IVF0014956 (gene) Melon (IVF77) v1

Overview
NameIVF0014956
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Locationtig00000607_ERROPOS641385+: 257332 .. 257604 (+)
RNA-Seq ExpressionIVF0014956
SyntenyIVF0014956
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGTGATGAAGATCTCAGAAGTTCGAGTGGAGCTGTTTGCGTGTAGCCGTTTGAGTGTAGCTGATCTATTCGCATCGAGGGTCATCGTTAGCATCGATCTTCGTCAAAGTTTATCAGCAGCCGTCTGTAAAGTCGATCTTCATCGAAGTTCATCAGTAGTCATCCTCAGAGTTGGTCATCGTTCAAGGTTATCAGCAGCCGTAGTCATTCGTGGCTGCCCTCGTTTTGCATCGCTCGTCGCTGTTGTGGCTGCTATGGTTTTAGGTTAG

mRNA sequence

ATGAAAGTGATGAAGATCTCAGAAGTTCGAGTGGAGCTGTTTGCGTGTAGCCGTTTGAGTGTAGCTGATCTATTCGCATCGAGGGTCATCGTTAGCATCGATCTTCGTCAAAGTTTATCAGCAGCCGTCTGTAAAGTCGATCTTCATCGAAGTTCATCAGTAGTCATCCTCAGAGTTGGTCATCGTTCAAGGTTATCAGCAGCCGTAGTCATTCGTGGCTGCCCTCGTTTTGCATCGCTCGTCGCTGTTGTGGCTGCTATGGTTTTAGGTTAG

Coding sequence (CDS)

ATGAAAGTGATGAAGATCTCAGAAGTTCGAGTGGAGCTGTTTGCGTGTAGCCGTTTGAGTGTAGCTGATCTATTCGCATCGAGGGTCATCGTTAGCATCGATCTTCGTCAAAGTTTATCAGCAGCCGTCTGTAAAGTCGATCTTCATCGAAGTTCATCAGTAGTCATCCTCAGAGTTGGTCATCGTTCAAGGTTATCAGCAGCCGTAGTCATTCGTGGCTGCCCTCGTTTTGCATCGCTCGTCGCTGTTGTGGCTGCTATGGTTTTAGGTTAG

Protein sequence

MKVMKISEVRVELFACSRLSVADLFASRVIVSIDLRQSLSAAVCKVDLHRSSSVVILRVGHRSRLSAAVVIRGCPRFASLVAVVAAMVLG
Homology
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BLAST of IVF0014956 vs. ExPASy TrEMBL
Match: A0A5D3CV99 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold8046G00030 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 3.1e-04
Identity = 30/48 (62.50%), Postives = 35/48 (72.92%), Query Frame = 0 

Query: 11 VELFACSRLSVADLFASRVIVSIDLRQSLSAAVCKVDLHRSSSVVILR 59
          +ELF CSRLS ADL  SRV+  +DL QS SAAV +VD  RSS  VI+R
Sbjct: 1  MELFECSRLSAADLLTSRVVARVDLFQSSSAAVVRVDRRRSSLAVIVR 48

[Close]
BLAST of IVF0014956 vs. NCBI nr
Match: KAA0045021.1 (hypothetical protein E6C27_scaffold30G00060 [Cucumis melo var. makuwa] >TYK14179.1 hypothetical protein E5676_scaffold8046G00030 [Cucumis melo var. makuwa])

HSP 1 Score: 54.7 bits (130), Expect = 6.47e-07
Identity = 30/47 (63.83%), Postives = 34/47 (72.34%), Query Frame = 0 

Query: 12 ELFACSRLSVADLFASRVIVSIDLRQSLSAAVCKVDLHRSSSVVILR 58
          ELF CSRLS ADL  SRV+  +DL QS SAAV +VD  RSS  VI+R
Sbjct: 2  ELFECSRLSAADLLTSRVVARVDLFQSSSAAVVRVDRRRSSLAVIVR 48

The following BLAST results are available for this feature:
BLAST of IVF0014956 vs.
Match NameE-valueIdentityDescription
BLAST of IVF0014956 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3CV993.1e-0462.50Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of IVF0014956 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0045021.16.47e-0763.83hypothetical protein E6C27_scaffold30G00060 [Cucumis melo var. makuwa] >TYK14179... [more]
BLAST of IVF0014956 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0014956.1IVF0014956.1mRNA