IVF0015468 (gene) Melon (IVF77) v1

Overview
NameIVF0015468
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionDihydrolipoyllysine-residue succinyltransferase
Locationchr10: 5327452 .. 5327744 (+)
RNA-Seq ExpressionIVF0015468
SyntenyIVF0015468
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTTTTGAAGTCGCAAGACGACGGATTGTGTCTAGAGGCTCTAATCTGGTAAGGTTTAGAAGACTCTATTCATTTTCTTTTGGCGTATGTGATGTATATACAAATTTGTATCGGTATGTGGAATTTGTCTGATGTTTGTAATGCTTTCATTTTAGTTTTTTGTGCAATATTTGCAGGGCATTCGACCTTCCATTTCTGCAGTAGGAGTCTGTTCTAATGCTAAGAAAGAGGTAGTTGCATTTTCTGAAGTTTTGCTCTCCTTGTGTGCTTTGTCTGAAGATGGTTTTTAG

mRNA sequence

ATGAGTTTTGAAGTCGCAAGACGACGGATTGTGTCTAGAGGCTCTAATCTGTTTTTTGTGCAATATTTGCAGGGCATTCGACCTTCCATTTCTGCAGTAGGAGTCTGTTCTAATGCTAAGAAAGAGGTAGTTGCATTTTCTGAAGTTTTGCTCTCCTTGTGTGCTTTGTCTGAAGATGGTTTTTAG

Coding sequence (CDS)

ATGAGTTTTGAAGTCGCAAGACGACGGATTGTGTCTAGAGGCTCTAATCTGTTTTTTGTGCAATATTTGCAGGGCATTCGACCTTCCATTTCTGCAGTAGGAGTCTGTTCTAATGCTAAGAAAGAGGTAGTTGCATTTTCTGAAGTTTTGCTCTCCTTGTGTGCTTTGTCTGAAGATGGTTTTTAG

Protein sequence

MSFEVARRRIVSRGSNLFFVQYLQGIRPSISAVGVCSNAKKEVVAFSEVLLSLCALSEDGF
Homology
[Close]
BLAST of IVF0015468 vs. ExPASy TrEMBL
Match: A0A0A0K780 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G212630 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 4.9e-14
Identity = 48/61 (78.69%), Postives = 50/61 (81.97%), Query Frame = 0 

Query: 1  MSFEVARRRIVSRGSNLFFVQYLQGIRPSISAVGVCSNAKKEVVAFSEVLLSLCALSEDG 60
          MSF V RRRI S GSNLF  QYL+GIRPSISA  V S A+KEVVAFSEVLLSLCALS DG
Sbjct: 1  MSFGVVRRRIASGGSNLFSAQYLRGIRPSISAGRVRSVAEKEVVAFSEVLLSLCALSGDG 60

Query: 61 F 62
          F
Sbjct: 61 F 61

[Close]
BLAST of IVF0015468 vs. ExPASy TrEMBL
Match: A0A5A7SHN5 (Dihydrolipoyllysine-residue succinyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold124G00450 PE=3 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 2.4e-05
Identity = 31/44 (70.45%), Postives = 34/44 (77.27%), Query Frame = 0 

Query: 1  MSFEVARRRIVSRGSNLFFVQYLQGIRPSISAVGVCSNAKKEVV 45
          MSF V RRRI S GSNLF  QYLQGIRPSISA  V S A+KE++
Sbjct: 1  MSFGVVRRRIASGGSNLFSAQYLQGIRPSISAGRVRSVAEKEIL 44

[Close]
BLAST of IVF0015468 vs. ExPASy TrEMBL
Match: A0A5D3DHP6 (Dihydrolipoyllysine-residue succinyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G00850 PE=3 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 2.4e-05
Identity = 31/44 (70.45%), Postives = 34/44 (77.27%), Query Frame = 0 

Query: 1  MSFEVARRRIVSRGSNLFFVQYLQGIRPSISAVGVCSNAKKEVV 45
          MSF V RRRI S GSNLF  QYLQGIRPSISA  V S A+KE++
Sbjct: 1  MSFGVVRRRIASGGSNLFSAQYLQGIRPSISAGRVRSVAEKEIL 44

[Close]
BLAST of IVF0015468 vs. ExPASy TrEMBL
Match: A0A1S3BHH7 (Dihydrolipoyllysine-residue succinyltransferase OS=Cucumis melo OX=3656 GN=LOC103490134 PE=3 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 2.4e-05
Identity = 31/44 (70.45%), Postives = 34/44 (77.27%), Query Frame = 0 

Query: 1  MSFEVARRRIVSRGSNLFFVQYLQGIRPSISAVGVCSNAKKEVV 45
          MSF V RRRI S GSNLF  QYLQGIRPSISA  V S A+KE++
Sbjct: 1  MSFGVVRRRIASGGSNLFSAQYLQGIRPSISAGRVRSVAEKEIL 44

[Close]
BLAST of IVF0015468 vs. ExPASy TrEMBL
Match: A0A6J1IE26 (Dihydrolipoyllysine-residue succinyltransferase OS=Cucurbita maxima OX=3661 GN=LOC111476401 PE=3 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 7.1e-05
Identity = 30/44 (68.18%), Postives = 34/44 (77.27%), Query Frame = 0 

Query: 1  MSFEVARRRIVSRGSNLFFVQYLQGIRPSISAVGVCSNAKKEVV 45
          MSF V RRRI S GSNLF  QYL+GIRPSISA  V S A+KE++
Sbjct: 1  MSFGVVRRRIASGGSNLFSAQYLRGIRPSISAGRVRSVAEKEIL 44

[Close]
BLAST of IVF0015468 vs. NCBI nr
Match: KAG6585877.1 (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 63.9 bits (154), Expect = 6.32e-10
Identity = 37/60 (61.67%), Postives = 42/60 (70.00%), Query Frame = 0 

Query: 1   MSFEVARRRIVSRGSNLFFVQYLQGIRPSISAVGVCSNAKKEVVAFSEVLLSLCALSEDG 60
           MSF V RRRI S GSNL    YL+ IRPSISA  V + A+KEVV FS+V +SLC LS  G
Sbjct: 75  MSFGVVRRRIASGGSNL----YLRAIRPSISAGRVRTVAEKEVVTFSDVFVSLCTLSGGG 130

[Close]
BLAST of IVF0015468 vs. NCBI nr
Match: KAG6607794.1 (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 63.9 bits (154), Expect = 6.34e-10
Identity = 37/60 (61.67%), Postives = 42/60 (70.00%), Query Frame = 0 

Query: 1   MSFEVARRRIVSRGSNLFFVQYLQGIRPSISAVGVCSNAKKEVVAFSEVLLSLCALSEDG 60
           MSF V RRRI S GSNL    YL+ IRPSISA  V + A+KEVV FS+V +SLC LS  G
Sbjct: 75  MSFGVVRRRIASGGSNL----YLRAIRPSISAGRVRTVAEKEVVTFSDVFVSLCTLSGGG 130

[Close]
BLAST of IVF0015468 vs. NCBI nr
Match: KAA0025144.1 (dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex 1 [Cucumis melo var. makuwa])

HSP 1 Score: 58.5 bits (140), Expect = 5.03e-08
Identity = 31/44 (70.45%), Postives = 34/44 (77.27%), Query Frame = 0 

Query: 1  MSFEVARRRIVSRGSNLFFVQYLQGIRPSISAVGVCSNAKKEVV 44
          MSF V RRRI S GSNLF  QYLQGIRPSISA  V S A+KE++
Sbjct: 1  MSFGVVRRRIASGGSNLFSAQYLQGIRPSISAGRVRSVAEKEIL 44

[Close]
BLAST of IVF0015468 vs. NCBI nr
Match: XP_008447731.1 (PREDICTED: dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex 1, mitochondrial [Cucumis melo])

HSP 1 Score: 58.5 bits (140), Expect = 5.03e-08
Identity = 31/44 (70.45%), Postives = 34/44 (77.27%), Query Frame = 0 

Query: 1  MSFEVARRRIVSRGSNLFFVQYLQGIRPSISAVGVCSNAKKEVV 44
          MSF V RRRI S GSNLF  QYLQGIRPSISA  V S A+KE++
Sbjct: 1  MSFGVVRRRIASGGSNLFSAQYLQGIRPSISAGRVRSVAEKEIL 44

[Close]
BLAST of IVF0015468 vs. NCBI nr
Match: TYK23103.1 (dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex 1 [Cucumis melo var. makuwa])

HSP 1 Score: 58.5 bits (140), Expect = 5.03e-08
Identity = 31/44 (70.45%), Postives = 34/44 (77.27%), Query Frame = 0 

Query: 1  MSFEVARRRIVSRGSNLFFVQYLQGIRPSISAVGVCSNAKKEVV 44
          MSF V RRRI S GSNLF  QYLQGIRPSISA  V S A+KE++
Sbjct: 1  MSFGVVRRRIASGGSNLFSAQYLQGIRPSISAGRVRSVAEKEIL 44

The following BLAST results are available for this feature:
BLAST of IVF0015468 vs.
Match NameE-valueIdentityDescription
BLAST of IVF0015468 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K7804.9e-1478.69Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G212630 PE=4 SV=1[more]
A0A5A7SHN52.4e-0570.45Dihydrolipoyllysine-residue succinyltransferase OS=Cucumis melo var. makuwa OX=1... [more]
A0A5D3DHP62.4e-0570.45Dihydrolipoyllysine-residue succinyltransferase OS=Cucumis melo var. makuwa OX=1... [more]
A0A1S3BHH72.4e-0570.45Dihydrolipoyllysine-residue succinyltransferase OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A6J1IE267.1e-0568.18Dihydrolipoyllysine-residue succinyltransferase OS=Cucurbita maxima OX=3661 GN=L... [more]
BLAST of IVF0015468 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6585877.16.32e-1061.67Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehy... [more]
KAG6607794.16.34e-1061.67Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehy... [more]
KAA0025144.15.03e-0870.45dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehy... [more]
XP_008447731.15.03e-0870.45PREDICTED: dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglu... [more]
TYK23103.15.03e-0870.45dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehy... [more]
BLAST of IVF0015468 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0015468.1IVF0015468.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0044237 cellular metabolic process
biological_process GO:0044238 primary metabolic process
molecular_function GO:0016746 acyltransferase activity