Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTGCCTTCGTACAGATTGGGGAAGCATGTGGTGGGTTTATTGAAGCAGCTCCGGAAACAGTAGACAAAGCAGAGCTGACTGAAGCTTTGATTAAGGTGAAGGATAACTACACGATGTTCTTACCAGCATTTATCAAAATCTATGATGAAGAAGGAAGTGATTTCACTATCCATACAATAACACATCCAGAAGGAAGATGGCTGAGAGAAAGAAATCCCGGAATCCATGGTTCCTTTACTAGAAATGCTGCTGAAATATTCAACGAATACAATCCATATGCTGAACAGTATACCTTTGATAGGAATCTCGCTGTTATAAGCCAAAAAGACTCGTCGGAAACATCAAAAAGCAGAAACAACAAGATGAACACTCGTCGGAAAACTGGACCCACAAAAATGAATAAAAAATTCAACAAAGCTGTTAGTTTTTTGAATTTGAATTATGAGGGTGACAGCGACAACAGTAACCTATCAGAAAAAGTGAAGAAATAG
mRNA sequence
ATGTCTGCCTTCGTACAGATTGGGGAAGCATGTGGTGGGTTTATTGAAGCAGCTCCGGAAACAGTAGACAAAGCAGAGCTGACTGAAGCTTTGATTAAGGTGAAGGATAACTACACGATGTTCTTACCAGCATTTATCAAAATCTATGATGAAGAAGGAAGTGATTTCACTATCCATACAATAACACATCCAGAAGGAAGATGGCTGAGAGAAAGAAATCCCGGAATCCATGGTTCCTTTACTAGAAATGCTGCTGAAATATTCAACGAATACAATCCATATGCTGAACAGTATACCTTTGATAGGAATCTCGCTGTTATAAGCCAAAAAGACTCGTCGGAAACATCAAAAAGCAGAAACAACAAGATGAACACTCGTCGGAAAACTGGACCCACAAAAATGAATAAAAAATTCAACAAAGCTGTTAGTTTTTTGAATTTGAATTATGAGGGTGACAGCGACAACAGTAACCTATCAGAAAAAGTGAAGAAATAG
Coding sequence (CDS)
ATGTCTGCCTTCGTACAGATTGGGGAAGCATGTGGTGGGTTTATTGAAGCAGCTCCGGAAACAGTAGACAAAGCAGAGCTGACTGAAGCTTTGATTAAGGTGAAGGATAACTACACGATGTTCTTACCAGCATTTATCAAAATCTATGATGAAGAAGGAAGTGATTTCACTATCCATACAATAACACATCCAGAAGGAAGATGGCTGAGAGAAAGAAATCCCGGAATCCATGGTTCCTTTACTAGAAATGCTGCTGAAATATTCAACGAATACAATCCATATGCTGAACAGTATACCTTTGATAGGAATCTCGCTGTTATAAGCCAAAAAGACTCGTCGGAAACATCAAAAAGCAGAAACAACAAGATGAACACTCGTCGGAAAACTGGACCCACAAAAATGAATAAAAAATTCAACAAAGCTGTTAGTTTTTTGAATTTGAATTATGAGGGTGACAGCGACAACAGTAACCTATCAGAAAAAGTGAAGAAATAG
Protein sequence
MSAFVQIGEACGGFIEAAPETVDKAELTEALIKVKDNYTMFLPAFIKIYDEEGSDFTIHTITHPEGRWLRERNPGIHGSFTRNAAEIFNEYNPYAEQYTFDRNLAVISQKDSSETSKSRNNKMNTRRKTGPTKMNKKFNKAVSFLNLNYEGDSDNSNLSEKVKK
Homology
BLAST of IVF0014954 vs. ExPASy TrEMBL
Match:
A0A5D3CR17 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold488G00750 PE=4 SV=1)
HSP 1 Score: 302.8 bits (774), Expect = 9.0e-79
Identity = 152/158 (96.20%), Postives = 153/158 (96.84%), Query Frame = 0
Query: 7 IGEACGGFIEAAPETVDKAELTEALIKVKDNYTMFLPAFIKIYDEEGSDFTIHTITHPEG 66
IGEACGGFIEAAPETVDKAELTEALIKVKDNYTMFLPAFIKIYDEEGSDFTIHTITHPEG
Sbjct: 57 IGEACGGFIEAAPETVDKAELTEALIKVKDNYTMFLPAFIKIYDEEGSDFTIHTITHPEG 116
Query: 67 RWLRERNPGIHGSFTRNAAEIFNEYNPYAEQYTFDRNLAVISQKDSSETSKSRNNKMNTR 126
RWLRERNPGIHGSFTRNAAEIFNEYNPYAEQYTFDRNLAVISQKDSSETSKSRNNKMNTR
Sbjct: 117 RWLRERNPGIHGSFTRNAAEIFNEYNPYAEQYTFDRNLAVISQKDSSETSKSRNNKMNTR 176
Query: 127 RKTGPTKMNKKFNKAVSFLNLNYEGDSDNSNLSEKVKK 165
RKTGPTKMNKKFNKAVSFLNLNYEGDSDN + K KK
Sbjct: 177 RKTGPTKMNKKFNKAVSFLNLNYEGDSDNKRQNLKEKK 214
BLAST of IVF0014954 vs. ExPASy TrEMBL
Match:
A0A5D3DFT7 (Mitotic spindle checkpoint protein mad1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1428G00270 PE=4 SV=1)
HSP 1 Score: 252.7 bits (644), Expect = 1.1e-63
Identity = 129/164 (78.66%), Postives = 140/164 (85.37%), Query Frame = 0
Query: 1 MSAFVQIGEACGGFIEAAPETVDKAELTEALIKVKDNYTMFLPAFIKIYDEEGSDFTIHT 60
MS FVQIGEAC GFI+AAPETV+K ELTEALIKVKD YT FLPAFIKI+DEEGS+F I
Sbjct: 32 MSTFVQIGEACCGFIDAAPETVNKVELTEALIKVKDTYTDFLPAFIKIHDEEGSNFIIQI 91
Query: 61 ITHPEGRWLRERNPGIHGSFTRNAAEIFNEYNPYAEQYTFDRNLAVISQKDSSETSKSRN 120
TH EGRWLRERNP IH SFT+NAAE FNEYN Y EQ TF RNLA++SQKDS ET KSR
Sbjct: 92 ATHSEGRWLRERNPSIHSSFTKNAAENFNEYNLYVEQNTFKRNLAMVSQKDSPETLKSRT 151
Query: 121 NKMNTRRKTGPTKMNKKFNKAVSFLNLNYEGDSDNSNLSEKVKK 165
KMN RK GPTK+NKKFNKAVSFLNLNYEGDSDNSNLS+K++K
Sbjct: 152 KKMNACRKNGPTKINKKFNKAVSFLNLNYEGDSDNSNLSDKIEK 195
BLAST of IVF0014954 vs. ExPASy TrEMBL
Match:
A0A5D3DLT1 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G00990 PE=4 SV=1)
HSP 1 Score: 243.0 bits (619), Expect = 8.5e-61
Identity = 117/164 (71.34%), Postives = 142/164 (86.59%), Query Frame = 0
Query: 1 MSAFVQIGEACGGFIEAAPETVDKAELTEALIKVKDNYTMFLPAFIKIYDEEGSDFTIHT 60
++ F+QIGEACGGFI+AAPE+++K ELTEALIKVK+NYT FLPAFI+I+DEEG DF + T
Sbjct: 325 LNTFIQIGEACGGFIDAAPESINKLELTEALIKVKENYTGFLPAFIQIHDEEGQDFIVQT 384
Query: 61 ITHPEGRWLRERNPGIHGSFTRNAAEIFNEYNPYAEQYTFDRNLAVISQKDSSETSKSRN 120
ITHPEG+WLRERNP +HGSFT++AAE FNE+NPYAEQYTF RN AVI++ D E+SK +
Sbjct: 385 ITHPEGKWLRERNPSVHGSFTKSAAEKFNEFNPYAEQYTFRRNFAVIAKPDLPESSKKGS 444
Query: 121 NKMNTRRKTGPTKMNKKFNKAVSFLNLNYEGDSDNSNLSEKVKK 165
+MN RK GPTK KKFNK+VSFLNLNYEGDSD+SN SEK++K
Sbjct: 445 KQMNNDRKMGPTKTIKKFNKSVSFLNLNYEGDSDSSNSSEKIQK 488
BLAST of IVF0014954 vs. ExPASy TrEMBL
Match:
A0A5D3E0Y8 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G001820 PE=4 SV=1)
HSP 1 Score: 240.4 bits (612), Expect = 5.5e-60
Identity = 119/164 (72.56%), Postives = 140/164 (85.37%), Query Frame = 0
Query: 1 MSAFVQIGEACGGFIEAAPETVDKAELTEALIKVKDNYTMFLPAFIKIYDEEGSDFTIHT 60
++ F+QIGEA GGFI+AAPE+V+K ELTEALIKVK+NYT FLPAFI+I+DEEG DF I T
Sbjct: 294 LNTFIQIGEAYGGFIDAAPESVNKLELTEALIKVKENYTGFLPAFIQIHDEEGHDFIIQT 353
Query: 61 ITHPEGRWLRERNPGIHGSFTRNAAEIFNEYNPYAEQYTFDRNLAVISQKDSSETSKSRN 120
+THP+G+WLRERNP IHGSFT+ AAE FNE+NPYAEQYTF RNLAVI++ D E+SK +
Sbjct: 354 VTHPKGKWLRERNPSIHGSFTKTAAENFNEFNPYAEQYTFRRNLAVIAKPDLPESSKKGS 413
Query: 121 NKMNTRRKTGPTKMNKKFNKAVSFLNLNYEGDSDNSNLSEKVKK 165
+MN RK GPTK KKFNK VSFLNLNYEGDSDNSN SEK++K
Sbjct: 414 KQMNNDRKMGPTKTIKKFNKTVSFLNLNYEGDSDNSNSSEKIQK 457
BLAST of IVF0014954 vs. ExPASy TrEMBL
Match:
A0A5A7TTA1 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G001820 PE=4 SV=1)
HSP 1 Score: 240.4 bits (612), Expect = 5.5e-60
Identity = 119/164 (72.56%), Postives = 140/164 (85.37%), Query Frame = 0
Query: 1 MSAFVQIGEACGGFIEAAPETVDKAELTEALIKVKDNYTMFLPAFIKIYDEEGSDFTIHT 60
++ F+QIGEA GGFI+AAPE+V+K ELTEALIKVK+NYT FLPAFI+I+DEEG DF I T
Sbjct: 294 LNTFIQIGEAYGGFIDAAPESVNKLELTEALIKVKENYTGFLPAFIQIHDEEGHDFIIQT 353
Query: 61 ITHPEGRWLRERNPGIHGSFTRNAAEIFNEYNPYAEQYTFDRNLAVISQKDSSETSKSRN 120
+THP+G+WLRERNP IHGSFT+ AAE FNE+NPYAEQYTF RNLAVI++ D E+SK +
Sbjct: 354 VTHPKGKWLRERNPSIHGSFTKTAAENFNEFNPYAEQYTFRRNLAVIAKPDLPESSKKGS 413
Query: 121 NKMNTRRKTGPTKMNKKFNKAVSFLNLNYEGDSDNSNLSEKVKK 165
+MN RK GPTK KKFNK VSFLNLNYEGDSDNSN SEK++K
Sbjct: 414 KQMNNDRKMGPTKTIKKFNKTVSFLNLNYEGDSDNSNSSEKIQK 457
BLAST of IVF0014954 vs. NCBI nr
Match:
TYK13812.1 (hypothetical protein E5676_scaffold488G00750 [Cucumis melo var. makuwa])
HSP 1 Score: 305 bits (781), Expect = 2.45e-101
Identity = 152/158 (96.20%), Postives = 153/158 (96.84%), Query Frame = 0
Query: 7 IGEACGGFIEAAPETVDKAELTEALIKVKDNYTMFLPAFIKIYDEEGSDFTIHTITHPEG 66
IGEACGGFIEAAPETVDKAELTEALIKVKDNYTMFLPAFIKIYDEEGSDFTIHTITHPEG
Sbjct: 57 IGEACGGFIEAAPETVDKAELTEALIKVKDNYTMFLPAFIKIYDEEGSDFTIHTITHPEG 116
Query: 67 RWLRERNPGIHGSFTRNAAEIFNEYNPYAEQYTFDRNLAVISQKDSSETSKSRNNKMNTR 126
RWLRERNPGIHGSFTRNAAEIFNEYNPYAEQYTFDRNLAVISQKDSSETSKSRNNKMNTR
Sbjct: 117 RWLRERNPGIHGSFTRNAAEIFNEYNPYAEQYTFDRNLAVISQKDSSETSKSRNNKMNTR 176
Query: 127 RKTGPTKMNKKFNKAVSFLNLNYEGDSDNSNLSEKVKK 164
RKTGPTKMNKKFNKAVSFLNLNYEGDSDN + K KK
Sbjct: 177 RKTGPTKMNKKFNKAVSFLNLNYEGDSDNKRQNLKEKK 214
BLAST of IVF0014954 vs. NCBI nr
Match:
KAA0055409.1 (mitotic spindle checkpoint protein mad1 [Cucumis melo var. makuwa] >TYK22318.1 mitotic spindle checkpoint protein mad1 [Cucumis melo var. makuwa])
HSP 1 Score: 255 bits (651), Expect = 1.31e-83
Identity = 129/164 (78.66%), Postives = 140/164 (85.37%), Query Frame = 0
Query: 1 MSAFVQIGEACGGFIEAAPETVDKAELTEALIKVKDNYTMFLPAFIKIYDEEGSDFTIHT 60
MS FVQIGEAC GFI+AAPETV+K ELTEALIKVKD YT FLPAFIKI+DEEGS+F I
Sbjct: 32 MSTFVQIGEACCGFIDAAPETVNKVELTEALIKVKDTYTDFLPAFIKIHDEEGSNFIIQI 91
Query: 61 ITHPEGRWLRERNPGIHGSFTRNAAEIFNEYNPYAEQYTFDRNLAVISQKDSSETSKSRN 120
TH EGRWLRERNP IH SFT+NAAE FNEYN Y EQ TF RNLA++SQKDS ET KSR
Sbjct: 92 ATHSEGRWLRERNPSIHSSFTKNAAENFNEYNLYVEQNTFKRNLAMVSQKDSPETLKSRT 151
Query: 121 NKMNTRRKTGPTKMNKKFNKAVSFLNLNYEGDSDNSNLSEKVKK 164
KMN RK GPTK+NKKFNKAVSFLNLNYEGDSDNSNLS+K++K
Sbjct: 152 KKMNACRKNGPTKINKKFNKAVSFLNLNYEGDSDNSNLSDKIEK 195
BLAST of IVF0014954 vs. NCBI nr
Match:
KAA0039949.1 (hypothetical protein E6C27_scaffold122G002290 [Cucumis melo var. makuwa] >TYK24554.1 hypothetical protein E5676_scaffold266G00990 [Cucumis melo var. makuwa])
HSP 1 Score: 245 bits (626), Expect = 5.92e-74
Identity = 117/164 (71.34%), Postives = 142/164 (86.59%), Query Frame = 0
Query: 1 MSAFVQIGEACGGFIEAAPETVDKAELTEALIKVKDNYTMFLPAFIKIYDEEGSDFTIHT 60
++ F+QIGEACGGFI+AAPE+++K ELTEALIKVK+NYT FLPAFI+I+DEEG DF + T
Sbjct: 325 LNTFIQIGEACGGFIDAAPESINKLELTEALIKVKENYTGFLPAFIQIHDEEGQDFIVQT 384
Query: 61 ITHPEGRWLRERNPGIHGSFTRNAAEIFNEYNPYAEQYTFDRNLAVISQKDSSETSKSRN 120
ITHPEG+WLRERNP +HGSFT++AAE FNE+NPYAEQYTF RN AVI++ D E+SK +
Sbjct: 385 ITHPEGKWLRERNPSVHGSFTKSAAEKFNEFNPYAEQYTFRRNFAVIAKPDLPESSKKGS 444
Query: 121 NKMNTRRKTGPTKMNKKFNKAVSFLNLNYEGDSDNSNLSEKVKK 164
+MN RK GPTK KKFNK+VSFLNLNYEGDSD+SN SEK++K
Sbjct: 445 KQMNNDRKMGPTKTIKKFNKSVSFLNLNYEGDSDSSNSSEKIQK 488
BLAST of IVF0014954 vs. NCBI nr
Match:
TYK29576.1 (hypothetical protein E5676_scaffold655G001820 [Cucumis melo var. makuwa])
HSP 1 Score: 243 bits (619), Expect = 3.63e-73
Identity = 119/164 (72.56%), Postives = 140/164 (85.37%), Query Frame = 0
Query: 1 MSAFVQIGEACGGFIEAAPETVDKAELTEALIKVKDNYTMFLPAFIKIYDEEGSDFTIHT 60
++ F+QIGEA GGFI+AAPE+V+K ELTEALIKVK+NYT FLPAFI+I+DEEG DF I T
Sbjct: 294 LNTFIQIGEAYGGFIDAAPESVNKLELTEALIKVKENYTGFLPAFIQIHDEEGHDFIIQT 353
Query: 61 ITHPEGRWLRERNPGIHGSFTRNAAEIFNEYNPYAEQYTFDRNLAVISQKDSSETSKSRN 120
+THP+G+WLRERNP IHGSFT+ AAE FNE+NPYAEQYTF RNLAVI++ D E+SK +
Sbjct: 354 VTHPKGKWLRERNPSIHGSFTKTAAENFNEFNPYAEQYTFRRNLAVIAKPDLPESSKKGS 413
Query: 121 NKMNTRRKTGPTKMNKKFNKAVSFLNLNYEGDSDNSNLSEKVKK 164
+MN RK GPTK KKFNK VSFLNLNYEGDSDNSN SEK++K
Sbjct: 414 KQMNNDRKMGPTKTIKKFNKTVSFLNLNYEGDSDNSNSSEKIQK 457
BLAST of IVF0014954 vs. NCBI nr
Match:
KAA0044449.1 (hypothetical protein E6C27_scaffold46G001820 [Cucumis melo var. makuwa])
HSP 1 Score: 243 bits (619), Expect = 7.66e-72
Identity = 119/164 (72.56%), Postives = 140/164 (85.37%), Query Frame = 0
Query: 1 MSAFVQIGEACGGFIEAAPETVDKAELTEALIKVKDNYTMFLPAFIKIYDEEGSDFTIHT 60
++ F+QIGEA GGFI+AAPE+V+K ELTEALIKVK+NYT FLPAFI+I+DEEG DF I T
Sbjct: 294 LNTFIQIGEAYGGFIDAAPESVNKLELTEALIKVKENYTGFLPAFIQIHDEEGHDFIIQT 353
Query: 61 ITHPEGRWLRERNPGIHGSFTRNAAEIFNEYNPYAEQYTFDRNLAVISQKDSSETSKSRN 120
+THP+G+WLRERNP IHGSFT+ AAE FNE+NPYAEQYTF RNLAVI++ D E+SK +
Sbjct: 354 VTHPKGKWLRERNPSIHGSFTKTAAENFNEFNPYAEQYTFRRNLAVIAKPDLPESSKKGS 413
Query: 121 NKMNTRRKTGPTKMNKKFNKAVSFLNLNYEGDSDNSNLSEKVKK 164
+MN RK GPTK KKFNK VSFLNLNYEGDSDNSN SEK++K
Sbjct: 414 KQMNNDRKMGPTKTIKKFNKTVSFLNLNYEGDSDNSNSSEKIQK 457
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5D3CR17 | 9.0e-79 | 96.20 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A5D3DFT7 | 1.1e-63 | 78.66 | Mitotic spindle checkpoint protein mad1 OS=Cucumis melo var. makuwa OX=1194695 G... | [more] |
| A0A5D3DLT1 | 8.5e-61 | 71.34 | DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... | [more] |
| A0A5D3E0Y8 | 5.5e-60 | 72.56 | DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... | [more] |
| A0A5A7TTA1 | 5.5e-60 | 72.56 | DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| TYK13812.1 | 2.45e-101 | 96.20 | hypothetical protein E5676_scaffold488G00750 [Cucumis melo var. makuwa] | [more] |
| KAA0055409.1 | 1.31e-83 | 78.66 | mitotic spindle checkpoint protein mad1 [Cucumis melo var. makuwa] >TYK22318.1 m... | [more] |
| KAA0039949.1 | 5.92e-74 | 71.34 | hypothetical protein E6C27_scaffold122G002290 [Cucumis melo var. makuwa] >TYK245... | [more] |
| TYK29576.1 | 3.63e-73 | 72.56 | hypothetical protein E5676_scaffold655G001820 [Cucumis melo var. makuwa] | [more] |
| KAA0044449.1 | 7.66e-72 | 72.56 | hypothetical protein E6C27_scaffold46G001820 [Cucumis melo var. makuwa] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
