAGAAACAAGAGTGAGGGAAGTTCTTAAGACTCTGATTTGCAGTTGAAGCAGCGGAGCGCACACACTGCAGCTGCATCTAAAATAAAAATGTAAGTGCAACCTTGTTGAAATACAATGGTCGATTGGTTTGTGTTGTGATGAACTCTTCTTCCAACCTTTCAAGTTTAGAAAAGTACTGTCTCCTTTTTTATCTTCTGGAAATGACTCATTCATTTGCAAGCTCGTTAGAGAATGTACCCATCTTTACCAAATAACCCCAATTTTGGGTGGCTGTTAGGGTCTAAAGCATGTCCAAAATGGATACACATAGTTTTGTTGAAAGAATATTGGCTAAATTATATATAAATTGGATAACCTTGAAATGTGCTTAGGATAAAAAATAACTGCAAGGTTGCAATAATATGCTTGACCTTTTAAAAATGTTTTGAAACTATCCTTAGAGTAGAAGTTTGATTGAAAGAAACTGAAATTTGGAATGGTGTGGCAGAGATCTAGGATGAAAGTTGAGGCACTATTTCAGATCATTTTGACACAGTATCATATTTCAATTTTTGCTAAATATTCCAATGGCTGTCCA

Coding sequence (CDS)

ATGGAAGATTCGTCCTCTCAATCCTTCTTCAGGAAGCACTGGGAAGGCTACAAGGAGTTTTGGTCCGAGAGATTCTCAATTCTCGACAACTATAGCCCCTACGTCCAGCGCCCGACCCCTCTTCCTTCATGGTCTTCCTCCGATGTCGAGGAATTTATTGCTTCTGACCCCGTTCATGGCCCCGTTTTAAAGACTGCCAGAGAGGCTGTAAACTTTGGTCTCACAGGAAGTGTTATTGGAGCTGTATCGACTGCAGGTGTTGCATGGAAATACTCAAAAAGTTTACATGGTGCTGGGTTGTCGTTCCTTGCGGGAGGTGCATTCGGTTGGACTTTTGGCCAAGAGATAGCAAATCATTGGTATCAACTCTACAGGCTGGACACAATGGCTGCACAAGTTAAGTTTATGGAGTGGTGGAGAAACAAGAGTGAGGGAAGTTCTTAA

Protein sequence

MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPYVQRPTPLPSWSSSDVEEFIASDPVHGPVLKTAREAVNFGLTGSVIGAVSTAGVAWKYSKSLHGAGLSFLAGGAFGWTFGQEIANHWYQLYRLDTMAAQVKFMEWWRNKSEGSS
Homology
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BLAST of IVF0015582 vs. ExPASy Swiss-Prot
Match: Q941A6 (Succinate dehydrogenase subunit 6, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SDH6 PE=1 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 5.4e-56
Identity = 100/139 (71.94%), Postives = 115/139 (82.73%), Query Frame = 0 

Query: 6   SQSFFRKHWEGYKEFWSERFSILDNYSPYVQRPTPLPSWSSSDVEEFIASDPVHGPVLKT 65
           S+SF  K+W G K+FWS+R S  +NY+ + +R  PLPSWSSSDVEEFIASDPVHGP LKT
Sbjct: 4   SESFVGKNWNGLKDFWSDRLSFFENYTRFTKRDAPLPSWSSSDVEEFIASDPVHGPTLKT 63

Query: 66  AREAVNFGLTGSVIGAVSTAGVAWKYSKSLHGAGLSFLAGGAFGWTFGQEIANHWYQLYR 125
           AREAV FG+TG+ +GAVSTA  AWKYS+S HGA LSFL GG FGWTFGQE+ANH  QLY+
Sbjct: 64  AREAVTFGVTGAALGAVSTAAFAWKYSRSPHGAALSFLGGGVFGWTFGQEVANHTLQLYK 123

Query: 126 LDTMAAQVKFMEWWRNKSE 145
           LDTMAAQVKFMEWW  KS+
Sbjct: 124 LDTMAAQVKFMEWWERKSQ 142

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BLAST of IVF0015582 vs. ExPASy Swiss-Prot
Match: Q6ZCC4 (Succinate dehydrogenase subunit 6, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=SDH6 PE=1 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 5.1e-30
Identity = 61/135 (45.19%), Postives = 83/135 (61.48%), Query Frame = 0 

Query: 12  KHWEGYKEFWSERFSILDNYSPYVQRPTPLPSWSSSDVEEFIASDPVHGPVLKTAREAVN 71
           +H EG K  W++ FS LD +     R  PLP W+ +DV+EFIASDPV+GP LK  RE+  
Sbjct: 5   EHVEGIKAHWAKNFSFLDYFKKVYGRDKPLPKWTDADVDEFIASDPVYGPQLKAMRESRK 64

Query: 72  FGLTGSVIGAVSTAGVAWKYSKSLHGAGLSFLAGGAFGWTFGQEIANHWYQLYRLDTMAA 131
           F L G+++G     G+A KYSK+ HG  L+   G   G   G E+A HWYQLY+ D   A
Sbjct: 65  FALGGALVGGAHLGGIALKYSKAPHGVVLATGFGAICGAVVGSEVAEHWYQLYKTDKQGA 124

Query: 132 QVKFMEWWRNKSEGS 147
            ++F+ WW +K  G+
Sbjct: 125 NLRFIYWWEDKVAGN 139

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BLAST of IVF0015582 vs. ExPASy TrEMBL
Match: A0A5D3DY28 (Succinate dehydrogenase subunit 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold289G00640 PE=4 SV=1)

HSP 1 Score: 307.4 bits (786), Expect = 3.3e-80
Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 0 

Query: 1   MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPYVQRPTPLPSWSSSDVEEFIASDPVHG 60
           MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPYVQRPTPLPSWSSSDVEEFIASDPVHG
Sbjct: 1   MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPYVQRPTPLPSWSSSDVEEFIASDPVHG 60

Query: 61  PVLKTAREAVNFGLTGSVIGAVSTAGVAWKYSKSLHGAGLSFLAGGAFGWTFGQEIANHW 120
           PVLKTAREAVNFGLTGSVIGAVSTAGVAWKYSKSLHGAGLSFLAGGAFGWTFGQEIANHW
Sbjct: 61  PVLKTAREAVNFGLTGSVIGAVSTAGVAWKYSKSLHGAGLSFLAGGAFGWTFGQEIANHW 120

Query: 121 YQLYRLDTMAAQVKFMEWWRNKSEGSS 148
           YQLYRLDTMAAQVKFMEWWRNKSEGSS
Sbjct: 121 YQLYRLDTMAAQVKFMEWWRNKSEGSS 147

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BLAST of IVF0015582 vs. ExPASy TrEMBL
Match: A0A1S3BP04 (succinate dehydrogenase subunit 6, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103491959 PE=4 SV=1)

HSP 1 Score: 307.4 bits (786), Expect = 3.3e-80
Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 0 

Query: 1   MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPYVQRPTPLPSWSSSDVEEFIASDPVHG 60
           MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPYVQRPTPLPSWSSSDVEEFIASDPVHG
Sbjct: 1   MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPYVQRPTPLPSWSSSDVEEFIASDPVHG 60

Query: 61  PVLKTAREAVNFGLTGSVIGAVSTAGVAWKYSKSLHGAGLSFLAGGAFGWTFGQEIANHW 120
           PVLKTAREAVNFGLTGSVIGAVSTAGVAWKYSKSLHGAGLSFLAGGAFGWTFGQEIANHW
Sbjct: 61  PVLKTAREAVNFGLTGSVIGAVSTAGVAWKYSKSLHGAGLSFLAGGAFGWTFGQEIANHW 120

Query: 121 YQLYRLDTMAAQVKFMEWWRNKSEGSS 148
           YQLYRLDTMAAQVKFMEWWRNKSEGSS
Sbjct: 121 YQLYRLDTMAAQVKFMEWWRNKSEGSS 147

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BLAST of IVF0015582 vs. ExPASy TrEMBL
Match: A0A6J1EGQ0 (succinate dehydrogenase subunit 6, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111434163 PE=4 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 9.2e-75
Identity = 136/145 (93.79%), Postives = 140/145 (96.55%), Query Frame = 0 

Query: 1   MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPYVQRPTPLPSWSSSDVEEFIASDPVHG 60
           MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSP+VQR  PLPSWS SDVEEFIASDPVHG
Sbjct: 1   MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPFVQREKPLPSWSDSDVEEFIASDPVHG 60

Query: 61  PVLKTAREAVNFGLTGSVIGAVSTAGVAWKYSKSLHGAGLSFLAGGAFGWTFGQEIANHW 120
           PVLKTAREAVNFGLTGS+IGAVSTAGVAWKYS+SLHGAGLSFLAGGAFGWTFG EIANHW
Sbjct: 61  PVLKTAREAVNFGLTGSLIGAVSTAGVAWKYSRSLHGAGLSFLAGGAFGWTFGHEIANHW 120

Query: 121 YQLYRLDTMAAQVKFMEWWRNKSEG 146
           YQLYR+DTM AQVKFMEWWRNKSEG
Sbjct: 121 YQLYRVDTMGAQVKFMEWWRNKSEG 145

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BLAST of IVF0015582 vs. ExPASy TrEMBL
Match: A0A6J1DK58 (succinate dehydrogenase subunit 6, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111020802 PE=4 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 2.1e-74
Identity = 135/145 (93.10%), Postives = 139/145 (95.86%), Query Frame = 0 

Query: 1   MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPYVQRPTPLPSWSSSDVEEFIASDPVHG 60
           MEDSSSQSFFRKHWEGYKEFWSERFSILDNY+PYVQR  PLPSWSSSDVE FIASDPVHG
Sbjct: 1   MEDSSSQSFFRKHWEGYKEFWSERFSILDNYAPYVQREKPLPSWSSSDVEAFIASDPVHG 60

Query: 61  PVLKTAREAVNFGLTGSVIGAVSTAGVAWKYSKSLHGAGLSFLAGGAFGWTFGQEIANHW 120
           P LKTAREAVNFGLTGSVIGAVSTAGVAWKYS+SLHGAGLSFLAGG FGWTFG E+ANHW
Sbjct: 61  PTLKTAREAVNFGLTGSVIGAVSTAGVAWKYSRSLHGAGLSFLAGGVFGWTFGHEVANHW 120

Query: 121 YQLYRLDTMAAQVKFMEWWRNKSEG 146
           YQLYRLDTMAAQVKFMEWWRNK+EG
Sbjct: 121 YQLYRLDTMAAQVKFMEWWRNKNEG 145

[Close]
BLAST of IVF0015582 vs. ExPASy TrEMBL
Match: A0A6J1HQ77 (succinate dehydrogenase subunit 6, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111465621 PE=4 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 4.6e-74
Identity = 135/144 (93.75%), Postives = 139/144 (96.53%), Query Frame = 0 

Query: 1   MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPYVQRPTPLPSWSSSDVEEFIASDPVHG 60
           MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSP+VQR  PLPSWS SDVEEFIASDPVHG
Sbjct: 1   MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPFVQREKPLPSWSDSDVEEFIASDPVHG 60

Query: 61  PVLKTAREAVNFGLTGSVIGAVSTAGVAWKYSKSLHGAGLSFLAGGAFGWTFGQEIANHW 120
           PVLKTAREAVNFGLTGS+IGAVSTAGVAWKYS+SLHGAGLSFLAGGAFGWTFG EIANHW
Sbjct: 61  PVLKTAREAVNFGLTGSLIGAVSTAGVAWKYSRSLHGAGLSFLAGGAFGWTFGHEIANHW 120

Query: 121 YQLYRLDTMAAQVKFMEWWRNKSE 145
           YQLYR+DTM AQVKFMEWWRNKSE
Sbjct: 121 YQLYRVDTMGAQVKFMEWWRNKSE 144

[Close]
BLAST of IVF0015582 vs. NCBI nr
Match: XP_008450314.1 (PREDICTED: succinate dehydrogenase subunit 6, mitochondrial [Cucumis melo] >KAA0055944.1 succinate dehydrogenase subunit 6 [Cucumis melo var. makuwa] >TYK28150.1 succinate dehydrogenase subunit 6 [Cucumis melo var. makuwa])

HSP 1 Score: 308 bits (788), Expect = 9.15e-106
Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 0 

Query: 1   MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPYVQRPTPLPSWSSSDVEEFIASDPVHG 60
           MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPYVQRPTPLPSWSSSDVEEFIASDPVHG
Sbjct: 1   MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPYVQRPTPLPSWSSSDVEEFIASDPVHG 60

Query: 61  PVLKTAREAVNFGLTGSVIGAVSTAGVAWKYSKSLHGAGLSFLAGGAFGWTFGQEIANHW 120
           PVLKTAREAVNFGLTGSVIGAVSTAGVAWKYSKSLHGAGLSFLAGGAFGWTFGQEIANHW
Sbjct: 61  PVLKTAREAVNFGLTGSVIGAVSTAGVAWKYSKSLHGAGLSFLAGGAFGWTFGQEIANHW 120

Query: 121 YQLYRLDTMAAQVKFMEWWRNKSEGSS 147
           YQLYRLDTMAAQVKFMEWWRNKSEGSS
Sbjct: 121 YQLYRLDTMAAQVKFMEWWRNKSEGSS 147

[Close]
BLAST of IVF0015582 vs. NCBI nr
Match: XP_011660175.1 (succinate dehydrogenase subunit 6, mitochondrial [Cucumis sativus] >KAE8653538.1 hypothetical protein Csa_007645 [Cucumis sativus])

HSP 1 Score: 300 bits (767), Expect = 1.46e-102
Identity = 142/147 (96.60%), Postives = 145/147 (98.64%), Query Frame = 0 

Query: 1   MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPYVQRPTPLPSWSSSDVEEFIASDPVHG 60
           MEDSSSQSFFRKHWEGYKEFWS+RFSILDNYSPYVQR TPLPSWSSSDVEEFIASDPVHG
Sbjct: 1   MEDSSSQSFFRKHWEGYKEFWSDRFSILDNYSPYVQRQTPLPSWSSSDVEEFIASDPVHG 60

Query: 61  PVLKTAREAVNFGLTGSVIGAVSTAGVAWKYSKSLHGAGLSFLAGGAFGWTFGQEIANHW 120
           PVLKTAREAVNFGLTGSVIGAVSTAGVAWKYS+SLHGAGLSFLAGG FGWTFGQEIANHW
Sbjct: 61  PVLKTAREAVNFGLTGSVIGAVSTAGVAWKYSRSLHGAGLSFLAGGVFGWTFGQEIANHW 120

Query: 121 YQLYRLDTMAAQVKFMEWWRNKSEGSS 147
           YQLYR+DTMAAQVKFMEWWRNKSEGSS
Sbjct: 121 YQLYRVDTMAAQVKFMEWWRNKSEGSS 147

[Close]
BLAST of IVF0015582 vs. NCBI nr
Match: XP_022927277.1 (succinate dehydrogenase subunit 6, mitochondrial-like [Cucurbita moschata] >XP_023531100.1 succinate dehydrogenase subunit 6, mitochondrial-like [Cucurbita pepo subsp. pepo] >KAG6588233.1 Succinate dehydrogenase subunit 6, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia] >KAG7022147.1 Succinate dehydrogenase subunit 6, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 289 bits (740), Expect = 1.92e-98
Identity = 136/145 (93.79%), Postives = 140/145 (96.55%), Query Frame = 0 

Query: 1   MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPYVQRPTPLPSWSSSDVEEFIASDPVHG 60
           MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSP+VQR  PLPSWS SDVEEFIASDPVHG
Sbjct: 1   MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPFVQREKPLPSWSDSDVEEFIASDPVHG 60

Query: 61  PVLKTAREAVNFGLTGSVIGAVSTAGVAWKYSKSLHGAGLSFLAGGAFGWTFGQEIANHW 120
           PVLKTAREAVNFGLTGS+IGAVSTAGVAWKYS+SLHGAGLSFLAGGAFGWTFG EIANHW
Sbjct: 61  PVLKTAREAVNFGLTGSLIGAVSTAGVAWKYSRSLHGAGLSFLAGGAFGWTFGHEIANHW 120

Query: 121 YQLYRLDTMAAQVKFMEWWRNKSEG 145
           YQLYR+DTM AQVKFMEWWRNKSEG
Sbjct: 121 YQLYRVDTMGAQVKFMEWWRNKSEG 145

[Close]
BLAST of IVF0015582 vs. NCBI nr
Match: XP_022153276.1 (succinate dehydrogenase subunit 6, mitochondrial [Momordica charantia])

HSP 1 Score: 288 bits (737), Expect = 5.51e-98
Identity = 135/145 (93.10%), Postives = 139/145 (95.86%), Query Frame = 0 

Query: 1   MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPYVQRPTPLPSWSSSDVEEFIASDPVHG 60
           MEDSSSQSFFRKHWEGYKEFWSERFSILDNY+PYVQR  PLPSWSSSDVE FIASDPVHG
Sbjct: 1   MEDSSSQSFFRKHWEGYKEFWSERFSILDNYAPYVQREKPLPSWSSSDVEAFIASDPVHG 60

Query: 61  PVLKTAREAVNFGLTGSVIGAVSTAGVAWKYSKSLHGAGLSFLAGGAFGWTFGQEIANHW 120
           P LKTAREAVNFGLTGSVIGAVSTAGVAWKYS+SLHGAGLSFLAGG FGWTFG E+ANHW
Sbjct: 61  PTLKTAREAVNFGLTGSVIGAVSTAGVAWKYSRSLHGAGLSFLAGGVFGWTFGHEVANHW 120

Query: 121 YQLYRLDTMAAQVKFMEWWRNKSEG 145
           YQLYRLDTMAAQVKFMEWWRNK+EG
Sbjct: 121 YQLYRLDTMAAQVKFMEWWRNKNEG 145

[Close]
BLAST of IVF0015582 vs. NCBI nr
Match: XP_022965868.1 (succinate dehydrogenase subunit 6, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 287 bits (734), Expect = 1.43e-97
Identity = 135/144 (93.75%), Postives = 139/144 (96.53%), Query Frame = 0 

Query: 1   MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPYVQRPTPLPSWSSSDVEEFIASDPVHG 60
           MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSP+VQR  PLPSWS SDVEEFIASDPVHG
Sbjct: 1   MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPFVQREKPLPSWSDSDVEEFIASDPVHG 60

Query: 61  PVLKTAREAVNFGLTGSVIGAVSTAGVAWKYSKSLHGAGLSFLAGGAFGWTFGQEIANHW 120
           PVLKTAREAVNFGLTGS+IGAVSTAGVAWKYS+SLHGAGLSFLAGGAFGWTFG EIANHW
Sbjct: 61  PVLKTAREAVNFGLTGSLIGAVSTAGVAWKYSRSLHGAGLSFLAGGAFGWTFGHEIANHW 120

Query: 121 YQLYRLDTMAAQVKFMEWWRNKSE 144
           YQLYR+DTM AQVKFMEWWRNKSE
Sbjct: 121 YQLYRVDTMGAQVKFMEWWRNKSE 144

[Close]
BLAST of IVF0015582 vs. TAIR 10
Match: AT1G08480.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, plasma membrane, plastid, vacuole; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; Has 39 Blast hits to 39 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 218.4 bits (555), Expect = 3.8e-57
Identity = 100/139 (71.94%), Postives = 115/139 (82.73%), Query Frame = 0 

Query: 6   SQSFFRKHWEGYKEFWSERFSILDNYSPYVQRPTPLPSWSSSDVEEFIASDPVHGPVLKT 65
           S+SF  K+W G K+FWS+R S  +NY+ + +R  PLPSWSSSDVEEFIASDPVHGP LKT
Sbjct: 4   SESFVGKNWNGLKDFWSDRLSFFENYTRFTKRDAPLPSWSSSDVEEFIASDPVHGPTLKT 63

Query: 66  AREAVNFGLTGSVIGAVSTAGVAWKYSKSLHGAGLSFLAGGAFGWTFGQEIANHWYQLYR 125
           AREAV FG+TG+ +GAVSTA  AWKYS+S HGA LSFL GG FGWTFGQE+ANH  QLY+
Sbjct: 64  AREAVTFGVTGAALGAVSTAAFAWKYSRSPHGAALSFLGGGVFGWTFGQEVANHTLQLYK 123

Query: 126 LDTMAAQVKFMEWWRNKSE 145
           LDTMAAQVKFMEWW  KS+
Sbjct: 124 LDTMAAQVKFMEWWERKSQ 142

The following BLAST results are available for this feature:
BLAST of IVF0015582 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q941A65.4e-5671.94Succinate dehydrogenase subunit 6, mitochondrial OS=Arabidopsis thaliana OX=3702... [more]
Q6ZCC45.1e-3045.19Succinate dehydrogenase subunit 6, mitochondrial OS=Oryza sativa subsp. japonica... [more]
BLAST of IVF0015582 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3DY283.3e-80100.00Succinate dehydrogenase subunit 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A1S3BP043.3e-80100.00succinate dehydrogenase subunit 6, mitochondrial OS=Cucumis melo OX=3656 GN=LOC1... [more]
A0A6J1EGQ09.2e-7593.79succinate dehydrogenase subunit 6, mitochondrial-like OS=Cucurbita moschata OX=3... [more]
A0A6J1DK582.1e-7493.10succinate dehydrogenase subunit 6, mitochondrial OS=Momordica charantia OX=3673 ... [more]
A0A6J1HQ774.6e-7493.75succinate dehydrogenase subunit 6, mitochondrial-like OS=Cucurbita maxima OX=366... [more]
BLAST of IVF0015582 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008450314.19.15e-106100.00PREDICTED: succinate dehydrogenase subunit 6, mitochondrial [Cucumis melo] >KAA0... [more]
XP_011660175.11.46e-10296.60succinate dehydrogenase subunit 6, mitochondrial [Cucumis sativus] >KAE8653538.1... [more]
XP_022927277.11.92e-9893.79succinate dehydrogenase subunit 6, mitochondrial-like [Cucurbita moschata] >XP_0... [more]
XP_022153276.15.51e-9893.10succinate dehydrogenase subunit 6, mitochondrial [Momordica charantia][more]
XP_022965868.11.43e-9793.75succinate dehydrogenase subunit 6, mitochondrial-like [Cucurbita maxima][more]
BLAST of IVF0015582 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G08480.13.8e-5771.94unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR034574Succinate dehydrogenase subunit 6, mitochondrialPANTHERPTHR36708SUCCINATE DEHYDROGENASE SUBUNIT 6, MITOCHONDRIALcoord: 3..145
NoneNo IPR availablePANTHERPTHR36708:SF2SUCCINATE DEHYDROGENASE SUBUNIT 6, MITOCHONDRIAL-LIKEcoord: 3..145

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0015582.2IVF0015582.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005749 mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)
molecular_function GO:0043495 protein-membrane adaptor activity