IVF0015557 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTTGGTGCTTCCAAACCAGCCTCATGCTCTTTCGAGAAAAGTTATCTCAGGAAAATATAAAGCTTCCTATGCTGGAGAAATCCCCTATAAAAGTAAACACAACAGCTCTAGAGCTCCTTGGTTCTCCATAAAAAGGGACTGAACTGGTTCAAGAGGAACTACAAGTGGGAGGTCAACAATGGCGAAAATCTATGCTTCTTGTATAAAAATTGGACTAACAGGGACCCACTTTTCAAAGCTTTTCCTAAAACGTTTGCCTTAGCCATTGACAAAAATGCAACCATAAAAGATAGATGGGATTATGCTCGTAAGGCGTGGACTTTGGACTTCATAAGAACTTTGAATGAAAGGGAAACAAACACATGGAACTACATTAAAGGTGATTCAATTTTCTCTACCAGAAAAAGGATGCAGCAAGCCAATATGGAATCTCAACAGTGA ATGGCTTTGGTGCTTCCAAACCAGCCTCATGCTCTTTCGAGAAAAGTTATCTCAGGAAAATATAAAGCTTCCTATGCTGGAGAAATCCCCTATAAAAGTAAACACAACAGCTCTAGAGCTCCTTGGAACTACAAGTGGGAGGTCAACAATGGCGAAAATCTATGCTTCTTGTATAAAAATTGGACTAACAGGGACCCACTTTTCAAAGCTTTTCCTAAAACGTTTGCCTTAGCCATTGACAAAAATGCAACCATAAAAGATAGATGGGATTATGCTCGTAAGGCGTGGACTTTGGACTTCATAAGAACTTTGAATGAAAGGGAAACAAACACATGGAACTACATTAAAGGTGATTCAATTTTCTCTACCAGAAAAAGGATGCAGCAAGCCAATATGGAATCTCAACAGTGA ATGGCTTTGGTGCTTCCAAACCAGCCTCATGCTCTTTCGAGAAAAGTTATCTCAGGAAAATATAAAGCTTCCTATGCTGGAGAAATCCCCTATAAAAGTAAACACAACAGCTCTAGAGCTCCTTGGAACTACAAGTGGGAGGTCAACAATGGCGAAAATCTATGCTTCTTGTATAAAAATTGGACTAACAGGGACCCACTTTTCAAAGCTTTTCCTAAAACGTTTGCCTTAGCCATTGACAAAAATGCAACCATAAAAGATAGATGGGATTATGCTCGTAAGGCGTGGACTTTGGACTTCATAAGAACTTTGAATGAAAGGGAAACAAACACATGGAACTACATTAAAGGTGATTCAATTTTCTCTACCAGAAAAAGGATGCAGCAAGCCAATATGGAATCTCAACAGTGA MALVLPNQPHALSRKVISGKYKASYAGEIPYKSKHNSSRAPWNYKWEVNNGENLCFLYKNWTNRDPLFKAFPKTFALAIDKNATIKDRWDYARKAWTLDFIRTLNERETNTWNYIKGDSIFSTRKRMQQANMESQQ Homology
BLAST of IVF0015557 vs. ExPASy TrEMBL
Match: A0A5D3CYF8 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold96G001020 PE=4 SV=1) HSP 1 Score: 279.3 bits (713), Expect = 8.8e-72 Identity = 136/148 (91.89%), Postives = 136/148 (91.89%), Query Frame = 0
BLAST of IVF0015557 vs. ExPASy TrEMBL
Match: A0A5D3D793 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold443G00540 PE=4 SV=1) HSP 1 Score: 150.6 bits (379), Expect = 4.7e-33 Identity = 77/131 (58.78%), Postives = 89/131 (67.94%), Query Frame = 0
BLAST of IVF0015557 vs. ExPASy TrEMBL
Match: A0A5A7TTK1 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold216G00450 PE=4 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 5.1e-19 Identity = 47/118 (39.83%), Postives = 69/118 (58.47%), Query Frame = 0
BLAST of IVF0015557 vs. ExPASy TrEMBL
Match: A0A5A7UTS4 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3840G00080 PE=4 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 3.3e-18 Identity = 46/121 (38.02%), Postives = 72/121 (59.50%), Query Frame = 0
BLAST of IVF0015557 vs. ExPASy TrEMBL
Match: A0A5A7UV84 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold98G001710 PE=4 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 5.6e-18 Identity = 45/121 (37.19%), Postives = 69/121 (57.02%), Query Frame = 0
BLAST of IVF0015557 vs. NCBI nr
Match: KAA0032006.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] >TYK16827.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]) HSP 1 Score: 278 bits (710), Expect = 4.76e-94 Identity = 136/148 (91.89%), Postives = 136/148 (91.89%), Query Frame = 0
BLAST of IVF0015557 vs. NCBI nr
Match: TYK19414.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]) HSP 1 Score: 149 bits (376), Expect = 2.07e-42 Identity = 76/127 (59.84%), Postives = 88/127 (69.29%), Query Frame = 0
BLAST of IVF0015557 vs. NCBI nr
Match: KAA0046762.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]) HSP 1 Score: 102 bits (255), Expect = 2.68e-22 Identity = 47/118 (39.83%), Postives = 69/118 (58.47%), Query Frame = 0
BLAST of IVF0015557 vs. NCBI nr
Match: KAA0058554.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] >TYK01631.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]) HSP 1 Score: 100 bits (248), Expect = 2.34e-21 Identity = 46/121 (38.02%), Postives = 72/121 (59.50%), Query Frame = 0
BLAST of IVF0015557 vs. NCBI nr
Match: TYK11012.1 (uncharacterized protein E5676_scaffold874G00540 [Cucumis melo var. makuwa]) HSP 1 Score: 99.4 bits (246), Expect = 4.50e-21 Identity = 45/121 (37.19%), Postives = 69/121 (57.02%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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