IVF0015401 (gene) Melon (IVF77) v1

Overview


Name	IVF0015401
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	40S ribosomal protein S10-1-like
Location	chr07: 20193083 .. 20195425 (+)
RNA-Seq Expression	IVF0015401
Synteny	IVF0015401

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGGCTGCTCACTCCCTCTCTTTTTACACCTTCTCCTTCTCCTTCTCCGTCCCTCTTCCCTTTTCTGCTACTATCTTCAGCACTTGCTGAGCTTCAACCATGGTACATCTCTTCTTCTTCTTGAACTCGTTTCCTCTATAATTGTCTCTAATTTGTGCTTGTTTCTGTTTTCTGGGTCATAGAGTAATGAGGTATTTGAAAAGGAATCGATCTGGGGGTGGGAATTGCTACCCTTTTGTGTATTTTTGGATTGCTGTAGTGGGTCAAGTTTTATTTCGTATGAGATGGGGATGCTAGGGATTATTGTTTGGTTTCTCGTATTCATTTGATTCTTTTCTTCAGATTATTTCAGAAAAGAACCGTAGGGAAATCTCCAAATATCTCTTTCAAGGTATAACCAAACTCAAACCAATCTCAATCTAGTGTTTTTTTTTCCTTTCCAATTTTCTGATTTGAGTATTTTCCCTGATTTTATTTGTTCGTTGCTGTTTTAATCTCAGAGGGGGTTTGCTATGCCAAGAAGGATTACAATTTGGCCAAGCACCCAGAAATCGACGTGCCTAACTTGCAGGTTATTAAGTTGATGCAGAGCTTCAAGTCCAAGGAATATGTGCGCGAGACATTTGCTTGGATGCATTACTACTGGTACCTCACCAATGATGGCATTGAGTTCCTTAGGACTTACCTCAATCTCCCTTCTGAAATTGTCCCTGCTACCTTGAAGAAACAAGCTAAGCCCGCTGGTAGGCCCTTTGGCGGACCACCTGGCGATCGCCCACGGTATAAATTATATCTATTGTGCATTCGAGTGGTTAATTTAGAAATTGATGTGTATTTATAATGTATCATATATAAGGGCAAGGGCATATTTGAGTAGCTTTTCGTGTAATTGCATTTTTTTTTATTTAGTAAGTTATATTGATTCTCGTTAGTTTGTGTAATTGCAAATTTTGTTATTATTTAGTAAGTTATAATGATTCTCGTTAGCAGTCTTATTGATTTGTGGTATCTCTTATGAATTAGGGGTCCACCTCGTTTTGAGGGTGGTGAGAGGAGGTTTGGTGACCGTGATGGTTACCGTGGAGGTCCTCGTGGACCCGGCGGTGAGTTTGGTGGCGACAAAGGAGGAGCCCCTGCAGATTACAGGCCTTCGTTTGGGGTAATTTTTATACAATCTTCATATTGGATTCTGTAATGTGGTTGATATGCAACGATGCAATCATTGTTCATGTATCTAATTAGAATTTTATTAAGTTTACGGCCTTGTTCAGTGAGATGGTTAAGCTATTCGCTCCTGAGTTGATTGAATGACATCTCATAGTCATAGATTAGTCTCTTCATCTTTGATACTTTCCTCCAAAAGTGCTTCCTAATGAACTCGTCTTCTAATAACCTAGTTTAAGTGTTTCATAGTAGGCCTTTTTTTTTTGGCACTTGCATGCCATGGTCTCTGTTCACTTGCAACCTAATTGTTTTCTAGGGCCCATGTGATTACTGATTTGGTTAGGCATATTTAAACCATTTACTATTTAGGTATTAGGTGAGCATGAGCCATGGAGGGTTGTGGCTTAATTTAGATTTTTTTCAAGGATAACAGTGATAGAAAAATGGGTTGTTGAAATATTAGAAATGTCATAAGATTTGGAACTTTTATGTCCCATGTGGTATGTCATCCTTGTGCAAAATGATATTCTGATTAAGATATTTTATGGTTGATGATGAAGTCATTTTGAATGAATTTGAATTTTATGATAGTCATTGATGTGTGCTCTAGATGAAAGTTCGTTTATTTATAAAAGAAGCTTGTAATAGTCGTTTGTTAATTGTTTATTGATTGCTGTGTCATACCTGAAAATTTCTCAGGGTCCTGGTGGAAGGCCAGGTTTCGGCCGTGGAGCTGGTGGCTATGGCGGAGGAGCTGCACCAAGCTCAAACCTTCCTTGAAAAGTATGGTCATACAAGCAGTTCAATGAATTTTCAGTGGAACGAGTTAGCAGCTTGAGTGGAGAGTTTGTTAGCTTTTTTTCCCCCTTTTATTTAGCTTATGGGAATCTTATAAATTCAAATTTTCATTGTGCAAATTGAAGTTTACAAGTACTGTTTTGCAAGTATAAATTTTGTTCTTCTCTTCGAGCGCCGCCTAATTATCATTTGTACCATTTTAGCAAGGTTGAAATTTTAATGTTTTGAAGTCTGATTGTCTTGGGAAAAAGGGAACAAGCATTTTAATCAAATTCTTCTAAATATATTGAACTACTTTCTTCCATATGTTCCTTTTCTTTTTACCCGAGGATGCATCTGGCATAGTCTATGTAAAGGTGAGATTTATAAATTCTATTTGGCC

mRNA sequence

CGGCTGCTCACTCCCTCTCTTTTTACACCTTCTCCTTCTCCTTCTCCGTCCCTCTTCCCTTTTCTGCTACTATCTTCAGCACTTGCTGAGCTTCAACCATGATTATTTCAGAAAAGAACCGTAGGGAAATCTCCAAATATCTCTTTCAAGAGGGGGTTTGCTATGCCAAGAAGGATTACAATTTGGCCAAGCACCCAGAAATCGACGTGCCTAACTTGCAGGTTATTAAGTTGATGCAGAGCTTCAAGTCCAAGGAATATGTGCGCGAGACATTTGCTTGGATGCATTACTACTGGTACCTCACCAATGATGGCATTGAGTTCCTTAGGACTTACCTCAATCTCCCTTCTGAAATTGTCCCTGCTACCTTGAAGAAACAAGCTAAGCCCGCTGGTAGGCCCTTTGGCGGACCACCTGGCGATCGCCCACGGGGTCCACCTCGTTTTGAGGGTGGTGAGAGGAGGTTTGGTGACCGTGATGGTTACCGTGGAGGTCCTCGTGGACCCGGCGGTGAGTTTGGTGGCGACAAAGGAGGAGCCCCTGCAGATTACAGGCCTTCGTTTGGGGGTCCTGGTGGAAGGCCAGGTTTCGGCCGTGGAGCTGGTGGCTATGGCGGAGGAGCTGCACCAAGCTCAAACCTTCCTTGAAAAGTATGGTCATACAAGCAGTTCAATGAATTTTCAGTGGAACGAGTTAGCAGCTTGAGTGGAGAGTTTGTTAGCTTTTTTTCCCCCTTTTATTTAGCTTATGGGAATCTTATAAATTCAAATTTTCATTGTGCAAATTGAAGTTTACAAGTACTGTTTTGCAAGTATAAATTTTGTTCTTCTCTTCGAGCGCCGCCTAATTATCATTTGTACCATTTTAGCAAGGTTGAAATTTTAATGTTTTGAAGTCTGATTGTCTTGGGAAAAAGGGAACAAGCATTTTAATCAAATTCTTCTAAATATATTGAACTACTTTCTTCCATATGTTCCTTTTCTTTTTACCCGAGGATGCATCTGGCATAGTCTATGTAAAGGTGAGATTTATAAATTCTATTTGGCC

Coding sequence (CDS)

ATGATTATTTCAGAAAAGAACCGTAGGGAAATCTCCAAATATCTCTTTCAAGAGGGGGTTTGCTATGCCAAGAAGGATTACAATTTGGCCAAGCACCCAGAAATCGACGTGCCTAACTTGCAGGTTATTAAGTTGATGCAGAGCTTCAAGTCCAAGGAATATGTGCGCGAGACATTTGCTTGGATGCATTACTACTGGTACCTCACCAATGATGGCATTGAGTTCCTTAGGACTTACCTCAATCTCCCTTCTGAAATTGTCCCTGCTACCTTGAAGAAACAAGCTAAGCCCGCTGGTAGGCCCTTTGGCGGACCACCTGGCGATCGCCCACGGGGTCCACCTCGTTTTGAGGGTGGTGAGAGGAGGTTTGGTGACCGTGATGGTTACCGTGGAGGTCCTCGTGGACCCGGCGGTGAGTTTGGTGGCGACAAAGGAGGAGCCCCTGCAGATTACAGGCCTTCGTTTGGGGGTCCTGGTGGAAGGCCAGGTTTCGGCCGTGGAGCTGGTGGCTATGGCGGAGGAGCTGCACCAAGCTCAAACCTTCCTTGA

Protein sequence

MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGGAAPSSNLP

Homology

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BLAST of IVF0015401 vs. ExPASy Swiss-Prot
Match: P0DKK8 (40S ribosomal protein S10-1 OS=Oryza sativa subsp. japonica OX=39947 GN=RPS10-1 PE=2 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 4.9e-75
Identity = 147/181 (81.22%), Postives = 159/181 (87.85%), Query Frame = 0


Query: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MII +KNR EI KYLFQEGV YAKKDYNLAKHP+IDVPNLQVIKLMQSFKSKEYVRETF+
Sbjct: 1   MIIPKKNRNEICKYLFQEGVLYAKKDYNLAKHPQIDVPNLQVIKLMQSFKSKEYVRETFS 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFG-GPPGDRPRGPPRFEGG 120
           W +YYWYLTNDGIE LR YLNLPSEIVPATLKK A+P GRPFG GPPGDRPRGPPRFEG 
Sbjct: 61  WQYYYWYLTNDGIEHLRNYLNLPSEIVPATLKKSARPPGRPFGSGPPGDRPRGPPRFEGD 120

Query: 121 ERRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGGAAPSS 180
             RFGDRDGYRGGPRG  G+FGG+KGGAPA+++PSF   GGRPGFGRG GG G GA P+S
Sbjct: 121 RPRFGDRDGYRGGPRGAPGDFGGEKGGAPAEFQPSFRSSGGRPGFGRGGGG-GFGAGPTS 180

[Close]

BLAST of IVF0015401 vs. ExPASy Swiss-Prot
Match: P0DKK9 (40S ribosomal protein S10-2 OS=Oryza sativa subsp. japonica OX=39947 GN=RPS10-2 PE=2 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 4.9e-75
Identity = 147/181 (81.22%), Postives = 159/181 (87.85%), Query Frame = 0


Query: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MII +KNR EI KYLFQEGV YAKKDYNLAKHP+IDVPNLQVIKLMQSFKSKEYVRETF+
Sbjct: 1   MIIPKKNRNEICKYLFQEGVLYAKKDYNLAKHPQIDVPNLQVIKLMQSFKSKEYVRETFS 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFG-GPPGDRPRGPPRFEGG 120
           W +YYWYLTNDGIE LR YLNLPSEIVPATLKK A+P GRPFG GPPGDRPRGPPRFEG 
Sbjct: 61  WQYYYWYLTNDGIEHLRNYLNLPSEIVPATLKKSARPPGRPFGSGPPGDRPRGPPRFEGD 120

Query: 121 ERRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGGAAPSS 180
             RFGDRDGYRGGPRG  G+FGG+KGGAPA+++PSF   GGRPGFGRG GG G GA P+S
Sbjct: 121 RPRFGDRDGYRGGPRGAPGDFGGEKGGAPAEFQPSFRSSGGRPGFGRGGGG-GFGAGPTS 180

[Close]

BLAST of IVF0015401 vs. ExPASy Swiss-Prot
Match: Q9SW09 (40S ribosomal protein S10-1 OS=Arabidopsis thaliana OX=3702 GN=RPS10A PE=1 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 6.4e-75
Identity = 144/182 (79.12%), Postives = 155/182 (85.16%), Query Frame = 0


Query: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MIISE NRREI KYLF+EGVC+AKKD+NL KHP IDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIISENNRREICKYLFKEGVCFAKKDFNLPKHPLIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120
           WMHYYW+LTN+GIEFLRTYLNLPS++VPATLKK AKP GRPFGGPPGDR RGPPR +G  
Sbjct: 61  WMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKPGGRPFGGPPGDRQRGPPRSDGDR 120

Query: 121 RRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGGAAPSSN 180
            RFGDRDGYRGGPRG     G +KGGAPAD++PSF G GGRPGFGRGAGGY   A   S 
Sbjct: 121 PRFGDRDGYRGGPRG-----GDEKGGAPADFQPSFQGGGGRPGFGRGAGGYSAAAPSGSG 177

Query: 181 LP 183
            P
Sbjct: 181 FP 177

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BLAST of IVF0015401 vs. ExPASy Swiss-Prot
Match: Q9LTF2 (40S ribosomal protein S10-3 OS=Arabidopsis thaliana OX=3702 GN=RPS10C PE=1 SV=2)

HSP 1 Score: 276.6 bits (706), Expect = 2.1e-73
Identity = 148/183 (80.87%), Postives = 159/183 (86.89%), Query Frame = 0


Query: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MIISE NR+EI KYLF+EGVC+AKKD+NLAKHP IDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIISEANRKEICKYLFKEGVCFAKKDFNLAKHPLIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120
           WMHYYW+LTN+GIEFLRTYLNLPS++VPATLKK AKP GRPFGGPPGDR RG PR EGG+
Sbjct: 61  WMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKPGGRPFGGPPGDRSRG-PRHEGGD 120

Query: 121 R-RFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGGAAPSS 180
           R RFGDRDGYR GPR  GGEFGG+KGGAPADY+PSF G G   GFGRGAGGY   A   S
Sbjct: 121 RPRFGDRDGYRAGPRA-GGEFGGEKGGAPADYQPSFQGSG--RGFGRGAGGYSAAAPSGS 179

Query: 181 NLP 183
            LP
Sbjct: 181 GLP 179

[Close]

BLAST of IVF0015401 vs. ExPASy Swiss-Prot
Match: Q9FFS8 (40S ribosomal protein S10-2 OS=Arabidopsis thaliana OX=3702 GN=RPS10B PE=2 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 6.9e-69
Identity = 149/185 (80.54%), Postives = 163/185 (88.11%), Query Frame = 0


Query: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEID-VPNLQVIKLMQSFKSKEYVRETF 60
           MIISE NRREISKYLF+EGV +AKKD+NL +HP I+ VPNLQVIKLMQSFKSKEYVRETF
Sbjct: 1   MIISETNRREISKYLFKEGVLFAKKDFNLPQHPLIESVPNLQVIKLMQSFKSKEYVRETF 60

Query: 61  AWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGG 120
           AWMHYYW+LTN+GI+FLRTYLNLPSEIVPATLKKQ KP GRPFGG  GDRPRGPPR + G
Sbjct: 61  AWMHYYWFLTNEGIDFLRTYLNLPSEIVPATLKKQQKPLGRPFGG-GGDRPRGPPRGD-G 120

Query: 121 ERRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSF-GGPGG-RPGFGRGAGGYGGGAAP 180
           ERRFGDRDGYRGGP+  GGE+ GDK GAPADY+P F GG GG R GFGRGAGG+GGGAA 
Sbjct: 121 ERRFGDRDGYRGGPKS-GGEY-GDKAGAPADYQPGFRGGAGGARQGFGRGAGGFGGGAA- 180

Query: 181 SSNLP 183
            S+LP
Sbjct: 181 GSDLP 180

[Close]

BLAST of IVF0015401 vs. ExPASy TrEMBL
Match: A0A1S3BST3 (40S ribosomal protein S10-1-like OS=Cucumis melo OX=3656 GN=LOC103493145 PE=4 SV=1)

HSP 1 Score: 365.2 bits (936), Expect = 1.6e-97
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0


Query: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120
           WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE
Sbjct: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120

Query: 121 RRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGGAAPSSN 180
           RRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGGAAPSSN
Sbjct: 121 RRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGGAAPSSN 180

Query: 181 LP 183
           LP
Sbjct: 181 LP 182

[Close]

BLAST of IVF0015401 vs. ExPASy TrEMBL
Match: A0A5D3CXK7 (40S ribosomal protein S10-1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G004510 PE=4 SV=1)

HSP 1 Score: 363.6 bits (932), Expect = 4.8e-97
Identity = 181/182 (99.45%), Postives = 182/182 (100.00%), Query Frame = 0


Query: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           +IISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 24  VIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 83

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120
           WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE
Sbjct: 84  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 143

Query: 121 RRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGGAAPSSN 180
           RRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGGAAPSSN
Sbjct: 144 RRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGGAAPSSN 203

Query: 181 LP 183
           LP
Sbjct: 204 LP 205

[Close]

BLAST of IVF0015401 vs. ExPASy TrEMBL
Match: A0A0A0KUQ3 (S10_plectin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G049090 PE=4 SV=1)

HSP 1 Score: 362.8 bits (930), Expect = 8.1e-97
Identity = 181/182 (99.45%), Postives = 181/182 (99.45%), Query Frame = 0


Query: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120
           WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE
Sbjct: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120

Query: 121 RRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGGAAPSSN 180
           RRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAG YGGGAAPSSN
Sbjct: 121 RRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAPSSN 180

Query: 181 LP 183
           LP
Sbjct: 181 LP 182

[Close]

BLAST of IVF0015401 vs. ExPASy TrEMBL
Match: A0A6J1JA51 (40S ribosomal protein S10-1-like OS=Cucurbita maxima OX=3661 GN=LOC111483100 PE=4 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 3.4e-95
Identity = 179/182 (98.35%), Postives = 179/182 (98.35%), Query Frame = 0


Query: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120
           WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE
Sbjct: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120

Query: 121 RRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGGAAPSSN 180
           RRFGDRDGYRGGPRGP GEFGGDKGGAPADYRPSFGGPGGRPGFGRGAG YGGGAA SSN
Sbjct: 121 RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSN 180

Query: 181 LP 183
           LP
Sbjct: 181 LP 182

[Close]

BLAST of IVF0015401 vs. ExPASy TrEMBL
Match: A0A5A7TTJ6 (40S ribosomal protein S10-1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G001330 PE=4 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 3.4e-95
Identity = 177/180 (98.33%), Postives = 179/180 (99.44%), Query Frame = 0


Query: 3   ISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWM 62
           +S+KNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWM
Sbjct: 16  LSQKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWM 75

Query: 63  HYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGERR 122
           HYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGERR
Sbjct: 76  HYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGERR 135

Query: 123 FGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGGAAPSSNLP 182
           FGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAG YGGGAAPSSNLP
Sbjct: 136 FGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAPSSNLP 195

[Close]

BLAST of IVF0015401 vs. NCBI nr
Match: XP_008452010.1 (PREDICTED: 40S ribosomal protein S10-1-like [Cucumis melo])

HSP 1 Score: 363 bits (931), Expect = 2.02e-126
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0


Query: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120
           WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE
Sbjct: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120

Query: 121 RRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGGAAPSSN 180
           RRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGGAAPSSN
Sbjct: 121 RRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGGAAPSSN 180

Query: 181 LP 182
           LP
Sbjct: 181 LP 182

[Close]

BLAST of IVF0015401 vs. NCBI nr
Match: XP_004146529.1 (40S ribosomal protein S10-1 [Cucumis sativus] >KGN53350.1 hypothetical protein Csa_014962 [Cucumis sativus])

HSP 1 Score: 360 bits (925), Expect = 1.66e-125
Identity = 181/182 (99.45%), Postives = 181/182 (99.45%), Query Frame = 0


Query: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120
           WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE
Sbjct: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120

Query: 121 RRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGGAAPSSN 180
           RRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAG YGGGAAPSSN
Sbjct: 121 RRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAPSSN 180

Query: 181 LP 182
           LP
Sbjct: 181 LP 182

[Close]

BLAST of IVF0015401 vs. NCBI nr
Match: TYK16623.1 (40S ribosomal protein S10-1-like [Cucumis melo var. makuwa])

HSP 1 Score: 361 bits (927), Expect = 1.86e-125
Identity = 181/182 (99.45%), Postives = 182/182 (100.00%), Query Frame = 0


Query: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           +IISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 24  VIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 83

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120
           WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE
Sbjct: 84  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 143

Query: 121 RRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGGAAPSSN 180
           RRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGGAAPSSN
Sbjct: 144 RRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGGAAPSSN 203

Query: 181 LP 182
           LP
Sbjct: 204 LP 205

[Close]

BLAST of IVF0015401 vs. NCBI nr
Match: XP_022985005.1 (40S ribosomal protein S10-1-like [Cucurbita maxima] >XP_022985006.1 40S ribosomal protein S10-1-like [Cucurbita maxima])

HSP 1 Score: 355 bits (911), Expect = 2.27e-123
Identity = 179/182 (98.35%), Postives = 179/182 (98.35%), Query Frame = 0


Query: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120
           WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE
Sbjct: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120

Query: 121 RRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGGAAPSSN 180
           RRFGDRDGYRGGPRGP GEFGGDKGGAPADYRPSFGGPGGRPGFGRGAG YGGGAA SSN
Sbjct: 121 RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSN 180

Query: 181 LP 182
           LP
Sbjct: 181 LP 182

[Close]

BLAST of IVF0015401 vs. NCBI nr
Match: KAA0044841.1 (40S ribosomal protein S10-1-like [Cucumis melo var. makuwa])

HSP 1 Score: 355 bits (911), Expect = 3.59e-123
Identity = 177/180 (98.33%), Postives = 179/180 (99.44%), Query Frame = 0


Query: 3   ISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWM 62
           +S+KNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWM
Sbjct: 16  LSQKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWM 75

Query: 63  HYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGERR 122
           HYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGERR
Sbjct: 76  HYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGERR 135

Query: 123 FGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGGAAPSSNLP 182
           FGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAG YGGGAAPSSNLP
Sbjct: 136 FGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAPSSNLP 195

[Close]

BLAST of IVF0015401 vs. TAIR 10
Match: AT4G25740.1 (RNA binding Plectin/S10 domain-containing protein )

HSP 1 Score: 281.6 bits (719), Expect = 4.6e-76
Identity = 144/182 (79.12%), Postives = 155/182 (85.16%), Query Frame = 0


Query: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MIISE NRREI KYLF+EGVC+AKKD+NL KHP IDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIISENNRREICKYLFKEGVCFAKKDFNLPKHPLIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120
           WMHYYW+LTN+GIEFLRTYLNLPS++VPATLKK AKP GRPFGGPPGDR RGPPR +G  
Sbjct: 61  WMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKPGGRPFGGPPGDRQRGPPRSDGDR 120

Query: 121 RRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGGAAPSSN 180
            RFGDRDGYRGGPRG     G +KGGAPAD++PSF G GGRPGFGRGAGGY   A   S 
Sbjct: 121 PRFGDRDGYRGGPRG-----GDEKGGAPADFQPSFQGGGGRPGFGRGAGGYSAAAPSGSG 177

Query: 181 LP 183
            P
Sbjct: 181 FP 177

[Close]

BLAST of IVF0015401 vs. TAIR 10
Match: AT5G52650.1 (RNA binding Plectin/S10 domain-containing protein )

HSP 1 Score: 276.6 bits (706), Expect = 1.5e-74
Identity = 148/183 (80.87%), Postives = 159/183 (86.89%), Query Frame = 0


Query: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MIISE NR+EI KYLF+EGVC+AKKD+NLAKHP IDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIISEANRKEICKYLFKEGVCFAKKDFNLAKHPLIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120
           WMHYYW+LTN+GIEFLRTYLNLPS++VPATLKK AKP GRPFGGPPGDR RG PR EGG+
Sbjct: 61  WMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKPGGRPFGGPPGDRSRG-PRHEGGD 120

Query: 121 R-RFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGGAAPSS 180
           R RFGDRDGYR GPR  GGEFGG+KGGAPADY+PSF G G   GFGRGAGGY   A   S
Sbjct: 121 RPRFGDRDGYRAGPRA-GGEFGGEKGGAPADYQPSFQGSG--RGFGRGAGGYSAAAPSGS 179

Query: 181 NLP 183
            LP
Sbjct: 181 GLP 179

[Close]

BLAST of IVF0015401 vs. TAIR 10
Match: AT5G41520.1 (RNA binding Plectin/S10 domain-containing protein )

HSP 1 Score: 261.5 bits (667), Expect = 4.9e-70
Identity = 149/185 (80.54%), Postives = 163/185 (88.11%), Query Frame = 0


Query: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEID-VPNLQVIKLMQSFKSKEYVRETF 60
           MIISE NRREISKYLF+EGV +AKKD+NL +HP I+ VPNLQVIKLMQSFKSKEYVRETF
Sbjct: 1   MIISETNRREISKYLFKEGVLFAKKDFNLPQHPLIESVPNLQVIKLMQSFKSKEYVRETF 60

Query: 61  AWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGG 120
           AWMHYYW+LTN+GI+FLRTYLNLPSEIVPATLKKQ KP GRPFGG  GDRPRGPPR + G
Sbjct: 61  AWMHYYWFLTNEGIDFLRTYLNLPSEIVPATLKKQQKPLGRPFGG-GGDRPRGPPRGD-G 120

Query: 121 ERRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSF-GGPGG-RPGFGRGAGGYGGGAAP 180
           ERRFGDRDGYRGGP+  GGE+ GDK GAPADY+P F GG GG R GFGRGAGG+GGGAA 
Sbjct: 121 ERRFGDRDGYRGGPKS-GGEY-GDKAGAPADYQPGFRGGAGGARQGFGRGAGGFGGGAA- 180

Query: 181 SSNLP 183
            S+LP
Sbjct: 181 GSDLP 180

[Close]

BLAST of IVF0015401 vs. TAIR 10
Match: AT4G25740.2 (RNA binding Plectin/S10 domain-containing protein )

HSP 1 Score: 226.9 bits (577), Expect = 1.3e-59
Identity = 121/182 (66.48%), Postives = 131/182 (71.98%), Query Frame = 0


Query: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MIISE NRREI KYLF+EGVC+AKKD+NL KHP IDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIISENNRREICKYLFKEGVCFAKKDFNLPKHPLIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120
           WMHYYW+LTN+GIEFLRTYLNLPS++VPATLKK AKP GRPFGGP G             
Sbjct: 61  WMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKPGGRPFGGPRG------------- 120

Query: 121 RRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGGAAPSSN 180
                               G +KGGAPAD++PSF G GGRPGFGRGAGGY   A   S 
Sbjct: 121 --------------------GDEKGGAPADFQPSFQGGGGRPGFGRGAGGYSAAAPSGSG 149

Query: 181 LP 183
            P
Sbjct: 181 FP 149

[Close]

BLAST of IVF0015401 vs. TAIR 10
Match: AT5G41520.2 (RNA binding Plectin/S10 domain-containing protein )

HSP 1 Score: 194.9 bits (494), Expect = 5.6e-50
Identity = 113/139 (81.29%), Postives = 122/139 (87.77%), Query Frame = 0


Query: 46  MQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGP 105
           MQSFKSKEYVRETFAWMHYYW+LTN+GI+FLRTYLNLPSEIVPATLKKQ KP GRPFGG 
Sbjct: 1   MQSFKSKEYVRETFAWMHYYWFLTNEGIDFLRTYLNLPSEIVPATLKKQQKPLGRPFGG- 60

Query: 106 PGDRPRGPPRFEGGERRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSF-GGPGG-RPG 165
            GDRPRGPPR + GERRFGDRDGYRGGP+  GGE+ GDK GAPADY+P F GG GG R G
Sbjct: 61  GGDRPRGPPRGD-GERRFGDRDGYRGGPKS-GGEY-GDKAGAPADYQPGFRGGAGGARQG 120

Query: 166 FGRGAGGYGGGAAPSSNLP 183
           FGRGAGG+GGGAA  S+LP
Sbjct: 121 FGRGAGGFGGGAA-GSDLP 134

The following BLAST results are available for this feature:

BLAST of IVF0015401 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0DKK8	4.9e-75	81.22	40S ribosomal protein S10-1 OS=Oryza sativa subsp. japonica OX=39947 GN=RPS10-1 ...	[more]
P0DKK9	4.9e-75	81.22	40S ribosomal protein S10-2 OS=Oryza sativa subsp. japonica OX=39947 GN=RPS10-2 ...	[more]
Q9SW09	6.4e-75	79.12	40S ribosomal protein S10-1 OS=Arabidopsis thaliana OX=3702 GN=RPS10A PE=1 SV=1	[more]
Q9LTF2	2.1e-73	80.87	40S ribosomal protein S10-3 OS=Arabidopsis thaliana OX=3702 GN=RPS10C PE=1 SV=2	[more]
Q9FFS8	6.9e-69	80.54	40S ribosomal protein S10-2 OS=Arabidopsis thaliana OX=3702 GN=RPS10B PE=2 SV=1	[more]

BLAST of IVF0015401 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BST3	1.6e-97	100.00	40S ribosomal protein S10-1-like OS=Cucumis melo OX=3656 GN=LOC103493145 PE=4 SV...	[more]
A0A5D3CXK7	4.8e-97	99.45	40S ribosomal protein S10-1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A0A0KUQ3	8.1e-97	99.45	S10_plectin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G049090...	[more]
A0A6J1JA51	3.4e-95	98.35	40S ribosomal protein S10-1-like OS=Cucurbita maxima OX=3661 GN=LOC111483100 PE=...	[more]
A0A5A7TTJ6	3.4e-95	98.33	40S ribosomal protein S10-1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27...	[more]

BLAST of IVF0015401 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008452010.1	2.02e-126	100.00	PREDICTED: 40S ribosomal protein S10-1-like [Cucumis melo]	[more]
XP_004146529.1	1.66e-125	99.45	40S ribosomal protein S10-1 [Cucumis sativus] >KGN53350.1 hypothetical protein C...	[more]
TYK16623.1	1.86e-125	99.45	40S ribosomal protein S10-1-like [Cucumis melo var. makuwa]	[more]
XP_022985005.1	2.27e-123	98.35	40S ribosomal protein S10-1-like [Cucurbita maxima] >XP_022985006.1 40S ribosoma...	[more]
KAA0044841.1	3.59e-123	98.33	40S ribosomal protein S10-1-like [Cucumis melo var. makuwa]	[more]

BLAST of IVF0015401 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G25740.1	4.6e-76	79.12	RNA binding Plectin/S10 domain-containing protein	[more]
AT5G52650.1	1.5e-74	80.87	RNA binding Plectin/S10 domain-containing protein	[more]
AT5G41520.1	4.9e-70	80.54	RNA binding Plectin/S10 domain-containing protein	[more]
AT4G25740.2	1.3e-59	66.48	RNA binding Plectin/S10 domain-containing protein	[more]
AT5G41520.2	5.6e-50	81.29	RNA binding Plectin/S10 domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005326	Plectin/S10, N-terminal	PFAM	PF03501	S10_plectin	coord: 3..94 e-value: 1.1E-42 score: 144.0
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 1..104 e-value: 2.2E-47 score: 161.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 91..182
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 113..129
None	No IPR available	PANTHER	PTHR12146:SF20	40S RIBOSOMAL PROTEIN S10-1-LIKE	coord: 1..182
IPR037447	40S Ribosomal protein S10	PANTHER	PTHR12146	40S RIBOSOMAL PROTEIN S10	coord: 1..182

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0015401.1	IVF0015401.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0022627	cytosolic small ribosomal subunit
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome