IVF0014933 (gene) Melon (IVF77) v1

Overview
NameIVF0014933
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Locationchr01: 30250681 .. 30251298 (-)
RNA-Seq ExpressionIVF0014933
SyntenyIVF0014933
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAATGACTCCTTTGCTCAGACATGTAGCTGAGCAACTGGTCAAATCGATTTCGTTCCACCTAGTGTTGGGAAGAAGAAAGAAAGGAGATGGACAACCACCTGTATCAGGTTGGAGATGAACAATCCACCCGTATCAGGTTGAAGATTTGTTACGTTCGCAAGGATATATGTGGGCAGTATTCATTTTTATAGTCTGTTCTGTGCCAGTATTCATTTTTATAGTCTGTTCTGTGCCCTCATATTTCGTACAAACACTTCATCATGTACTTTGTTTTCTTATTTGAAGCAGACATTTCCAAATCTTTTGTAACAGAGGATTCACCCGAATGCTCGGCCTCAAAGCTTCGACATTTTGCAGCAGTGATATTTACTTTGAAGGTCAAGAGGTCTGAATTTGTATCATTTTGTTGTCATCTTTATTTACAAAGTATAAGCTTAATGTTTCAATTTCAAAATGGTTTCATTAGGAAAGTTGTGGGTTATAGTCTGCAAGTTAGTCTTTCAATTTTAAGCCTTCATTATTGACTTTTAGAAATATGGAGACAATTTGTCCAATGCTGATGACAACAACAGGCACCGGGAAAGAAGATCACATATATAAATTAATTGAGTAG

mRNA sequence

ATGAAAATGACTCCTTTGCTCAGACATGTAGCTGAGCAACTGGTCAAATCGATTTCGTTCCACCTAGTGTTGGGAAGAAGAAAGAAAGGAGATGGACAACCACCTGTATCAGCAGACATTTCCAAATCTTTTGTAACAGAGGATTCACCCGAATGCTCGGCCTCAAAGCTTCGACATTTTGCAGCAGTGATATTTACTTTGAAGGTCAAGAGAAATATGGAGACAATTTGTCCAATGCTGATGACAACAACAGGCACCGGGAAAGAAGATCACATATATAAATTAATTGAGTAG

Coding sequence (CDS)

ATGAAAATGACTCCTTTGCTCAGACATGTAGCTGAGCAACTGGTCAAATCGATTTCGTTCCACCTAGTGTTGGGAAGAAGAAAGAAAGGAGATGGACAACCACCTGTATCAGCAGACATTTCCAAATCTTTTGTAACAGAGGATTCACCCGAATGCTCGGCCTCAAAGCTTCGACATTTTGCAGCAGTGATATTTACTTTGAAGGTCAAGAGAAATATGGAGACAATTTGTCCAATGCTGATGACAACAACAGGCACCGGGAAAGAAGATCACATATATAAATTAATTGAGTAG

Protein sequence

MKMTPLLRHVAEQLVKSISFHLVLGRRKKGDGQPPVSADISKSFVTEDSPECSASKLRHFAAVIFTLKVKRNMETICPMLMTTTGTGKEDHIYKLIE
Homology
[Close]
BLAST of IVF0014933 vs. ExPASy TrEMBL
Match: A0A0A0K6J2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G426540 PE=4 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 4.3e-36
Identity = 81/97 (83.51%), Postives = 88/97 (90.72%), Query Frame = 0 

Query: 1  MKMTPLLRHVAEQLVKSISFHLVLGRRKKGDGQPPVSADISKSFVTEDSPECSASKLRHF 60
          MKMTPLLR+VAEQL KSI   L+LG RKKGDGQPPVSAD+ +SFVTEDSPECSASKLRHF
Sbjct: 1  MKMTPLLRNVAEQLAKSIWIDLMLGSRKKGDGQPPVSADMYQSFVTEDSPECSASKLRHF 60

Query: 61 AAVIFTLKVKRNMETICPMLMTTTGTGKEDHIYKLIE 98
          AAV+ T+K+KRNMETICPMLM TTGTGKEDH YKLIE
Sbjct: 61 AAVLSTMKIKRNMETICPMLM-TTGTGKEDHKYKLIE 96

[Close]
BLAST of IVF0014933 vs. NCBI nr
Match: KGN45113.1 (hypothetical protein Csa_016805 [Cucumis sativus])

HSP 1 Score: 160 bits (405), Expect = 5.79e-49
Identity = 81/97 (83.51%), Postives = 88/97 (90.72%), Query Frame = 0 

Query: 1  MKMTPLLRHVAEQLVKSISFHLVLGRRKKGDGQPPVSADISKSFVTEDSPECSASKLRHF 60
          MKMTPLLR+VAEQL KSI   L+LG RKKGDGQPPVSAD+ +SFVTEDSPECSASKLRHF
Sbjct: 1  MKMTPLLRNVAEQLAKSIWIDLMLGSRKKGDGQPPVSADMYQSFVTEDSPECSASKLRHF 60

Query: 61 AAVIFTLKVKRNMETICPMLMTTTGTGKEDHIYKLIE 97
          AAV+ T+K+KRNMETICPMLMTT GTGKEDH YKLIE
Sbjct: 61 AAVLSTMKIKRNMETICPMLMTT-GTGKEDHKYKLIE 96

The following BLAST results are available for this feature:
BLAST of IVF0014933 vs.
Match NameE-valueIdentityDescription
BLAST of IVF0014933 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K6J24.3e-3683.51Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G426540 PE=4 SV=1[more]
BLAST of IVF0014933 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN45113.15.79e-4983.51hypothetical protein Csa_016805 [Cucumis sativus][more]
BLAST of IVF0014933 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0014933.1IVF0014933.1mRNA