IVF0015346 (gene) Melon (IVF77) v1

Overview


Name	IVF0015346
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	ATP-dependent zinc metalloprotease FtsH
Location	chr06: 17337592 .. 17338163 (-)
RNA-Seq Expression	IVF0015346
Synteny	IVF0015346

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGGAATTCATGCCTTGGCGACTAGGTATTCAGGACATTGAACTTCTTTGGTTTATTTTAGTTAATAGATTACATTTAATGCATCACACTATATGACATGTTATCTTATGACTAAGGCAAGTGTCTATCATAGGGCCTTTGGGGTCCACGCCCCCATGTTGAGAACTTAATAATTTGGTGAAATCTCTCTGAAAATTAGTGGGGTCTCAACATCCCATGTTATTGGATATTAGATGTCATTTATTCTGTTAATCTTTTTCATGTCTTTTCTTTTAAGCAACAGCCAAAAGATCAGACTATTTATTTTCATCCGTCTTCATTCTTATAAATACTATTATGTCTCAGGCGTCAGGGAATTTTCAAGAAATCTACGGATCTTCTCTACAATGCAGCTACCCTAGAGAGGGAAACCACATTGAACCAACTTCTTGTAGAGCTTGATGGATTCGATACTGGAAAGGGTGTTATACTTTTAGCTGCCACGACTAGAAGAGATCTGTTAGATCCTCCGCTTCTCCGACCGGGTCCTTTTGATGAAAGGTTCAACTTTTTGATTCATGAATCATGA

mRNA sequence

ATGGATGGAATTCATGCCTTGGCGACTAGGCGTCAGGGAATTTTCAAGAAATCTACGGATCTTCTCTACAATGCAGCTACCCTAGAGAGGGAAACCACATTGAACCAACTTCTTGTAGAGCTTGATGGATTCGATACTGGAAAGGGTGTTATACTTTTAGCTGCCACGACTAGAAGAGATCTGTTAGATCCTCCGCTTCTCCGACCGGGTCCTTTTGATGAAAGGTTCAACTTTTTGATTCATGAATCATGA

Coding sequence (CDS)

ATGGATGGAATTCATGCCTTGGCGACTAGGCGTCAGGGAATTTTCAAGAAATCTACGGATCTTCTCTACAATGCAGCTACCCTAGAGAGGGAAACCACATTGAACCAACTTCTTGTAGAGCTTGATGGATTCGATACTGGAAAGGGTGTTATACTTTTAGCTGCCACGACTAGAAGAGATCTGTTAGATCCTCCGCTTCTCCGACCGGGTCCTTTTGATGAAAGGTTCAACTTTTTGATTCATGAATCATGA

Protein sequence

MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRDLLDPPLLRPGPFDERFNFLIHES

Homology

[Close]

BLAST of IVF0015346 vs. ExPASy Swiss-Prot
Match: O22993 (Probable inactive ATP-dependent zinc metalloprotease FTSHI 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FTSHI1 PE=1 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 8.7e-27
Identity = 59/75 (78.67%), Postives = 65/75 (86.67%), Query Frame = 0


Query: 1   MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRD 60
           +D I ALATRRQGIFK+++D LYNAAT ERETTLNQLL+ELDGFDTGKGVI L AT RRD
Sbjct: 528 IDEIDALATRRQGIFKENSDQLYNAATQERETTLNQLLIELDGFDTGKGVIFLGATNRRD 587

Query: 61  LLDPPLLRPGPFDER 76
           LLDP LLRPG FD +
Sbjct: 588 LLDPALLRPGRFDRK 602

[Close]

BLAST of IVF0015346 vs. ExPASy Swiss-Prot
Match: Q67LC0 (ATP-dependent zinc metalloprotease FtsH 1 OS=Symbiobacterium thermophilum (strain T / IAM 14863) OX=292459 GN=ftsH1 PE=3 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 4.2e-13
Identity = 41/73 (56.16%), Postives = 52/73 (71.23%), Query Frame = 0


Query: 1   MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRD 60
           +D I ALA RR+G+            T ERE T+NQLLVE+DGFD+G+GVI++AAT R D
Sbjct: 244 IDEIDALA-RRRGVGA-------GGGTEEREQTINQLLVEMDGFDSGEGVIVVAATNRPD 303

Query: 61  LLDPPLLRPGPFD 74
           +LDP +LRPG FD
Sbjct: 304 VLDPAVLRPGRFD 308

[Close]

BLAST of IVF0015346 vs. ExPASy Swiss-Prot
Match: D0MGU8 (ATP-dependent zinc metalloprotease FtsH OS=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) OX=518766 GN=ftsH PE=3 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 5.5e-13
Identity = 41/76 (53.95%), Postives = 52/76 (68.42%), Query Frame = 0


Query: 1   MDGIHALA-TRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRR 60
           +D I A+  +R +GI   + D        ERE TLNQLLVE+DGF+T KGVI++AAT R 
Sbjct: 309 IDEIDAIGRSRGRGIMMGAND--------ERENTLNQLLVEMDGFNTDKGVIIMAATNRP 368

Query: 61  DLLDPPLLRPGPFDER 76
           D+LDP LLRPG FD +
Sbjct: 369 DVLDPALLRPGRFDRQ 376

[Close]

BLAST of IVF0015346 vs. ExPASy Swiss-Prot
Match: D1CDT8 (ATP-dependent zinc metalloprotease FtsH OS=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) OX=525904 GN=ftsH PE=3 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 1.6e-12
Identity = 35/47 (74.47%), Postives = 40/47 (85.11%), Query Frame = 0


Query: 29  ERETTLNQLLVELDGFDTGKGVILLAATTRRDLLDPPLLRPGPFDER 76
           ERE TLNQLLVE+DGFD+ +GVI+LAAT R D+LDP LLRPG FD R
Sbjct: 316 EREQTLNQLLVEMDGFDSRQGVIVLAATNRPDVLDPALLRPGRFDRR 362

[Close]

BLAST of IVF0015346 vs. ExPASy Swiss-Prot
Match: B4U7U4 (ATP-dependent zinc metalloprotease FtsH OS=Hydrogenobaculum sp. (strain Y04AAS1) OX=380749 GN=ftsH PE=3 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 2.1e-12
Identity = 32/47 (68.09%), Postives = 40/47 (85.11%), Query Frame = 0


Query: 29  ERETTLNQLLVELDGFDTGKGVILLAATTRRDLLDPPLLRPGPFDER 76
           ERE TLNQLLVE+DGFDT +G++++AAT R D+LDP LLRPG FD +
Sbjct: 281 EREQTLNQLLVEMDGFDTSEGILIIAATNRPDILDPALLRPGRFDRQ 327

[Close]

BLAST of IVF0015346 vs. ExPASy TrEMBL
Match: A0A5A7UX59 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G004050 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 1.5e-29
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0


Query: 1   MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRD 60
           MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRD
Sbjct: 227 MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRD 286

Query: 61  LLDPPLLRP 70
           LLDPPLLRP
Sbjct: 287 LLDPPLLRP 295

[Close]

BLAST of IVF0015346 vs. ExPASy TrEMBL
Match: A0A5D3BRA0 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold420G00550 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 1.5e-29
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0


Query: 1   MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRD 60
           MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRD
Sbjct: 216 MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRD 275

Query: 61  LLDPPLLRP 70
           LLDPPLLRP
Sbjct: 276 LLDPPLLRP 284

[Close]

BLAST of IVF0015346 vs. ExPASy TrEMBL
Match: A0A7J8WYF3 (AAA domain-containing protein OS=Gossypium aridum OX=34290 GN=Goari_011716 PE=3 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 2.6e-26
Identity = 63/78 (80.77%), Postives = 68/78 (87.18%), Query Frame = 0


Query: 1   MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRD 60
           +D I ALATRRQGIFK++TD LYNAAT ERETTLNQLL+ELDGFDTGKGVI LAAT RRD
Sbjct: 533 IDEIDALATRRQGIFKETTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRD 592

Query: 61  LLDPPLLRPGPFDERFNF 79
           LLDP LLRPG FD + NF
Sbjct: 593 LLDPALLRPGRFDRKVNF 610

[Close]

BLAST of IVF0015346 vs. ExPASy TrEMBL
Match: A0A022Q7Y5 (AAA domain-containing protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a000926mg PE=4 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 1.0e-25
Identity = 62/75 (82.67%), Postives = 66/75 (88.00%), Query Frame = 0


Query: 1   MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRD 60
           +D I ALATRRQGIFK+STDLLYNAAT ERETTLNQLL+ELDGFDTGKGVI L AT RRD
Sbjct: 530 IDEIDALATRRQGIFKESTDLLYNAATQERETTLNQLLIELDGFDTGKGVIFLGATNRRD 589

Query: 61  LLDPPLLRPGPFDER 76
           LLDP LLRPG FD +
Sbjct: 590 LLDPALLRPGRFDRK 604

[Close]

BLAST of IVF0015346 vs. ExPASy TrEMBL
Match: A0A2I4HMZ7 (probable inactive ATP-dependent zinc metalloprotease FTSHI 1, chloroplastic OS=Juglans regia OX=51240 GN=LOC109019649 PE=4 SV=2)

HSP 1 Score: 125.2 bits (313), Expect = 1.3e-25
Identity = 62/75 (82.67%), Postives = 66/75 (88.00%), Query Frame = 0


Query: 1   MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRD 60
           +D I ALATRRQGIFK+STD LYNAAT ERETTLNQLL+ELDGFDTGKGVI LAAT RRD
Sbjct: 540 IDEIDALATRRQGIFKESTDYLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRD 599

Query: 61  LLDPPLLRPGPFDER 76
           LLDP LLRPG FD +
Sbjct: 600 LLDPALLRPGRFDRK 614

[Close]

BLAST of IVF0015346 vs. NCBI nr
Match: TYK00786.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 137 bits (345), Expect = 2.44e-35
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0


Query: 1   MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRD 60
           MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRD
Sbjct: 216 MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRD 275

Query: 61  LLDPPLLRP 69
           LLDPPLLRP
Sbjct: 276 LLDPPLLRP 284

[Close]

BLAST of IVF0015346 vs. NCBI nr
Match: KAA0060543.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 137 bits (345), Expect = 2.44e-35
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0


Query: 1   MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRD 60
           MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRD
Sbjct: 227 MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRD 286

Query: 61  LLDPPLLRP 69
           LLDPPLLRP
Sbjct: 287 LLDPPLLRP 295

[Close]

BLAST of IVF0015346 vs. NCBI nr
Match: PKI77897.1 (hypothetical protein CRG98_001689 [Punica granatum])

HSP 1 Score: 122 bits (307), Expect = 4.88e-34
Identity = 62/78 (79.49%), Postives = 66/78 (84.62%), Query Frame = 0


Query: 1   MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRD 60
           +D I ALATRRQGIFK+STD LYNA T ERETTLNQLL+ELDGFDTGKGVI LAAT RRD
Sbjct: 35  IDEIDALATRRQGIFKESTDQLYNAGTQERETTLNQLLIELDGFDTGKGVIFLAATNRRD 94

Query: 61  LLDPPLLRPGPFDERFNF 78
           LLDP LLRPG FD +  F
Sbjct: 95  LLDPALLRPGRFDRKVCF 112

[Close]

BLAST of IVF0015346 vs. NCBI nr
Match: XP_019242689.1 (PREDICTED: probable inactive ATP-dependent zinc metalloprotease FTSHI 1, chloroplastic [Nicotiana attenuata] >OIT08798.1 putative inactive atp-dependent zinc metalloprotease ftshi 1, chloroplastic [Nicotiana attenuata])

HSP 1 Score: 119 bits (299), Expect = 8.06e-33
Identity = 60/75 (80.00%), Postives = 64/75 (85.33%), Query Frame = 0


Query: 1   MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRD 60
           +D I ALATRRQGIF +STD LYNAAT ERETTLNQLL+ELDGFDTGKGVI L AT RRD
Sbjct: 35  IDEIDALATRRQGIFSESTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLGATNRRD 94

Query: 61  LLDPPLLRPGPFDER 75
           LLDP LLRPG FD +
Sbjct: 95  LLDPALLRPGRFDRK 109

[Close]

BLAST of IVF0015346 vs. NCBI nr
Match: TYH05561.1 (hypothetical protein ES288_A08G092700v1 [Gossypium darwinii] >TYI13938.1 hypothetical protein ES332_A08G093500v1 [Gossypium tomentosum])

HSP 1 Score: 118 bits (296), Expect = 1.48e-32
Identity = 60/78 (76.92%), Postives = 64/78 (82.05%), Query Frame = 0


Query: 1  MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRD 60
          +D I ALATRRQGIFK++TD LYNAAT ERETTLNQLL+ELDGFDTGKGVI   AT RRD
Sbjct: 14 IDEIDALATRRQGIFKETTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFSTATNRRD 73

Query: 61 LLDPPLLRPGPFDERFNF 78
          LLDP LLR G FD   NF
Sbjct: 74 LLDPALLRQGRFDREVNF 91

[Close]

BLAST of IVF0015346 vs. TAIR 10
Match: AT4G23940.1 (FtsH extracellular protease family )

HSP 1 Score: 120.6 bits (301), Expect = 6.2e-28
Identity = 59/75 (78.67%), Postives = 65/75 (86.67%), Query Frame = 0


Query: 1   MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRD 60
           +D I ALATRRQGIFK+++D LYNAAT ERETTLNQLL+ELDGFDTGKGVI L AT RRD
Sbjct: 528 IDEIDALATRRQGIFKENSDQLYNAATQERETTLNQLLIELDGFDTGKGVIFLGATNRRD 587

Query: 61  LLDPPLLRPGPFDER 76
           LLDP LLRPG FD +
Sbjct: 588 LLDPALLRPGRFDRK 602

[Close]

BLAST of IVF0015346 vs. TAIR 10
Match: AT3G47060.1 (FTSH protease 7 )

HSP 1 Score: 68.9 bits (167), Expect = 2.1e-12
Identity = 37/73 (50.68%), Postives = 46/73 (63.01%), Query Frame = 0


Query: 1   MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRD 60
           +D I A+A  R G F+  ++        ERE TLNQLL E+DGFD+   VI+L AT R D
Sbjct: 423 IDEIDAVAKSRDGKFRMGSN-------DEREQTLNQLLTEMDGFDSNSAVIVLGATNRAD 482

Query: 61  LLDPPLLRPGPFD 74
           +LDP L RPG FD
Sbjct: 483 VLDPALRRPGRFD 488

[Close]

BLAST of IVF0015346 vs. TAIR 10
Match: AT5G58870.1 (FTSH protease 9 )

HSP 1 Score: 68.2 bits (165), Expect = 3.6e-12
Identity = 37/73 (50.68%), Postives = 45/73 (61.64%), Query Frame = 0


Query: 1   MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRD 60
           +D I A+A  R G F+         +  ERE TLNQLL E+DGFD+   VI+L AT R D
Sbjct: 427 IDEIDAVAKSRDGKFRM-------VSNDEREQTLNQLLTEMDGFDSSSAVIVLGATNRAD 486

Query: 61  LLDPPLLRPGPFD 74
           +LDP L RPG FD
Sbjct: 487 VLDPALRRPGRFD 492

[Close]

BLAST of IVF0015346 vs. TAIR 10
Match: AT1G07510.1 (FTSH protease 10 )

HSP 1 Score: 65.9 bits (159), Expect = 1.8e-11
Identity = 31/47 (65.96%), Postives = 37/47 (78.72%), Query Frame = 0


Query: 29  ERETTLNQLLVELDGFDTGKGVILLAATTRRDLLDPPLLRPGPFDER 76
           ERE+TLNQLLVE+DGF T  GV++LA T R D+LD  LLRPG FD +
Sbjct: 446 ERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQ 492

[Close]

BLAST of IVF0015346 vs. TAIR 10
Match: AT2G29080.1 (FTSH protease 3 )

HSP 1 Score: 65.9 bits (159), Expect = 1.8e-11
Identity = 31/47 (65.96%), Postives = 37/47 (78.72%), Query Frame = 0


Query: 29  ERETTLNQLLVELDGFDTGKGVILLAATTRRDLLDPPLLRPGPFDER 76
           ERE+TLNQLLVE+DGF T  GV++LA T R D+LD  LLRPG FD +
Sbjct: 440 ERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQ 486

The following BLAST results are available for this feature:

BLAST of IVF0015346 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22993	8.7e-27	78.67	Probable inactive ATP-dependent zinc metalloprotease FTSHI 1, chloroplastic OS=A...	[more]
Q67LC0	4.2e-13	56.16	ATP-dependent zinc metalloprotease FtsH 1 OS=Symbiobacterium thermophilum (strai...	[more]
D0MGU8	5.5e-13	53.95	ATP-dependent zinc metalloprotease FtsH OS=Rhodothermus marinus (strain ATCC 438...	[more]
D1CDT8	1.6e-12	74.47	ATP-dependent zinc metalloprotease FtsH OS=Thermobaculum terrenum (strain ATCC B...	[more]
B4U7U4	2.1e-12	68.09	ATP-dependent zinc metalloprotease FtsH OS=Hydrogenobaculum sp. (strain Y04AAS1)...	[more]

BLAST of IVF0015346 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UX59	1.5e-29	100.00	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5D3BRA0	1.5e-29	100.00	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A7J8WYF3	2.6e-26	80.77	AAA domain-containing protein OS=Gossypium aridum OX=34290 GN=Goari_011716 PE=3 ...	[more]
A0A022Q7Y5	1.0e-25	82.67	AAA domain-containing protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a00092...	[more]
A0A2I4HMZ7	1.3e-25	82.67	probable inactive ATP-dependent zinc metalloprotease FTSHI 1, chloroplastic OS=J...	[more]

BLAST of IVF0015346 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK00786.1	2.44e-35	100.00	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0060543.1	2.44e-35	100.00	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
PKI77897.1	4.88e-34	79.49	hypothetical protein CRG98_001689 [Punica granatum]	[more]
XP_019242689.1	8.06e-33	80.00	PREDICTED: probable inactive ATP-dependent zinc metalloprotease FTSHI 1, chlorop...	[more]
TYH05561.1	1.48e-32	76.92	hypothetical protein ES288_A08G092700v1 [Gossypium darwinii] >TYI13938.1 hypothe...	[more]

BLAST of IVF0015346 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23940.1	6.2e-28	78.67	FtsH extracellular protease family	[more]
AT3G47060.1	2.1e-12	50.68	FTSH protease 7	[more]
AT5G58870.1	3.6e-12	50.68	FTSH protease 9	[more]
AT1G07510.1	1.8e-11	65.96	FTSH protease 10	[more]
AT2G29080.1	1.8e-11	65.96	FTSH protease 3	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 1..79 e-value: 1.8E-13 score: 52.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 29..78
IPR003959	ATPase, AAA-type, core	PFAM	PF00004	AAA	coord: 1..78 e-value: 1.7E-10 score: 41.5
None	No IPR available	PANTHER	PTHR23076	METALLOPROTEASE M41 FTSH	coord: 2..76
None	No IPR available	PANTHER	PTHR23076:SF111	INACTIVE ATP-DEPENDENT ZINC METALLOPROTEASE FTSHI 1, CHLOROPLASTIC-RELATED	coord: 2..76

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0015346.1	IVF0015346.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
cellular_component	GO:0009534	chloroplast thylakoid
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004176	ATP-dependent peptidase activity
molecular_function	GO:0016887	ATP hydrolysis activity
molecular_function	GO:0004222	metalloendopeptidase activity
molecular_function	GO:0003676	nucleic acid binding