IVF0015291 (gene) Melon (IVF77) v1

Overview
NameIVF0015291
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Locationchr06: 18810796 .. 18810987 (+)
RNA-Seq ExpressionIVF0015291
SyntenyIVF0015291
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGGTGAAGAGTGCTTCAATAGTAAGCTTGGTCGACGCCGTTCTGTTCTCACGTCAGGATAGGCGACGGCGACGCTTTTCTCACAACGTCTTTATCGACATCAGTTTCAGCATCGGGGTAGCCTCTTCTGATCCATTTCTAGATTATGCGGACGCATATCTGCATCGGCATATTCCCTTCTTCTTGTAG

mRNA sequence

ATGTCGGTGAAGAGTGCTTCAATAGTAAGCTTGGTCGACGCCGTTCTGTTCTCACGTCAGGATAGGCGACGGCGACGCTTTTCTCACAACGTCTTTATCGACATCAGTTTCAGCATCGGGGTAGCCTCTTCTGATCCATTTCTAGATTATGCGGACGCATATCTGCATCGGCATATTCCCTTCTTCTTGTAG

Coding sequence (CDS)

ATGTCGGTGAAGAGTGCTTCAATAGTAAGCTTGGTCGACGCCGTTCTGTTCTCACGTCAGGATAGGCGACGGCGACGCTTTTCTCACAACGTCTTTATCGACATCAGTTTCAGCATCGGGGTAGCCTCTTCTGATCCATTTCTAGATTATGCGGACGCATATCTGCATCGGCATATTCCCTTCTTCTTGTAG

Protein sequence

MSVKSASIVSLVDAVLFSRQDRRRRRFSHNVFIDISFSIGVASSDPFLDYADAYLHRHIPFFL
Homology
[Close]
BLAST of IVF0015291 vs. NCBI nr
Match: TYK03725.1 (KH domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 49.3 bits (116), Expect = 5.23e-05
Identity = 29/59 (49.15%), Postives = 36/59 (61.02%), Query Frame = 0 

Query: 1  MSVKSASIVSLVDAVLFSRQDRRRRRFSHNVFIDISFSIGVASSDPFLDYADAYLHRHI 59
          MS KSAS+V   +A+   R+ R  R   HNV   +SF+IGVAS+D F DYAD  L   I
Sbjct: 1  MSAKSASVVIFANALCRCRE-RLHRPIFHNVLTKVSFNIGVASTDAFQDYADVELRGAI 58

The following BLAST results are available for this feature:
BLAST of IVF0015291 vs.
Match NameE-valueIdentityDescription
BLAST of IVF0015291 vs.
Match NameE-valueIdentityDescription
BLAST of IVF0015291 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK03725.15.23e-0549.15KH domain-containing protein [Cucumis melo var. makuwa][more]
BLAST of IVF0015291 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0015291.1IVF0015291.1mRNA