IVF0015370 (gene) Melon (IVF77) v1

Overview


Name	IVF0015370
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	BHLH domain-containing protein
Location	chr12: 23984957 .. 23985364 (-)
RNA-Seq Expression	IVF0015370
Synteny	IVF0015370

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTGGTAGATCTCGTTCAAGACAGTCAAGTGGTGTAAGAATCAGCGACGAGCAAATCACTGATCTTGTTCACAAATTGCAGCAACTCTTGCCTGAGATTCGTAATCGTCACTCAGACAAGGTGTGCATGTATTATCAAAATCTAAAAACTTAATGTGGTATTGAGCTAGCTAACTTACCACCTGAGTTTTTCCTTTTTCTTTTCTTTTCTTTTGTTGAGGTTTATTCAAAGATTTTTCTTTTTCTAATTGTGTAGGTTTCAGCAGCAAAGGTTTTGCAAGAGACATGCAATTACATTAGAAGCTTACACAGAGAAGTGGATGATTTGAGTGAGAGGCTCTCGGAGTTGTTGGCCACATCGGACACAGCTCAAGCCGCCATTATTAGAAGCTTGCTCACTCAGTGA

mRNA sequence

ATGTCTGGTAGATCTCGTTCAAGACAGTCAAGTGGTGTAAGAATCAGCGACGAGCAAATCACTGATCTTGTTCACAAATTGCAGCAACTCTTGCCTGAGATTCGTAATCGTCACTCAGACAAGGTTTCAGCAGCAAAGGTTTTGCAAGAGACATGCAATTACATTAGAAGCTTACACAGAGAAGTGGATGATTTGAGTGAGAGGCTCTCGGAGTTGTTGGCCACATCGGACACAGCTCAAGCCGCCATTATTAGAAGCTTGCTCACTCAGTGA

Coding sequence (CDS)

ATGTCTGGTAGATCTCGTTCAAGACAGTCAAGTGGTGTAAGAATCAGCGACGAGCAAATCACTGATCTTGTTCACAAATTGCAGCAACTCTTGCCTGAGATTCGTAATCGTCACTCAGACAAGGTTTCAGCAGCAAAGGTTTTGCAAGAGACATGCAATTACATTAGAAGCTTACACAGAGAAGTGGATGATTTGAGTGAGAGGCTCTCGGAGTTGTTGGCCACATCGGACACAGCTCAAGCCGCCATTATTAGAAGCTTGCTCACTCAGTGA

Protein sequence

MSGRSRSRQSSGVRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSLHREVDDLSERLSELLATSDTAQAAIIRSLLTQ

Homology

[Close]

BLAST of IVF0015370 vs. ExPASy Swiss-Prot
Match: Q9CA64 (Transcription factor PRE3 OS=Arabidopsis thaliana OX=3702 GN=PRE3 PE=1 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 5.3e-30
Identity = 76/93 (81.72%), Postives = 85/93 (91.40%), Query Frame = 0


Query: 1  MSG-RSRSRQSSGV-RISDEQITDLVHKLQQLLPEIR-NRHSDKVSAAKVLQETCNYIRS 60
          MSG RSRSRQSSG  RIS++QI DL+ KLQQLLPE+R +R SDKVSAA+VLQ+TCNYIR+
Sbjct: 1  MSGRRSRSRQSSGTSRISEDQINDLIIKLQQLLPELRDSRRSDKVSAARVLQDTCNYIRN 60

Query: 61 LHREVDDLSERLSELLATSDTAQAAIIRSLLTQ 91
          LHREVDDLSERLSELLA SDTAQAA+IRSLLTQ
Sbjct: 61 LHREVDDLSERLSELLANSDTAQAALIRSLLTQ 93

[Close]

BLAST of IVF0015370 vs. ExPASy Swiss-Prot
Match: Q8GW32 (Transcription factor PRE6 OS=Arabidopsis thaliana OX=3702 GN=PRE6 PE=1 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 3.2e-27
Identity = 69/92 (75.00%), Postives = 80/92 (86.96%), Query Frame = 0


Query: 1  MSGR--SRSRQSSGVRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSL 60
          MS R  SRSRQS   RISD+QI+DLV KLQ L+PE+R R SDKVSA+KVLQETCNYIR+L
Sbjct: 1  MSSRRSSRSRQSGSSRISDDQISDLVSKLQHLIPELRRRRSDKVSASKVLQETCNYIRNL 60

Query: 61 HREVDDLSERLSELLATSD--TAQAAIIRSLL 89
          HREVDDLS+RLSELLA++D  +A+AAIIRSLL
Sbjct: 61 HREVDDLSDRLSELLASTDDNSAEAAIIRSLL 92

[Close]

BLAST of IVF0015370 vs. ExPASy Swiss-Prot
Match: B8APB5 (Transcription factor ILI6 OS=Oryza sativa subsp. indica OX=39946 GN=ILI6 PE=3 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 9.4e-27
Identity = 68/89 (76.40%), Postives = 77/89 (86.52%), Query Frame = 0


Query: 2  SGRSRSRQSSGVRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSLHRE 61
          S RSRSRQS   RI+DEQI+DLV KLQ LLPE R R +D+V +++VLQETCNYIRSLH+E
Sbjct: 3  SRRSRSRQSGSSRITDEQISDLVSKLQDLLPEARLRSNDRVPSSRVLQETCNYIRSLHQE 62

Query: 62 VDDLSERLSELLATSD--TAQAAIIRSLL 89
          VDDLSERLSELLATSD  +AQAAIIRSLL
Sbjct: 63 VDDLSERLSELLATSDMSSAQAAIIRSLL 91

[Close]

BLAST of IVF0015370 vs. ExPASy Swiss-Prot
Match: Q0DUR2 (Transcription factor ILI6 OS=Oryza sativa subsp. japonica OX=39947 GN=ILI6 PE=1 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 9.4e-27
Identity = 68/89 (76.40%), Postives = 77/89 (86.52%), Query Frame = 0


Query: 2  SGRSRSRQSSGVRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSLHRE 61
          S RSRSRQS   RI+DEQI+DLV KLQ LLPE R R +D+V +++VLQETCNYIRSLH+E
Sbjct: 3  SRRSRSRQSGSSRITDEQISDLVSKLQDLLPEARLRSNDRVPSSRVLQETCNYIRSLHQE 62

Query: 62 VDDLSERLSELLATSD--TAQAAIIRSLL 89
          VDDLSERLSELLATSD  +AQAAIIRSLL
Sbjct: 63 VDDLSERLSELLATSDMSSAQAAIIRSLL 91

[Close]

BLAST of IVF0015370 vs. ExPASy Swiss-Prot
Match: A2Z730 (Transcription factor ILI7 OS=Oryza sativa subsp. indica OX=39946 GN=ILI7 PE=3 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 6.1e-26
Identity = 66/90 (73.33%), Postives = 75/90 (83.33%), Query Frame = 0


Query: 1  MSGRSRSRQSSGVRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSLHR 60
          MS RSRSR SS  RI+DEQI DLV KLQ LLPE R R +D+V +A+VLQETC+YIRSLHR
Sbjct: 1  MSSRSRSRASSAARITDEQIGDLVSKLQALLPEARLRSNDRVPSARVLQETCSYIRSLHR 60

Query: 61 EVDDLSERLSELLATSD--TAQAAIIRSLL 89
          EVDDLSERL+ELLA +D  TAQAA+IR LL
Sbjct: 61 EVDDLSERLAELLAAADVSTAQAAVIRGLL 90

[Close]

BLAST of IVF0015370 vs. ExPASy TrEMBL
Match: A0A1S4DU40 (transcription factor PRE3-like OS=Cucumis melo OX=3656 GN=LOC103482850 PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 1.9e-38
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0


Query: 1  MSGRSRSRQSSGVRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSLHR 60
          MSGRSRSRQSSGVRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSLHR
Sbjct: 1  MSGRSRSRQSSGVRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSLHR 60

Query: 61 EVDDLSERLSELLATSDTAQAAIIRSLLTQ 91
          EVDDLSERLSELLATSDTAQAAIIRSLLTQ
Sbjct: 61 EVDDLSERLSELLATSDTAQAAIIRSLLTQ 90

[Close]

BLAST of IVF0015370 vs. ExPASy TrEMBL
Match: A0A0A0LQQ1 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G045430 PE=4 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 9.4e-38
Identity = 89/90 (98.89%), Postives = 89/90 (98.89%), Query Frame = 0


Query: 1  MSGRSRSRQSSGVRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSLHR 60
          MSGRSRSRQSS VRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSLHR
Sbjct: 1  MSGRSRSRQSSSVRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSLHR 60

Query: 61 EVDDLSERLSELLATSDTAQAAIIRSLLTQ 91
          EVDDLSERLSELLATSDTAQAAIIRSLLTQ
Sbjct: 61 EVDDLSERLSELLATSDTAQAAIIRSLLTQ 90

[Close]

BLAST of IVF0015370 vs. ExPASy TrEMBL
Match: A0A6J1GU92 (transcription factor PRE3-like OS=Cucurbita moschata OX=3662 GN=LOC111457173 PE=4 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 9.4e-38
Identity = 89/90 (98.89%), Postives = 89/90 (98.89%), Query Frame = 0


Query: 1  MSGRSRSRQSSGVRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSLHR 60
          MSGRSRSRQSS VRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSLHR
Sbjct: 1  MSGRSRSRQSSAVRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSLHR 60

Query: 61 EVDDLSERLSELLATSDTAQAAIIRSLLTQ 91
          EVDDLSERLSELLATSDTAQAAIIRSLLTQ
Sbjct: 61 EVDDLSERLSELLATSDTAQAAIIRSLLTQ 90

[Close]

BLAST of IVF0015370 vs. ExPASy TrEMBL
Match: A0A6J1K5U5 (transcription factor PRE3-like OS=Cucurbita maxima OX=3661 GN=LOC111490325 PE=4 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 8.0e-37
Identity = 88/90 (97.78%), Postives = 88/90 (97.78%), Query Frame = 0


Query: 1  MSGRSRSRQSSGVRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSLHR 60
          MSG SRSRQSS VRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSLHR
Sbjct: 1  MSGISRSRQSSAVRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSLHR 60

Query: 61 EVDDLSERLSELLATSDTAQAAIIRSLLTQ 91
          EVDDLSERLSELLATSDTAQAAIIRSLLTQ
Sbjct: 61 EVDDLSERLSELLATSDTAQAAIIRSLLTQ 90

[Close]

BLAST of IVF0015370 vs. ExPASy TrEMBL
Match: A0A5D3BJ22 (Transcription factor PRE3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G003000 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 3.0e-36
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0


Query: 5  SRSRQSSGVRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSLHREVDD 64
          SRSRQSSGVRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSLHREVDD
Sbjct: 6  SRSRQSSGVRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSLHREVDD 65

Query: 65 LSERLSELLATSDTAQAAIIRSLLTQ 91
          LSERLSELLATSDTAQAAIIRSLLTQ
Sbjct: 66 LSERLSELLATSDTAQAAIIRSLLTQ 91

[Close]

BLAST of IVF0015370 vs. NCBI nr
Match: XP_016899225.1 (PREDICTED: transcription factor PRE3-like [Cucumis melo] >XP_038895619.1 transcription factor PRE3-like [Benincasa hispida])

HSP 1 Score: 168 bits (426), Expect = 2.26e-52
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0


Query: 1  MSGRSRSRQSSGVRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSLHR 60
          MSGRSRSRQSSGVRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSLHR
Sbjct: 1  MSGRSRSRQSSGVRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSLHR 60

Query: 61 EVDDLSERLSELLATSDTAQAAIIRSLLTQ 90
          EVDDLSERLSELLATSDTAQAAIIRSLLTQ
Sbjct: 61 EVDDLSERLSELLATSDTAQAAIIRSLLTQ 90

[Close]

BLAST of IVF0015370 vs. NCBI nr
Match: XP_004152438.1 (transcription factor PRE3 [Cucumis sativus])

HSP 1 Score: 166 bits (420), Expect = 1.86e-51
Identity = 89/90 (98.89%), Postives = 89/90 (98.89%), Query Frame = 0


Query: 1  MSGRSRSRQSSGVRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSLHR 60
          MSGRSRSRQSS VRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSLHR
Sbjct: 1  MSGRSRSRQSSSVRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSLHR 60

Query: 61 EVDDLSERLSELLATSDTAQAAIIRSLLTQ 90
          EVDDLSERLSELLATSDTAQAAIIRSLLTQ
Sbjct: 61 EVDDLSERLSELLATSDTAQAAIIRSLLTQ 90

[Close]

BLAST of IVF0015370 vs. NCBI nr
Match: XP_022955105.1 (transcription factor PRE3-like [Cucurbita moschata])

HSP 1 Score: 166 bits (420), Expect = 1.86e-51
Identity = 89/90 (98.89%), Postives = 89/90 (98.89%), Query Frame = 0


Query: 1  MSGRSRSRQSSGVRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSLHR 60
          MSGRSRSRQSS VRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSLHR
Sbjct: 1  MSGRSRSRQSSAVRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSLHR 60

Query: 61 EVDDLSERLSELLATSDTAQAAIIRSLLTQ 90
          EVDDLSERLSELLATSDTAQAAIIRSLLTQ
Sbjct: 61 EVDDLSERLSELLATSDTAQAAIIRSLLTQ 90

[Close]

BLAST of IVF0015370 vs. NCBI nr
Match: XP_023542851.1 (transcription factor PRE3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 166 bits (419), Expect = 2.64e-51
Identity = 88/90 (97.78%), Postives = 89/90 (98.89%), Query Frame = 0


Query: 1  MSGRSRSRQSSGVRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSLHR 60
          MSGRSRSRQSS +RISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSLHR
Sbjct: 1  MSGRSRSRQSSAIRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSLHR 60

Query: 61 EVDDLSERLSELLATSDTAQAAIIRSLLTQ 90
          EVDDLSERLSELLATSDTAQAAIIRSLLTQ
Sbjct: 61 EVDDLSERLSELLATSDTAQAAIIRSLLTQ 90

[Close]

BLAST of IVF0015370 vs. NCBI nr
Match: KAG7012197.1 (Transcription factor PRE3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 164 bits (416), Expect = 7.59e-51
Identity = 88/90 (97.78%), Postives = 88/90 (97.78%), Query Frame = 0


Query: 1  MSGRSRSRQSSGVRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSLHR 60
          MSGRSRSRQSS VRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSLHR
Sbjct: 1  MSGRSRSRQSSAVRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSLHR 60

Query: 61 EVDDLSERLSELLATSDTAQAAIIRSLLTQ 90
          EVDDLSERLSELL TSDTAQAAIIRSLLTQ
Sbjct: 61 EVDDLSERLSELLVTSDTAQAAIIRSLLTQ 90

[Close]

BLAST of IVF0015370 vs. TAIR 10
Match: AT1G74500.1 (activation-tagged BRI1(brassinosteroid-insensitive 1)-suppressor 1 )

HSP 1 Score: 131.3 bits (329), Expect = 3.8e-31
Identity = 76/93 (81.72%), Postives = 85/93 (91.40%), Query Frame = 0


Query: 1  MSG-RSRSRQSSGV-RISDEQITDLVHKLQQLLPEIR-NRHSDKVSAAKVLQETCNYIRS 60
          MSG RSRSRQSSG  RIS++QI DL+ KLQQLLPE+R +R SDKVSAA+VLQ+TCNYIR+
Sbjct: 1  MSGRRSRSRQSSGTSRISEDQINDLIIKLQQLLPELRDSRRSDKVSAARVLQDTCNYIRN 60

Query: 61 LHREVDDLSERLSELLATSDTAQAAIIRSLLTQ 91
          LHREVDDLSERLSELLA SDTAQAA+IRSLLTQ
Sbjct: 61 LHREVDDLSERLSELLANSDTAQAALIRSLLTQ 93

[Close]

BLAST of IVF0015370 vs. TAIR 10
Match: AT1G26945.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 122.1 bits (305), Expect = 2.3e-28
Identity = 69/92 (75.00%), Postives = 80/92 (86.96%), Query Frame = 0


Query: 1  MSGR--SRSRQSSGVRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSL 60
          MS R  SRSRQS   RISD+QI+DLV KLQ L+PE+R R SDKVSA+KVLQETCNYIR+L
Sbjct: 1  MSSRRSSRSRQSGSSRISDDQISDLVSKLQHLIPELRRRRSDKVSASKVLQETCNYIRNL 60

Query: 61 HREVDDLSERLSELLATSD--TAQAAIIRSLL 89
          HREVDDLS+RLSELLA++D  +A+AAIIRSLL
Sbjct: 61 HREVDDLSDRLSELLASTDDNSAEAAIIRSLL 92

[Close]

BLAST of IVF0015370 vs. TAIR 10
Match: AT3G47710.1 (BANQUO 3 )

HSP 1 Score: 106.3 bits (264), Expect = 1.3e-23
Identity = 59/90 (65.56%), Postives = 75/90 (83.33%), Query Frame = 0


Query: 2  SGRSRSRQSSGVRISDEQITDLVHKLQQLLPEI-RNRHSDKVSAAKVLQETCNYIRSLHR 61
          S +SRSRQ+    I+DEQI DLV +L +LLPE+  NR S KVSA++VLQETC+YIR+L +
Sbjct: 3  SRKSRSRQTGASMITDEQINDLVLQLHRLLPELANNRRSGKVSASRVLQETCSYIRNLSK 62

Query: 62 EVDDLSERLSELLATSDTAQAAIIRSLLTQ 91
          EVDDLSERLS+LL ++D+AQAA+IRSLL Q
Sbjct: 63 EVDDLSERLSQLLESTDSAQAALIRSLLMQ 92

[Close]

BLAST of IVF0015370 vs. TAIR 10
Match: AT3G28857.1 (basic helix-loop-helix (bHLH) DNA-binding family protein )

HSP 1 Score: 100.9 bits (250), Expect = 5.5e-22
Identity = 58/91 (63.74%), Postives = 70/91 (76.92%), Query Frame = 0


Query: 1  MSGRSRSRQSSGVRISDEQITDLVHKLQQLLPEI-RNRHSDKVSAAKVLQETCNYIRSLH 60
          MS R   + S+  RISD+Q+ DLV KL+Q LPEI   R SDKVSA+KVLQETCNYIR LH
Sbjct: 1  MSNRRSRQTSNASRISDDQMIDLVSKLRQFLPEIHERRRSDKVSASKVLQETCNYIRKLH 60

Query: 61 REVDDLSERLSELL--ATSDTAQAAIIRSLL 89
          REVD+LS+RLS+LL     D+ +AA+IRSLL
Sbjct: 61 REVDNLSDRLSQLLDSVDEDSPEAAVIRSLL 91

[Close]

BLAST of IVF0015370 vs. TAIR 10
Match: AT5G39860.1 (basic helix-loop-helix (bHLH) DNA-binding family protein )

HSP 1 Score: 100.5 bits (249), Expect = 7.2e-22
Identity = 58/91 (63.74%), Postives = 72/91 (79.12%), Query Frame = 0


Query: 1  MSGRSRSRQSSGVRISDEQITDLVHKLQQLLPEI-RNRHSDKVSAAKVLQETCNYIRSLH 60
          MS R   + SS  RISD Q+ DLV KL+Q+LPEI + R SDK SA+KVLQETCNYIR+L+
Sbjct: 1  MSNRRSRQSSSAPRISDNQMIDLVSKLRQILPEIGQRRRSDKASASKVLQETCNYIRNLN 60

Query: 61 REVDDLSERLSELLAT--SDTAQAAIIRSLL 89
          REVD+LSERLS+LL +   D+ +AA+IRSLL
Sbjct: 61 REVDNLSERLSQLLESVDEDSPEAAVIRSLL 91

The following BLAST results are available for this feature:

BLAST of IVF0015370 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9CA64	5.3e-30	81.72	Transcription factor PRE3 OS=Arabidopsis thaliana OX=3702 GN=PRE3 PE=1 SV=1	[more]
Q8GW32	3.2e-27	75.00	Transcription factor PRE6 OS=Arabidopsis thaliana OX=3702 GN=PRE6 PE=1 SV=1	[more]
B8APB5	9.4e-27	76.40	Transcription factor ILI6 OS=Oryza sativa subsp. indica OX=39946 GN=ILI6 PE=3 SV...	[more]
Q0DUR2	9.4e-27	76.40	Transcription factor ILI6 OS=Oryza sativa subsp. japonica OX=39947 GN=ILI6 PE=1 ...	[more]
A2Z730	6.1e-26	73.33	Transcription factor ILI7 OS=Oryza sativa subsp. indica OX=39946 GN=ILI7 PE=3 SV...	[more]

BLAST of IVF0015370 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4DU40	1.9e-38	100.00	transcription factor PRE3-like OS=Cucumis melo OX=3656 GN=LOC103482850 PE=4 SV=1	[more]
A0A0A0LQQ1	9.4e-38	98.89	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G045430 PE=4 S...	[more]
A0A6J1GU92	9.4e-38	98.89	transcription factor PRE3-like OS=Cucurbita moschata OX=3662 GN=LOC111457173 PE=...	[more]
A0A6J1K5U5	8.0e-37	97.78	transcription factor PRE3-like OS=Cucurbita maxima OX=3661 GN=LOC111490325 PE=4 ...	[more]
A0A5D3BJ22	3.0e-36	100.00	Transcription factor PRE3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]

BLAST of IVF0015370 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016899225.1	2.26e-52	100.00	PREDICTED: transcription factor PRE3-like [Cucumis melo] >XP_038895619.1 transcr...	[more]
XP_004152438.1	1.86e-51	98.89	transcription factor PRE3 [Cucumis sativus]	[more]
XP_022955105.1	1.86e-51	98.89	transcription factor PRE3-like [Cucurbita moschata]	[more]
XP_023542851.1	2.64e-51	97.78	transcription factor PRE3-like [Cucurbita pepo subsp. pepo]	[more]
KAG7012197.1	7.59e-51	97.78	Transcription factor PRE3, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of IVF0015370 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G74500.1	3.8e-31	81.72	activation-tagged BRI1(brassinosteroid-insensitive 1)-suppressor 1	[more]
AT1G26945.1	2.3e-28	75.00	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G47710.1	1.3e-23	65.56	BANQUO 3	[more]
AT3G28857.1	5.5e-22	63.74	basic helix-loop-helix (bHLH) DNA-binding family protein	[more]
AT5G39860.1	7.2e-22	63.74	basic helix-loop-helix (bHLH) DNA-binding family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 55..82
None	No IPR available	PANTHER	PTHR46446:SF3	TRANSCRIPTION FACTOR PRE3	coord: 2..88
None	No IPR available	CDD	cd11442	bHLH_AtPRE_like	coord: 15..75 e-value: 2.68071E-20 score: 74.6471
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 17..86 e-value: 2.5E-9 score: 39.2
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 18..76
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 19..59 e-value: 2.1E-5 score: 24.5
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 4..58 score: 10.823129
IPR044293	Transcription factor PRE	PANTHER	PTHR46446	TRANSCRIPTION FACTOR PRE	coord: 2..88

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0015370.1	IVF0015370.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0040008	regulation of growth
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046983	protein dimerization activity